Carg27148 (gene) Silver-seed gourd
The following sequences are available for this feature:
Legend: polypeptideCDSexonthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.ATGTCGCTGTCGAGAGTGGCATCGCCACCGCTAGGCGCTCACAATTGTCATGATCTTCCGGGGTGGACGTTAACGAAACAACGTCGTCGTTTAGTGACCCTTTTAACCTTTACTCGTTACTTCCCATTTCTGCCTCATCCGCCAAGCCGTTTGACTTCATATAAAAAGAAAAACCCATCGTTCAATTTCACGCTCTTCCTGTTCTTCTTCAGGGTCACTTCTCAAAGGCTCAACGATCTTCTTCACTGTTCGCAAGCTAAGCTCCTCAGTTTCTCCATGGCTGCTTCTGCCTCGTCCACTTTCAAGAAGATCCAAATTCAGAGGGAGGGCACTGTGAGTTCATTTCGTTTTTTGCTCTTTGATCTTCTCCCTCGGTTTGTTTTTCGCGTTTGATTTGATCTATTGCTAGTTTCTTTATCTGGTATGATTCTATTTGCTGTTTGGTCTTTGGAATAGATTTGTGGCACTGTTTTTGTTTAATGGGTCGGTTTGATTCTTGAGGATAGAGGGAGTTAACCCTATGGCCTGATAAACTCTAGATGATTTAGGGGTTTCTGGATAAAGATTATGGTCTGTGTTGTTGACTATGAATTAGCACTTTCTTTGAATCAAATGAGCATTGCCTTGCTCTGTTCCTTCCATGGAAAGGTGTTTCCATTAGAAATCATGAAATTATTTCATAGGATGGTATGATATTGTTACTTTGAGCATAAACTCTAATGGCTTTGCTTTTGGTTTCTCCAAAATGACTCATACCAATAGTGATGCATTCCTTGCCTATAAACCTATGTTTCCCTTAATTAGCCAATATGGAACTCCTCTCCCAACAATCCTCAAAAGTTTAGCAGATCGAAATTTGAATCCATAAAACTTTTCACTAAATAATTTTGTAACACCCCAAGCTCACCGCTAGTCGATATTGTCCTTTTTGGACTTTCTCGAGGAGCTTTCCCTTTCGGGCTTTCCCTCAAGGTTTTTAAAATGCGTATGTTAGGGAGAGATTTCCACACCCTTCTAAAGAATGCTTCGTTTTCCTCCCCAATCGATGTGAAATCTCACAATCCACCCCCTTTGTGCCTCCCTGTTGACACCCGTTCCCTTCTCTAATCGATGTCCCCCCCAATCCACCCACCTTTGGGCCCAATGTCCTTGCTAACACACCACCTCGTGTCCACCCCCTTCGGGGTTCAGCCTCCTCGCTGGCATATTGCTTGATATCTGGCCCTGATACCATTTGTAACAGCTCAAGCCTACCACTAGCCGATTGTCCTCTTTGGGCTTTCCCTTTCGAGCTTCCCCTCAAAGTTTTTAAAACGCGTCTACTAGGAAGATGTTTCCACTCTTTTAAAGAATGATTCATTCGCCCCCCAACTGACGTGGGATCTGACAGGTTTCGAATTTTGTTTTGTTTGGGCAGGAATTTGATGCTTATATTGTGGGGAGAGATGATGCCCCTGGAATTGTTGTGCTTCAAGAATGGTGGGGAGTGGATTATGAAGTCAAGAATCATGCTGTAAAGATCTCTGAGCTTGGTTCTGGTTTCAAAGCACTTATTCCCGAGTATGATGTCTTTTCTCCTTACGATGACAACGACGATGATGTCGATGATACAATTCGTTTACTTAGTTCTGCTGCATTCTACTGATGAATATTTCGTTTCGTGTAATTCTCATATCAGTTTGTATCGAGGTAAGGTTGGGTTAGATACCGCTGAGGCGCAACATCTGATGGATGGTCTTGATTGGCAAGGTGCTGTGAAGGATATACATGCTTCAGTCAACTGGCTCAAGGCTAATGGTTCCAAGAAGGTATTCTACATACTGTTTAGGATACTAATTGACTGTTGTCTAAAATCTTCATAATAAACTTGGATCATGCTAGGTTGGTGTAACTGGATACTGTATGGGGGGTGCTCTCTCCATTGCAAGTGCTGTGTTGATCCCTGAGGTTGATGCCGTTGTTTCATTCTATGGAGTCCCTTCACCAGAGCTTGCAGACCCTGCCCATGCTAAGGCACCCGTTCAAGCTCACTTCGGCGAGCTCGATTCCTTTGTCGGCTTCTCTGACTTGACGGTAGAACCTTTAATATTCCATTTTCTTTCTTCCATGTCATCTCTTAAGAAGTATCTCCATCATATGTTAAAGGCATTGCAAGTGGATGCATAATGTTGTTGATTGCTACAGTCTCATTACCAAATGTGAGATCTCACATCGGTCGGAGAGGGGAACGAATCAATCCTTACAAGGGTGTGGAAACCTCTCCCTAGTAGACGCGTTTTAAAACCATGAGGATGACGGCGATACGTAAACGGGCCAAAGCGGACAATATCTGCTAGTGGTGGGCTTGAGCTGTTACTATTGGTATCAGAGCCAAACACCGGGTGGTGTTCCAGCGAGGATGCTGGGCCCCCAAGGGGGGTGAATTGTGAAATCCCACATCGGTTGGAGAGGGGAACGAAGCATTCCTTATAAGGGTGTGAAAACCTCTGTTAGCGGTGAGCTTGAGCTGATACAATTAGTGTTTGAAGTAAAGGCATTGCAAGTGCTCGATACACAATGTTGTTGGTTGCTACGGTCTCGTTACCGAATCTCGCTATTCAAATCCACTTCGTGTTTTCTATTCGGTTAACATACGCTGACAAGAATATGCAGCGATCCGGTGTTTTACGTGATACAATTATACAAGATAAAGGAGTATAATGAGCTCGAGTTCTTTTCAGGCTGCCAAGAAACTGGAGGAAAAGCTAAAACAATCAGGAGTTCCACATGAGGTGCATATCTATAAAGGAAGTGGACATGCTTTCATGAACCGATCCGAAGAAGGTGTGAAGAGGAGGAAGAACATGGGAATGCTCGACGAGGACGATAACGCAGTCGAACTAGCATGGTCTCGCTTCCAGTCATGGATGTCGCAATACCTCTCAGCTTAAACTGGTTCGTTTTCGGTTCAATTCGCCCTTTTATCTTAATTAGCTTCCTAGTTCATGGCTCATTACATAAGCTTGTTTGCATTCCTGGGCACTGTTTGTTAAACTGGAATCCAACTTCTGAATTGTGTTGCTTTGTGGAGTATGCTTGTTGAAAGTTCATGAATAGATCAATATGGTCTCTGTATGTGTTTGAATTATGAACTCCTGCAGGTCTCGAATCGTTTGTTTGTAATAATTTCGTCTCTAAACTTTAAAGTATTATCATTTAGTGCTTAGACTTTAACATGTAACCATTAATCTATCTACTTCAAAATTTGTAACAATTTAATTCTGGTCGTGAAAACACTTAGCTATTGTAGTTTATGAACTCATTTAGGGCATGTTTGGAAGTGACTTTGAAATGTTCAAATCACTTCGAGGTCATTGACTTATGTATTAGAAGTCAATCAGTGCCCAAAAAAGGGTTTTGGTCTCGGCCAATTATCGAGTTGTTTTTCGTCAGGGTA ATGTCGCTGTCGAGAGTGGCATCGCCACCGCTAGGCGCTCACAATTGTCATGATCTTCCGGGGTGGACGTTAACGAAACAACGTCGTCGTTTAGTGACCCTTTTAACCTTTACTCGTTACTTCCCATTTCTGCCTCATCCGCCAAGCCGTTTGACTTCATATAAAAAGAAAAACCCATCGTTCAATTTCACGCTCTTCCTGTTCTTCTTCAGGGTCACTTCTCAAAGGCTCAACGATCTTCTTCACTGTTCGCAAGCTAAGCTCCTCAGTTTCTCCATGGCTGCTTCTGCCTCGTCCACTTTCAAGAAGATCCAAATTCAGAGGGAGGGCACTATCTCTGAGCTTGGTTCTGGTTTCAAAGCACTTATTCCCGATTTGTATCGAGGTAAGGTTGGGTTAGATACCGCTGAGGCGCAACATCTGATGGATGGTCTTGATTGGCAAGGTGCTGTGAAGGATATACATGCTTCAGTCAACTGGCTCAAGGCTAATGGTTCCAAGAAGGTTGGTGTAACTGGATACTGTATGGGGGGTGCTCTCTCCATTGCAAGTGCTGTGTTGATCCCTGAGGTTGATGCCGTTGTTTCATTCTATGGAGTCCCTTCACCAGAGCTTGCAGACCCTGCCCATGCTAAGGCACCCGTTCAAGCTCACTTCGGCGAGCTCGATTCCTTTGTCGGCTTCTCTGACTTGACGGCTGCCAAGAAACTGGAGGAAAAGCTAAAACAATCAGGAGTTCCACATGAGGTGCATATCTATAAAGGAAGTGGACATGCTTTCATGAACCGATCCGAAGAAGGTGTGAAGAGGAGGAAGAACATGGGAATGCTCGACGAGGACGATAACGCAGTCGAACTAGCATGGTCTCGCTTCCAGTCATGGATGTCGCAATACCTCTCAGCTTAAACTGGTTCGTTTTCGGTTCAATTCGCCCTTTTATCTTAATTAGCTTCCTAGTTCATGGCTCATTACATAAGCTTGTTTGCATTCCTGGGCACTGTTTGTTAAACTGGAATCCAACTTCTGAATTGTGTTGCTTTGTGGAGTATGCTTGTTGAAAGTTCATGAATAGATCAATATGGTCTCTGTATGTGTTTGAATTATGAACTCCTGCAGGTCTCGAATCGTTTGTTTGTAATAATTTCGTCTCTAAACTTTAAAGTATTATCATTTAGTGCTTAGACTTTAACATGTAACCATTAATCTATCTACTTCAAAATTTGTAACAATTTAATTCTGGTCGTGAAAACACTTAGCTATTGTAGTTTATGAACTCATTTAGGGCATGTTTGGAAGTGACTTTGAAATGTTCAAATCACTTCGAGGTCATTGACTTATGTATTAGAAGTCAATCAGTGCCCAAAAAAGGGTTTTGGTCTCGGCCAATTATCGAGTTGTTTTTCGTCAGGGTA ATGTCGCTGTCGAGAGTGGCATCGCCACCGCTAGGCGCTCACAATTGTCATGATCTTCCGGGGTGGACGTTAACGAAACAACGTCGTCGTTTAGTGACCCTTTTAACCTTTACTCGTTACTTCCCATTTCTGCCTCATCCGCCAAGCCGTTTGACTTCATATAAAAAGAAAAACCCATCGTTCAATTTCACGCTCTTCCTGTTCTTCTTCAGGGTCACTTCTCAAAGGCTCAACGATCTTCTTCACTGTTCGCAAGCTAAGCTCCTCAGTTTCTCCATGGCTGCTTCTGCCTCGTCCACTTTCAAGAAGATCCAAATTCAGAGGGAGGGCACTATCTCTGAGCTTGGTTCTGGTTTCAAAGCACTTATTCCCGATTTGTATCGAGGTAAGGTTGGGTTAGATACCGCTGAGGCGCAACATCTGATGGATGGTCTTGATTGGCAAGGTGCTGTGAAGGATATACATGCTTCAGTCAACTGGCTCAAGGCTAATGGTTCCAAGAAGGTTGGTGTAACTGGATACTGTATGGGGGGTGCTCTCTCCATTGCAAGTGCTGTGTTGATCCCTGAGGTTGATGCCGTTGTTTCATTCTATGGAGTCCCTTCACCAGAGCTTGCAGACCCTGCCCATGCTAAGGCACCCGTTCAAGCTCACTTCGGCGAGCTCGATTCCTTTGTCGGCTTCTCTGACTTGACGGCTGCCAAGAAACTGGAGGAAAAGCTAAAACAATCAGGAGTTCCACATGAGGTGCATATCTATAAAGGAAGTGGACATGCTTTCATGAACCGATCCGAAGAAGGTGTGAAGAGGAGGAAGAACATGGGAATGCTCGACGAGGACGATAACGCAGTCGAACTAGCATGGTCTCGCTTCCAGTCATGGATGTCGCAATACCTCTCAGCTTAA MSLSRVASPPLGAHNCHDLPGWTLTKQRRRLVTLLTFTRYFPFLPHPPSRLTSYKKKNPSFNFTLFLFFFRVTSQRLNDLLHCSQAKLLSFSMAASASSTFKKIQIQREGTISELGSGFKALIPDLYRGKVGLDTAEAQHLMDGLDWQGAVKDIHASVNWLKANGSKKVGVTGYCMGGALSIASAVLIPEVDAVVSFYGVPSPELADPAHAKAPVQAHFGELDSFVGFSDLTAAKKLEEKLKQSGVPHEVHIYKGSGHAFMNRSEEGVKRRKNMGMLDEDDNAVELAWSRFQSWMSQYLSA
BLAST of Carg27148 vs. NCBI nr
Match: XP_023529510.1 (uncharacterized protein LOC111792345 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 568.9 bits (1465), Expect = 1.0e-158 Identity = 292/335 (87.16%), Postives = 295/335 (88.06%), Query Frame = 0
BLAST of Carg27148 vs. NCBI nr
Match: XP_022930730.1 (uncharacterized protein LOC111437122 [Cucurbita moschata]) HSP 1 Score: 399.4 bits (1025), Expect = 1.1e-107 Identity = 208/243 (85.60%), Postives = 209/243 (86.01%), Query Frame = 0
BLAST of Carg27148 vs. NCBI nr
Match: XP_022988921.1 (uncharacterized protein LOC111486131 [Cucurbita maxima]) HSP 1 Score: 394.4 bits (1012), Expect = 3.4e-106 Identity = 205/243 (84.36%), Postives = 207/243 (85.19%), Query Frame = 0
BLAST of Carg27148 vs. NCBI nr
Match: XP_022952350.1 (uncharacterized protein LOC111455058 [Cucurbita moschata]) HSP 1 Score: 372.5 bits (955), Expect = 1.4e-99 Identity = 193/244 (79.10%), Postives = 204/244 (83.61%), Query Frame = 0
BLAST of Carg27148 vs. NCBI nr
Match: XP_022136233.1 (uncharacterized protein LOC111007979 [Momordica charantia]) HSP 1 Score: 372.1 bits (954), Expect = 1.8e-99 Identity = 194/244 (79.51%), Postives = 203/244 (83.20%), Query Frame = 0
BLAST of Carg27148 vs. TAIR10
Match: AT2G32520.1 (alpha/beta-Hydrolases superfamily protein) HSP 1 Score: 322.4 bits (825), Expect = 3.0e-88 Identity = 165/238 (69.33%), Postives = 182/238 (76.47%), Query Frame = 0
BLAST of Carg27148 vs. Swiss-Prot
Match: sp|P46209|USF_AQUPY (Protein usf OS=Aquifex pyrophilus OX=2714 GN=usf PE=4 SV=1) HSP 1 Score: 83.2 bits (204), Expect = 5.5e-15 Identity = 63/192 (32.81%), Postives = 93/192 (48.44%), Query Frame = 0
BLAST of Carg27148 vs. Swiss-Prot
Match: sp|O67802|DLHH_AQUAE (Putative carboxymethylenebutenolidase OS=Aquifex aeolicus (strain VF5) OX=224324 GN=aq_1997 PE=3 SV=1) HSP 1 Score: 73.9 bits (180), Expect = 3.3e-12 Identity = 52/159 (32.70%), Postives = 80/159 (50.31%), Query Frame = 0
BLAST of Carg27148 vs. Swiss-Prot
Match: sp|Q6P7K0|CMBL_XENTR (Carboxymethylenebutenolidase homolog OS=Xenopus tropicalis OX=8364 GN=cmbl PE=2 SV=1) HSP 1 Score: 60.8 bits (146), Expect = 2.9e-08 Identity = 51/189 (26.98%), Postives = 83/189 (43.92%), Query Frame = 0
BLAST of Carg27148 vs. Swiss-Prot
Match: sp|P0A115|CLCD_PSEKB (Carboxymethylenebutenolidase OS=Pseudomonas knackmussii (strain DSM 6978 / LMG 23759 / B13) OX=1301098 GN=clcD PE=1 SV=1) HSP 1 Score: 58.9 bits (141), Expect = 1.1e-07 Identity = 54/185 (29.19%), Postives = 80/185 (43.24%), Query Frame = 0
BLAST of Carg27148 vs. Swiss-Prot
Match: sp|P0A114|CLCD_PSEPU (Carboxymethylenebutenolidase OS=Pseudomonas putida OX=303 GN=clcD PE=1 SV=1) HSP 1 Score: 58.9 bits (141), Expect = 1.1e-07 Identity = 54/185 (29.19%), Postives = 80/185 (43.24%), Query Frame = 0
BLAST of Carg27148 vs. TrEMBL
Match: tr|A0A0A0K247|A0A0A0K247_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G043010 PE=4 SV=1) HSP 1 Score: 370.5 bits (950), Expect = 3.5e-99 Identity = 194/251 (77.29%), Postives = 207/251 (82.47%), Query Frame = 0
BLAST of Carg27148 vs. TrEMBL
Match: tr|A0A1S3C0H7|A0A1S3C0H7_CUCME (protein usf OS=Cucumis melo OX=3656 GN=LOC103495610 PE=4 SV=1) HSP 1 Score: 367.9 bits (943), Expect = 2.2e-98 Identity = 193/251 (76.89%), Postives = 206/251 (82.07%), Query Frame = 0
BLAST of Carg27148 vs. TrEMBL
Match: tr|F6HIC8|F6HIC8_VITVI (Uncharacterized protein OS=Vitis vinifera OX=29760 GN=VIT_12s0059g00890 PE=4 SV=1) HSP 1 Score: 345.1 bits (884), Expect = 1.6e-91 Identity = 180/235 (76.60%), Postives = 197/235 (83.83%), Query Frame = 0
BLAST of Carg27148 vs. TrEMBL
Match: tr|A0A200QH44|A0A200QH44_9MAGN (Dienelactone hydrolase OS=Macleaya cordata OX=56857 GN=BVC80_9101g317 PE=4 SV=1) HSP 1 Score: 335.5 bits (859), Expect = 1.2e-88 Identity = 173/242 (71.49%), Postives = 188/242 (77.69%), Query Frame = 0
BLAST of Carg27148 vs. TrEMBL
Match: tr|A5AEX6|A5AEX6_VITVI (Uncharacterized protein OS=Vitis vinifera OX=29760 GN=VITISV_041925 PE=4 SV=1) HSP 1 Score: 335.1 bits (858), Expect = 1.6e-88 Identity = 176/242 (72.73%), Postives = 191/242 (78.93%), Query Frame = 0
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene: None |