Carg27143 (gene) Silver-seed gourd
The following sequences are available for this feature:
Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGGCAGCACGTAATGTTTTGTCTCTATCAGAAAAAGGAGCACGTCTTTTCGTTACAAGATTTTTTAGTCGATACATATCGACCGGATCATTAACGTAAGTGAACACGATACAATATTCAAGTGTTTGTTTTTAATGAGAATTTATATTGGTTATAATAAATTTAATGACAGTATAATGGAAGATGGGGAGAAATATTTACCTTTGAGGGAACTATAAGTAACAGCTTCCAACGTAAGGTTGTTTTAAAAGTTCACAGCCCTAAGTTTTATTGGAAGGTAATTTAATTTTTATTTTTTATTTTTTATTTTTTATTTTTTTAAAAAATGGTTGAAAAAAAAAGATAAAATATAAATAATTTTGGCAGGTTATAAGAGAAGCTGACTTAGGACTTGCAAATGCATATATTAATGGAGATTTTTCATTAATGGATAAAGAAGAAGGTCTTCTTAACCTTATTTTGGTGAGTTTAGTTACTTCGTAATTAAGGTGGTTAATGATAGCCTTTCGTTCATGCTTACCTTCTCTTTTGCAACTTTTCATTGCAAATAACGATATACTAAATAAGACAACAAGGTATGTCAAATAGAATTATGAGATTACTAATAGATATTGTTTGCTTTAGTTCGTTACATTGTCAGCCTCAGCATCTTAAAACGTGTCTGTCAGACAGAGGTTTCTACACCCATATAAAGAATATTTCATTCTACTCATAGTGATCTACTTTTTTGTAGGAGATGGTGGTCTCCTCCACTATTTACCGCAACTATAGCATCTGCAAAGTATTTCTTTCAGCATACTTTGAGAAAGAACACCATTGCACAAGCTCGTAAAAATATTTCTCGTCATTATGACTTGGTATTATATGGATTAATCATTTTTTTTTTGTTTTGTTTTTAGTCTCTCCAATCTCATTCTTGTACTACAATACTTTGATTTAATCAAAACAAAACTAGAATGTGTAATGGTTCAAGCCCGCTTCTACAAAATATTGTCCTCTTTGAACTTTCCCTTTCAAGATTCTCCTCAAGGTTTTTAAAACGTGTCTGCTAGTGAGAGGTTTCTACACCCTTATAAAGAATGCTTCGTTCTCCTACCAAACCGATTTGGGATCTCACAGTAAGAATTTGAAATAATGGTTAAAAAAGACTTACAAGAATTGATGGCTATAACTTATATCAATAATATACACTTCCTTTTCAGTGAGTTAATCACAGGAACTTTAAAATTAAGCATGTTTAGGTATGAACAATCTAGGTTGAGTCACATTTTGAAAAGTTTCATAGAAATCATGTGAGTGAGAATAAAACAGCCTAAACGAACCCATTTTGATTTCTAGGGATAGTATTCCGTCTTAGAAGTAATTCATGTAAGATAGATAACTTGGTCATGTTGTAGGAGATGTAAGTAAAAGTCAAAGCCATTAAATATCCGGTGTTGAATCTTGGTACGAATCCTATACGTTCAATATTAAATTATTCTCTTGTTTTGTAAGAACTTCAACATTCTTATTGAATAATTTATTTGGTTGTACAGAGCAATGAACTTTTTTCTCTCTTCTTGGATGATACAATGATGTACTCATGTGCCCTCTTTAAGGTTCGTATAACCAACTTTTATTTATTAAAAATTTGATAATCTATAATGATAATGTTTTGTTTTTGCATTATTTTCTTAACAAAGAGGGAAGATGAAGATTTGAAGACGGCACAATTGAGGAAAATCTGTGTTCTTATTAAGAAGGTGATTATTATATTATTACCCAACTAAACATATTTTAAGTTACCTAATCCTTACTTCTTAATAGGCAAGAATCAACAAAAAGCATAATCTTGGGTGTGGTTGGGGAATTTTAGCTATTGAAATAGTTAAGCAAACTGGATGTCACTCCACTGCCATTACTTTGTCCCAACAACAATTGCAATATGCCCAAAAAAGAGTTCAACATCTTGGCCTTCAGGTAATATCTCTTTCTTATGTGCTTATTTTACTTCTTTCGCTTCTTGTTTATCAAATATATTTGATAAGACAAAGCAATTTAGGTCACATTGTGTGAGATCCCACAATGGTTGTGCCTATTTTACTTCTTTCGATTCTTGTTTATCAAATGTATTCGATAAGACAAAGCAATTTAGGTCACATTGTGTGAGACCCCTCATTTGTTGTGCATATTTTACTTCTTTCGATTCTTGTTTATCAAATCTATTCGATAAGACAAAGCAATTTAGGTCACATTGTGTGAGATCCCACATTGGTTGGGAAAAAAAAAAACGAAACATTTTATATAAGGGTGTGATAACCTCTCCCTAGCAAAAATGTATTAAAAATCTTGAAGGGAACTCGAAAGGGAAAACCCAAAGTGGACAATATCTATTAGTACAAGTGTTTTAAAATATATTCGATTGAACAAAGCAGCTTTGGTCACATTGCGTGTGATCCCACATCGGTTGGGGAGAAAAAACGAAACATTTTTCTTATAAGGGTGTGAAAACTTCTCTCCAGCAAATGCGTTTTAAAAATCTTCAGGGGAAGCTCGAGAGGGAAATCTCCATCTTAAGAGGAAGATCAAAAGGGAAAGCCCAAAAAGGACATATCCGCTAGTAGATACCTTTTAAAATATATTCGATTAAACAAAGCCGCTTAGGTTACATTGTGTGTGATCCCACGTTTTACAAATGCATTGGATAACAATTTAGTTATTTTAGTTTTTGTTTTTGAATTGTGCTTAATTGTTTTCACAATTTCTCACTGAACTCTTAGTGAACAATTTTCAATACTACTTTAGGGCGGGCAAGCAGGGCAGGAGTGTCTGGTAAATTTATCTTGGTTCATGACCTAAAAGTAGCATATCGATTACTTAAAAATTAAAGGCCACGTGAAGCTTATTTGAATCATGATTTTAGGGTAGCCTCTTGACTACTTAAAAATCAGGAGCTAACTTTGAGCCAATATTGAGTCAGAGTAGCTTCTTGGTTACTTAACAAACTAAGGACTATTTTGAAGTTTATTTCGAGGTAGCATGATTATATAAAAATCAAGGGCTAACCTTAAGCTCATCTTGATTTAACACAGTCTTCTGGTTAATTAAAAATCAAGAGCTAACTATAAGGGTATCATGAAGCTTATAACACACTCTTGCCTTGGCATGCCAGATGCGAGGCCCTAGAGTGATCATAAATTGTAGCACTTCAGGATCATTTACATGCATAAATATCAGGGTTAACCATTAAAGACATTTTAGTCATTTTCCTACAACCTTAACATATATCCCGAACTTGATTTAGGTTTTAAACTTGATCCAAACATCTTAAAATCTTAGGTTACCTTTCTTAGTTGTTGTTTGAGTTTTTGGTACCCAAATTGTTCCAATTTTTCTTTTCTTTTACGGGACCCTTGATATGCCTAGTTTTAGGAACCATAAATAAATTAATGAGAACCAATATGGGACGGGTCTAATAATAAGTAGAAAGCTCAAAATGTGGATACCTTTAACTTTTATTGTCAAAGTTTGACCATTGACTTTAGTTTTGCCGTTGTACAAATTTATCTAGACCTCAAATTAACTCAAATTCTTAATGAAACTTAAATATAATACTCTAAGGAGGAAGTAGTGACTGATTTCATATCTTTTCATGTAGAGTAGCTCAAGATATAAACCTCGAATATTTGTTAAAATACACAACTTTTACCATAGAAAACCCTATAATTTTTTTTTATTACTGGTTTGGACGATTCAAGTAAGCACAGATTCCTTCATAAAGTTTTTTCTTCTTCTTCCTCTCAAGCTTAAGAATTTATTTTGAGAAGATAAATTGGTGTAGCTTCTTCCATTTTTTTGTTCAAAGCTCTTTGATTCTTACTCATTTTCTACGCGATTTTTGAACTTATTGATTAAAACGATAGGGACATCTTTACCTCCCGATTTCTTCATGAAATTTTCTTCACTCATTGTCATGAAGCTAATGGTATCCATTAATTTGAGTTCAAAGGACCACAAGTGAAGAAATTGGAATTTTTCCCATATTCATAAAAAATGGACCCGAGGAAAACTTTCTTCGATTACCCTTATTCCTTACTTCTTTAGCTTTCATGGATCTACATGAAAAATGTTGCTTGATATCCTAGAAAACGAATTTGTGTGTAGCCACCAATTGCATTTTTGGGTTTGGGGGAATACGTTTGGAACACTTTCCGCTCTTGAATCCTTCCTAAAATTAGTTGGAAAATTCATTTAAAACGTGTAGGAGTTGGTTTAAGGAAGTTTGATGAAGTATACCTCCTAAATTTTAAAAAATTTGAGAGCAATAAAATTCATAATATAAAAACTTTAAACTTAAAGTTTTAAGAATTCTCATGGCTTGAATCTTGTCCCAAATCATTGCCCATAAATTTTTATTTATAAATAAAGCTGGCACAAGTCAAGCAAAATTTCAACTTTTTAAGTGTGCGAATAATCCTATATATATATCAAATAATATTTCAAATTATGACACACTTGTAATTATTTGATCTAACCTGTTTGTAGGATCACATTGAATTTCTTCTTTGCGACTATCGAGAATTGTCCAATACTACTAAATATGATAGAATCCTATCATGGTGAGTTTTCAAATAAAATAAAGTTATTATCAATAATATCTATACATTATTCGATTAAATTATAGATTTAATATCTAAACCTGCTATCTATATATATATATTTTTTTTTGTTCAATGACATCAAAACTTACTTATTAAACTTTTAACTATAATTTCATAAGTTATTATTTATTAGACATAAAAATTAAAAAATTAAACTAAATTTGTAATTTAACTTGGCAGCGAAATGATAGAAGCTGTCGGCCACGAATTTATGGAAGATTTTTTTGGTACTTGTGAATCAGTGTTAGAGGAAAATGGTCTTCTTGTTCTACGGGTTCAATTATTTATTTATTTTTTTGAACTTTTTATTGATAATTAATTTTTTTAATTACTCTTTATTTATCATTATTATTATTATTATTATTTTGCATTAGTTCACATCAGTGCCAGACGAGTCTTACGAAGAGCATCGGCTAAGCGCTGGTTTTATAAAAGAATATATATTTCAAGGAGGATGTCTTCTATCGTTAAGTAGAATAACAACAGCCATGACTTCTGCATCGAAGGCTTTGGTAAATAATTCATATATCTTCTTCATTTTCAACAATAATTATTAACATATAATGAAAAAAAATCCTTTGGGTATAGTGTGGAGCACTTGGAAAATATCTGAATTCATTACTATCAAACATTGAAGTGTTGGAGAAAGAATTTCTTGAACAATCAAAG ATGGCAGCACGTAATGTTTTGTCTCTATCAGAAAAAGGAGCACGTCTTTTCGTTACAAGATTTTTTAGTCGATACATATCGACCGGATCATTAACATGGGGAGAAATATTTACCTTTGAGGGAACTATAAGTAACAGCTTCCAACGTAAGGTTGTTTTAAAAGTTCACAGCCCTAAGTTTTATTGGAAGGTTATAAGAGAAGCTGACTTAGGACTTGCAAATGCATATATTAATGGAGATTTTTCATTAATGGATAAAGAAGAAGGTCTTCTTAACCTTATTTTGAGGGAAGATGAAGATTTGAAGACGGCACAATTGAGGAAAATCTGTGTTCTTATTAAGAAGGCAAGAATCAACAAAAAGCATAATCTTGGGTGTGGTTGGGGAATTTTAGCTATTGAAATAGTTAAGCAAACTGGATGTCACTCCACTGCCATTACTTTGTCCCAACAACAATTGCAATATGCCCAAAAAAGAGTTCAACATCTTGGCCTTCAGGATCACATTGAATTTCTTCTTTGCGACTATCGAGAATTGTCCAATACTACTAAATATGATAGAATCCTATCATGCGAAATGATAGAAGCTGTCGGCCACGAATTTATGGAAGATTTTTTTGGTACTTGTGAATCAGTAATAACAACAGCCATGACTTCTGCATCGAAGGCTTTGTGTGGAGCACTTGGAAAATATCTGAATTCATTACTATCAAACATTGAAGTGTTGGAGAAAGAATTTCTTGAACAATCAAAG ATGGCAGCACGTAATGTTTTGTCTCTATCAGAAAAAGGAGCACGTCTTTTCGTTACAAGATTTTTTAGTCGATACATATCGACCGGATCATTAACATGGGGAGAAATATTTACCTTTGAGGGAACTATAAGTAACAGCTTCCAACGTAAGGTTGTTTTAAAAGTTCACAGCCCTAAGTTTTATTGGAAGGTTATAAGAGAAGCTGACTTAGGACTTGCAAATGCATATATTAATGGAGATTTTTCATTAATGGATAAAGAAGAAGGTCTTCTTAACCTTATTTTGAGGGAAGATGAAGATTTGAAGACGGCACAATTGAGGAAAATCTGTGTTCTTATTAAGAAGGCAAGAATCAACAAAAAGCATAATCTTGGGTGTGGTTGGGGAATTTTAGCTATTGAAATAGTTAAGCAAACTGGATGTCACTCCACTGCCATTACTTTGTCCCAACAACAATTGCAATATGCCCAAAAAAGAGTTCAACATCTTGGCCTTCAGGATCACATTGAATTTCTTCTTTGCGACTATCGAGAATTGTCCAATACTACTAAATATGATAGAATCCTATCATGCGAAATGATAGAAGCTGTCGGCCACGAATTTATGGAAGATTTTTTTGGTACTTGTGAATCAGTAATAACAACAGCCATGACTTCTGCATCGAAGGCTTTGTGTGGAGCACTTGGAAAATATCTGAATTCATTACTATCAAACATTGAAGTGTTGGAGAAAGAATTTCTTGAACAATCAAAG MAARNVLSLSEKGARLFVTRFFSRYISTGSLTWGEIFTFEGTISNSFQRKVVLKVHSPKFYWKVIREADLGLANAYINGDFSLMDKEEGLLNLILREDEDLKTAQLRKICVLIKKARINKKHNLGCGWGILAIEIVKQTGCHSTAITLSQQQLQYAQKRVQHLGLQDHIEFLLCDYRELSNTTKYDRILSCEMIEAVGHEFMEDFFGTCESVITTAMTSASKALCGALGKYLNSLLSNIEVLEKEFLEQSK
BLAST of Carg27143 vs. NCBI nr
Match: XP_022974372.1 (uncharacterized protein LOC111473008 isoform X2 [Cucurbita maxima]) HSP 1 Score: 323.2 bits (827), Expect = 8.0e-85 Identity = 177/271 (65.31%), Postives = 193/271 (71.22%), Query Frame = 0
BLAST of Carg27143 vs. NCBI nr
Match: XP_022973879.1 (uncharacterized protein LOC111472470 isoform X1 [Cucurbita maxima]) HSP 1 Score: 320.9 bits (821), Expect = 4.0e-84 Identity = 176/271 (64.94%), Postives = 192/271 (70.85%), Query Frame = 0
BLAST of Carg27143 vs. NCBI nr
Match: XP_022974371.1 (uncharacterized protein LOC111473008 isoform X1 [Cucurbita maxima]) HSP 1 Score: 315.1 bits (806), Expect = 2.2e-82 Identity = 177/292 (60.62%), Postives = 193/292 (66.10%), Query Frame = 0
BLAST of Carg27143 vs. NCBI nr
Match: XP_022932947.1 (uncharacterized protein LOC111439562 isoform X2 [Cucurbita moschata]) HSP 1 Score: 313.9 bits (803), Expect = 4.9e-82 Identity = 174/271 (64.21%), Postives = 190/271 (70.11%), Query Frame = 0
BLAST of Carg27143 vs. NCBI nr
Match: XP_022973880.1 (uncharacterized protein LOC111472470 isoform X2 [Cucurbita maxima]) HSP 1 Score: 312.8 bits (800), Expect = 1.1e-81 Identity = 176/292 (60.27%), Postives = 192/292 (65.75%), Query Frame = 0
BLAST of Carg27143 vs. TAIR10
Match: AT3G23510.1 (Cyclopropane-fatty-acyl-phospholipid synthase) HSP 1 Score: 227.6 bits (579), Expect = 8.3e-60 Identity = 133/293 (45.39%), Postives = 168/293 (57.34%), Query Frame = 0
BLAST of Carg27143 vs. TAIR10
Match: AT3G23530.1 (Cyclopropane-fatty-acyl-phospholipid synthase) HSP 1 Score: 227.3 bits (578), Expect = 1.1e-59 Identity = 133/293 (45.39%), Postives = 168/293 (57.34%), Query Frame = 0
BLAST of Carg27143 vs. TAIR10
Match: AT3G23470.1 (Cyclopropane-fatty-acyl-phospholipid synthase) HSP 1 Score: 218.8 bits (556), Expect = 3.9e-57 Identity = 127/296 (42.91%), Postives = 164/296 (55.41%), Query Frame = 0
BLAST of Carg27143 vs. TAIR10
Match: AT3G23480.2 (Cyclopropane-fatty-acyl-phospholipid synthase) HSP 1 Score: 196.8 bits (499), Expect = 1.6e-50 Identity = 120/273 (43.96%), Postives = 153/273 (56.04%), Query Frame = 0
BLAST of Carg27143 vs. TAIR10
Match: AT3G23460.1 (S-adenosyl-L-methionine-dependent methyltransferases superfamily protein) HSP 1 Score: 100.9 bits (250), Expect = 1.2e-21 Identity = 53/93 (56.99%), Postives = 67/93 (72.04%), Query Frame = 0
BLAST of Carg27143 vs. Swiss-Prot
Match: sp|O53732|UFAA1_MYCTU (Tuberculostearic acid methyltransferase UfaA1 OS=Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv) OX=83332 GN=ufaA1 PE=1 SV=3) HSP 1 Score: 68.9 bits (167), Expect = 8.9e-11 Identity = 44/128 (34.38%), Postives = 69/128 (53.91%), Query Frame = 0
BLAST of Carg27143 vs. Swiss-Prot
Match: sp|P31049|FAMT_PSEPU (Probable fatty acid methyltransferase OS=Pseudomonas putida OX=303 PE=3 SV=1) HSP 1 Score: 67.8 bits (164), Expect = 2.0e-10 Identity = 38/105 (36.19%), Postives = 59/105 (56.19%), Query Frame = 0
BLAST of Carg27143 vs. Swiss-Prot
Match: sp|I1RJD6|C9MT1_GIBZE (Sphingolipid C9-methyltransferase 1 OS=Gibberella zeae (strain PH-1 / ATCC MYA-4620 / FGSC 9075 / NRRL 31084) OX=229533 GN=MT1 PE=3 SV=1) HSP 1 Score: 66.2 bits (160), Expect = 5.8e-10 Identity = 42/145 (28.97%), Postives = 69/145 (47.59%), Query Frame = 0
BLAST of Carg27143 vs. Swiss-Prot
Match: sp|Q5APD4|C9MT_CANAL (Sphingolipid C9-methyltransferase OS=Candida albicans (strain SC5314 / ATCC MYA-2876) OX=237561 GN=MTS1 PE=1 SV=1) HSP 1 Score: 57.8 bits (138), Expect = 2.1e-07 Identity = 39/133 (29.32%), Postives = 64/133 (48.12%), Query Frame = 0
BLAST of Carg27143 vs. Swiss-Prot
Match: sp|O69687|FAMT_MYCTU (Probable fatty acid methyltransferase Rv3720 OS=Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv) OX=83332 GN=Rv3720 PE=1 SV=4) HSP 1 Score: 51.2 bits (121), Expect = 1.9e-05 Identity = 34/121 (28.10%), Postives = 63/121 (52.07%), Query Frame = 0
BLAST of Carg27143 vs. TrEMBL
Match: tr|A0A1R3JKK2|A0A1R3JKK2_9ROSI (Mycolic acid cyclopropane synthase OS=Corchorus olitorius OX=93759 GN=COLO4_15937 PE=4 SV=1) HSP 1 Score: 272.7 bits (696), Expect = 8.2e-70 Identity = 138/215 (64.19%), Postives = 168/215 (78.14%), Query Frame = 0
BLAST of Carg27143 vs. TrEMBL
Match: tr|A0A0A0LIH1|A0A0A0LIH1_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G171940 PE=4 SV=1) HSP 1 Score: 253.1 bits (645), Expect = 6.7e-64 Identity = 145/294 (49.32%), Postives = 174/294 (59.18%), Query Frame = 0
BLAST of Carg27143 vs. TrEMBL
Match: tr|A0A1S3CCZ3|A0A1S3CCZ3_CUCME (cyclopropane-fatty-acyl-phospholipid synthase-like isoform X3 OS=Cucumis melo OX=3656 GN=LOC103499444 PE=4 SV=1) HSP 1 Score: 250.4 bits (638), Expect = 4.4e-63 Identity = 143/294 (48.64%), Postives = 173/294 (58.84%), Query Frame = 0
BLAST of Carg27143 vs. TrEMBL
Match: tr|A0A1S3CCJ0|A0A1S3CCJ0_CUCME (uncharacterized protein LOC103499444 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103499444 PE=4 SV=1) HSP 1 Score: 250.4 bits (638), Expect = 4.4e-63 Identity = 143/294 (48.64%), Postives = 173/294 (58.84%), Query Frame = 0
BLAST of Carg27143 vs. TrEMBL
Match: tr|A0A1S3CD26|A0A1S3CD26_CUCME (uncharacterized protein LOC103499444 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103499444 PE=4 SV=1) HSP 1 Score: 250.4 bits (638), Expect = 4.4e-63 Identity = 143/294 (48.64%), Postives = 173/294 (58.84%), Query Frame = 0
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene: None |