Carg27092 (gene) Silver-seed gourd

Overview
NameCarg27092
Typegene
OrganismCucurbita argyrosperma (Silver-seed gourd)
DescriptionJasmonate-induced protein
LocationCucurbita_argyrosperma_scaffold_403 : 70010 .. 70891 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCATGCAACGTGTTCGGCGATCCAATTACATATTCGAGTTTGGAAAGAATGTCGGAATACGTTGGAAAGGAGAAAAGAAGTGAAGATAGGGCATACGTGGCATTACAATTGAAGAATGTTGGAGCAAAAGGTAAGAATGCGCTTGAATACTTGGAGAAGTTGAATGCACAATGGGGAACCGAAGTCTCAACAATGGGCTTAATTTACAACGCTACTGGAAATGCCATAAAGCTTTTGAAAACTCATGATTGGCATGGTTGTATTGGAGCTTCACCTTATCCTATTAGGATTGAAAATGGACAATGGGGTGTGTTTCTACATGTCGATACGGACTCAACAGGCTCAGAAGCTGCTGTTGTATATCGAGGCGAAAACTTGCGTGGTGTAACTACTGATTGGTTTCTATCTTGGTCTAATCCACCATCATATCACCTCACAACAAACAAGGTTTATGCTCAATTCTTAACAACATTTCTCTTTATTTTAAAAATGTTTATACCTTTTTTTTCAAACGAAAATCAATTATGTTTGTGAGATCTCATATGGATTGAAGAGGGGAATGAGTGTCAGCGAGGACGTTGGGCCCTGAAAGGGAGTGACCTGTGAGATCTCACATTGGTTGGAGAGGGGAACGAAACATTCTTTATATGGGTGTGGAAACCTCTCACTAACAGACGTGTTTTAAAACCTTGAGAGGACAATATTTGTTAGTAGACTTGAGTTGTTACAAATGGTATCAAAGCTAGACACCGAGCGGTGTGCCAACGAGGACGCTGATCCTCGAAGGGGGTAGACACTGGATGGTGTGTTAGCATGGATGCTGGGAATCGAAGAGGGGTGGACATTGGACGGTGTGCTCGCGAGGATGCTAAGCCCTGA

mRNA sequence

ATGGCATGCAACGTGTTCGGCGATCCAATTACATATTCGAGTTTGGAAAGAATGTCGGAATACGTTGGAAAGGAGAAAAGAAGTGAAGATAGGGCATACGTGGCATTACAATTGAAGAATGTTGGAGCAAAAGGTAAGAATGCGCTTGAATACTTGGAGAAGTTGAATGCACAATGGGGAACCGAAGTCTCAACAATGGGCTTAATTTACAACGCTACTGGAAATGCCATAAAGCTTTTGAAAACTCATGATTGGCATGGTTGTATTGGAGCTTCACCTTATCCTATTAGGATTGAAAATGGACAATGGGGTGTGTTTCTACATGTCGATACGGACTCAACAGGCTCAGAAGCTGCTGTTGTATATCGAGGCGAAAACTTGCGTGGTGTAACTACTGATTGGTTTCTATCTTGGTCTAATCCACCATCATATCACCTCACAACAAACAAGGGGGTAGACACTGGATGGTGTGTTAGCATGGATGCTGGGAATCGAAGAGGGGTGGACATTGGACGGTGTGCTCGCGAGGATGCTAAGCCCTGA

Coding sequence (CDS)

ATGGCATGCAACGTGTTCGGCGATCCAATTACATATTCGAGTTTGGAAAGAATGTCGGAATACGTTGGAAAGGAGAAAAGAAGTGAAGATAGGGCATACGTGGCATTACAATTGAAGAATGTTGGAGCAAAAGGTAAGAATGCGCTTGAATACTTGGAGAAGTTGAATGCACAATGGGGAACCGAAGTCTCAACAATGGGCTTAATTTACAACGCTACTGGAAATGCCATAAAGCTTTTGAAAACTCATGATTGGCATGGTTGTATTGGAGCTTCACCTTATCCTATTAGGATTGAAAATGGACAATGGGGTGTGTTTCTACATGTCGATACGGACTCAACAGGCTCAGAAGCTGCTGTTGTATATCGAGGCGAAAACTTGCGTGGTGTAACTACTGATTGGTTTCTATCTTGGTCTAATCCACCATCATATCACCTCACAACAAACAAGGGGGTAGACACTGGATGGTGTGTTAGCATGGATGCTGGGAATCGAAGAGGGGTGGACATTGGACGGTGTGCTCGCGAGGATGCTAAGCCCTGA

Protein sequence

MACNVFGDPITYSSLERMSEYVGKEKRSEDRAYVALQLKNVGAKGKNALEYLEKLNAQWGTEVSTMGLIYNATGNAIKLLKTHDWHGCIGASPYPIRIENGQWGVFLHVDTDSTGSEAAVVYRGENLRGVTTDWFLSWSNPPSYHLTTNKGVDTGWCVSMDAGNRRGVDIGRCAREDAKP
Homology
[Close]
BLAST of Carg27092 vs. NCBI nr
Match: XP_022961400.1 (23 kDa jasmonate-induced protein-like [Cucurbita moschata] >XP_022961401.1 23 kDa jasmonate-induced protein-like [Cucurbita moschata])

HSP 1 Score: 313.5 bits (802), Expect = 4.5e-82
Identity = 147/150 (98.00%), Postives = 148/150 (98.67%), Query Frame = 0 

Query: 1   MACNVFGDPITYSSLERMSEYVGKEKRSEDRAYVALQLKNVGAKGKNALEYLEKLNAQWG 60
           MACNVFGDPITYSSLERMSEYVGKEKRSEDRAYVALQLKNVGAKGKNALEYLEKLNAQWG
Sbjct: 1   MACNVFGDPITYSSLERMSEYVGKEKRSEDRAYVALQLKNVGAKGKNALEYLEKLNAQWG 60

Query: 61  TEVSTMGLIYNATGNAIKLLKTHDWHGCIGASPYPIRIENGQWGVFLHVDTDSTGSEAAV 120
           TEVSTMGLIYNATGNAIKLLKTHDWHGCIGASP+PIRIENGQWGVFLHVDTD TGSEAAV
Sbjct: 61  TEVSTMGLIYNATGNAIKLLKTHDWHGCIGASPFPIRIENGQWGVFLHVDTDLTGSEAAV 120

Query: 121 VYRGENLRGVTTDWFLSWSNPPSYHLTTNK 151
           VYRGENLRGVTTDWFLSWSNPPSY LTTNK
Sbjct: 121 VYRGENLRGVTTDWFLSWSNPPSYQLTTNK 150

[Close]
BLAST of Carg27092 vs. NCBI nr
Match: XP_022968787.1 (23 kDa jasmonate-induced protein-like [Cucurbita maxima])

HSP 1 Score: 305.8 bits (782), Expect = 9.5e-80
Identity = 147/169 (86.98%), Postives = 152/169 (89.94%), Query Frame = 0 

Query: 1   MACNVFGDPITYSSLERMSEYVGKEKRSEDRAYVALQLKNVGAKGKNALEYLEKLNAQWG 60
           MACNVFGDPIT SSLERMSEYVGKEK SEDRAYVALQLKNVGAKGKNALEYLEKLNAQWG
Sbjct: 1   MACNVFGDPITTSSLERMSEYVGKEKGSEDRAYVALQLKNVGAKGKNALEYLEKLNAQWG 60

Query: 61  TEVSTMGLIYNATGNAIKLLKTHDWHGCIGASPYPIRIENGQWGVFLHVDTDSTGSEAAV 120
           TEVSTMGLIYNATGNAIKL+KTHDWHGCIGASP+PIRIENGQWGVFLHVDTDSTGSEAAV
Sbjct: 61  TEVSTMGLIYNATGNAIKLVKTHDWHGCIGASPFPIRIENGQWGVFLHVDTDSTGSEAAV 120

Query: 121 VYRGENLRGVTTDWFLSWSNPPSYHLTTNK-----GVDTGWCVSMDAGN 165
           VYRGENLRGV TDW LSWSNPPSY LTTNK      V   +C +  +GN
Sbjct: 121 VYRGENLRGVPTDWLLSWSNPPSYQLTTNKVFTMLDVRNPFCANHSSGN 169

[Close]
BLAST of Carg27092 vs. NCBI nr
Match: XP_023546464.1 (23 kDa jasmonate-induced protein-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 277.3 bits (708), Expect = 3.6e-71
Identity = 133/150 (88.67%), Postives = 136/150 (90.67%), Query Frame = 0 

Query: 1   MACNVFGDPITYSSLERMSEYVGKEKRSEDRAYVALQLKNVGAKGKNALEYLEKLNAQWG 60
           MACNVFGDPIT          +GKEK SEDRAYVALQLKNVGAK KNALEYLEKLNAQWG
Sbjct: 1   MACNVFGDPIT----------IGKEKGSEDRAYVALQLKNVGAKDKNALEYLEKLNAQWG 60

Query: 61  TEVSTMGLIYNATGNAIKLLKTHDWHGCIGASPYPIRIENGQWGVFLHVDTDSTGSEAAV 120
           TEVSTMGLIYNATGNAIKLLKTHDWHGCIGASP+ IRIENGQWGVFLHVDTDSTGSEAAV
Sbjct: 61  TEVSTMGLIYNATGNAIKLLKTHDWHGCIGASPFLIRIENGQWGVFLHVDTDSTGSEAAV 120

Query: 121 VYRGENLRGVTTDWFLSWSNPPSYHLTTNK 151
           VYRG+NLRGVTTDWFLSWSNPPSY LTTNK
Sbjct: 121 VYRGQNLRGVTTDWFLSWSNPPSYQLTTNK 140

[Close]
BLAST of Carg27092 vs. NCBI nr
Match: AIS71930.1 (23 kDa jasmonate-induced protein [Citrullus lanatus])

HSP 1 Score: 176.8 bits (447), Expect = 6.6e-41
Identity = 86/143 (60.14%), Postives = 99/143 (69.23%), Query Frame = 0 

Query: 1   MACNVFGDPITYSSLERMSEYVGKEKRSEDRAYVALQLKNVGAKGKNALEYLEKLNAQWG 60
           MA NVFG+PIT  +L  M +Y GK+    DRA+VAL +KN   K KNA EY+E+L  QWG
Sbjct: 1   MAYNVFGNPITNETLAAMPDYEGKKITRRDRAHVALNMKNAQDKDKNAREYVERLKQQWG 60

Query: 61  TEVSTMGLIYNATGNAIKLLKTHDWHGCIGASPYPIRIENGQWGVFLHVDTD--STGSEA 120
           T VST+ LIYNATG+ IK +  H WHG IG  PYPI I NGQWG FLHV T   +TGS A
Sbjct: 61  TGVSTLCLIYNATGDTIKFVVEHSWHGHIGPGPYPIEIANGQWGGFLHVKTSGTATGSSA 120

Query: 121 AVVYRGENLRGVTTDWFLSWSNP 142
           A VYRG N  GV  DW L+WSNP
Sbjct: 121 ACVYRGLNNDGVVCDWMLAWSNP 143

[Close]
BLAST of Carg27092 vs. NCBI nr
Match: KGN66612.1 (hypothetical protein Csa_1G642550 [Cucumis sativus])

HSP 1 Score: 170.2 bits (430), Expect = 6.2e-39
Identity = 82/147 (55.78%), Postives = 102/147 (69.39%), Query Frame = 0 

Query: 1   MACNVFGDPITYSSLERMSEYVGKEKRSEDRAYVALQLKNVGAKGKNALEYLEKLNAQWG 60
           MA NVFG+PIT S+L+ M +Y GK     DRAYVAL +KN   K K+A +Y+EKL  +WG
Sbjct: 1   MADNVFGNPITNSTLQAMPDYEGKVITRRDRAYVALNMKNAQGKDKDAQDYVEKLREEWG 60

Query: 61  TEVSTMGLIYNATGNAIKLLKTHDWHGCIGASPYPIRIENGQWGVFLHVDTD--STGSEA 120
           + V+T+ LIYNATG+ IK +  + WHG IG SPYP  IENGQWG FLHV T    +GS A
Sbjct: 61  SGVATLCLIYNATGDTIKFVCEYSWHGHIGPSPYPSEIENGQWGAFLHVKTAVVPSGSAA 120

Query: 121 AVVYRGENLRGVTTDWFLSWSNPPSYH 146
           + VYRG+N  G   DW ++WSNP  YH
Sbjct: 121 SCVYRGQNNNGQLCDWMVAWSNP--YH 145

[Close]
BLAST of Carg27092 vs. Swiss-Prot
Match: sp|P32024|JI23_HORVU (23 kDa jasmonate-induced protein OS=Hordeum vulgare OX=4513 PE=2 SV=1)

HSP 1 Score: 107.1 bits (266), Expect = 2.1e-22
Identity = 58/145 (40.00%), Postives = 82/145 (56.55%), Query Frame = 0 

Query: 1   MACNVFGDPITYSSLERMSEYVGKEK-RSEDRAYVALQLKNVGAKGKNALEYLEKLNAQW 60
           MA  VFG PI+  ++    EY  KE    +D A  A+++ N G K  NA ++++ L  ++
Sbjct: 1   MASGVFGTPISAQTVIATGEY--KEPITQKDVADYAMKMINAGGKDVNAQKFVDNLKERY 60

Query: 61  GTEVSTMGLIYNATGNAIKLLKTHDWHGCIGASPYPIRIENGQWGVFLHVDTD--STGSE 120
           G  ++   L+YNATG  +   K +DWHG I  +PYP  I+NGQWG FLHV     + GS 
Sbjct: 61  GNGIAVKCLLYNATGATLNFAKYNDWHGHIYDTPYPSDIQNGQWGAFLHVHPSGAAAGSA 120

Query: 121 AAVVYRGE-NLRGVTTDWFLSWSNP 142
            AVVYR +      + DW  SW+ P
Sbjct: 121 GAVVYRSKIPSSSSSCDWLFSWTVP 143

[Close]
BLAST of Carg27092 vs. TrEMBL
Match: tr|A0A097BU21|A0A097BU21_CITLA (23 kDa jasmonate-induced protein OS=Citrullus lanatus OX=3654 PE=2 SV=1)

HSP 1 Score: 176.8 bits (447), Expect = 4.4e-41
Identity = 86/143 (60.14%), Postives = 99/143 (69.23%), Query Frame = 0 

Query: 1   MACNVFGDPITYSSLERMSEYVGKEKRSEDRAYVALQLKNVGAKGKNALEYLEKLNAQWG 60
           MA NVFG+PIT  +L  M +Y GK+    DRA+VAL +KN   K KNA EY+E+L  QWG
Sbjct: 1   MAYNVFGNPITNETLAAMPDYEGKKITRRDRAHVALNMKNAQDKDKNAREYVERLKQQWG 60

Query: 61  TEVSTMGLIYNATGNAIKLLKTHDWHGCIGASPYPIRIENGQWGVFLHVDTD--STGSEA 120
           T VST+ LIYNATG+ IK +  H WHG IG  PYPI I NGQWG FLHV T   +TGS A
Sbjct: 61  TGVSTLCLIYNATGDTIKFVVEHSWHGHIGPGPYPIEIANGQWGGFLHVKTSGTATGSSA 120

Query: 121 AVVYRGENLRGVTTDWFLSWSNP 142
           A VYRG N  GV  DW L+WSNP
Sbjct: 121 ACVYRGLNNDGVVCDWMLAWSNP 143

[Close]
BLAST of Carg27092 vs. TrEMBL
Match: tr|A0A0A0M0F4|A0A0A0M0F4_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G642550 PE=4 SV=1)

HSP 1 Score: 170.2 bits (430), Expect = 4.1e-39
Identity = 82/147 (55.78%), Postives = 102/147 (69.39%), Query Frame = 0 

Query: 1   MACNVFGDPITYSSLERMSEYVGKEKRSEDRAYVALQLKNVGAKGKNALEYLEKLNAQWG 60
           MA NVFG+PIT S+L+ M +Y GK     DRAYVAL +KN   K K+A +Y+EKL  +WG
Sbjct: 1   MADNVFGNPITNSTLQAMPDYEGKVITRRDRAYVALNMKNAQGKDKDAQDYVEKLREEWG 60

Query: 61  TEVSTMGLIYNATGNAIKLLKTHDWHGCIGASPYPIRIENGQWGVFLHVDTD--STGSEA 120
           + V+T+ LIYNATG+ IK +  + WHG IG SPYP  IENGQWG FLHV T    +GS A
Sbjct: 61  SGVATLCLIYNATGDTIKFVCEYSWHGHIGPSPYPSEIENGQWGAFLHVKTAVVPSGSAA 120

Query: 121 AVVYRGENLRGVTTDWFLSWSNPPSYH 146
           + VYRG+N  G   DW ++WSNP  YH
Sbjct: 121 SCVYRGQNNNGQLCDWMVAWSNP--YH 145

[Close]
BLAST of Carg27092 vs. TrEMBL
Match: tr|A0A1Q3B2V5|A0A1Q3B2V5_CEPFO (Uncharacterized protein OS=Cephalotus follicularis OX=3775 GN=CFOL_v3_05749 PE=4 SV=1)

HSP 1 Score: 161.0 bits (406), Expect = 2.5e-36
Identity = 75/143 (52.45%), Postives = 97/143 (67.83%), Query Frame = 0 

Query: 1   MACNVFGDPITYSSLERMSEYVGKEKRSEDRAYVALQLKNVGAKGKNALEYLEKLNAQWG 60
           MA NVFG+P+T  +L+ M+EY  KE   +DRA+VAL +KN G K  NA  Y+E LN ++ 
Sbjct: 1   MASNVFGNPVTEETLKSMTEYEKKEITRKDRAHVALDMKNAGQKNVNAQTYVENLNKEYD 60

Query: 61  TEVSTMGLIYNATGNAIKLLKTHDWHGCIGASPYPIRIENGQWGVFLHVDTDSTGSEAAV 120
           + ++T+ ++YNATG+ I+L+  HDW G I  SP P  I NGQWG FLH D    GS AAV
Sbjct: 61  SGITTLCMVYNATGDIIQLVDEHDWTGGIWKSPCPQIIANGQWGAFLHGDIGGNGSSAAV 120

Query: 121 VYRGENLRGVTTDWFLSWSNPPS 144
           VYRG+N  G+  DW LSW NP S
Sbjct: 121 VYRGKNADGLDCDWMLSWYNPSS 143

[Close]
BLAST of Carg27092 vs. TrEMBL
Match: tr|A0A1S3B9I3|A0A1S3B9I3_CUCME (23 kDa jasmonate-induced protein-like OS=Cucumis melo OX=3656 GN=LOC103487248 PE=4 SV=1)

HSP 1 Score: 158.3 bits (399), Expect = 1.6e-35
Identity = 76/143 (53.15%), Postives = 94/143 (65.73%), Query Frame = 0 

Query: 1   MACNVFGDPITYSSLERMSEYVGKEKRSEDRAYVALQLKNVGAKGKNALEYLEKLNAQWG 60
           MA NVFG+PIT S+L+ M EY GK     DRAYVA  +KN   K ++A +++EKL  +WG
Sbjct: 1   MADNVFGNPITNSTLQAMPEYEGKTITRRDRAYVAFNMKNAQNKDRSARDHVEKLREEWG 60

Query: 61  TEVSTMGLIYNATGNAIKLLKTHDWHGCIGASPYPIRIENGQWGVFLHVDTD--STGSEA 120
             V+T+ LIYNATG+ I  +  H WHG IG+ PYP  I NGQWG FLHV T    +GS  
Sbjct: 61  HGVATLCLIYNATGDTITFVCEHSWHGHIGSGPYPSEIANGQWGAFLHVKTAVVPSGSAG 120

Query: 121 AVVYRGENLRGVTTDWFLSWSNP 142
           A VYRG N  G   DW ++WSNP
Sbjct: 121 ACVYRGLNNYGEVCDWMVAWSNP 143

[Close]
BLAST of Carg27092 vs. TrEMBL
Match: tr|A0A2R6RBE7|A0A2R6RBE7_ACTCH (Jasmonate-induced protein OS=Actinidia chinensis var. chinensis OX=1590841 GN=CEY00_Acc09429 PE=4 SV=1)

HSP 1 Score: 152.1 bits (383), Expect = 1.2e-33
Identity = 76/141 (53.90%), Postives = 91/141 (64.54%), Query Frame = 0 

Query: 1   MACNVFGDPITYSSLERMSEYVGKEKRSEDRAYVALQLKNVGAKGKNALEYLEKLNAQWG 60
           MA  VFGDPIT ++LE M EY GK+    DRA+VAL +KN G K   A +Y++ L   WG
Sbjct: 1   MATTVFGDPITNATLELMPEYRGKKITRTDRAHVALNMKNKGDKDAKAHKYVQDLQNNWG 60

Query: 61  TEVSTMGLIYNATGNAIKLLKTHDWHGCIGASPYPIRIENGQWGVFLHVDTDSTGSEAAV 120
              ST  LIYNATG+ + +   HD  G +GA+PYP+ IENGQWG FLHV    TGS  AV
Sbjct: 61  NGDSTQCLIYNATGDRLAITLYHDVQGSLGAAPYPLFIENGQWGAFLHVSWTFTGSIGAV 120

Query: 121 VYRGENLRGVTTDWFLSWSNP 142
           VYRG+N  G   D  LSW NP
Sbjct: 121 VYRGKNESGDEFDCLLSWCNP 141

The following BLAST results are available for this feature:
BLAST of Carg27092 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_022961400.14.5e-8298.0023 kDa jasmonate-induced protein-like [Cucurbita moschata] >XP_022961401.1 23 kD... [more]
XP_022968787.19.5e-8086.9823 kDa jasmonate-induced protein-like [Cucurbita maxima][more]
XP_023546464.13.6e-7188.6723 kDa jasmonate-induced protein-like [Cucurbita pepo subsp. pepo][more]
AIS71930.16.6e-4160.1423 kDa jasmonate-induced protein [Citrullus lanatus][more]
KGN66612.16.2e-3955.78hypothetical protein Csa_1G642550 [Cucumis sativus][more]
BLAST of Carg27092 vs. TAIR10
Match NameE-valueIdentityDescription
BLAST of Carg27092 vs. Swiss-Prot
Match NameE-valueIdentityDescription
sp|P32024|JI23_HORVU2.1e-2240.0023 kDa jasmonate-induced protein OS=Hordeum vulgare OX=4513 PE=2 SV=1[more]
BLAST of Carg27092 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A097BU21|A0A097BU21_CITLA4.4e-4160.1423 kDa jasmonate-induced protein OS=Citrullus lanatus OX=3654 PE=2 SV=1[more]
tr|A0A0A0M0F4|A0A0A0M0F4_CUCSA4.1e-3955.78Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G642550 PE=4 SV=1[more]
tr|A0A1Q3B2V5|A0A1Q3B2V5_CEPFO2.5e-3652.45Uncharacterized protein OS=Cephalotus follicularis OX=3775 GN=CFOL_v3_05749 PE=4... [more]
tr|A0A1S3B9I3|A0A1S3B9I3_CUCME1.6e-3553.1523 kDa jasmonate-induced protein-like OS=Cucumis melo OX=3656 GN=LOC103487248 PE... [more]
tr|A0A2R6RBE7|A0A2R6RBE7_ACTCH1.2e-3353.90Jasmonate-induced protein OS=Actinidia chinensis var. chinensis OX=1590841 GN=CE... [more]
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Carg27092-RACarg27092-RAmRNA


InterPro
Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR36482FAMILY NOT NAMEDcoord: 1..147