Carg27175 (gene) Silver-seed gourd | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Carg27175
Type	gene
Organism	Cucurbita argyrosperma (Silver-seed gourd)
Description	MYB transcription factor
Location	Cucurbita_argyrosperma_scaffold_260 : 137772 .. 138957 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

CCTCTTCTTCTTCCTCTTCCTCTTTCGGGTTCGCGATGGGACGATCCCCGTGCTGCGAGAAAGCCCACACGAACAAAGGCGCGTGGACCAAAGACGAAGATCAACGCCTCATCGACTACATCCGCCTCCACGGTGAGGGCTGTTGGCGTACCCTCCCTAAGGCTGCTGGTACCATCATCATCATCATCATCATATACCCTTTTCTCTCGTCCCCATTCATTCACTAATTCGATTTGGGTTTCAGGGTTGCTTCGATGTGGAAAAAGTTGCAGGCTTCGATGGATCAATTATCTTCGCCCTGATCTCAAACGAGGCAATTTCACTCAAGATGAAGACGAACTCATCATCAAACTTCATAGCCTTCTTGGAAACAAGTCAGTAATTTCCCATAATTTTCCGTTCTTTTGTTATTGAGATTGTTGAGAATTGAGAATTGTTGGGACCGAGTTACACATTGACTAATTTAGGGAATGATCCTGAGTTTTAAGTAAGGAATACAGCTCAAAATGAACAATATCGTGTCATTGTGGAGATTCGTGATTCCTAAAGATTTGTTTGATGTAATTCTGATTTGGGTTTTTTTTGTTTCGAATTTTGGTAATTTAGATGGTCGGTGATTGCGGGTCGCTTACCGGGAAGAACAGACAATGAAATCAAAAACTATTGGAACACTCACATCAAGAGGAAACTCATTAGCCGTGGCATTGATCCACAAACCCACCGCCCTCTCAACGAACCCACCGCCGTCTCCACCCGTTTGCCTTACCGGAATCCCAACAATTCATCATCTTCCTCCTCCTCTGTTCCAACAGCAGAGCTTCCAATTCCCAAGCCAGCAACAATCAACGTGCAGTCATCGGAAGTAGACGAAGAAGGCAGCGGCACGACAACGGAGATGGAGCCGCCGCTGCCTACGGCAGCATCCACGGCGGAAGCCCATGTGAAGACAGAGTTGAATTTGGAGCTCTCAATTGGGTTGCAGCCATTTCAGGCGGAGGCAACAAGGGGGTCTCCGGGGAGCTCGGCGGAGTCGAGATTGAGAGATAGAAGGTCGTTCGGGTCGGTGTGCTTGTGCTGGCAATTGGGGTCGGAGAACAGCGGCGGCGGCGGCGAGTGTTGCCGGAATTGCGAGAGCTCATATGGGTGGGTGTTTGGGATCCGGGCAAGTGCTCTGGGTTCTTCATAG

mRNA sequence

CCTCTTCTTCTTCCTCTTCCTCTTTCGGGTTCGCGATGGGACGATCCCCGTGCTGCGAGAAAGCCCACACGAACAAAGGCGCGTGGACCAAAGACGAAGATCAACGCCTCATCGACTACATCCGCCTCCACGGTGAGGGCTGTTGGCGTACCCTCCCTAAGGCTGCTGGGTTGCTTCGATGTGGAAAAAGTTGCAGGCTTCGATGGATCAATTATCTTCGCCCTGATCTCAAACGAGGCAATTTCACTCAAGATGAAGACGAACTCATCATCAAACTTCATAGCCTTCTTGGAAACAAATGGTCGGTGATTGCGGGTCGCTTACCGGGAAGAACAGACAATGAAATCAAAAACTATTGGAACACTCACATCAAGAGGAAACTCATTAGCCGTGGCATTGATCCACAAACCCACCGCCCTCTCAACGAACCCACCGCCGTCTCCACCCGTTTGCCTTACCGGAATCCCAACAATTCATCATCTTCCTCCTCCTCTGTTCCAACAGCAGAGCTTCCAATTCCCAAGCCAGCAACAATCAACGTGCAGTCATCGGAAGTAGACGAAGAAGGCAGCGGCACGACAACGGAGATGGAGCCGCCGCTGCCTACGGCAGCATCCACGGCGGAAGCCCATGTGAAGACAGAGTTGAATTTGGAGCTCTCAATTGGGTTGCAGCCATTTCAGGCGGAGGCAACAAGGGGGTCTCCGGGGAGCTCGGCGGAGTCGAGATTGAGAGATAGAAGGTCGTTCGGGTCGGTGTGCTTGTGCTGGCAATTGGGGTCGGAGAACAGCGGCGGCGGCGGCGAGTGTTGCCGGAATTGCGAGAGCTCATATGGGTGGGTGTTTGGGATCCGGGCAAGTGCTCTGGGTTCTTCATAG

Coding sequence (CDS)

ATGGGACGATCCCCGTGCTGCGAGAAAGCCCACACGAACAAAGGCGCGTGGACCAAAGACGAAGATCAACGCCTCATCGACTACATCCGCCTCCACGGTGAGGGCTGTTGGCGTACCCTCCCTAAGGCTGCTGGGTTGCTTCGATGTGGAAAAAGTTGCAGGCTTCGATGGATCAATTATCTTCGCCCTGATCTCAAACGAGGCAATTTCACTCAAGATGAAGACGAACTCATCATCAAACTTCATAGCCTTCTTGGAAACAAATGGTCGGTGATTGCGGGTCGCTTACCGGGAAGAACAGACAATGAAATCAAAAACTATTGGAACACTCACATCAAGAGGAAACTCATTAGCCGTGGCATTGATCCACAAACCCACCGCCCTCTCAACGAACCCACCGCCGTCTCCACCCGTTTGCCTTACCGGAATCCCAACAATTCATCATCTTCCTCCTCCTCTGTTCCAACAGCAGAGCTTCCAATTCCCAAGCCAGCAACAATCAACGTGCAGTCATCGGAAGTAGACGAAGAAGGCAGCGGCACGACAACGGAGATGGAGCCGCCGCTGCCTACGGCAGCATCCACGGCGGAAGCCCATGTGAAGACAGAGTTGAATTTGGAGCTCTCAATTGGGTTGCAGCCATTTCAGGCGGAGGCAACAAGGGGGTCTCCGGGGAGCTCGGCGGAGTCGAGATTGAGAGATAGAAGGTCGTTCGGGTCGGTGTGCTTGTGCTGGCAATTGGGGTCGGAGAACAGCGGCGGCGGCGGCGAGTGTTGCCGGAATTGCGAGAGCTCATATGGGTGGGTGTTTGGGATCCGGGCAAGTGCTCTGGGTTCTTCATAG

Protein sequence

MGRSPCCEKAHTNKGAWTKDEDQRLIDYIRLHGEGCWRTLPKAAGLLRCGKSCRLRWINYLRPDLKRGNFTQDEDELIIKLHSLLGNKWSVIAGRLPGRTDNEIKNYWNTHIKRKLISRGIDPQTHRPLNEPTAVSTRLPYRNPNNSSSSSSSVPTAELPIPKPATINVQSSEVDEEGSGTTTEMEPPLPTAASTAEAHVKTELNLELSIGLQPFQAEATRGSPGSSAESRLRDRRSFGSVCLCWQLGSENSGGGGECCRNCESSYGWVFGIRASALGSS

Homology

[Close]

BLAST of Carg27175 vs. NCBI nr
Match: XP_022925370.1 (transcription factor MYB8-like [Cucurbita moschata])

HSP 1 Score: 433.0 bits (1112), Expect = 8.0e-118
Identity = 279/280 (99.64%), Postives = 280/280 (100.00%), Query Frame = 0


Query: 1   MGRSPCCEKAHTNKGAWTKDEDQRLIDYIRLHGEGCWRTLPKAAGLLRCGKSCRLRWINY 60
           MGRSPCCEKAHTNKGAWTKDEDQRLIDYIRLHGEGCWRTLPKAAGLLRCGKSCRLRWINY
Sbjct: 1   MGRSPCCEKAHTNKGAWTKDEDQRLIDYIRLHGEGCWRTLPKAAGLLRCGKSCRLRWINY 60

Query: 61  LRPDLKRGNFTQDEDELIIKLHSLLGNKWSVIAGRLPGRTDNEIKNYWNTHIKRKLISRG 120
           LRPDLKRGNFTQDEDELIIKLHSLLGNKWSVIAGRLPGRTDNEIKNYWNTHIKRKLISRG
Sbjct: 61  LRPDLKRGNFTQDEDELIIKLHSLLGNKWSVIAGRLPGRTDNEIKNYWNTHIKRKLISRG 120

Query: 121 IDPQTHRPLNEPTAVSTRLPYRNPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 180
           IDPQTHRPLNEPTAVSTRLPYRNPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 121 IDPQTHRPLNEPTAVSTRLPYRNPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 180

Query: 181 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLQPFQAEATRGSPGSSAESRLRDRRSFGS 240
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLQPFQAEATRGSPGSSAESRLRDRRSFGS
Sbjct: 181 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLQPFQAEATRGSPGSSAESRLRDRRSFGS 240

Query: 241 VCLCWQLGSENSGGGGECCRNCESSYGWVFGIRASALGSS 281
           VC+CWQLGSENSGGGGECCRNCESSYGWVFGIRASALGSS
Sbjct: 241 VCICWQLGSENSGGGGECCRNCESSYGWVFGIRASALGSS 280

[Close]

BLAST of Carg27175 vs. NCBI nr
Match: XP_023535357.1 (transcription factor MYB8-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 429.9 bits (1104), Expect = 6.8e-117
Identity = 279/280 (99.64%), Postives = 279/280 (99.64%), Query Frame = 0


Query: 1   MGRSPCCEKAHTNKGAWTKDEDQRLIDYIRLHGEGCWRTLPKAAGLLRCGKSCRLRWINY 60
           MGRSPCCEKAHTNKGAWTKDEDQRLIDYIRLHGEGCWRTLPKAAGLLRCGKSCRLRWINY
Sbjct: 1   MGRSPCCEKAHTNKGAWTKDEDQRLIDYIRLHGEGCWRTLPKAAGLLRCGKSCRLRWINY 60

Query: 61  LRPDLKRGNFTQDEDELIIKLHSLLGNKWSVIAGRLPGRTDNEIKNYWNTHIKRKLISRG 120
           LRPDLKRGNFTQDEDELIIKLHSLLGNKWSVIAGRLPGRTDNEIKNYWNTHIKRKLISRG
Sbjct: 61  LRPDLKRGNFTQDEDELIIKLHSLLGNKWSVIAGRLPGRTDNEIKNYWNTHIKRKLISRG 120

Query: 121 IDPQTHRPLNEPTAVSTRLPYRNPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 180
           IDPQTHRPLNEPTAVSTRLPYRNPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 121 IDPQTHRPLNEPTAVSTRLPYRNPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 180

Query: 181 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLQPFQAEATRGSPGSSAESRLRDRRSFGS 240
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLQPFQAEATRGS GSSAESRLRDRRSFGS
Sbjct: 181 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLQPFQAEATRGSLGSSAESRLRDRRSFGS 240

Query: 241 VCLCWQLGSENSGGGGECCRNCESSYGWVFGIRASALGSS 281
           VCLCWQLGSENSGGGGECCRNCESSYGWVFGIRASALGSS
Sbjct: 241 VCLCWQLGSENSGGGGECCRNCESSYGWVFGIRASALGSS 280

[Close]

BLAST of Carg27175 vs. NCBI nr
Match: XP_022973987.1 (transcription factor MYB8-like [Cucurbita maxima])

HSP 1 Score: 428.3 bits (1100), Expect = 2.0e-116
Identity = 275/280 (98.21%), Postives = 276/280 (98.57%), Query Frame = 0


Query: 1   MGRSPCCEKAHTNKGAWTKDEDQRLIDYIRLHGEGCWRTLPKAAGLLRCGKSCRLRWINY 60
           MGRSPCCEKAHTNKGAWTKDEDQRLIDYIRLHGEGCWRTLPKAAGLLRCGKSCRLRWINY
Sbjct: 1   MGRSPCCEKAHTNKGAWTKDEDQRLIDYIRLHGEGCWRTLPKAAGLLRCGKSCRLRWINY 60

Query: 61  LRPDLKRGNFTQDEDELIIKLHSLLGNKWSVIAGRLPGRTDNEIKNYWNTHIKRKLISRG 120
           LRPDLKRGNFTQDEDELIIKLHSLLGNKWSVIAGRLPGRTDNEIKNYWNTHIKRKLISRG
Sbjct: 61  LRPDLKRGNFTQDEDELIIKLHSLLGNKWSVIAGRLPGRTDNEIKNYWNTHIKRKLISRG 120

Query: 121 IDPQTHRPLNEPTAVSTRLPYRNPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 180
           IDPQTHRPLNEPTAV+TRLPYRNP    XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 121 IDPQTHRPLNEPTAVTTRLPYRNP----XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 180

Query: 181 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLQPFQAEATRGSPGSSAESRLRDRRSFGS 240
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLQPFQAEATRGSPGSSAESRLRDRRSFGS
Sbjct: 181 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLQPFQAEATRGSPGSSAESRLRDRRSFGS 240

Query: 241 VCLCWQLGSENSGGGGECCRNCESSYGWVFGIRASALGSS 281
           VCLCWQLGSENSGGGGECCRNCESSYGWVFGIRASALGSS
Sbjct: 241 VCLCWQLGSENSGGGGECCRNCESSYGWVFGIRASALGSS 276

[Close]

BLAST of Carg27175 vs. NCBI nr
Match: XP_022948307.1 (transcription repressor MYB6-like [Cucurbita moschata])

HSP 1 Score: 357.5 bits (916), Expect = 4.3e-95
Identity = 203/285 (71.23%), Postives = 214/285 (75.09%), Query Frame = 0


Query: 1   MGRSPCCEKAHTNKGAWTKDEDQRLIDYIRLHGEGCWRTLPKAAGLLRCGKSCRLRWINY 60
           MGRSPCCEKAHTNKGAWTKDEDQRL+DYIRLHGEGCWRTLPKAAGLLRCGKSCRLRWINY
Sbjct: 1   MGRSPCCEKAHTNKGAWTKDEDQRLVDYIRLHGEGCWRTLPKAAGLLRCGKSCRLRWINY 60

Query: 61  LRPDLKRGNFTQDEDELIIKLHSLLGNKWSVIAGRLPGRTDNEIKNYWNTHIKRKLISRG 120
           LRPDLKRGNFT +EDELI+KLHSLLGNKWSVIAGRLPGRTDNEIKNYWNTHIKRKLISRG
Sbjct: 61  LRPDLKRGNFTDEEDELIVKLHSLLGNKWSVIAGRLPGRTDNEIKNYWNTHIKRKLISRG 120

Query: 121 IDPQTHRPLNEPTAVSTRLPYRN---PXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 180
           IDPQTHRPLNE  AVSTR  Y N   PXXXXXXXXXXXXXXXXXXXXX            
Sbjct: 121 IDPQTHRPLNESAAVSTRFGYLNHEYPXXXXXXXXXXXXXXXXXXXXXELPIMKPTIINA 180

Query: 181 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLQPFQAEATRGSPGSSAESRLRDRRS 240
                                             L PFQ E  RGSP SSAESRLR+R  
Sbjct: 181 PSLDIDEEGSGTTTETEPAATHVKTEVNLELSIGLHPFQGETARGSPRSSAESRLRERSP 240

Query: 241 F--GSVCLCWQLGSENSGGGGECCRNCESSYGWVFGIRASALGSS 281
           +  GS+CLC QLGS+N   GGEC RNC++S GW+FG+R SALGSS
Sbjct: 241 YQLGSLCLCCQLGSDN---GGECRRNCQNSKGWLFGVRPSALGSS 282

[Close]

BLAST of Carg27175 vs. NCBI nr
Match: XP_022998629.1 (transcription factor MYB8-like [Cucurbita maxima])

HSP 1 Score: 357.5 bits (916), Expect = 4.3e-95
Identity = 196/282 (69.50%), Postives = 206/282 (73.05%), Query Frame = 0


Query: 1   MGRSPCCEKAHTNKGAWTKDEDQRLIDYIRLHGEGCWRTLPKAAGLLRCGKSCRLRWINY 60
           MGRSPCCEKAHTNKGAWTKDEDQRL+DYIRLHGEGCWRTLPKAAGLLRCGKSCRLRWINY
Sbjct: 1   MGRSPCCEKAHTNKGAWTKDEDQRLVDYIRLHGEGCWRTLPKAAGLLRCGKSCRLRWINY 60

Query: 61  LRPDLKRGNFTQDEDELIIKLHSLLGNKWSVIAGRLPGRTDNEIKNYWNTHIKRKLISRG 120
           LRPDLKRGNFT +EDELI+KLHSLLGNKWSVIAGRLPGRTDNEIKNYWNTHIKRKLISRG
Sbjct: 61  LRPDLKRGNFTDEEDELIVKLHSLLGNKWSVIAGRLPGRTDNEIKNYWNTHIKRKLISRG 120

Query: 121 IDPQTHRPLNEPTAVSTRLPYRNPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 180
           IDPQTHRPLNE  AVSTR  Y N       XXXXXXXXXXXXXX                
Sbjct: 121 IDPQTHRPLNESAAVSTRFGYLN--HEYPNXXXXXXXXXXXXXXAELPIMKPTIINAPSL 180

Query: 181 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLQPFQAEATRGSPGSSAESRLRDRR--SF 240
                                          L PFQ E  RGSP SSAESRLR+R    F
Sbjct: 181 DIDEEGSGTTTETEPAATHVKTEVNLELSIGLHPFQGETARGSPRSSAESRLRERSPYQF 240

Query: 241 GSVCLCWQLGSENSGGGGECCRNCESSYGWVFGIRASALGSS 281
           GS+CLC QLGS+N   GGEC RNC++S GW+FG+R SALGSS
Sbjct: 241 GSLCLCCQLGSDN---GGECRRNCQNSKGWLFGVRPSALGSS 277

[Close]

BLAST of Carg27175 vs. TAIR10
Match: AT4G09460.1 (myb domain protein 6)

HSP 1 Score: 276.2 bits (705), Expect = 2.3e-74
Identity = 120/139 (86.33%), Postives = 132/139 (94.96%), Query Frame = 0


Query: 1   MGRSPCCEKAHTNKGAWTKDEDQRLIDYIRLHGEGCWRTLPKAAGLLRCGKSCRLRWINY 60
           MGRSPCCEKAHTNKGAWTK+EDQRL+DYIR HGEGCWR+LPK+AGLLRCGKSCRLRWINY
Sbjct: 1   MGRSPCCEKAHTNKGAWTKEEDQRLVDYIRNHGEGCWRSLPKSAGLLRCGKSCRLRWINY 60

Query: 61  LRPDLKRGNFTQDEDELIIKLHSLLGNKWSVIAGRLPGRTDNEIKNYWNTHIKRKLISRG 120
           LRPDLKRGNFT DED++IIKLHSLLGNKWS+IAGRLPGRTDNEIKNYWNTHIKRKL+S G
Sbjct: 61  LRPDLKRGNFTDDEDQIIIKLHSLLGNKWSLIAGRLPGRTDNEIKNYWNTHIKRKLLSHG 120

Query: 121 IDPQTHRPLNEPTAVSTRL 140
           IDPQTHR +NE   VS+++
Sbjct: 121 IDPQTHRQINESKTVSSQV 139

[Close]

BLAST of Carg27175 vs. TAIR10
Match: AT4G38620.1 (myb domain protein 4)

HSP 1 Score: 269.6 bits (688), Expect = 2.1e-72
Identity = 117/140 (83.57%), Postives = 130/140 (92.86%), Query Frame = 0


Query: 1   MGRSPCCEKAHTNKGAWTKDEDQRLIDYIRLHGEGCWRTLPKAAGLLRCGKSCRLRWINY 60
           MGRSPCCEKAHTNKGAWTK+ED+RL+ YI+ HGEGCWR+LPKAAGLLRCGKSCRLRWINY
Sbjct: 1   MGRSPCCEKAHTNKGAWTKEEDERLVAYIKAHGEGCWRSLPKAAGLLRCGKSCRLRWINY 60

Query: 61  LRPDLKRGNFTQDEDELIIKLHSLLGNKWSVIAGRLPGRTDNEIKNYWNTHIKRKLISRG 120
           LRPDLKRGNFT++EDELIIKLHSLLGNKWS+IAGRLPGRTDNEIKNYWNTHI+RKLI+RG
Sbjct: 61  LRPDLKRGNFTEEEDELIIKLHSLLGNKWSLIAGRLPGRTDNEIKNYWNTHIRRKLINRG 120

Query: 121 IDPQTHRPLNEPTAVSTRLP 141
           IDP +HRP+ E +A     P
Sbjct: 121 IDPTSHRPIQESSASQDSKP 140

[Close]

BLAST of Carg27175 vs. TAIR10
Match: AT1G22640.1 (myb domain protein 3)

HSP 1 Score: 263.1 bits (671), Expect = 2.0e-70
Identity = 114/131 (87.02%), Postives = 125/131 (95.42%), Query Frame = 0


Query: 1   MGRSPCCEKAHTNKGAWTKDEDQRLIDYIRLHGEGCWRTLPKAAGLLRCGKSCRLRWINY 60
           MGRSPCCEKAH NKGAWTK+EDQ L+DYIR HGEGCWR+LP+AAGL RCGKSCRLRW+NY
Sbjct: 1   MGRSPCCEKAHMNKGAWTKEEDQLLVDYIRKHGEGCWRSLPRAAGLQRCGKSCRLRWMNY 60

Query: 61  LRPDLKRGNFTQDEDELIIKLHSLLGNKWSVIAGRLPGRTDNEIKNYWNTHIKRKLISRG 120
           LRPDLKRGNFT++EDELIIKLHSLLGNKWS+IAGRLPGRTDNEIKNYWNTHIKRKL+SRG
Sbjct: 61  LRPDLKRGNFTEEEDELIIKLHSLLGNKWSLIAGRLPGRTDNEIKNYWNTHIKRKLLSRG 120

Query: 121 IDPQTHRPLNE 132
           IDP +HR +NE
Sbjct: 121 IDPNSHRLINE 131

[Close]

BLAST of Carg27175 vs. TAIR10
Match: AT2G16720.1 (myb domain protein 7)

HSP 1 Score: 261.5 bits (667), Expect = 5.8e-70
Identity = 113/131 (86.26%), Postives = 123/131 (93.89%), Query Frame = 0


Query: 1   MGRSPCCEKAHTNKGAWTKDEDQRLIDYIRLHGEGCWRTLPKAAGLLRCGKSCRLRWINY 60
           MGRSPCCEK H NKGAWTK+ED+RL+ YI+ HGEGCWR+LP+AAGLLRCGKSCRLRWINY
Sbjct: 1   MGRSPCCEKEHMNKGAWTKEEDERLVSYIKSHGEGCWRSLPRAAGLLRCGKSCRLRWINY 60

Query: 61  LRPDLKRGNFTQDEDELIIKLHSLLGNKWSVIAGRLPGRTDNEIKNYWNTHIKRKLISRG 120
           LRPDLKRGNFT DEDELIIKLHSLLGNKWS+IA RLPGRTDNEIKNYWNTHIKRKL+S+G
Sbjct: 61  LRPDLKRGNFTHDEDELIIKLHSLLGNKWSLIAARLPGRTDNEIKNYWNTHIKRKLLSKG 120

Query: 121 IDPQTHRPLNE 132
           IDP THR +NE
Sbjct: 121 IDPATHRGINE 131

[Close]

BLAST of Carg27175 vs. TAIR10
Match: AT4G34990.1 (myb domain protein 32)

HSP 1 Score: 255.8 bits (652), Expect = 3.2e-68
Identity = 109/131 (83.21%), Postives = 122/131 (93.13%), Query Frame = 0


Query: 1   MGRSPCCEKAHTNKGAWTKDEDQRLIDYIRLHGEGCWRTLPKAAGLLRCGKSCRLRWINY 60
           MGRSPCCEK HTNKGAWTK+ED +LI YI+ HGEGCWR+LP++AGL RCGKSCRLRWINY
Sbjct: 1   MGRSPCCEKDHTNKGAWTKEEDDKLISYIKAHGEGCWRSLPRSAGLQRCGKSCRLRWINY 60

Query: 61  LRPDLKRGNFTQDEDELIIKLHSLLGNKWSVIAGRLPGRTDNEIKNYWNTHIKRKLISRG 120
           LRPDLKRGNFT +ED+LIIKLHSLLGNKWS+IA RLPGRTDNEIKNYWNTH+KRKL+ +G
Sbjct: 61  LRPDLKRGNFTLEEDDLIIKLHSLLGNKWSLIATRLPGRTDNEIKNYWNTHVKRKLLRKG 120

Query: 121 IDPQTHRPLNE 132
           IDP THRP+NE
Sbjct: 121 IDPATHRPINE 131

[Close]

BLAST of Carg27175 vs. Swiss-Prot
Match: sp|P81395|MYB30_ANTMA (Myb-related protein 330 OS=Antirrhinum majus OX=4151 GN=MYB330 PE=2 SV=1)

HSP 1 Score: 278.5 bits (711), Expect = 8.2e-74
Identity = 123/143 (86.01%), Postives = 132/143 (92.31%), Query Frame = 0


Query: 1   MGRSPCCEKAHTNKGAWTKDEDQRLIDYIRLHGEGCWRTLPKAAGLLRCGKSCRLRWINY 60
           MGRSPCCEKAHTNKGAWTK+EDQRLI+YIR HGEGCWR+LPKAAGLLRCGKSCRLRWINY
Sbjct: 1   MGRSPCCEKAHTNKGAWTKEEDQRLINYIRAHGEGCWRSLPKAAGLLRCGKSCRLRWINY 60

Query: 61  LRPDLKRGNFTQDEDELIIKLHSLLGNKWSVIAGRLPGRTDNEIKNYWNTHIKRKLISRG 120
           LRPDLKRGNFT++EDE+IIKLHSLLGNKWS+IAG LPGRTDNEIKNYWNTHIKRKL+SRG
Sbjct: 61  LRPDLKRGNFTEEEDEIIIKLHSLLGNKWSLIAGALPGRTDNEIKNYWNTHIKRKLVSRG 120

Query: 121 IDPQTHRPLNEPTAVSTRLPYRN 144
           IDPQTHR LN  T  +T  P  N
Sbjct: 121 IDPQTHRSLNSATTTATATPTVN 143

[Close]

BLAST of Carg27175 vs. Swiss-Prot
Match: sp|Q38851|MYB6_ARATH (Transcription repressor MYB6 OS=Arabidopsis thaliana OX=3702 GN=MYB6 PE=1 SV=1)

HSP 1 Score: 276.2 bits (705), Expect = 4.1e-73
Identity = 120/139 (86.33%), Postives = 132/139 (94.96%), Query Frame = 0


Query: 1   MGRSPCCEKAHTNKGAWTKDEDQRLIDYIRLHGEGCWRTLPKAAGLLRCGKSCRLRWINY 60
           MGRSPCCEKAHTNKGAWTK+EDQRL+DYIR HGEGCWR+LPK+AGLLRCGKSCRLRWINY
Sbjct: 1   MGRSPCCEKAHTNKGAWTKEEDQRLVDYIRNHGEGCWRSLPKSAGLLRCGKSCRLRWINY 60

Query: 61  LRPDLKRGNFTQDEDELIIKLHSLLGNKWSVIAGRLPGRTDNEIKNYWNTHIKRKLISRG 120
           LRPDLKRGNFT DED++IIKLHSLLGNKWS+IAGRLPGRTDNEIKNYWNTHIKRKL+S G
Sbjct: 61  LRPDLKRGNFTDDEDQIIIKLHSLLGNKWSLIAGRLPGRTDNEIKNYWNTHIKRKLLSHG 120

Query: 121 IDPQTHRPLNEPTAVSTRL 140
           IDPQTHR +NE   VS+++
Sbjct: 121 IDPQTHRQINESKTVSSQV 139

[Close]

BLAST of Carg27175 vs. Swiss-Prot
Match: sp|P81393|MYB08_ANTMA (Myb-related protein 308 OS=Antirrhinum majus OX=4151 GN=MYB308 PE=2 SV=1)

HSP 1 Score: 270.4 bits (690), Expect = 2.2e-71
Identity = 118/134 (88.06%), Postives = 128/134 (95.52%), Query Frame = 0


Query: 1   MGRSPCCEKAHTNKGAWTKDEDQRLIDYIRLHGEGCWRTLPKAAGLLRCGKSCRLRWINY 60
           MGRSPCCEKAHTNKGAWTK+ED RL+ YIR HGEGCWR+LPKAAGLLRCGKSCRLRWINY
Sbjct: 1   MGRSPCCEKAHTNKGAWTKEEDDRLVAYIRAHGEGCWRSLPKAAGLLRCGKSCRLRWINY 60

Query: 61  LRPDLKRGNFTQDEDELIIKLHSLLGNKWSVIAGRLPGRTDNEIKNYWNTHIKRKLISRG 120
           LRPDLKRGNFT++EDELIIKLHSLLGNKWS+IAGRLPGRTDNEIKNYWNTHI+RKL+SRG
Sbjct: 61  LRPDLKRGNFTEEEDELIIKLHSLLGNKWSLIAGRLPGRTDNEIKNYWNTHIRRKLLSRG 120

Query: 121 IDPQTHRPLNEPTA 135
           IDP THR +N+ TA
Sbjct: 121 IDPTTHRSINDGTA 134

[Close]

BLAST of Carg27175 vs. Swiss-Prot
Match: sp|Q9SZP1|MYB4_ARATH (Transcription repressor MYB4 OS=Arabidopsis thaliana OX=3702 GN=MYB4 PE=1 SV=1)

HSP 1 Score: 269.6 bits (688), Expect = 3.8e-71
Identity = 117/140 (83.57%), Postives = 130/140 (92.86%), Query Frame = 0


Query: 1   MGRSPCCEKAHTNKGAWTKDEDQRLIDYIRLHGEGCWRTLPKAAGLLRCGKSCRLRWINY 60
           MGRSPCCEKAHTNKGAWTK+ED+RL+ YI+ HGEGCWR+LPKAAGLLRCGKSCRLRWINY
Sbjct: 1   MGRSPCCEKAHTNKGAWTKEEDERLVAYIKAHGEGCWRSLPKAAGLLRCGKSCRLRWINY 60

Query: 61  LRPDLKRGNFTQDEDELIIKLHSLLGNKWSVIAGRLPGRTDNEIKNYWNTHIKRKLISRG 120
           LRPDLKRGNFT++EDELIIKLHSLLGNKWS+IAGRLPGRTDNEIKNYWNTHI+RKLI+RG
Sbjct: 61  LRPDLKRGNFTEEEDELIIKLHSLLGNKWSLIAGRLPGRTDNEIKNYWNTHIRRKLINRG 120

Query: 121 IDPQTHRPLNEPTAVSTRLP 141
           IDP +HRP+ E +A     P
Sbjct: 121 IDPTSHRPIQESSASQDSKP 140

[Close]

BLAST of Carg27175 vs. Swiss-Prot
Match: sp|Q9S9K9|MYB3_ARATH (Transcription factor MYB3 OS=Arabidopsis thaliana OX=3702 GN=MYB3 PE=1 SV=1)

HSP 1 Score: 263.1 bits (671), Expect = 3.6e-69
Identity = 114/131 (87.02%), Postives = 125/131 (95.42%), Query Frame = 0


Query: 1   MGRSPCCEKAHTNKGAWTKDEDQRLIDYIRLHGEGCWRTLPKAAGLLRCGKSCRLRWINY 60
           MGRSPCCEKAH NKGAWTK+EDQ L+DYIR HGEGCWR+LP+AAGL RCGKSCRLRW+NY
Sbjct: 1   MGRSPCCEKAHMNKGAWTKEEDQLLVDYIRKHGEGCWRSLPRAAGLQRCGKSCRLRWMNY 60

Query: 61  LRPDLKRGNFTQDEDELIIKLHSLLGNKWSVIAGRLPGRTDNEIKNYWNTHIKRKLISRG 120
           LRPDLKRGNFT++EDELIIKLHSLLGNKWS+IAGRLPGRTDNEIKNYWNTHIKRKL+SRG
Sbjct: 61  LRPDLKRGNFTEEEDELIIKLHSLLGNKWSLIAGRLPGRTDNEIKNYWNTHIKRKLLSRG 120

Query: 121 IDPQTHRPLNE 132
           IDP +HR +NE
Sbjct: 121 IDPNSHRLINE 131

[Close]

BLAST of Carg27175 vs. TrEMBL
Match: tr|A0A1S3CB73|A0A1S3CB73_CUCME (transcription repressor MYB6-like OS=Cucumis melo OX=3656 GN=LOC103498715 PE=4 SV=1)

HSP 1 Score: 336.7 bits (862), Expect = 5.2e-89
Identity = 188/298 (63.09%), Postives = 198/298 (66.44%), Query Frame = 0


Query: 1   MGRSPCCEKAHTNKGAWTKDEDQRLIDYIRLHGEGCWRTLPKAAGLLRCGKSCRLRWINY 60
           MGRSPCCEKAHTNKGAWTKDEDQRLIDYIRLHGEGCWRTLPKAAGLLRCGKSCRLRWINY
Sbjct: 1   MGRSPCCEKAHTNKGAWTKDEDQRLIDYIRLHGEGCWRTLPKAAGLLRCGKSCRLRWINY 60

Query: 61  LRPDLKRGNFTQDEDELIIKLHSLLGNKWSVIAGRLPGRTDNEIKNYWNTHIKRKLISRG 120
           LRPDLKRGNFT+DEDELII+LHSLLGNKWSVIAG+LPGRTDNEIKNYWNTHIKRKLI+RG
Sbjct: 61  LRPDLKRGNFTEDEDELIIRLHSLLGNKWSVIAGKLPGRTDNEIKNYWNTHIKRKLITRG 120

Query: 121 IDPQTHRPLNEP----TAVSTRLPYRN------------PXXXXXXXXXXXXXXXXXXXX 180
           IDPQTHRPLNEP    TA+S RLPY++             XXXXXXXXX           
Sbjct: 121 IDPQTHRPLNEPPTAGTALSPRLPYQSXXXXXXXXXXXXXXXXXXXXXXLPNIAELPIVK 180

Query: 181 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLQPFQAEATRGSP 240
                                                          LQPFQ E  RG  
Sbjct: 181 PANNVHSSDADEEGSGTTTEMDPPVAAAETMLGVHVKTEVNLELSIGLQPFQGEGVRGGS 240

Query: 241 --GSSAESRLRDRRSFGSVCLCWQLGSENSGGGGECCRNCESSYGWVFGIRASALGSS 281
             GSSAESRLR+ R    +CLCWQLG E    GGE CRNCE +YGW    R SALGSS
Sbjct: 241 VLGSSAESRLREERRALVMCLCWQLGWEK---GGESCRNCERTYGW---FRGSALGSS 292

[Close]

BLAST of Carg27175 vs. TrEMBL
Match: tr|A0A0A0KXZ4|A0A0A0KXZ4_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G651640 PE=4 SV=1)

HSP 1 Score: 291.6 bits (745), Expect = 1.9e-75
Identity = 130/132 (98.48%), Postives = 132/132 (100.00%), Query Frame = 0


Query: 1   MGRSPCCEKAHTNKGAWTKDEDQRLIDYIRLHGEGCWRTLPKAAGLLRCGKSCRLRWINY 60
           MGRSPCCEKAHTNKGAWTKDEDQRLIDYIRLHGEGCWRTLPKAAGLLRCGKSCRLRWINY
Sbjct: 1   MGRSPCCEKAHTNKGAWTKDEDQRLIDYIRLHGEGCWRTLPKAAGLLRCGKSCRLRWINY 60

Query: 61  LRPDLKRGNFTQDEDELIIKLHSLLGNKWSVIAGRLPGRTDNEIKNYWNTHIKRKLISRG 120
           LRPDLKRGNFT+DEDELIIKLHSLLGNKWSVIAGRLPGRTDNEIKNYWNTHIKRKLI+RG
Sbjct: 61  LRPDLKRGNFTEDEDELIIKLHSLLGNKWSVIAGRLPGRTDNEIKNYWNTHIKRKLITRG 120

Query: 121 IDPQTHRPLNEP 133
           IDPQTHRPLNEP
Sbjct: 121 IDPQTHRPLNEP 132

[Close]

BLAST of Carg27175 vs. TrEMBL
Match: tr|W9RZD0|W9RZD0_9ROSA (Transcription factor OS=Morus notabilis OX=981085 GN=L484_025446 PE=4 SV=1)

HSP 1 Score: 289.7 bits (740), Expect = 7.2e-75
Identity = 130/144 (90.28%), Postives = 139/144 (96.53%), Query Frame = 0


Query: 1   MGRSPCCEKAHTNKGAWTKDEDQRLIDYIRLHGEGCWRTLPKAAGLLRCGKSCRLRWINY 60
           MGRSPCCEKAHTNKGAWTK+EDQRLIDYIR+HGEGCWR+LPKAAGLLRCGKSCRLRWINY
Sbjct: 1   MGRSPCCEKAHTNKGAWTKEEDQRLIDYIRVHGEGCWRSLPKAAGLLRCGKSCRLRWINY 60

Query: 61  LRPDLKRGNFTQDEDELIIKLHSLLGNKWSVIAGRLPGRTDNEIKNYWNTHIKRKLISRG 120
           LRPDLKRGNFT++EDELIIKLH LLGNKWS+IAGRLPGRTDNEIKNYWNTHIKRKLISRG
Sbjct: 61  LRPDLKRGNFTEEEDELIIKLHGLLGNKWSLIAGRLPGRTDNEIKNYWNTHIKRKLISRG 120

Query: 121 IDPQTHRPLNE-PTAVSTRLPYRN 144
           +DPQTHRPLNE   AVS+RL +RN
Sbjct: 121 LDPQTHRPLNETAAAVSSRLDFRN 144

[Close]

BLAST of Carg27175 vs. TrEMBL
Match: tr|A0A2P6PEX5|A0A2P6PEX5_ROSCH (Putative transcription factor MYB-HB-like family OS=Rosa chinensis OX=74649 GN=RchiOBHm_Chr7g0228621 PE=4 SV=1)

HSP 1 Score: 288.1 bits (736), Expect = 2.1e-74
Identity = 198/301 (65.78%), Postives = 222/301 (73.75%), Query Frame = 0


Query: 1   MGRSPCCEKAHTNKGAWTKDEDQRLIDYIRLHGEGCWRTLPKAAGLLRCGKSCRLRWINY 60
           MGRSPCCEKAHTNKGAWTK+EDQRLIDYIR+HGEGCWR+LPK AGLLRCGKSCRLRWINY
Sbjct: 1   MGRSPCCEKAHTNKGAWTKEEDQRLIDYIRIHGEGCWRSLPKQAGLLRCGKSCRLRWINY 60

Query: 61  LRPDLKRGNFTQDEDELIIKLHSLLGNKWSVIAGRLPGRTDNEIKNYWNTHIKRKLISRG 120
           LRPDLKRGNFT++EDELIIKLHSLLGNKWS+IAGRLPGRTDNEIKNYWNTHIKRKL++RG
Sbjct: 61  LRPDLKRGNFTEEEDELIIKLHSLLGNKWSLIAGRLPGRTDNEIKNYWNTHIKRKLLTRG 120

Query: 121 IDPQTHRPLNEPTA-------VSTRLPYRN------------------PXXXXXXXXXXX 180
           +DPQTHRPLNE  A        ++RL +RN                      XXXXXXXX
Sbjct: 121 LDPQTHRPLNEAPATAXXXXXATSRLDFRNGSPPFLSVEKINSLMDQTNFKNXXXXXXXX 180

Query: 181 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLQPF 240
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX                   L+PF
Sbjct: 181 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQKPEIMYKCGDLNLDLSIGLEPF 240

Query: 241 QAEATRGSPGSSAESRLRDR--------RSFGSVCLCWQLGSENSGGGGECCRNCESSYG 269
           Q+E TR S G+SAES+L  R            +VCLC Q+G ++S    E CR+C+ + G
Sbjct: 241 QSEPTRASSGNSAESKLTQRTPNNHDMFAQAAAVCLCCQVGFQSS----EACRSCQCTNG 297

[Close]

BLAST of Carg27175 vs. TrEMBL
Match: tr|A0A2I4GB56|A0A2I4GB56_9ROSI (transcription repressor MYB6-like OS=Juglans regia OX=51240 GN=LOC109006329 PE=4 SV=1)

HSP 1 Score: 287.3 bits (734), Expect = 3.6e-74
Identity = 156/297 (52.53%), Postives = 176/297 (59.26%), Query Frame = 0


Query: 1   MGRSPCCEKAHTNKGAWTKDEDQRLIDYIRLHGEGCWRTLPKAAGLLRCGKSCRLRWINY 60
           MGRSPCCEKAHTNKGAWTK+EDQRLIDYIR+HGEGCWR+LPKAAGLLRCGKSCRLRWINY
Sbjct: 1   MGRSPCCEKAHTNKGAWTKEEDQRLIDYIRVHGEGCWRSLPKAAGLLRCGKSCRLRWINY 60

Query: 61  LRPDLKRGNFTQDEDELIIKLHSLLGNKWSVIAGRLPGRTDNEIKNYWNTHIKRKLISRG 120
           LRPDLKRGNFT++EDELIIKLHSLLGNKWS+IAGRLPGRTDNEIKNYWNTHIKRKLI RG
Sbjct: 61  LRPDLKRGNFTEEEDELIIKLHSLLGNKWSLIAGRLPGRTDNEIKNYWNTHIKRKLIGRG 120

Query: 121 IDPQTHRPLNE---PTAVSTRLPYR---------------NPXXXXXXXXXXXXXXXXXX 180
           IDPQTHRP+NE    T+ ++ L +R               N                   
Sbjct: 121 IDPQTHRPINEIAAATSTASHLDFRKSSPPSIPVAEISLINQRNNNYTCNDFSTATLNPK 180

Query: 181 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLQPFQAEATRG 240
                                                            L PFQAE+TR 
Sbjct: 181 TESVEDVNCTSSGTTTEEGSPRLQQRQKPIHEQQDQLFESELNLELSVGLGPFQAESTRV 240

Query: 241 SPGSSAESRLR--DRRSFG---------SVCLCWQLGSENSGGGGECCRNCESSYGW 269
           S  ++AES+L+      FG         +VCLC  LG E      E CRNC++S G+
Sbjct: 241 SSANTAESKLQKVPYELFGTVQSAMVAQAVCLCCHLGYERK----ELCRNCQNSNGF 293

The following BLAST results are available for this feature:

BLAST of Carg27175 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022925370.1	8.0e-118	99.64	transcription factor MYB8-like [Cucurbita moschata]	[more]
XP_023535357.1	6.8e-117	99.64	transcription factor MYB8-like [Cucurbita pepo subsp. pepo]	[more]
XP_022973987.1	2.0e-116	98.21	transcription factor MYB8-like [Cucurbita maxima]	[more]
XP_022948307.1	4.3e-95	71.23	transcription repressor MYB6-like [Cucurbita moschata]	[more]
XP_022998629.1	4.3e-95	69.50	transcription factor MYB8-like [Cucurbita maxima]	[more]

BLAST of Carg27175 vs. TAIR10


Match Name	E-value	Identity	Description
AT4G09460.1	2.3e-74	86.33	myb domain protein 6	[more]
AT4G38620.1	2.1e-72	83.57	myb domain protein 4	[more]
AT1G22640.1	2.0e-70	87.02	myb domain protein 3	[more]
AT2G16720.1	5.8e-70	86.26	myb domain protein 7	[more]
AT4G34990.1	3.2e-68	83.21	myb domain protein 32	[more]

BLAST of Carg27175 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|P81395\|MYB30_ANTMA	8.2e-74	86.01	Myb-related protein 330 OS=Antirrhinum majus OX=4151 GN=MYB330 PE=2 SV=1	[more]
sp\|Q38851\|MYB6_ARATH	4.1e-73	86.33	Transcription repressor MYB6 OS=Arabidopsis thaliana OX=3702 GN=MYB6 PE=1 SV=1	[more]
sp\|P81393\|MYB08_ANTMA	2.2e-71	88.06	Myb-related protein 308 OS=Antirrhinum majus OX=4151 GN=MYB308 PE=2 SV=1	[more]
sp\|Q9SZP1\|MYB4_ARATH	3.8e-71	83.57	Transcription repressor MYB4 OS=Arabidopsis thaliana OX=3702 GN=MYB4 PE=1 SV=1	[more]
sp\|Q9S9K9\|MYB3_ARATH	3.6e-69	87.02	Transcription factor MYB3 OS=Arabidopsis thaliana OX=3702 GN=MYB3 PE=1 SV=1	[more]

BLAST of Carg27175 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A1S3CB73\|A0A1S3CB73_CUCME	5.2e-89	63.09	transcription repressor MYB6-like OS=Cucumis melo OX=3656 GN=LOC103498715 PE=4 S...	[more]
tr\|A0A0A0KXZ4\|A0A0A0KXZ4_CUCSA	1.9e-75	98.48	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G651640 PE=4 SV=1	[more]
tr\|W9RZD0\|W9RZD0_9ROSA	7.2e-75	90.28	Transcription factor OS=Morus notabilis OX=981085 GN=L484_025446 PE=4 SV=1	[more]
tr\|A0A2P6PEX5\|A0A2P6PEX5_ROSCH	2.1e-74	65.78	Putative transcription factor MYB-HB-like family OS=Rosa chinensis OX=74649 GN=R...	[more]
tr\|A0A2I4GB56\|A0A2I4GB56_9ROSI	3.6e-74	52.53	transcription repressor MYB6-like OS=Juglans regia OX=51240 GN=LOC109006329 PE=4...	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Molecular Function**
Term	Definition
GO:0003677	DNA binding

Vocabulary: **INTERPRO**
Term	Definition
IPR009057	Homeobox-like_sf
IPR017930	Myb_dom
IPR001005	SANT/Myb

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003677	DNA binding

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg27175-RA	Carg27175-RA	mRNA

InterPro

Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001005	SANT/Myb domain	SMART	SM00717	sant	coord: 66..114 e-value: 5.2E-17 score: 72.5 coord: 13..63 e-value: 2.5E-13 score: 60.3
IPR001005	SANT/Myb domain	PFAM	PF00249	Myb_DNA-binding	coord: 14..61 e-value: 2.6E-15 score: 56.2 coord: 67..111 e-value: 4.6E-16 score: 58.6
IPR001005	SANT/Myb domain	CDD	cd00167	SANT	coord: 69..112 e-value: 3.59539E-12 score: 58.741
IPR001005	SANT/Myb domain	CDD	cd00167	SANT	coord: 16..61 e-value: 1.50019E-10 score: 54.5038
None	No IPR available	GENE3D	G3DSA:1.10.10.60		coord: 69..116 e-value: 1.2E-20 score: 75.2
None	No IPR available	GENE3D	G3DSA:1.10.10.60		coord: 12..67 e-value: 4.8E-17 score: 63.6
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 119..196
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 129..157
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 165..189
None	No IPR available	PANTHER	PTHR10641	MYB-LIKE DNA-BINDING PROTEIN MYB	coord: 1..219
None	No IPR available	PANTHER	PTHR10641:SF741	TRANSCRIPTION FACTOR MYB32-RELATED	coord: 1..219
IPR017930	Myb domain	PROSITE	PS51294	HTH_MYB	coord: 9..61 score: 16.791
IPR017930	Myb domain	PROSITE	PS51294	HTH_MYB	coord: 62..116 score: 27.658
IPR009057	Homeobox-like domain superfamily	SUPERFAMILY	SSF46689	Homeodomain-like	coord: 13..108

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Carg27175	Csa5G651640	Cucumber (Chinese Long) v2	carcuB0877
Carg27175	MELO3C022213	Melon (DHL92) v3.5.1	carmeB0850
Carg27175	ClCG08G000350	Watermelon (Charleston Gray)	carwcgB0834
Carg27175	CSPI05G31370	Wild cucumber (PI 183967)	carcpiB0897
Carg27175	Cucsa.061660	Cucumber (Gy14) v1	carcgyB0982
Carg27175	CmaCh09G012280	Cucurbita maxima (Rimu)	carcmaB1193
Carg27175	CmoCh09G013230	Cucurbita moschata (Rifu)	carcmoB1162
Carg27175	Lsi08G000280	Bottle gourd (USVL1VR-Ls)	carlsiB783
Carg27175	Cp4.1LG06g10160	Cucurbita pepo (Zucchini)	carcpeB1202
Carg27175	MELO3C022213.2	Melon (DHL92) v3.6.1	carmedB0861
Carg27175	CsaV3_5G040410	Cucumber (Chinese Long) v3	carcucB0901
Carg27175	Cla97C08G144790	Watermelon (97103) v2	carwmbB0898

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Carg27175	Cucumber (Gy14) v2	carcgybB0851