Carg27150 (gene) Silver-seed gourd | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Carg27150
Type	gene
Organism	Cucurbita argyrosperma (Silver-seed gourd)
Description	Mast/stem cell growth factor receptor Kit like
Location	Cucurbita_argyrosperma_scaffold_474 : 14129 .. 16526 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AGCTGTTCTAAGATAAAAAAGAGATCTTTTTCAATAAATTTGAGAAGAGGGGGTTAGATTTGGATACCCATTAAAAGTCTGATTCTTTTCTTTGTTTGTATTAAGAGATTCGTTCCAATCACCAGTTTATTTATTCCGCTATTCACTCTCAGTAAATCCTTTCCACTTTCTCCGATGGCAATTCAGGCGCGTTCTTGCGATCCCTCGCTCATCAAGCTTGGATTGGCTTTGATCGCCCTCTCTATTGCCGGCTACATTCTCGGCCCTCCTCTCTACTGGCATGTCAAGGAAGGTTTCGCCGTCGTTAGCCGCTCATCTTCTTCTTCCTCTTGCCCTCCTTGCTTCTGCGACTGCCCTTCTCAGCCCGTCATCTCAATTCCCGAAGGTAACTTCAAAATTTGTTCGTTCTAATTCTCAGATCCGATTAGATCTCATCTGGGTTTCATCTGATTTCGGCGGAGATTTGTTAGTTTTGTGATTCGCTTGCTTAGATCTCGTGTTTTGGGGGTTTTCTTGTGGTTCCCTGTTCTTTGATTCTGATTATAATGTCGGTTTTATGTGATTCTAGGGTTTATGAATTTTGAAATGGTTTCTGTTTATGGATTGTGGTCTAATTGTTTATCTGATTATGTTTATCTGCAGAATTGAGGAACTCTACGTTTGCAGGTTAGTTTTACTTTCTTTCTCAAGTGATTATAATGATTCTGCTTCCTCATGACTATTGAAACAATGTAAAAGATCTCAATATATGAACTCTTCTACTGATCATGAACTAGATTGCATTGTTCTAAGAGAGCCATTGGATGATGTTTCCTCCATTTATAGGTTCTTCAATATTTTCAGTAAAAATGCCTTTCGAGGTAGGCTCGCCTTGAGTTTTTCTTAGGCTGTAATTGTGATATCTCACGTCGGCTGGGTCCTGAAGAGAGTGGATTGTGAGAGCCCACATTGGTTGGAGAGGGAAACGAAACATTCTTTTTCAGGGTGTGAAAACCTCTCACTAGCATACGCGTTTTAAATGTTTGAGAGGAACCTCGGAAGGGAAAATCCAAAGAGGACAATATCTGCTAGCGGTGGGCTTGGGCCGTTAGGTAACTCTTGAGTTGAAGGGTGAGGCATGAAATGAAGTAGCAACATGAATGGATAAAGGAGCATGAATGATCTATCAATTGCTTTCTTAATACGTTTTAAAGTCGAGATTCATAAGTGCCTCTAGAAATAGTGTCCTATGGTAAATGTGAGGCCATAATCATGATGAACTTGAGTAGCTCGTAAGAAGCACGGACACTTTAGTTTGGTTAATAATCACGATGAACTTGAGTAGCTCGAAAGAAGCACGGACACTTACCATGATGAACTTGAGTAGCTTGTAAGAAGCACGGACACTTCAGTTTGGTCAATAATCATGATGAACACGAGTAACGATCCAATATTTAGGTGTGGTTTAGATTTTTCTTCTTTCGACTTCCATACTTCTTCCAACGAACTGTAAATACTCGGTACATTTTGTAGATTGTGTTAAGCATGATCCAGAAGTGAGTCAAGACACAGAGAAGAACTTCGCAGACCTATTGTTAGAGGAGCTGAAGTTAAAGGAAGCCGAAGCCTCGGAAAGTCATCGCCGTGCTGATATGGCTCTGCTCGAGGCGAAGAAGATGACATCTCAGTATCAAAAAGAAGCAGACAAGTGCAATTCTGGGATGGAAACATGTGAAGAAGCAAGAGAGAAAGCTGAAGCAGTATTAGCTGCTCAGAAGAGACTAACAGCAACATGGGAGCAAAGGGCTCGCCAAAGGGGCTGGAAAGAGGGGGCTGCTAAGTCTCGTATTCAAAAACAAGGAAATATTCAAACTGCATAAAACAGCATCCAAGCAGAGTAACACCTCCTCCCGTCCTCGCCTTTTGTTTTCGTTTCATATATATATATAATTTTTTGGTAGTAACTTAAATTTCACTCGACATCCTCGAATAGATCGGAATGAACTATTTCAGGTATCTTTAGAGAATCGAAATGTCAATTACCGTTTAGTTAAGCCTATGAAAACGTTCATTAGTTGAAAGCAACTAATGTATTGATGAAGTTATGTTACTCTCATTTGTTATCTTCTTTGTGGCCTAATGGCCTCGTTCGAAACAAAATCGAAAGTTCAAGAACATATGACACGATGAACCTTTTCATAGGCAATCCATAATTCTCAACTACATGAATTTACATATATGTTTGTCCAGAAAGAGATCAAATAAGAAAGTTATAAGGTTACACAGGCTTCCATGTGACGTGGGAATCGAGCGATGATTATGGTGCTCGAGTCTACCTTCCCGACATTAAGTTGACGAGGGCTTGGTTTTCGTAGAACGAGCCAACATCCCAATCTTCTGTTGCAGAAGAAAGTGTCAT

mRNA sequence

AGCTGTTCTAAGATAAAAAAGAGATCTTTTTCAATAAATTTGAGAAGAGGGGGTTAGATTTGGATACCCATTAAAAGTCTGATTCTTTTCTTTGTTTGTATTAAGAGATTCGTTCCAATCACCAGTTTATTTATTCCGCTATTCACTCTCAGTAAATCCTTTCCACTTTCTCCGATGGCAATTCAGGCGCGTTCTTGCGATCCCTCGCTCATCAAGCTTGGATTGGCTTTGATCGCCCTCTCTATTGCCGGCTACATTCTCGGCCCTCCTCTCTACTGGCATGTCAAGGAAGGTTTCGCCGTCGTTAGCCGCTCATCTTCTTCTTCCTCTTGCCCTCCTTGCTTCTGCGACTGCCCTTCTCAGCCCGTCATCTCAATTCCCGAAGAATTGAGGAACTCTACGTTTGCAGATTGTGTTAAGCATGATCCAGAAGTGAGTCAAGACACAGAGAAGAACTTCGCAGACCTATTGTTAGAGGAGCTGAAGTTAAAGGAAGCCGAAGCCTCGGAAAGTCATCGCCGTGCTGATATGGCTCTGCTCGAGGCGAAGAAGATGACATCTCAGTATCAAAAAGAAGCAGACAAGTGCAATTCTGGGATGGAAACATGTGAAGAAGCAAGAGAGAAAGCTGAAGCAGTATTAGCTGCTCAGAAGAGACTAACAGCAACATGGGAGCAAAGGGCTCGCCAAAGGGGCTGGAAAGAGGGGGCTGCTAAGTCTCGTATTCAAAAACAAGGAAATATTCAAACTGCATAAAACAGCATCCAAGCAGAGTAACACCTCCTCCCGTCCTCGCCTTTTGTTTTCGTTTCATATATATATATAATTTTTTGGTAGTAACTTAAATTTCACTCGACATCCTCGAATAGATCGGAATGAACTATTTCAGGTATCTTTAGAGAATCGAAATGTCAATTACCGTTTAGTTAAGCCTATGAAAACGTTCATTAGTTGAAAGCAACTAATGTATTGATGAAGTTATGTTACTCTCATTTGTTATCTTCTTTGTGGCCTAATGGCCTCGTTCGAAACAAAATCGAAAGTTCAAGAACATATGACACGATGAACCTTTTCATAGGCAATCCATAATTCTCAACTACATGAATTTACATATATGTTTGTCCAGAAAGAGATCAAATAAGAAAGTTATAAGGTTACACAGGCTTCCATGTGACGTGGGAATCGAGCGATGATTATGGTGCTCGAGTCTACCTTCCCGACATTAAGTTGACGAGGGCTTGGTTTTCGTAGAACGAGCCAACATCCCAATCTTCTGTTGCAGAAGAAAGTGTCAT

Coding sequence (CDS)

ATGGCAATTCAGGCGCGTTCTTGCGATCCCTCGCTCATCAAGCTTGGATTGGCTTTGATCGCCCTCTCTATTGCCGGCTACATTCTCGGCCCTCCTCTCTACTGGCATGTCAAGGAAGGTTTCGCCGTCGTTAGCCGCTCATCTTCTTCTTCCTCTTGCCCTCCTTGCTTCTGCGACTGCCCTTCTCAGCCCGTCATCTCAATTCCCGAAGAATTGAGGAACTCTACGTTTGCAGATTGTGTTAAGCATGATCCAGAAGTGAGTCAAGACACAGAGAAGAACTTCGCAGACCTATTGTTAGAGGAGCTGAAGTTAAAGGAAGCCGAAGCCTCGGAAAGTCATCGCCGTGCTGATATGGCTCTGCTCGAGGCGAAGAAGATGACATCTCAGTATCAAAAAGAAGCAGACAAGTGCAATTCTGGGATGGAAACATGTGAAGAAGCAAGAGAGAAAGCTGAAGCAGTATTAGCTGCTCAGAAGAGACTAACAGCAACATGGGAGCAAAGGGCTCGCCAAAGGGGCTGGAAAGAGGGGGCTGCTAAGTCTCGTATTCAAAAACAAGGAAATATTCAAACTGCATAA

Protein sequence

MAIQARSCDPSLIKLGLALIALSIAGYILGPPLYWHVKEGFAVVSRSSSSSSCPPCFCDCPSQPVISIPEELRNSTFADCVKHDPEVSQDTEKNFADLLLEELKLKEAEASESHRRADMALLEAKKMTSQYQKEADKCNSGMETCEEAREKAEAVLAAQKRLTATWEQRARQRGWKEGAAKSRIQKQGNIQTA

Homology

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BLAST of Carg27150 vs. NCBI nr
Match: XP_022930736.1 (uncharacterized protein LOC111437126 isoform X1 [Cucurbita moschata] >XP_022930737.1 uncharacterized protein LOC111437126 isoform X1 [Cucurbita moschata])

HSP 1 Score: 374.8 bits (961), Expect = 1.8e-100
Identity = 193/193 (100.00%), Postives = 193/193 (100.00%), Query Frame = 0


Query: 1   MAIQARSCDPSLIKLGLALIALSIAGYILGPPLYWHVKEGFAVVSRSSSSSSCPPCFCDC 60
           MAIQARSCDPSLIKLGLALIALSIAGYILGPPLYWHVKEGFAVVSRSSSSSSCPPCFCDC
Sbjct: 1   MAIQARSCDPSLIKLGLALIALSIAGYILGPPLYWHVKEGFAVVSRSSSSSSCPPCFCDC 60

Query: 61  PSQPVISIPEELRNSTFADCVKHDPEVSQDTEKNFADLLLEELKLKEAEASESHRRADMA 120
           PSQPVISIPEELRNSTFADCVKHDPEVSQDTEKNFADLLLEELKLKEAEASESHRRADMA
Sbjct: 61  PSQPVISIPEELRNSTFADCVKHDPEVSQDTEKNFADLLLEELKLKEAEASESHRRADMA 120

Query: 121 LLEAKKMTSQYQKEADKCNSGMETCEEAREKAEAVLAAQKRLTATWEQRARQRGWKEGAA 180
           LLEAKKMTSQYQKEADKCNSGMETCEEAREKAEAVLAAQKRLTATWEQRARQRGWKEGAA
Sbjct: 121 LLEAKKMTSQYQKEADKCNSGMETCEEAREKAEAVLAAQKRLTATWEQRARQRGWKEGAA 180

Query: 181 KSRIQKQGNIQTA 194
           KSRIQKQGNIQTA
Sbjct: 181 KSRIQKQGNIQTA 193

[Close]

BLAST of Carg27150 vs. NCBI nr
Match: XP_023529511.1 (uncharacterized protein LOC111792346 isoform X1 [Cucurbita pepo subsp. pepo] >XP_023529512.1 uncharacterized protein LOC111792346 isoform X1 [Cucurbita pepo subsp. pepo] >XP_023529513.1 uncharacterized protein LOC111792346 isoform X2 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 371.7 bits (953), Expect = 1.5e-99
Identity = 192/193 (99.48%), Postives = 192/193 (99.48%), Query Frame = 0


Query: 1   MAIQARSCDPSLIKLGLALIALSIAGYILGPPLYWHVKEGFAVVSRSSSSSSCPPCFCDC 60
           MAIQARSCDPSLIKLGLALIALSIAGYILGPPLYWHVKEGFAVVSRSSSSSSCPPCFCDC
Sbjct: 1   MAIQARSCDPSLIKLGLALIALSIAGYILGPPLYWHVKEGFAVVSRSSSSSSCPPCFCDC 60

Query: 61  PSQPVISIPEELRNSTFADCVKHDPEVSQDTEKNFADLLLEELKLKEAEASESHRRADMA 120
            SQPVISIPEELRNSTFADCVKHDPEVSQDTEKNFADLLLEELKLKEAEASESHRRADMA
Sbjct: 61  SSQPVISIPEELRNSTFADCVKHDPEVSQDTEKNFADLLLEELKLKEAEASESHRRADMA 120

Query: 121 LLEAKKMTSQYQKEADKCNSGMETCEEAREKAEAVLAAQKRLTATWEQRARQRGWKEGAA 180
           LLEAKKMTSQYQKEADKCNSGMETCEEAREKAEAVLAAQKRLTATWEQRARQRGWKEGAA
Sbjct: 121 LLEAKKMTSQYQKEADKCNSGMETCEEAREKAEAVLAAQKRLTATWEQRARQRGWKEGAA 180

Query: 181 KSRIQKQGNIQTA 194
           KSRIQKQGNIQTA
Sbjct: 181 KSRIQKQGNIQTA 193

[Close]

BLAST of Carg27150 vs. NCBI nr
Match: XP_022988959.1 (uncharacterized protein LOC111486163 isoform X1 [Cucurbita maxima] >XP_022988960.1 uncharacterized protein LOC111486163 isoform X1 [Cucurbita maxima])

HSP 1 Score: 367.1 bits (941), Expect = 3.7e-98
Identity = 190/193 (98.45%), Postives = 190/193 (98.45%), Query Frame = 0


Query: 1   MAIQARSCDPSLIKLGLALIALSIAGYILGPPLYWHVKEGFAVVSRSSSSSSCPPCFCDC 60
           MAIQARSCDPSLIKLGLALIALSIAGYILGPPLYWHVKEGFAVVSRSSSSSSCPPCFCDC
Sbjct: 1   MAIQARSCDPSLIKLGLALIALSIAGYILGPPLYWHVKEGFAVVSRSSSSSSCPPCFCDC 60

Query: 61  PSQPVISIPEELRNSTFADCVKHDPEVSQDTEKNFADLLLEELKLKEAEASESHRRADMA 120
           PSQPVISIPEELRNSTFA CVKHDPEVSQDTEKNFADLLLEELKLKEAEASESHRRADMA
Sbjct: 61  PSQPVISIPEELRNSTFAGCVKHDPEVSQDTEKNFADLLLEELKLKEAEASESHRRADMA 120

Query: 121 LLEAKKMTSQYQKEADKCNSGMETCEEAREKAEAVLAAQKRLTATWEQRARQRGWKEGAA 180
           LLEAKKMTSQYQKEADKCNSGMETCEEAREKAEAVLAAQKRLTATWEQRARQ GWKEGAA
Sbjct: 121 LLEAKKMTSQYQKEADKCNSGMETCEEAREKAEAVLAAQKRLTATWEQRARQWGWKEGAA 180

Query: 181 KSRIQKQGNIQTA 194
           KSR QKQGNIQTA
Sbjct: 181 KSRTQKQGNIQTA 193

[Close]

BLAST of Carg27150 vs. NCBI nr
Match: XP_022930738.1 (uncharacterized protein LOC111437126 isoform X2 [Cucurbita moschata] >XP_022930739.1 uncharacterized protein LOC111437126 isoform X2 [Cucurbita moschata])

HSP 1 Score: 351.7 bits (901), Expect = 1.6e-93
Identity = 185/193 (95.85%), Postives = 185/193 (95.85%), Query Frame = 0


Query: 1   MAIQARSCDPSLIKLGLALIALSIAGYILGPPLYWHVKEGFAVVSRSSSSSSCPPCFCDC 60
           MAIQARSCDPSLIKLGLALIALSIAGYILGPPLYWHVKEGFAVVSRSSSSSSCPPCFCDC
Sbjct: 1   MAIQARSCDPSLIKLGLALIALSIAGYILGPPLYWHVKEGFAVVSRSSSSSSCPPCFCDC 60

Query: 61  PSQPVISIPEELRNSTFADCVKHDPEVSQDTEKNFADLLLEELKLKEAEASESHRRADMA 120
           PSQPVISIPE        DCVKHDPEVSQDTEKNFADLLLEELKLKEAEASESHRRADMA
Sbjct: 61  PSQPVISIPE--------DCVKHDPEVSQDTEKNFADLLLEELKLKEAEASESHRRADMA 120

Query: 121 LLEAKKMTSQYQKEADKCNSGMETCEEAREKAEAVLAAQKRLTATWEQRARQRGWKEGAA 180
           LLEAKKMTSQYQKEADKCNSGMETCEEAREKAEAVLAAQKRLTATWEQRARQRGWKEGAA
Sbjct: 121 LLEAKKMTSQYQKEADKCNSGMETCEEAREKAEAVLAAQKRLTATWEQRARQRGWKEGAA 180

Query: 181 KSRIQKQGNIQTA 194
           KSRIQKQGNIQTA
Sbjct: 181 KSRIQKQGNIQTA 185

[Close]

BLAST of Carg27150 vs. NCBI nr
Match: XP_023529514.1 (uncharacterized protein LOC111792346 isoform X3 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 348.6 bits (893), Expect = 1.4e-92
Identity = 184/193 (95.34%), Postives = 184/193 (95.34%), Query Frame = 0


Query: 1   MAIQARSCDPSLIKLGLALIALSIAGYILGPPLYWHVKEGFAVVSRSSSSSSCPPCFCDC 60
           MAIQARSCDPSLIKLGLALIALSIAGYILGPPLYWHVKEGFAVVSRSSSSSSCPPCFCDC
Sbjct: 1   MAIQARSCDPSLIKLGLALIALSIAGYILGPPLYWHVKEGFAVVSRSSSSSSCPPCFCDC 60

Query: 61  PSQPVISIPEELRNSTFADCVKHDPEVSQDTEKNFADLLLEELKLKEAEASESHRRADMA 120
            SQPVISIPE        DCVKHDPEVSQDTEKNFADLLLEELKLKEAEASESHRRADMA
Sbjct: 61  SSQPVISIPE--------DCVKHDPEVSQDTEKNFADLLLEELKLKEAEASESHRRADMA 120

Query: 121 LLEAKKMTSQYQKEADKCNSGMETCEEAREKAEAVLAAQKRLTATWEQRARQRGWKEGAA 180
           LLEAKKMTSQYQKEADKCNSGMETCEEAREKAEAVLAAQKRLTATWEQRARQRGWKEGAA
Sbjct: 121 LLEAKKMTSQYQKEADKCNSGMETCEEAREKAEAVLAAQKRLTATWEQRARQRGWKEGAA 180

Query: 181 KSRIQKQGNIQTA 194
           KSRIQKQGNIQTA
Sbjct: 181 KSRIQKQGNIQTA 185

[Close]

BLAST of Carg27150 vs. TAIR10
Match: AT1G05070.1 (Protein of unknown function (DUF1068))

HSP 1 Score: 205.7 bits (522), Expect = 2.6e-53
Identity = 103/181 (56.91%), Postives = 131/181 (72.38%), Query Frame = 0


Query: 13  IKLGLALIALSIAGYILGPPLYWHVKEGFAVVSRSSSSSSCPPCFCDCPSQPVISIPEEL 72
           +K+GLAL+ LS+AGYILGPPLYWH+ E  A V    S+SSCP C C+C +   ++IP+EL
Sbjct: 8   LKIGLALLGLSMAGYILGPPLYWHLTEALAAV----SASSCPSCPCECSTYSAVTIPKEL 67

Query: 73  RNSTFADCVKHDPEVSQDTEKNFADLLLEELKLKEAEASESHRRADMALLEAKKMTSQYQ 132
            N++FADC KHDPEV++DTEKN+A+LL EELKL+EAE+ E H+RADM LLEAKK+TS YQ
Sbjct: 68  SNASFADCAKHDPEVNEDTEKNYAELLTEELKLREAESLEKHKRADMGLLEAKKVTSSYQ 127

Query: 133 KEADKCNSGMETCEEAREKAEAVLAAQKRLTATWEQRARQRGWKEGAAKSRIQKQGNIQT 192
           KEADKCNSGMETCEEA                      RQ+GW+EG+ K  ++ + N+Q 
Sbjct: 128 KEADKCNSGMETCEEAXXXXXXXXXXXXXXXXXXXXXXRQKGWREGSTKPNVKSKSNVQV 184

Query: 193 A 194
           A
Sbjct: 188 A 184

[Close]

BLAST of Carg27150 vs. TAIR10
Match: AT2G32580.1 (Protein of unknown function (DUF1068))

HSP 1 Score: 195.7 bits (496), Expect = 2.7e-50
Identity = 101/181 (55.80%), Postives = 127/181 (70.17%), Query Frame = 0


Query: 13  IKLGLALIALSIAGYILGPPLYWHVKEGFAVVSRSSSSSSCPPCFCDCPSQPVISIPEEL 72
           +K+GLAL+ALS+ GYILGPPLYWH+ E  AV     S++SC  C CDC S P+++IP  L
Sbjct: 8   LKVGLALLALSMIGYILGPPLYWHLTEALAV-----SATSCSACVCDCSSLPLLTIPTGL 67

Query: 73  RNSTFADCVKHDPEVSQDTEKNFADLLLEELKLKEAEASESHRRADMALLEAKKMTSQYQ 132
            N +F DC K DPEV++DTEKN+A+LL EELK +EA + E H+R D  LLEAKK+TS YQ
Sbjct: 68  SNGSFTDCAKRDPEVNEDTEKNYAELLTEELKQREAASMEKHKRVDTGLLEAKKITSSYQ 127

Query: 133 KEADKCNSGMETCEEAREKAEAVLAAQKRLTATWEQRARQRGWKEGAAKSRIQKQGNIQT 192
           KEADKCNSGMETCEEAR                 EQRARQ+G+K+GA KS ++ +   + 
Sbjct: 128 KEADKCNSGMETCEEARXXXXXXXXXXXXXXXXXEQRARQKGYKDGATKSTVKSKSGTEV 183

Query: 193 A 194
           A
Sbjct: 188 A 183

[Close]

BLAST of Carg27150 vs. TAIR10
Match: AT4G04360.1 (Protein of unknown function (DUF1068))

HSP 1 Score: 180.3 bits (456), Expect = 1.2e-45
Identity = 95/171 (55.56%), Postives = 120/171 (70.18%), Query Frame = 0


Query: 14  KLGLALIALSIAGYILGPPLYWHVKEGFAVVSRSSSSSSCPPCFCDCPSQPVISIPEELR 73
           K+   ++ L I  YI GP LYWH+ E  A     S  SSCPPC CDC SQP++SIP+ L 
Sbjct: 10  KVVTVVMGLCIVAYIAGPSLYWHLNETIA----DSLHSSCPPCVCDCSSQPLLSIPDGLS 69

Query: 74  NSTFADCVKHDPEVSQDTEKNFADLLLEELKLKEAEASESHRRADMALLEAKKMTSQYQK 133
           N +F DC++H+ E S+++E +F +++ EELKL+EA+A E   RAD  LL+AKK  SQYQK
Sbjct: 70  NHSFLDCMRHE-EGSEESESSFTEMVAEELKLREAQAQEDEWRADRLLLDAKKAASQYQK 129

Query: 134 EADKCNSGMETCEEAREKAEAVLAAQKRLTATWEQRARQRGWKEGAAKSRI 185
           EADKC+ GMETCE AREKAEA L  Q+RL+  WE RARQ GWKEG   S +
Sbjct: 130 EADKCSMGMETCELAREKAEAALDEQRRLSYMWELRARQGGWKEGTVASDV 175

[Close]

BLAST of Carg27150 vs. TAIR10
Match: AT4G30996.1 (Protein of unknown function (DUF1068))

HSP 1 Score: 149.1 bits (375), Expect = 2.9e-36
Identity = 78/161 (48.45%), Postives = 106/161 (65.84%), Query Frame = 0


Query: 17  LALIALSIAGYILGPPLYWHVKEGFAVVSRSSSSSSCPPCFCDCPSQ-PVISIPEELRNS 76
           L + A+  A  + GP LYW   +GF  V  + ++S CPPC CDCP    ++ I   L N 
Sbjct: 12  LVIFAVVSALVVCGPALYWKFNKGF--VGSTRANSLCPPCVCDCPPPLSLLQIAPGLANL 71

Query: 77  TFADCVKHDPEVSQDTEKNFADLLLEELKLKEAEASESHRRADMALLEAKKMTSQYQKEA 136
           +  DC   DPE+ Q+ EK F DLL EELKL+EA A E  R  ++ L EAK++ SQYQKEA
Sbjct: 72  SITDCGSDDPELKQEMEKQFVDLLTEELKLQEAVADEHSRHMNVTLAEAKRVASQYQKEA 131

Query: 137 DKCNSGMETCEEAREKAEAVLAAQKRLTATWEQRARQRGWK 177
           +KCN+  E CE ARE+AEA+L  ++++T+ WE+RARQ GW+
Sbjct: 132 EKCNAATEICESARERAEALLIKERKITSLWEKRARQSGWE 170

[Close]

BLAST of Carg27150 vs. TAIR10
Match: AT2G24290.1 (Protein of unknown function (DUF1068))

HSP 1 Score: 139.4 bits (350), Expect = 2.3e-33
Identity = 75/161 (46.58%), Postives = 105/161 (65.22%), Query Frame = 0


Query: 17  LALIALSIAGYILGPPLYWHVKEGFAVVSRSSSSSSCPPCFCDCPSQ-PVISIPEELRNS 76
           L + ++  A  + GP LYW + +GF V S  S++S CPPC CD P    ++ I   L N 
Sbjct: 12  LVIFSVVSALLVCGPALYWKLNKGF-VGSARSTNSICPPCVCDFPPPLSLLQIAPGLANL 71

Query: 77  TFADCVKHDPEVSQDTEKNFADLLLEELKLKEAEASESHRRADMALLEAKKMTSQYQKEA 136
           +   C   DPE+ ++ EK F DLL EELKL+EA A E  R  ++ L EAK++ SQYQKEA
Sbjct: 72  SITGCGSDDPELKEEMEKPFVDLLTEELKLQEAVADEHSRHMNVTLAEAKRVASQYQKEA 131

Query: 137 DKCNSGMETCEEAREKAEAVLAAQKRLTATWEQRARQRGWK 177
           +KCN+  E CE ARE+A+A+L  ++++T  WE+RARQ GW+
Sbjct: 132 EKCNAATEICESARERAQALLLKERKITFLWERRARQLGWE 171

[Close]

BLAST of Carg27150 vs. TrEMBL
Match: tr|A0A1S3C135|A0A1S3C135_CUCME (uncharacterized protein LOC103495614 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103495614 PE=4 SV=1)

HSP 1 Score: 343.2 bits (879), Expect = 3.8e-91
Identity = 175/193 (90.67%), Postives = 182/193 (94.30%), Query Frame = 0


Query: 1   MAIQARSCDPSLIKLGLALIALSIAGYILGPPLYWHVKEGFAVVSRSSSSSSCPPCFCDC 60
           MAIQ  SC+PSLIKLGLALIA++I GYILGPPLYWH KEG AVVS SS+SSSCPPCFCDC
Sbjct: 1   MAIQPTSCNPSLIKLGLALIAITIVGYILGPPLYWHFKEGLAVVSHSSASSSCPPCFCDC 60

Query: 61  PSQPVISIPEELRNSTFADCVKHDPEVSQDTEKNFADLLLEELKLKEAEASESHRRADMA 120
           PSQPVISIPEELRNSTFADCVKHDPEVS+DTEKNFADLLLEELKLKEAEA E+ RRAD+A
Sbjct: 61  PSQPVISIPEELRNSTFADCVKHDPEVSRDTEKNFADLLLEELKLKEAEALENQRRADVA 120

Query: 121 LLEAKKMTSQYQKEADKCNSGMETCEEAREKAEAVLAAQKRLTATWEQRARQRGWKEGAA 180
           LLEAKKMTSQYQKEADKCNSGMETCEEAREKAEAVL AQKRLTATWEQRARQRGWKEG A
Sbjct: 121 LLEAKKMTSQYQKEADKCNSGMETCEEAREKAEAVLTAQKRLTATWEQRARQRGWKEGTA 180

Query: 181 KSRIQKQGNIQTA 194
           KSR QKQGNIQTA
Sbjct: 181 KSRTQKQGNIQTA 193

[Close]

BLAST of Carg27150 vs. TrEMBL
Match: tr|A0A0A0K245|A0A0A0K245_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G041970 PE=4 SV=1)

HSP 1 Score: 339.0 bits (868), Expect = 7.2e-90
Identity = 173/193 (89.64%), Postives = 180/193 (93.26%), Query Frame = 0


Query: 1   MAIQARSCDPSLIKLGLALIALSIAGYILGPPLYWHVKEGFAVVSRSSSSSSCPPCFCDC 60
           MAIQ  SC+PSLIKLGLALIA++I GYILGPPLYWH KEG AVV+ SSSSSSCPPCFCDC
Sbjct: 1   MAIQPSSCNPSLIKLGLALIAITIVGYILGPPLYWHFKEGLAVVTHSSSSSSCPPCFCDC 60

Query: 61  PSQPVISIPEELRNSTFADCVKHDPEVSQDTEKNFADLLLEELKLKEAEASESHRRADMA 120
           PS PVISIPEELRNSTFADCVKHDPEVS+DTEKNFADLLLEELKLKEAEA E+ RRAD+A
Sbjct: 61  PSHPVISIPEELRNSTFADCVKHDPEVSRDTEKNFADLLLEELKLKEAEALENQRRADVA 120

Query: 121 LLEAKKMTSQYQKEADKCNSGMETCEEAREKAEAVLAAQKRLTATWEQRARQRGWKEGAA 180
           LLEAKKMTSQYQKEADKCNSGMETCEEAREKAEAVL AQKRLTA WEQRARQRGWKEG A
Sbjct: 121 LLEAKKMTSQYQKEADKCNSGMETCEEAREKAEAVLTAQKRLTAMWEQRARQRGWKEGTA 180

Query: 181 KSRIQKQGNIQTA 194
           KSR QKQGNIQTA
Sbjct: 181 KSRTQKQGNIQTA 193

[Close]

BLAST of Carg27150 vs. TrEMBL
Match: tr|A0A2R6QWK5|A0A2R6QWK5_ACTCH (Mast/stem cell growth factor receptor Kit like OS=Actinidia chinensis var. chinensis OX=1590841 GN=CEY00_Acc13629 PE=4 SV=1)

HSP 1 Score: 285.4 bits (729), Expect = 9.4e-74
Identity = 142/190 (74.74%), Postives = 160/190 (84.21%), Query Frame = 0


Query: 4   QARSCDPSLIKLGLALIALSIAGYILGPPLYWHVKEGFAVVSRSSSSSSCPPCFCDCPSQ 63
           Q  SC P ++K  L L+ L +AGYILGPPLYWH  EG A VSRSSSS+SCPPC CDC SQ
Sbjct: 5   QPGSCSPGVLKAALVLLGLCLAGYILGPPLYWHFMEGVAAVSRSSSSASCPPCVCDCSSQ 64

Query: 64  PVISIPEELRNSTFADCVKHDPEVSQDTEKNFADLLLEELKLKEAEASESHRRADMALLE 123
           P+++IP+ L N++FADC KHDPEVS+DTEKNFA+LL EELKL+EAEA ESH+RADMALLE
Sbjct: 65  PLLNIPQGLTNASFADCAKHDPEVSEDTEKNFAELLSEELKLREAEALESHQRADMALLE 124

Query: 124 AKKMTSQYQKEADKCNSGMETCEEAREKAEAVLAAQKRLTATWEQRARQRGWKEGAAKSR 183
           AKK+TSQYQKEADKCNSGMETCEEAREKAEA L AQKR TATWE RARQRGWKE  AK R
Sbjct: 125 AKKITSQYQKEADKCNSGMETCEEAREKAEAALLAQKRQTATWELRARQRGWKEVIAKPR 184

Query: 184 IQKQGNIQTA 194
            Q QGN+Q +
Sbjct: 185 TQSQGNVQAS 194

[Close]

BLAST of Carg27150 vs. TrEMBL
Match: tr|A0A2P5B190|A0A2P5B190_PARAD (Uncharacterized protein OS=Parasponia andersonii OX=3476 GN=PanWU01x14_280910 PE=4 SV=1)

HSP 1 Score: 277.7 bits (709), Expect = 2.0e-71
Identity = 143/187 (76.47%), Postives = 156/187 (83.42%), Query Frame = 0


Query: 5   ARSCDPSLIKLGLALIALSIAGYILGPPLYWHVKEGFAVVSRSSSSSSCPPCFCDCPSQP 64
           A +C P ++K GL +IAL IAGYILGPPLYWH  EG A VS   SSSSCPPC CDC SQP
Sbjct: 8   AGACSPVVLKTGLTVIALCIAGYILGPPLYWHFMEGLAAVSH--SSSSCPPCVCDCSSQP 67

Query: 65  VISIPEELRNSTFADCVKHDPEVSQDTEKNFADLLLEELKLKEAEASESHRRADMALLEA 124
           ++SIP  L N++F DC K DPEVS+DTEKNFADLL EELKL+EAEA E  RRADMALLEA
Sbjct: 68  LLSIPIGLSNTSFTDCAKRDPEVSEDTEKNFADLLAEELKLREAEALEHQRRADMALLEA 127

Query: 125 KKMTSQYQKEADKCNSGMETCEEAREKAEAVLAAQKRLTATWEQRARQRGWKEGAAKSRI 184
           KK+TSQYQKEADKC SGMETCEEAREKAEA LAAQK+LTA WEQRARQRGWKEG AKSR 
Sbjct: 128 KKVTSQYQKEADKCTSGMETCEEAREKAEAALAAQKKLTAMWEQRARQRGWKEGMAKSRA 187

Query: 185 QKQGNIQ 192
           Q QGN+Q
Sbjct: 188 QTQGNVQ 192

[Close]

BLAST of Carg27150 vs. TrEMBL
Match: tr|A0A2P5EG56|A0A2P5EG56_9ROSA (Uncharacterized protein OS=Trema orientalis OX=63057 GN=TorRG33x02_197300 PE=4 SV=1)

HSP 1 Score: 276.9 bits (707), Expect = 3.3e-71
Identity = 143/188 (76.06%), Postives = 156/188 (82.98%), Query Frame = 0


Query: 5   ARSCDPSLIKLGLALIALSIAGYILGPPLYWHVKEGFAVVSRSSSSSSCPPCFCDCPSQP 64
           A +C P ++K GL +IAL IAGYILGPPLYWH  EG A VS   SSSSCP C CDC SQP
Sbjct: 8   AGACSPVVLKTGLTVIALCIAGYILGPPLYWHFMEGLAAVSH--SSSSCPTCVCDCSSQP 67

Query: 65  VISIPEELRNSTFADCVKHDPEVSQDTEKNFADLLLEELKLKEAEASESHRRADMALLEA 124
           ++SIP  L N++  DC K DPEVS+DTEKNFADLL EELKL+EAEA E  RRADMALLEA
Sbjct: 68  LLSIPIGLSNTSLTDCAKRDPEVSEDTEKNFADLLAEELKLREAEALEHQRRADMALLEA 127

Query: 125 KKMTSQYQKEADKCNSGMETCEEAREKAEAVLAAQKRLTATWEQRARQRGWKEGAAKSRI 184
           KK+TSQYQKEADKC SGMETCEEAREKAEA LAAQK+LTATWEQRARQRGWKEG AKSR 
Sbjct: 128 KKVTSQYQKEADKCTSGMETCEEAREKAEAALAAQKKLTATWEQRARQRGWKEGMAKSRA 187

Query: 185 QKQGNIQT 193
           Q QGN+QT
Sbjct: 188 QTQGNVQT 193

The following BLAST results are available for this feature:

BLAST of Carg27150 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022930736.1	1.8e-100	100.00	uncharacterized protein LOC111437126 isoform X1 [Cucurbita moschata] >XP_0229307...	[more]
XP_023529511.1	1.5e-99	99.48	uncharacterized protein LOC111792346 isoform X1 [Cucurbita pepo subsp. pepo] >XP...	[more]
XP_022988959.1	3.7e-98	98.45	uncharacterized protein LOC111486163 isoform X1 [Cucurbita maxima] >XP_022988960...	[more]
XP_022930738.1	1.6e-93	95.85	uncharacterized protein LOC111437126 isoform X2 [Cucurbita moschata] >XP_0229307...	[more]
XP_023529514.1	1.4e-92	95.34	uncharacterized protein LOC111792346 isoform X3 [Cucurbita pepo subsp. pepo]	[more]

BLAST of Carg27150 vs. TAIR10


Match Name	E-value	Identity	Description
AT1G05070.1	2.6e-53	56.91	Protein of unknown function (DUF1068)	[more]
AT2G32580.1	2.7e-50	55.80	Protein of unknown function (DUF1068)	[more]
AT4G04360.1	1.2e-45	55.56	Protein of unknown function (DUF1068)	[more]
AT4G30996.1	2.9e-36	48.45	Protein of unknown function (DUF1068)	[more]
AT2G24290.1	2.3e-33	46.58	Protein of unknown function (DUF1068)	[more]

BLAST of Carg27150 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of Carg27150 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A1S3C135\|A0A1S3C135_CUCME	3.8e-91	90.67	uncharacterized protein LOC103495614 isoform X1 OS=Cucumis melo OX=3656 GN=LOC10...	[more]
tr\|A0A0A0K245\|A0A0A0K245_CUCSA	7.2e-90	89.64	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G041970 PE=4 SV=1	[more]
tr\|A0A2R6QWK5\|A0A2R6QWK5_ACTCH	9.4e-74	74.74	Mast/stem cell growth factor receptor Kit like OS=Actinidia chinensis var. chine...	[more]
tr\|A0A2P5B190\|A0A2P5B190_PARAD	2.0e-71	76.47	Uncharacterized protein OS=Parasponia andersonii OX=3476 GN=PanWU01x14_280910 PE...	[more]
tr\|A0A2P5EG56\|A0A2P5EG56_9ROSA	3.3e-71	76.06	Uncharacterized protein OS=Trema orientalis OX=63057 GN=TorRG33x02_197300 PE=4 S...	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR010471	DUF1068

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg27150-RA	Carg27150-RA	mRNA

InterPro

Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 142..162
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 167..193
None	No IPR available	PANTHER	PTHR32254:SF11	EXPRESSED PROTEIN	coord: 12..191
None	No IPR available	PANTHER	PTHR32254	FAMILY NOT NAMED	coord: 12..191
IPR010471	Protein of unknown function DUF1068	PFAM	PF06364	DUF1068	coord: 12..178 e-value: 4.0E-82 score: 274.0

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Carg27150	Csa7G041970	Cucumber (Chinese Long) v2	carcuB0329
Carg27150	MELO3C018832	Melon (DHL92) v3.5.1	carmeB0304
Carg27150	ClCG02G002080	Watermelon (Charleston Gray)	carwcgB0296
Carg27150	CSPI07G03530	Wild cucumber (PI 183967)	carcpiB0335
Carg27150	Cucsa.148710	Cucumber (Gy14) v1	carcgyB0354
Carg27150	CmaCh11G018110	Cucurbita maxima (Rimu)	carcmaB0420
Carg27150	Lsi11G014320	Bottle gourd (USVL1VR-Ls)	carlsiB278
Carg27150	Cp4.1LG04g03570	Cucurbita pepo (Zucchini)	carcpeB0421
Carg27150	CsGy7G003190	Cucumber (Gy14) v2	carcgybB0315
Carg27150	MELO3C018832.2	Melon (DHL92) v3.6.1	carmedB0315
Carg27150	CsaV3_7G003420	Cucumber (Chinese Long) v3	carcucB0335
Carg27150	Cla97C02G028480	Watermelon (97103) v2	carwmbB0312
Carg27150	Bhi05G001196	Wax gourd	carwgoB0390

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Carg27150	Cucurbita moschata (Rifu)	carcmoB0415