Carg27054 (gene) Silver-seed gourd | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Carg27054
Type	gene
Organism	Cucurbita argyrosperma (Silver-seed gourd)
Description	accelerated cell death 11
Location	Cucurbita_argyrosperma_scaffold_205 : 143678 .. 147033 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AACATTCAGAGCACCGACTCAGGCAAACTGCCCGGAGTGAGAGACGGGCACCTTCGTCTTTAGATGGCGGACCTGAACGTCGGCGAGAAGCCGCTGCGAAACATTTCAGAGTCGTTCAAAGCCCTTGCCGCCACTGTAAATGCTGAAACCACCGCGGTCGAGGTTGCGCCGTTTTCTCGCGCCTGCTCCTTTATTTCGCCTCTTTTTGGCTGCTTGGGCATCGCATTCAAATTCGCGGAAATGGACTATGTTGCCAAGGTATTTTAACTAGTTCCTATCTCAATTATCGAGGTGTTTGCCGCTTTTTGATCCAGAGGAACTATGGAAGATGAATTTGTGTAAATTTGATTCTAAAATTTCCAGGCCTGGTTCTTCTTTTACTCTTTAATCTTTGTAGTTTCGCACCTACAGATGATTAGCAGTTTCTTTTCTTCCATTTTGATTGATTAAGGTAAAAGAATGCATGAAAATCTAGAAATTTCTTTGATCTACAAACTTTTATTTGTTGACCTAGCAGATGATTACAATATTATCGAAACTTGTTTGAAATTGACTTGTATTGTATTTAATGAGTGCTCAAATTGAGCATAATTCAATGCACTTAATCGGAGGTAAGAGCTTCATATCCCATACCTTCCTTGTTGCGCCTGTATTCTATTTTTAGTGTAACTGGCTTGGAAGACAAATGGTTGGTATGCTATTTGTTTGTAAGATGAACACGACTCTCCACAATGGTATGATATTGTCCACTTCGAGCATAAGCTCTCATGGCTTTGCTTTGGGCTCCCTCAAAAAGCCTCAACTCAGTGGAGAGAGTATTCATTGGTTATAAACCCATGATCATTCCCTAAATTAGCCGATGTGGGACTTTCATCCAACACCTCCCCTCGAACAAAGTACGCCTCCCCTTAATTGAGGCTCGACTCCTTTTTCTTTGCCTTCGAGGCGGGAGGCTCGACTCCTTTTTCTTTTGGAGTCCTTTGTTCGACATTTGAGGATTCTATTGACAGGGCTAAGGACATGGCTCTGATACCATGTTAAATGAACACGACTCTCCACAATTGTATGATATTGTCCACTTCGAGCATAAGCTCTCATGGCTTTCATTTGGGCTTCCCCAAAAGGTCTCAACCCAATGGAGAGACTATTCCTTGATTATAAACTCATGACCATTCCCTATTTGCCAATGTGGGACTTTGGCGACTCTACTGGGGACAATATCATTCCCTAAAGCAAAGCCATGAAAGCTTATGCTCGAAGTGGACAATATCATACCATTGTGGAGAGTCGTATTCATCTAACACTATTTACCAATTTGTTTCTCCATGTTTGAGGTTTGATTACTCATTGACTCAACTGTGAACAGGTTAATGATCTAGTAGAATCATCTAAGTCAATTGCATCTCTACAAGTGTTGGTGGACAGAGATATTGAATCTGACTGTGTGAGGAAAGCTGGTAGCCATTCAAGAAATCTCTTGAGAGTGAAGCGCGGGATTGACATGGTCAGAGTACTCTTCGAGCAAATTTTAATCACAGAGTATGTATATCAGTCGCTTTAATGTGTTACCCTTTGCTTTAGTCACCTCTCTTTCAATATTTTAATGAACTGTTTGCTTCTATTGAATCTTTCTTGCTCTAATTTTGGCAAGTCCTAAGGCAGTTTGACTAAAAGATGTAGTAGACTCAAGATATTCTCTTTCCATTTGAAGCTAGAGTAAAGCCATCATTCATATCCTATAGAAACCTGATTAGTGATTGCAATTTACAATTAATGCAACATTTCCATTACCTTATCATCATCGTTAAACTAAACCCGATGTAGTTGTTAGGAATCCCGACCCTCCACAATAGTATGATATTGTCTACTTTGAGCATAAGCTCTCATGGTTTTGCTTTTGGGTTTCCCCAAAATGCCTCGTACCAATGGAGATAGTATTCCTTACTTATAAATCCATGATCTTCCTCTTAATTAGCCATTTTGGGATTACTTCTCTCAGTAATCCTCAACCATCCTCCTTTCGAACAAAGTACACCATAGAGCCTCCCATAAGGCCTCCTTCTCTGGAGCTCTCGAATAGCCTCCCCTTAATCGAAGCTCGACTCCTTCTCTGGAGCTCTCAAACAAAATGCACCCTTTGTTCGACACTTGAGTCACCTTTGACTACACCTTCGAGGCTCACAACTTCTTTGTTCGACACTTGAGGATTCTATTGATCGAGCTAAGTTAAGGGCATGACTCTGATACTATGTTAGGAATCCCGACTCACTACAATAGTATGATATTGTCCACTTAGAGCATAAGCTCTCATGGCTTTGCTTTTGGTTTCCCCAAAAGACCTCGTACCAATGGAGATAATATTCTTTACTTATAAACTTATGATCTTCGTCTTAATTTGCCATTGTGGGACTACTTCTTTCAATAATCTTCGTCCATAGTTTTTGCAAACATGTTGAACAATGATTCCTGATTATGGCAGAGGTAATTCCTTGAGAGATCCAGCTTCCAAAGCATATGCACAGGTATTTGCTCCTCACCATGGGTGGGCAATCAGAAAAGCTGTTGGGGCAGGGATGTATGCTCTTCCTTCGAAAGCACAACTGCTGAGGAAGCTCAATGAAGATGGTAAGTAGCATTAGTCAATCGATGAATGTGTATATTGATTAAGATTTCGATCATGATATCAAATGTATGCCTAAATTATTCTAAATACTGAATCCAGTTATTGAATTGATATGCAATTTTTATGACCTGATTTCTTAGTACTCTTGTTTTGATATCATATTTTTCATTCAGAGGCCTCAGCCAGAATCTTCATGCAAGATTATGTGGCCGCTTCTGCTCCTGTGATTCAGTATGTTGAAAAGCTCTTCTTCTCCAGAGATTTGGGCATAGATTGGTAACATATGAACTACAAATCCATAATCTTAATAATTTTGAGCACTCTATATGTAATCTACGAATGATTCATGTCTTTTCCATCTCCCCCAAAATATAAAAAAAATAAGAAATGCACTCAACTAGATATCTTCCCTTTGGTGGCTTTTATTGAACTATAAAATATCCATGAATGCATGAAGTTGTGTATACTCGTCTAATAATTATCTTTGGAAGTGAAATTCTCATAGTGCTTTGTATGTTAATTGGAAGGGAGGGTATGTATAACTCAACTAATTCGGATTACCCAACCCAACGAAGTATAAAGATTAGGTTAGGTTGGGTTGACTGTTTTTTTTTTTTCTCGTTTGATTTGGATTGAATTTTTGAAAAATCGAAAATTTGGTTTAGTTTGCAGGTTGACATTTTTTTTTTGTTGGATCAACCGACAAGCTTGAAAATATGGTTACAATTTAACC

mRNA sequence

AACATTCAGAGCACCGACTCAGGCAAACTGCCCGGAGTGAGAGACGGGCACCTTCGTCTTTAGATGGCGGACCTGAACGTCGGCGAGAAGCCGCTGCGAAACATTTCAGAGTCGTTCAAAGCCCTTGCCGCCACTGTAAATGCTGAAACCACCGCGGTCGAGGTTGCGCCGTTTTCTCGCGCCTGCTCCTTTATTTCGCCTCTTTTTGGCTGCTTGGGCATCGCATTCAAATTCGCGGAAATGGACTATGTTGCCAAGGTATTTGCTCCTCACCATGGGTGGGCAATCAGAAAAGCTGTTGGGGCAGGGATGTATGCTCTTCCTTCGAAAGCACAACTGCTGAGGAAGCTCAATGAAGATGAGGCCTCAGCCAGAATCTTCATGCAAGATTATGTGGCCGCTTCTGCTCCTGTGATTCAGTATGTTGAAAAGCTCTTCTTCTCCAGAGATTTGGGCATAGATTGGTAACATATGAACTACAAATCCATAATCTTAATAATTTTGAGCACTCTATATGTAATCTACGAATGATTCATGTCTTTTCCATCTCCCCCAAAATATAAAAAAAATAAGAAATGCACTCAACTAGATATCTTCCCTTTGGTGGCTTTTATTGAACTATAAAATATCCATGAATGCATGAAGTTGTGTATACTCGTCTAATAATTATCTTTGGAAGTGAAATTCTCATAGTGCTTTGTATGTTAATTGGAAGGGAGGGTATGTATAACTCAACTAATTCGGATTACCCAACCCAACGAAGTATAAAGATTAGGTTAGGTTGGGTTGACTGTTTTTTTTTTTTCTCGTTTGATTTGGATTGAATTTTTGAAAAATCGAAAATTTGGTTTAGTTTGCAGGTTGACATTTTTTTTTTGTTGGATCAACCGACAAGCTTGAAAATATGGTTACAATTTAACC

Coding sequence (CDS)

ATGGCGGACCTGAACGTCGGCGAGAAGCCGCTGCGAAACATTTCAGAGTCGTTCAAAGCCCTTGCCGCCACTGTAAATGCTGAAACCACCGCGGTCGAGGTTGCGCCGTTTTCTCGCGCCTGCTCCTTTATTTCGCCTCTTTTTGGCTGCTTGGGCATCGCATTCAAATTCGCGGAAATGGACTATGTTGCCAAGGTATTTGCTCCTCACCATGGGTGGGCAATCAGAAAAGCTGTTGGGGCAGGGATGTATGCTCTTCCTTCGAAAGCACAACTGCTGAGGAAGCTCAATGAAGATGAGGCCTCAGCCAGAATCTTCATGCAAGATTATGTGGCCGCTTCTGCTCCTGTGATTCAGTATGTTGAAAAGCTCTTCTTCTCCAGAGATTTGGGCATAGATTGGTAA

Protein sequence

MADLNVGEKPLRNISESFKALAATVNAETTAVEVAPFSRACSFISPLFGCLGIAFKFAEMDYVAKVFAPHHGWAIRKAVGAGMYALPSKAQLLRKLNEDEASARIFMQDYVAASAPVIQYVEKLFFSRDLGIDW

Homology

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BLAST of Carg27054 vs. NCBI nr
Match: XP_023536602.1 (accelerated cell death 11 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 235.0 bits (598), Expect = 1.5e-58
Identity = 134/206 (65.05%), Postives = 134/206 (65.05%), Query Frame = 0


Query: 1   MADLNVGEKPLRNISESFKALAATVNAETTAVEVAPFSRACSFISPLFGCLGIAFKFAEM 60
           MADLNVGEKPLRNISESFKALAATVNAETTAVEVAPFSRACSFISPLFGCLGIAFKFAEM
Sbjct: 1   MADLNVGEKPLRNISESFKALAATVNAETTAVEVAPFSRACSFISPLFGCLGIAFKFAEM 60

Query: 61  DYVAK------------------------------------------------------- 120
           DYVAK                                                       
Sbjct: 61  DYVAKVNDLVESSKSIASLQVLVDKDIESDCVRKAGSHSRNLLRVKRGIDMVRVLFEQIL 120

Query: 121 -----------------VFAPHHGWAIRKAVGAGMYALPSKAQLLRKLNEDEASARIFMQ 135
                            VFAPHHGWAIRKAVGAGMYALPSKAQLLRKLNEDEASARIFMQ
Sbjct: 121 ITEGNSLRDPASKAYAQVFAPHHGWAIRKAVGAGMYALPSKAQLLRKLNEDEASARIFMQ 180

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BLAST of Carg27054 vs. NCBI nr
Match: XP_022974080.1 (accelerated cell death 11 [Cucurbita maxima])

HSP 1 Score: 233.8 bits (595), Expect = 3.4e-58
Identity = 133/206 (64.56%), Postives = 134/206 (65.05%), Query Frame = 0


Query: 1   MADLNVGEKPLRNISESFKALAATVNAETTAVEVAPFSRACSFISPLFGCLGIAFKFAEM 60
           MADLNVGEKPLRNISESFKALAATVNAETTAVEVAPFSRACSFISPLFGCLGIAFKFAEM
Sbjct: 1   MADLNVGEKPLRNISESFKALAATVNAETTAVEVAPFSRACSFISPLFGCLGIAFKFAEM 60

Query: 61  DYVAK------------------------------------------------------- 120
           DYVAK                                                       
Sbjct: 61  DYVAKVNDLVESSKSIASLQVLVDKDIESECVRKAGSHSRNLLRVKRGVDMVRVLFEQIL 120

Query: 121 -----------------VFAPHHGWAIRKAVGAGMYALPSKAQLLRKLNEDEASARIFMQ 135
                            VFAPHHGWAIRKAVGAGMYALPSKAQLL+KLNEDEASARIFMQ
Sbjct: 121 ITEGNSLRDPASKAYAQVFAPHHGWAIRKAVGAGMYALPSKAQLLKKLNEDEASARIFMQ 180

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BLAST of Carg27054 vs. NCBI nr
Match: XP_022930192.1 (accelerated cell death 11 [Cucurbita moschata])

HSP 1 Score: 232.6 bits (592), Expect = 7.6e-58
Identity = 133/206 (64.56%), Postives = 133/206 (64.56%), Query Frame = 0


Query: 1   MADLNVGEKPLRNISESFKALAATVNAETTAVEVAPFSRACSFISPLFGCLGIAFKFAEM 60
           MADLNVGEKPLRNISESFKALAATVNAET AVEVAPFSRACSFISPLFGCLGIAFKFAEM
Sbjct: 1   MADLNVGEKPLRNISESFKALAATVNAETIAVEVAPFSRACSFISPLFGCLGIAFKFAEM 60

Query: 61  DYVAK------------------------------------------------------- 120
           DYVAK                                                       
Sbjct: 61  DYVAKVNDLVESSKSIASLQVLVDRDIESDCVRKAGSHSRNLLRVKRGIDMVRVLFEQIL 120

Query: 121 -----------------VFAPHHGWAIRKAVGAGMYALPSKAQLLRKLNEDEASARIFMQ 135
                            VFAPHHGWAIRKAVGAGMYALPSKAQLLRKLNEDEASARIFMQ
Sbjct: 121 ITEGNSLRDPASKAYAQVFAPHHGWAIRKAVGAGMYALPSKAQLLRKLNEDEASARIFMQ 180

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BLAST of Carg27054 vs. NCBI nr
Match: XP_008458024.1 (PREDICTED: accelerated cell death 11 [Cucumis melo] >XP_008458025.1 PREDICTED: accelerated cell death 11 [Cucumis melo])

HSP 1 Score: 211.1 bits (536), Expect = 2.4e-51
Identity = 124/206 (60.19%), Postives = 126/206 (61.17%), Query Frame = 0


Query: 1   MADLNVGEKPLRNISESFKALAATVNAETTAVEVAPFSRACSFISPLFGCLGIAFKFAEM 60
           M DL V  KPLRNISESFKALAATVNAE T VEVAPFSRACSFISPLFGCLGIAFKFAEM
Sbjct: 1   MGDLVV--KPLRNISESFKALAATVNAENTTVEVAPFSRACSFISPLFGCLGIAFKFAEM 60

Query: 61  DYVAK------------------------------------------------------- 120
           DYVAK                                                       
Sbjct: 61  DYVAKVNDLVESSKSIVSLQALLDKDIESDCVRKAGSHSRNLLRVKRGLDMVRVLFEQIL 120

Query: 121 -----------------VFAPHHGWAIRKAVGAGMYALPSKAQLLRKLNEDEASARIFMQ 135
                            VFAPHHGWAIRKAVGAGMYALP+KAQLL KLNEDEASARI MQ
Sbjct: 121 VTEGNSLRDPASKAYAQVFAPHHGWAIRKAVGAGMYALPTKAQLLSKLNEDEASARILMQ 180

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BLAST of Carg27054 vs. NCBI nr
Match: XP_022139848.1 (accelerated cell death 11 [Momordica charantia])

HSP 1 Score: 205.3 bits (521), Expect = 1.3e-49
Identity = 121/206 (58.74%), Postives = 123/206 (59.71%), Query Frame = 0


Query: 1   MADLNVGEKPLRNISESFKALAATVNAETTAVEVAPFSRACSFISPLFGCLGIAFKFAEM 60
           MADL+ GEKPLR ISESFK LAATVNA TT VEV PFSRACSFISPLFGCLGIAFKFAEM
Sbjct: 1   MADLD-GEKPLRKISESFKELAATVNAGTTEVEVTPFSRACSFISPLFGCLGIAFKFAEM 60

Query: 61  DYVAK------------------------------------------------------- 120
           DYVAK                                                       
Sbjct: 61  DYVAKVRDLAESSKSIVSLQALLDKDMESDCVRKAGSHTRNLLRVKRGLDMVRVLFEQIL 120

Query: 121 -----------------VFAPHHGWAIRKAVGAGMYALPSKAQLLRKLNEDEASARIFMQ 135
                            VFAPHHGWAIRKAV AGMYALP+KAQLL KLNEDE SAR  MQ
Sbjct: 121 VTEGNSLKDPASKAYAQVFAPHHGWAIRKAVAAGMYALPTKAQLLNKLNEDETSARTLMQ 180

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BLAST of Carg27054 vs. TAIR10
Match: AT2G34690.1 (Glycolipid transfer protein (GLTP) family protein)

HSP 1 Score: 148.3 bits (373), Expect = 3.4e-36
Identity = 90/207 (43.48%), Postives = 104/207 (50.24%), Query Frame = 0


Query: 1   MADLNVGEKPLRNISESFKALAATVNAETTAVEVAPFSRACSFISPLFGCLGIAFKFAEM 60
           MAD +  +KPLR IS +FK LA  VN+    V V  FS ACS +SPLFGCLGIAFKFAEM
Sbjct: 1   MAD-SEADKPLRKISAAFKKLAIIVNSPNPEVPVTQFSHACSLVSPLFGCLGIAFKFAEM 60

Query: 61  DYVAK------------------------------------------------------- 120
           DYVAK                                                       
Sbjct: 61  DYVAKVDDLVRASSSISTLVVMMDKDIEADCVRKAGSHTRNLLRVKRGLDMVKVLFEQII 120

Query: 121 ------------------VFAPHHGWAIRKAVGAGMYALPSKAQLLRKLNEDEASARIFM 135
                             VFAPHHGWAIRKAV  GMYALP++A LL  L EDEA+A+I M
Sbjct: 121 ASEGDNSLKDPATKSYAQVFAPHHGWAIRKAVSLGMYALPTRAHLLNMLKEDEAAAKIHM 180

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BLAST of Carg27054 vs. TAIR10
Match: AT4G39670.1 (Glycolipid transfer protein (GLTP) family protein)

HSP 1 Score: 90.5 bits (223), Expect = 8.5e-19
Identity = 61/203 (30.05%), Postives = 87/203 (42.86%), Query Frame = 0


Query: 10  PLRNISESFKALAATVNAETT------AVEVAPFSRACSFISPLFGCLGIAFKFAEMDYV 69
           PL  I+E+F+ LA  V  + +       + +  F  AC+ +S LF CLG AFKFAEM+Y+
Sbjct: 27  PLSVITEAFEDLADLVKPQRSDEIDEDELRLDDFCSACTHVSVLFNCLGFAFKFAEMEYI 86

Query: 70  AK---------------------------------------------------------- 129
           AK                                                          
Sbjct: 87  AKVKDLVEASKTFETLHNILDLDVEKETVKTPGSHSRNLRRVRQGLDLIRAIFEQFLIAD 146

Query: 130 --------------VFAPHHGWAIRKAVGAGMYALPSKAQLLRKLNEDEASARIFMQDYV 135
                         V AP H WA+R AV AGMY LP++ QLL +LNE + S    M+ Y+
Sbjct: 147 DYSLKDAATTAYTEVCAPFHTWAVRTAVYAGMYTLPTRDQLLLRLNETDQSVEKNMRRYM 206

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BLAST of Carg27054 vs. Swiss-Prot
Match: sp|O64587|ACD11_ARATH (Accelerated cell death 11 OS=Arabidopsis thaliana OX=3702 GN=ACD11 PE=1 SV=1)

HSP 1 Score: 148.3 bits (373), Expect = 6.2e-35
Identity = 90/207 (43.48%), Postives = 104/207 (50.24%), Query Frame = 0


Query: 1   MADLNVGEKPLRNISESFKALAATVNAETTAVEVAPFSRACSFISPLFGCLGIAFKFAEM 60
           MAD +  +KPLR IS +FK LA  VN+    V V  FS ACS +SPLFGCLGIAFKFAEM
Sbjct: 1   MAD-SEADKPLRKISAAFKKLAIIVNSPNPEVPVTQFSHACSLVSPLFGCLGIAFKFAEM 60

Query: 61  DYVAK------------------------------------------------------- 120
           DYVAK                                                       
Sbjct: 61  DYVAKVDDLVRASSSISTLVVMMDKDIEADCVRKAGSHTRNLLRVKRGLDMVKVLFEQII 120

Query: 121 ------------------VFAPHHGWAIRKAVGAGMYALPSKAQLLRKLNEDEASARIFM 135
                             VFAPHHGWAIRKAV  GMYALP++A LL  L EDEA+A+I M
Sbjct: 121 ASEGDNSLKDPATKSYAQVFAPHHGWAIRKAVSLGMYALPTRAHLLNMLKEDEAAAKIHM 180

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BLAST of Carg27054 vs. Swiss-Prot
Match: sp|Q8L7U7|ACDH_ARATH (ACD11 homolog protein OS=Arabidopsis thaliana OX=3702 GN=At4g39670 PE=2 SV=1)

HSP 1 Score: 90.5 bits (223), Expect = 1.5e-17
Identity = 61/203 (30.05%), Postives = 87/203 (42.86%), Query Frame = 0


Query: 10  PLRNISESFKALAATVNAETT------AVEVAPFSRACSFISPLFGCLGIAFKFAEMDYV 69
           PL  I+E+F+ LA  V  + +       + +  F  AC+ +S LF CLG AFKFAEM+Y+
Sbjct: 27  PLSVITEAFEDLADLVKPQRSDEIDEDELRLDDFCSACTHVSVLFNCLGFAFKFAEMEYI 86

Query: 70  AK---------------------------------------------------------- 129
           AK                                                          
Sbjct: 87  AKVKDLVEASKTFETLHNILDLDVEKETVKTPGSHSRNLRRVRQGLDLIRAIFEQFLIAD 146

Query: 130 --------------VFAPHHGWAIRKAVGAGMYALPSKAQLLRKLNEDEASARIFMQDYV 135
                         V AP H WA+R AV AGMY LP++ QLL +LNE + S    M+ Y+
Sbjct: 147 DYSLKDAATTAYTEVCAPFHTWAVRTAVYAGMYTLPTRDQLLLRLNETDQSVEKNMRRYM 206

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BLAST of Carg27054 vs. TrEMBL
Match: tr|A0A1S3C6E5|A0A1S3C6E5_CUCME (accelerated cell death 11 OS=Cucumis melo OX=3656 GN=LOC103497566 PE=4 SV=1)

HSP 1 Score: 211.1 bits (536), Expect = 1.6e-51
Identity = 124/206 (60.19%), Postives = 126/206 (61.17%), Query Frame = 0


Query: 1   MADLNVGEKPLRNISESFKALAATVNAETTAVEVAPFSRACSFISPLFGCLGIAFKFAEM 60
           M DL V  KPLRNISESFKALAATVNAE T VEVAPFSRACSFISPLFGCLGIAFKFAEM
Sbjct: 1   MGDLVV--KPLRNISESFKALAATVNAENTTVEVAPFSRACSFISPLFGCLGIAFKFAEM 60

Query: 61  DYVAK------------------------------------------------------- 120
           DYVAK                                                       
Sbjct: 61  DYVAKVNDLVESSKSIVSLQALLDKDIESDCVRKAGSHSRNLLRVKRGLDMVRVLFEQIL 120

Query: 121 -----------------VFAPHHGWAIRKAVGAGMYALPSKAQLLRKLNEDEASARIFMQ 135
                            VFAPHHGWAIRKAVGAGMYALP+KAQLL KLNEDEASARI MQ
Sbjct: 121 VTEGNSLRDPASKAYAQVFAPHHGWAIRKAVGAGMYALPTKAQLLSKLNEDEASARILMQ 180

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BLAST of Carg27054 vs. TrEMBL
Match: tr|A0A0A0K8C3|A0A0A0K8C3_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G341220 PE=4 SV=1)

HSP 1 Score: 203.8 bits (517), Expect = 2.5e-49
Identity = 116/202 (57.43%), Postives = 122/202 (60.40%), Query Frame = 0


Query: 5   NVGEKPLRNISESFKALAATVNAETTAVEVAPFSRACSFISPLFGCLGIAFKFAEMDYVA 64
           ++GEKPL+NISESFKALAA +N+  T VEVAPFSRACSFISPLFGCLGIAFKFAEMDYVA
Sbjct: 3   DLGEKPLQNISESFKALAANINSGNTTVEVAPFSRACSFISPLFGCLGIAFKFAEMDYVA 62

Query: 65  K----------------------------------------------------------- 124
           K                                                           
Sbjct: 63  KVNDLVESSKSIVSLQALLDKDIESDCVRKAGSHSRNLLRVKRGLDMVRVLFEQILLTEG 122

Query: 125 -------------VFAPHHGWAIRKAVGAGMYALPSKAQLLRKLNEDEASARIFMQDYVA 135
                        VFAPHHGWAIRKAVGAGMYALP+K QLL KL EDEASARI MQDYVA
Sbjct: 123 NSLRDPASKAYAQVFAPHHGWAIRKAVGAGMYALPTKGQLLSKLKEDEASARILMQDYVA 182

[Close]

BLAST of Carg27054 vs. TrEMBL
Match: tr|A0A200PSJ4|A0A200PSJ4_9MAGN (Glycolipid transfer protein domain OS=Macleaya cordata OX=56857 GN=BVC80_7733g1 PE=4 SV=1)

HSP 1 Score: 183.0 bits (463), Expect = 4.6e-43
Identity = 106/198 (53.54%), Postives = 115/198 (58.08%), Query Frame = 0


Query: 9   KPLRNISESFKALAATVNAETTAVEVAPFSRACSFISPLFGCLGIAFKFAEMDYVAK--- 68
           KPLR ISE+F+ LAATVN++T  VEVAPFS ACS +SPLFGCLGIAFKFAEMDYVAK   
Sbjct: 6   KPLRKISEAFEDLAATVNSQTLDVEVAPFSHACSLVSPLFGCLGIAFKFAEMDYVAKVVD 65

Query: 69  ------------------------------------------------------------ 128
                                                                       
Sbjct: 66  LSEASKSILTLQSMLELDIVHNTVRIAGSHSRNLLRVKRGIDMVRILFEQILATEGNSLK 125

Query: 129 ---------VFAPHHGWAIRKAVGAGMYALPSKAQLLRKLNEDEASARIFMQDYVAASAP 135
                    VFAPHHGWAIRKAV AGMYALP+KAQLL+KLNEDEASARI MQ+YVAASAP
Sbjct: 126 DPASKAYAQVFAPHHGWAIRKAVAAGMYALPTKAQLLKKLNEDEASARIQMQNYVAASAP 185

[Close]

BLAST of Carg27054 vs. TrEMBL
Match: tr|A0A2I4F8X6|A0A2I4F8X6_9ROSI (accelerated cell death 11-like isoform X1 OS=Juglans regia OX=51240 GN=LOC108996579 PE=4 SV=1)

HSP 1 Score: 182.6 bits (462), Expect = 6.0e-43
Identity = 106/206 (51.46%), Postives = 120/206 (58.25%), Query Frame = 0


Query: 1   MADLNVGEKPLRNISESFKALAATVNAETTAVEVAPFSRACSFISPLFGCLGIAFKFAEM 60
           MADL+   KPLR+ISE+FK LAATVNA+T  VEVAPFSRACS ISPLFGCLGIAFKFAE+
Sbjct: 1   MADLD-DNKPLRDISEAFKELAATVNAQTADVEVAPFSRACSLISPLFGCLGIAFKFAEI 60

Query: 61  DYVAK------------------------------------------------------- 120
           DYVAK                                                       
Sbjct: 61  DYVAKVKDLAEASKSIGSLQALLEQDIAANTIKKAGSHSRNLLRVKRGLDMVRILFEQML 120

Query: 121 -----------------VFAPHHGWAIRKAVGAGMYALPSKAQLLRKLNEDEASARIFMQ 135
                            VFAPHHGWAIRKAV AGMYALP+KAQLLRKLNE+EASARI MQ
Sbjct: 121 ATEGNSLKDPASKAYAQVFAPHHGWAIRKAVAAGMYALPTKAQLLRKLNEEEASARIEMQ 180

[Close]

BLAST of Carg27054 vs. TrEMBL
Match: tr|A0A1U7YTW2|A0A1U7YTW2_NELNU (accelerated cell death 11 isoform X2 OS=Nelumbo nucifera OX=4432 GN=LOC104585863 PE=4 SV=1)

HSP 1 Score: 181.4 bits (459), Expect = 1.3e-42
Identity = 106/206 (51.46%), Postives = 119/206 (57.77%), Query Frame = 0


Query: 1   MADLNVGEKPLRNISESFKALAATVNAETTAVEVAPFSRACSFISPLFGCLGIAFKFAEM 60
           MAD   GEKPLR I+E+FK L+ TVN++T  VEVAPFS ACS +SPLFGCLGIAFKFAEM
Sbjct: 1   MAD---GEKPLRKIAEAFKDLSVTVNSQTQDVEVAPFSHACSLVSPLFGCLGIAFKFAEM 60

Query: 61  DYVAK------------------------------------------------------- 120
           DYVAK                                                       
Sbjct: 61  DYVAKVVDLTEASKSIDTLRTMLDRDIQHNCVRKAGSHSRNLLRVKRGLDMVRVLFEQIL 120

Query: 121 -----------------VFAPHHGWAIRKAVGAGMYALPSKAQLLRKLNEDEASARIFMQ 135
                            VFAPHHGWAIRKAV AGMYALP++AQLLRKLNEDEAS+RI MQ
Sbjct: 121 ATEGNSLKGPASKAYDQVFAPHHGWAIRKAVAAGMYALPTRAQLLRKLNEDEASSRIQMQ 180

The following BLAST results are available for this feature:

BLAST of Carg27054 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_023536602.1	1.5e-58	65.05	accelerated cell death 11 [Cucurbita pepo subsp. pepo]	[more]
XP_022974080.1	3.4e-58	64.56	accelerated cell death 11 [Cucurbita maxima]	[more]
XP_022930192.1	7.6e-58	64.56	accelerated cell death 11 [Cucurbita moschata]	[more]
XP_008458024.1	2.4e-51	60.19	PREDICTED: accelerated cell death 11 [Cucumis melo] >XP_008458025.1 PREDICTED: a...	[more]
XP_022139848.1	1.3e-49	58.74	accelerated cell death 11 [Momordica charantia]	[more]

BLAST of Carg27054 vs. TAIR10


Match Name	E-value	Identity	Description
AT2G34690.1	3.4e-36	43.48	Glycolipid transfer protein (GLTP) family protein	[more]
AT4G39670.1	8.5e-19	30.05	Glycolipid transfer protein (GLTP) family protein	[more]

BLAST of Carg27054 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|O64587\|ACD11_ARATH	6.2e-35	43.48	Accelerated cell death 11 OS=Arabidopsis thaliana OX=3702 GN=ACD11 PE=1 SV=1	[more]
sp\|Q8L7U7\|ACDH_ARATH	1.5e-17	30.05	ACD11 homolog protein OS=Arabidopsis thaliana OX=3702 GN=At4g39670 PE=2 SV=1	[more]

BLAST of Carg27054 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A1S3C6E5\|A0A1S3C6E5_CUCME	1.6e-51	60.19	accelerated cell death 11 OS=Cucumis melo OX=3656 GN=LOC103497566 PE=4 SV=1	[more]
tr\|A0A0A0K8C3\|A0A0A0K8C3_CUCSA	2.5e-49	57.43	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G341220 PE=4 SV=1	[more]
tr\|A0A200PSJ4\|A0A200PSJ4_9MAGN	4.6e-43	53.54	Glycolipid transfer protein domain OS=Macleaya cordata OX=56857 GN=BVC80_7733g1 ...	[more]
tr\|A0A2I4F8X6\|A0A2I4F8X6_9ROSI	6.0e-43	51.46	accelerated cell death 11-like isoform X1 OS=Juglans regia OX=51240 GN=LOC108996...	[more]
tr\|A0A1U7YTW2\|A0A1U7YTW2_NELNU	1.3e-42	51.46	accelerated cell death 11 isoform X2 OS=Nelumbo nucifera OX=4432 GN=LOC104585863...	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Cellular Component**
Term	Definition
GO:0005737	cytoplasm

Vocabulary: **INTERPRO**
Term	Definition
IPR014830	Glycolipid_transfer_prot_dom
IPR036497	GLTP_sf

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005737	cytoplasm
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg27054-RA	Carg27054-RA	mRNA

InterPro

Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR036497	Glycolipid transfer protein superfamily	GENE3D	G3DSA:1.10.3520.10		coord: 2..65 e-value: 1.3E-16 score: 62.5 coord: 66..134 e-value: 1.9E-25 score: 91.4
IPR036497	Glycolipid transfer protein superfamily	SUPERFAMILY	SSF110004	Glycolipid transfer protein, GLTP	coord: 27..133
IPR014830	Glycolipid transfer protein domain	PFAM	PF08718	GLTP	coord: 65..97 e-value: 1.0E-7 score: 32.2
None	No IPR available	PANTHER	PTHR10219	GLYCOLIPID TRANSFER PROTEIN-RELATED	coord: 64..131 coord: 6..66
None	No IPR available	PANTHER	PTHR10219:SF28	ACD11 HOMOLOG PROTEIN	coord: 64..131 coord: 6..66

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Carg27054	CmaCh09G011980	Cucurbita maxima (Rimu)	carcmaB0036
Carg27054	CmoCh09G012110	Cucurbita moschata (Rifu)	carcmoB0036
Carg27054	Cp4.1LG06g09710	Cucurbita pepo (Zucchini)	carcpeB0039

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:

None