Carg27052 (gene) Silver-seed gourd | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Carg27052
Type	gene
Organism	Cucurbita argyrosperma (Silver-seed gourd)
Description	Glycerophosphodiester phosphodiesterase
Location	Cucurbita_argyrosperma_scaffold_205 : 112674 .. 121653 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexonthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AAGTTGCGATCCGAATGGTGCTCTCCGGCTCTAGATTTGGAAGGAGGCGTTGGATTGGGCAAAGAACATGGCGCAATCGATTCCCCTTCAGAATCTCTTCCCGACGAATCTTTCATCTCACAATCCTATGCCTCGCTTTTGATCGCAATTCTGCCTCCCATTTTCTTCCATTTCAAGCTCAAGCGCTTTCAGCAGGTAATCTTTCTCCTAATCTGATCTCTACTCTGTAATTCAATTCCAAAATCGCATGATTGTGTTTGTTCTCTGTATAGATGCAACAAGGGAAGTGCAAATGGATGAATGATCCTCCACTTGTGTGTGCTCATGGAGGCGACTCATCCAAGGCCTTTCCGAACACTGTACGATTCCTCTATTCGCTTTAGGTACCGAATCATCTCTGATCGATCTTTATTGGTTATGATCTTCTCCACTACTTCCTACAGATGGATGCATATAGCTTAGCGCTTCGTTCTCAAGCCAACTGCATTGAAGTTGATGTTTCTCGCTCTTCAGATGGAGTCTTATTTGCACTTCATGACAGGTATGTAAAACAAGTTTGTACAACACATGTATGTGCACAGGCAACAACCATCACCGTTTCCAATTGTATCTAAATCAGTTAAGAAGGCTAGGTCATGTCAATTTTCTTCTCCTGCAATGTAATCAAGATTAAATAATCAAGATGATTCTTATATTAGGTTGTGGTCGAGGTGTACTTCAGTGTTGAAATATTCAGTGGACTTGGTGATATGGACTGGGATTGTTATGGAACCAGCGGTCTTTAGATATTAAATGGCTAAATATATTTTACTCTGTTCTTTTATTCTCATATTACGAAACTTTTGATGATATTTGGAGGCTTGATTATCACCTGATAGGCAGGGACTTGCAGAGGATAACTGGATCAAATACTTCTCAAGTTGGAAATTTTAGCATGAAAGAGGTGAGTTTAGATTCTGCATCTTGATATCTGTATTAAACAACTCTCTAATTGAGGTGCATAGGGAGTTTGCTTTATTATGAATTTTCCCCAGTTCATGTATATAAATATATATACCAACACCCATTATAGACTTCTGCAAATAAGACTCTGTAGTCTCCATTGAATTGCTTCTTGGGTTAGCAGATATCAGTCGCTGTTAGGGAGGATTGGATGAGAGGGGAATTAGGTTGATTCATTAAATGATTTTATTATGTAATAAAGGCTTGTTGTGTTCTATCTCAGAGAGAAGTGAGTCTTGATTAAAAGTTCTTCTTTCTTTATGTTCCATCACAGAGCAATTTTACAGTGTTGGTTGAGCTGATTGCTCAAATTTAGTGCCTAAAGTGTACTTAGCTTTGTGTAGACGGGACTTGATTATTTAGATTTATCTAGATTAGCGTCATTTTCTTTTCCTACCATGTTGTACCGTTTGGACCCCAAAATTCCTGGGCTTTCTAATGTGTGCTTACATTTTCAATTAAGAACCAATAACCACTTGTTAATGTTTCGAGGATATCGTTTTCCATTTAGTGTAATACTAAATCCTTAGGCACTACATTGATTACTGATGCCATTTCGTTCAGAAGAGGTTTATTTGTGCTTATCACACTAAATGCTTTTCTTTTTATTATGTATACAAAAAAACGAAAATTGTTTCTATTTTATAAATGACTTATTAGAAACAAAATTGAAAGGTTGAGGACTAAGTAGATATTTTTTAATAGAAGAACTTATTAGACGCAAGATTTAAAGTTTAAGGACCTATTACACGGTTTTTAAAGTTCAAGATCCTATTAGACACAAACCTCAAAGTTCAAGGACTAAACTTGTAATTAAATCCAAATATAAATATAGTAATACATGATTACATAGAATGATATTTATTTTATTTTACATTCTTGAGTTTGTATTCAATAAATTTTCTTTTTCTTCAATGTCCATTTTTTCTTTCAAGAAATAGCAGAGAACAAAATTTCTGGTTAAAAGTAATAAAACAATGTGAATGATTGCCTTATCCTCACTGACTCACAAAAGGTGTCAAAGAGCAACTAAAAGTCAACTAAGGCAATTGCATGAGTGTAGGGGCTCTCCAGTCTCCATCGACAATCATATGGTTGCCTTTTGTCATGCTAGTTATAGTTATATTGGTTGCAATTAGTTATAGGCTTGTAATGGTTACTTGGATAAATTGTAAAAGAATAGTAGGGAAAATTGAGTCGATTATTGGAAGGGGTCTCTCTAACAATAGCCTGGTTTTGCACTACGCTAATAATAGCTTGTCAAGATTACGTAATAGCCTCGCTTCACTATGCTAATAACAACTCATCATGCTTCACTATGCTAATAACAACTCATCAACATTACTTATGCGTAAAAAGGCAGGAATTTTTTCCTCTTGGAGCTATGGGATTCAATACATTGGCTGTAAACCTGTTACTTTCTAACGTAATCCCTACTTCATCATCTTGTTTCCTGGCCCCTGGGAGTCTGGGTACCCAGTAGAAACAAGGTGGCAGTCAGACTTAGTCTTTATCTCTGGGGTGGCATTCTCTTTTGCATCTTTTTGCATGCCACAGAATCTGTTTCTCATTTCTGCTACACTGCCATAGAGACAACTCTTATGAGATGCTCGACAGACTCCGTGTTCCTGTTTCTGGCAAACCATACAAGCAATAAGTCGCAATGGTGTTGATTAATGCCTGTTAGAGATATTTTGTAAGAGATTTGTCCAGAAAAGAGCATTTCCCTAGAGGCTACTAAAAAGGATATATAGGAGCTTAATTTATTTCTATTTCTTCCTCTAGGAGCTCTCTATCATGATTTTTCTGATTATAGTCTTTCTTGATTTTTCCTCAATGGGAGAGGGCTGACTCCTTTGACTTGTTTGTTAATGGCTCCTTTATAATTTATTCTTCTATGAAATATTTTTTTATCCTCAATTTCTGTATATGGATATATTTTTTTTTTTTTCTCTTTGTAACATTATTCTGTAGTTTGCGGTTATAGATAAAAAATCTTGGAGCTTTTTATCAACACACTAATAAATTGCTGGATTTCAACATTCCTACAATTGAAGAAGCATTAGTGGTAAGCTTTAGTATATATGCTCTCTTAGAATGAATTCATTATATACCATTTAATGCCTATCTGATCCTGCTTGCCAAAATCCAGTTTGATATTTCTTAGTTTATTCTTTGGAAGACTCGGCATTTTCAGTTGACTATCATTCCCTTGTATTTGTGCAGTTAATATCAAAATCAGTTAAGCAGGTGATTCTAGATGCAAAGATAGGACCACCGTCATATGAAAATGGGCTTGCAAAGGACATCATTTCTGTTGTGAGTTTTCTCTTCTTTCTCCTTTGTCTGCACAATTTTCTACTAACGAAGACATTATCTAAACATGTTAATCTAAGTTCTTATTTTTTGGAGTATTTGTAAAATATAAGGTTGTTCTAGTTGTGGCTGTGTTCTAGAATAGTACTAGCAATTTTAGGATTAACCGTACAGCTGACAGTTGCAATATTTTGCCTTCATCTTTGTATTATCTTACTTTTAAACCCGTGATCTTTACCATCTCTCCCTCCGGAACTGAAGAAAGCATAGTGTTTGTTGATACTATTATATATTAGTCGAAGGAATTATGGGTGTACTCGAGGGGGAAGCTTTCAGTTTATGTTGGAACTGGGGTTGTAGCTTGGATGAGAGATGGGATGATAGTGCCTGTGGCATTAGTGAGGCACTGAACTTCCACTCGAAGAGGAGACTAGTTTATGTGTTAAGCCTATTCATGTTTCATCAACACTGGAGAGGTGTTTTGTATGGTTTATGTGGGCCATTTCAAGGCAGTTTCATTCTTGCTAGCAGAAATGGTGAGTGGTGGAGAGGTGTTTTGTATGGTTAGGCACTGGAGAGGTGTTTTGTATGGTTTTTTTTCTCTCCCAAGTTGTAATTAATGAGGATGTGCTAGAAAAGTAGCCTACATCATCCCTAGTGTGATGTGCACATTCCGACCGGTAATAAATGAGTGGGGAGGCTCCAAGTATCTCAAATACTTAGAGAATTGCATTGTAATTCTGTTATGTTTTATGTTTCAATCTATTTGGGTTCTACTACATTTGTTCACACAATTATAAGCTAAGGAGAGAGGGCAAAAGGATAGAGATTGAAATGGAGAGTGATGTTAGGGAAGTAGCATTTAAAATAATAATAAAATGTCAAGAAGGAAGACGAGTTGATCTAAAGGGCACCCCTTACAGCTGCATGTCTCCGCACGCTCCCACTATCAATAGTGGTCTACACTCCATCTAAAAAAAATAGAGTAACATGGAATGAGTATAAAAATACTCAGTAAACAAAGTAATTGTAGGCTTTTGTCGAACTTAATCCTTTACAAGGAAACTTAGGCTATGTGTCATAACTATCCCTAGCGATAGCCAAACTATGGCTTAACATCTGTATCAAACTGTGTAGGTCATTGTGTAACTAATCCTTAGCATACCTTGTTTAAGGAGTACTCAATCTCTCTTAGGTTCACAACCTAGAGGTTTTCTATTTTCTCCTTGGCTCTAGGTTTCACATATGTCTAGGTCCTTCGTTAGTCTTGCGCAAAGTGTGCCTTGAATCGCTGCGGCCCATGGAAAGGCTCAAGGGTAATACTCATAAGTCTAGAGGAGCCTTTTTGCTTTAAGATGATGATTGTACTCCATGCATGTCTACCTACTGAGCTCTAATTGGTGGGTGACCCTAGCGGTGTCAGGCAACATCTACATGTTCCTAAGATCAGTAAACTACCGGTCACTATGCCTTTTCAGACTGGAACAGTAAACTGCATGCTTATGTACCTTCCTCGGGTTAGAACAGTAAAACTACCTGTCTTAGGAAGAATAACTTCTTGTTACTTCACTTTTTTAGGGTAGAACAGTAAACTACCTGTCAATACACCACTCGGGCTAGATCGTAAAAAAGGCCATGGCTCTCCCCATTAGGCACCACCGTTAAAACTTCAATAGTAAACTCTCTATGACTCCTGAAAACCCTCTATGAGTGACAACTAAGCCATGTGTAACAAGTAGGTCATAACTCCTGCGGGTTAGTTCATGCATAGAGACGTCAAATCCTGGTGCATCCCTAATGGAAGATGATAGTATAGATGGATAAAAAAGGAGGAAACAAACAAGTGTGGCCATCAAATTTGACTTGGAAAAAAGCCTTCAACAAGGTCAATTGGACTTCCTAGAAAAACATTTTTGTAGCCAAAGACTTTGGCTCAAAATGGCGAGTGAGGATAAAAAGTTGCATTTCATCCACAAACTTCTCCTTCATCATTAATAGAAGACAAAAAGGGAAGATCTATGCTACTCGGGGTCTTCGACAAGGGAACCCACTATCACCTTTTTTTTCTTAATGATAATTGATTGCCTTAGTCGCTTGCTCACCAAGTAGAATAGGAAGGGCTTTCAAGTTGTTAACAAAGGTTTAAGTATCAACAAGTTTGCAAATGACACAATCATCTTTTTTTAAATTGTTAGATGTCTCATCTATAAAACAAACAAGACAGTGAAGATCTTCAAAAGATTCTTAGGACAAAACATCAACCTTAAAAAAAATAAAAAACAGAGATAATGAGCATCAATAATAGCACAAAGGATATCGAAGACTTTGCCCACAAATACACTTGTAAAAAGGGTGCATGACCGAATATTTACTTAGGATTGCCCTTAAATGGGAACCCCAAATCCTTCTCTTTTGGAAGACTATTATTGAAAAAATAGAAAGAAAGATATCAATGTGTTCATCATGTTACCCTTCCAAAGGTAGAATGCTCACCCTAATATAAGCCACTTTGTCCAACCTTTCCACTTAATACATGTCTCTATTTGAGATGCATTAGATAGTGGATACGGAAATAGAAAGATTATTCGTAAACTAAATGTGGAAAGATGACCTACCCCTTATTCAATGGAATACCGTAAGCCTCCCTATAGATAAGGGAGGACTCAGCCTTTTTTTTTTCTTTAAGGATAAGAATAGAGCTCTCCTCGCCAAATAGGTATGGAGATATTACCACGAAGACACTGCATTGTGGAGAAATCTTATAAAGATTAAATTTAAATCCTTCATCATGTACCTTCTGCAAAGGAGCATGGAGGTATATAAAAAAGCACTAAAACCTCAGCATGTACCGCATTCTCCATAGGATGGGTGATGGAGAAAGCACATCTTTCTGGACTGACCCTTGGGTTGACAACGGTATCCTCTTTTGTATTGACTCTCACAAAGCAAAACTGCCATGGTTAAAGAAACGTGGAAAGACAAACAAATTCTAGGACTTGAAACTCTGTAGGAACCTAAAGGATAATGAAGTTAAGGAATGAGCCGAATTAAGCCTTTACTTATCCCAATGGTACTGTCTCAAGAAGTAAACTCATTGAAATGACTACCCAGCGTGACGGGTCTTCACAAAATCTTGGATGATGAATATGGAAAGGAGATGGTGCATAAAGCCATTAGCTCCTGTGACAACCTACAAAAAAAAGAAAAAAGAATGCTCTACTTGACTCTATTTCCAAATCGGTGCCAGTATGCAAGAAAGATAGCGAATCACGAAACAATCTATTTATGCAGAAGATATATACTTATGGTTTATGAACAAAAATTCTTAATATTTTCGAATGACATCTCACTTTTCATAGGGATGGAAAGGAGTTATTGAACATGACCTTAACATACCATCCATTCAAGAATACAAAACTTCTCCTATGAACAAACGTCATTATGGTTTTCTTTTGGAATCTATGGAAAAAAAGAAGAAAGAATCAATGAGTATTCAGAGAGAATACGTGGACTTATGTGACTCTTTGAAAAACTAATCTTGCCTAAATTTTATGTTCTTCCGTTGAAGATTGAGTTTTGGAAATTGATAGTTAAAATGTCTTTAAGCCGGGTTTCTCCACCAAAATCAAATTAAATTCAATTTCCACAAGTCAGCACATTAGTCAATGAAAATGTAAGAGAATTAAACACAATAAGTGTAAGTATTAAGACCTATCAGCTGCTCATAAATGAAAAAAAAAAAAAAAAAAAAAAGGTAGAGGGCCGCTTGTCCTGTCTCATTGGTTAGAAGCGTTAAGATGAGTTTTATATATGTATATATATATATAACACACACACACATACATTGGGAGTGGTAGGAATTAGCAGCATAGGGTTCTTCTGGAGGCATTATTATTATGTGCAATGTCCATTCTCTACCTGTTCAAGATGTGGTGCACGAGTCCTTTTTCATTTCTATTCAGTTTTTCAATTAAGACTGCTCAACCTTAAAGCTCTATGACCCTTCAAAGTACAGGTACAGGGGAACAGATGGCTTTTGGGTCGATTAAGTTTCTTTCTTGTTTAGTCCTTTTGGGCTGTTTTGGTGCTTGCATTGAGAAACTTATAGAAAATTATTGTGCGAAGATGTAAGGGAGAGGGTGGTTCTCAATGAGTCATGTCCTTGTTTCCAAATAATCGCAACAGCTTTTTCTAGAGCCTTTACTCTTTTAGGTCCATACGTGTAATAGTTACTTTTATGTGATCTATTTATTCCTGATTACCAACAACTGAATATTTTCTTTTAATTTTTCTTCTTTCTGAGTAGTCTCATTTGTTGGCATTGTTATTGTATCTCTCTAGCCTTATTCAAGTGTGCAAAGTTATTGTTTTGAGGCAAACTGCCTTGTTTTCCTTCTCATTTCTTTGATTTCGGCTTATGGAATTTCTTCATATTTTTAGCCTAATGTTCATGGAAAAATTTCAGGTCGAGAAGACACAATGTAAGAATTGTCTTGTATGGGCTAAGAGCGATAGCTTAGTGAGGGACATAATCAAATTATCATCGGATATGAAGGTGAGTGAAAACTGGTCTTAGTATTCAACTACTCAAGTTATTTTGACTTACCATTATTTAACCTAGTGGATAGTTTACTTTTCCGAGTGCTAATGTTGCATAGATTTGTTTGGCTAAACCTCTTCGACATTCAGTTCACATCATCAAAAGACATTGACTTGATGTAATCTGTGTTTATTTTAACGATCTGCTCCTAAACTCTTGTCATTGAGCTGTGTTATTAAAGTTTATAGAGCGAGCTCGGTATCCCGCATTATTGATCTTGTGTTCATGCAGCTGGATTTTAATGTCCTTGAATCTCTTAATTGTGCCTGGGTATTTTTCAATGTCAAACATAGATTTTCCGTTATTAACCGTTCATTTGTAAGCAGTGGATTTGACTTTTTAACTGTCAGAGAATCGAAAGTTTGCACGTTTCATATAACGCATATGTTTTACGTGCAGGTGGGGTATATCGTAATGATGGACCCATCTACAGGTGAAAGAACGAACTTGCTGAGAATGAAAGGAGCCAAGGTGGTTGGTGCCTATCATCCATTGATTGATGAAGACCTTATGCGAATGATGCACAGGTATAGCTTCCATTCGATGCAAAAGTTAGAGGTTTGAATCACGCACCGTTTTATGTTATTAAACTCGGAAAACAAAAAAGTTTGGAAGGCAGCCAATGGGCTTGCATTGTAGAATCAAGTTGACATGTTTTGATCAACAGGAGAGATAAAAAGGTGTATGCATGGACAGTTGATGATGTCGATTCGATGAAAAGAATGCTAGTCGAGGGAGTAGATGCTGTCGTTACGAGCAACCCGACACTACTCGGAAGTGTAATGCAAGATATCAGAACTACATGCCTTGAGAATGGTTTTTCACTTCCATCAAGATAATGAAAGTACTTCAACATTCCAACTCCTACCCAAGCTATTCTTTCGTTCTTTTTCCCTTCAATTTCCTCATTGTTCCTCTTATCTTCTGTGGAAGATGTTGATTTGTTTCTAAATAGTTCCTCGTTGATGCGTTGCATACTCTCGGATAATCTTTGATTATTCAGATATACAATATTATATACATCTCATAATAAGAATAAGAACACAAATTTGAAATTTAAGA

mRNA sequence

AAGTTGCGATCCGAATGGTGCTCTCCGGCTCTAGATTTGGAAGGAGGCGTTGGATTGGGCAAAGAACATGGCGCAATCGATTCCCCTTCAGAATCTCTTCCCGACGAATCTTTCATCTCACAATCCTATGCCTCGCTTTTGATCGCAATTCTGCCTCCCATTTTCTTCCATTTCAAGCTCAAGCGCTTTCAGCAGATGCAACAAGGGAAGTGCAAATGGATGAATGATCCTCCACTTGTGTGTGCTCATGGAGGCGACTCATCCAAGGCCTTTCCGAACACTATGGATGCATATAGCTTAGCGCTTCGTTCTCAAGCCAACTGCATTGAAGTTGATGTTTCTCGCTCTTCAGATGGAGTCTTATTTGCACTTCATGACAGTGTTGAAATATTCAGTGGACTTGGTGATATGGACTGGGATTGTTATGGAACCAGCGGCAGGGACTTGCAGAGGATAACTGGATCAAATACTTCTCAAGTTGGAAATTTTAGCATGAAAGAGATAAAAAATCTTGGAGCTTTTTATCAACACACTAATAAATTGCTGGATTTCAACATTCCTACAATTGAAGAAGCATTAGTGTTAATATCAAAATCAGTTAAGCAGGTGATTCTAGATGCAAAGATAGGACCACCGTCATATGAAAATGGGCTTGCAAAGGACATCATTTCTGTTGTCGAGAAGACACAATGTAAGAATTGTCTTGTATGGGCTAAGAGCGATAGCTTAGTGAGGGACATAATCAAATTATCATCGGATATGAAGGTGGGGTATATCGTAATGATGGACCCATCTACAGGTGAAAGAACGAACTTGCTGAGAATGAAAGGAGCCAAGGTGGTTGGTGCCTATCATCCATTGATTGATGAAGACCTTATGCGAATGATGCACAGGAGAGATAAAAAGGTGTATGCATGGACAGTTGATGATGTCGATTCGATGAAAAGAATGCTAGTCGAGGGAGTAGATGCTGTCGTTACGAGCAACCCGACACTACTCGGAAGTGTAATGCAAGATATCAGAACTACATGCCTTGAGAATGGTTTTTCACTTCCATCAAGATAATGAAAGTACTTCAACATTCCAACTCCTACCCAAGCTATTCTTTCGTTCTTTTTCCCTTCAATTTCCTCATTGTTCCTCTTATCTTCTGTGGAAGATGTTGATTTGTTTCTAAATAGTTCCTCGTTGATGCGTTGCATACTCTCGGATAATCTTTGATTATTCAGATATACAATATTATATACATCTCATAATAAGAATAAGAACACAAATTTGAAATTTAAGA

Coding sequence (CDS)

AAGTTGCGATCCGAATGGTGCTCTCCGGCTCTAGATTTGGAAGGAGGCGTTGGATTGGGCAAAGAACATGGCGCAATCGATTCCCCTTCAGAATCTCTTCCCGACGAATCTTTCATCTCACAATCCTATGCCTCGCTTTTGATCGCAATTCTGCCTCCCATTTTCTTCCATTTCAAGCTCAAGCGCTTTCAGCAGATGCAACAAGGGAAGTGCAAATGGATGAATGATCCTCCACTTGTGTGTGCTCATGGAGGCGACTCATCCAAGGCCTTTCCGAACACTATGGATGCATATAGCTTAGCGCTTCGTTCTCAAGCCAACTGCATTGAAGTTGATGTTTCTCGCTCTTCAGATGGAGTCTTATTTGCACTTCATGACAGTGTTGAAATATTCAGTGGACTTGGTGATATGGACTGGGATTGTTATGGAACCAGCGGCAGGGACTTGCAGAGGATAACTGGATCAAATACTTCTCAAGTTGGAAATTTTAGCATGAAAGAGATAAAAAATCTTGGAGCTTTTTATCAACACACTAATAAATTGCTGGATTTCAACATTCCTACAATTGAAGAAGCATTAGTGTTAATATCAAAATCAGTTAAGCAGGTGATTCTAGATGCAAAGATAGGACCACCGTCATATGAAAATGGGCTTGCAAAGGACATCATTTCTGTTGTCGAGAAGACACAATGTAAGAATTGTCTTGTATGGGCTAAGAGCGATAGCTTAGTGAGGGACATAATCAAATTATCATCGGATATGAAGGTGGGGTATATCGTAATGATGGACCCATCTACAGGTGAAAGAACGAACTTGCTGAGAATGAAAGGAGCCAAGGTGGTTGGTGCCTATCATCCATTGATTGATGAAGACCTTATGCGAATGATGCACAGGAGAGATAAAAAGGTGTATGCATGGACAGTTGATGATGTCGATTCGATGAAAAGAATGCTAGTCGAGGGAGTAGATGCTGTCGTTACGAGCAACCCGACACTACTCGGAAGTGTAATGCAAGATATCAGAACTACATGCCTTGAGAATGGTTTTTCACTTCCATCAAGATAA

Protein sequence

KLRSEWCSPALDLEGGVGLGKEHGAIDSPSESLPDESFISQSYASLLIAILPPIFFHFKLKRFQQMQQGKCKWMNDPPLVCAHGGDSSKAFPNTMDAYSLALRSQANCIEVDVSRSSDGVLFALHDSVEIFSGLGDMDWDCYGTSGRDLQRITGSNTSQVGNFSMKEIKNLGAFYQHTNKLLDFNIPTIEEALVLISKSVKQVILDAKIGPPSYENGLAKDIISVVEKTQCKNCLVWAKSDSLVRDIIKLSSDMKVGYIVMMDPSTGERTNLLRMKGAKVVGAYHPLIDEDLMRMMHRRDKKVYAWTVDDVDSMKRMLVEGVDAVVTSNPTLLGSVMQDIRTTCLENGFSLPSR

Homology

[Close]

BLAST of Carg27052 vs. NCBI nr
Match: XP_022930187.1 (glycerophosphodiester phosphodiesterase GDPD4 [Cucurbita moschata])

HSP 1 Score: 568.5 bits (1464), Expect = 1.5e-158
Identity = 288/308 (93.51%), Postives = 288/308 (93.51%), Query Frame = 0


Query: 47  LIAILPPIFFHFKLKRFQQMQQGKCKWMNDPPLVCAHGGDSSKAFPNTMDAYSLALRSQA 106
           LIAILPPIFFHFKLKRFQQMQQGKCKWMNDPPLVCAHGGDSSKAFPNTMDAYSLALRSQA
Sbjct: 42  LIAILPPIFFHFKLKRFQQMQQGKCKWMNDPPLVCAHGGDSSKAFPNTMDAYSLALRSQA 101

Query: 107 NCIEVDVSRSSDGVLFALHDSVEIFSGLGDMDWDCYGTSGRDLQRITGSNTSQVGNFSMK 166
           NCIEVDVSRSSDGVLFALHD                    RDLQRITGSNTSQVGNFSMK
Sbjct: 102 NCIEVDVSRSSDGVLFALHD--------------------RDLQRITGSNTSQVGNFSMK 161

Query: 167 EIKNLGAFYQHTNKLLDFNIPTIEEALVLISKSVKQVILDAKIGPPSYENGLAKDIISVV 226
           EIKNLGAFYQHTNKLLDFNIPTIEEALVLISKSVKQVILDAKIGPPSYENGLAKDIISVV
Sbjct: 162 EIKNLGAFYQHTNKLLDFNIPTIEEALVLISKSVKQVILDAKIGPPSYENGLAKDIISVV 221

Query: 227 EKTQCKNCLVWAKSDSLVRDIIKLSSDMKVGYIVMMDPSTGERTNLLRMKGAKVVGAYHP 286
           EKTQCKNCLVWAKSDSLVRDIIKLSSDMKVGYIVMMDPSTGERTNLLRMKGAKVVGAYHP
Sbjct: 222 EKTQCKNCLVWAKSDSLVRDIIKLSSDMKVGYIVMMDPSTGERTNLLRMKGAKVVGAYHP 281

Query: 287 LIDEDLMRMMHRRDKKVYAWTVDDVDSMKRMLVEGVDAVVTSNPTLLGSVMQDIRTTCLE 346
           LIDEDLMRMMHRRDKKVYAWTVDDVDSMKRMLVEGVDAVVTSNPTLLGSVMQDIRTTCLE
Sbjct: 282 LIDEDLMRMMHRRDKKVYAWTVDDVDSMKRMLVEGVDAVVTSNPTLLGSVMQDIRTTCLE 329

Query: 347 NGFSLPSR 355
           NGFSLPSR
Sbjct: 342 NGFSLPSR 329

[Close]

BLAST of Carg27052 vs. NCBI nr
Match: XP_023521789.1 (glycerophosphodiester phosphodiesterase GDPD4-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 567.0 bits (1460), Expect = 4.5e-158
Identity = 287/308 (93.18%), Postives = 287/308 (93.18%), Query Frame = 0


Query: 47  LIAILPPIFFHFKLKRFQQMQQGKCKWMNDPPLVCAHGGDSSKAFPNTMDAYSLALRSQA 106
           LIAILPPIFFHFKLKRFQQMQQGKCKWMNDPPLVCAHGGDSSKAFPNTMDAYSLALRSQA
Sbjct: 42  LIAILPPIFFHFKLKRFQQMQQGKCKWMNDPPLVCAHGGDSSKAFPNTMDAYSLALRSQA 101

Query: 107 NCIEVDVSRSSDGVLFALHDSVEIFSGLGDMDWDCYGTSGRDLQRITGSNTSQVGNFSMK 166
           NCIEVDVSRSSDGVLFALHD                    RDLQRITGSNTSQVGNFSMK
Sbjct: 102 NCIEVDVSRSSDGVLFALHD--------------------RDLQRITGSNTSQVGNFSMK 161

Query: 167 EIKNLGAFYQHTNKLLDFNIPTIEEALVLISKSVKQVILDAKIGPPSYENGLAKDIISVV 226
           EIKNLGAFYQHTNKLLDFNIPTIEEALVLISKSVKQVILDAKIGPPSYENGLAKDIISVV
Sbjct: 162 EIKNLGAFYQHTNKLLDFNIPTIEEALVLISKSVKQVILDAKIGPPSYENGLAKDIISVV 221

Query: 227 EKTQCKNCLVWAKSDSLVRDIIKLSSDMKVGYIVMMDPSTGERTNLLRMKGAKVVGAYHP 286
           EKTQCKNCLVWAKSDSLVRDIIKLSSDMKVGYIVMMDPSTGERTNLLRMKGAKVVGAYHP
Sbjct: 222 EKTQCKNCLVWAKSDSLVRDIIKLSSDMKVGYIVMMDPSTGERTNLLRMKGAKVVGAYHP 281

Query: 287 LIDEDLMRMMHRRDKKVYAWTVDDVDSMKRMLVEGVDAVVTSNPTLLGSVMQDIRTTCLE 346
           LIDEDLMRMMHRRDKKVYAWTVDDVDSMKRMLVEGVDAVVTSNPTLLG VMQDIRTTCLE
Sbjct: 282 LIDEDLMRMMHRRDKKVYAWTVDDVDSMKRMLVEGVDAVVTSNPTLLGGVMQDIRTTCLE 329

Query: 347 NGFSLPSR 355
           NGFSLPSR
Sbjct: 342 NGFSLPSR 329

[Close]

BLAST of Carg27052 vs. NCBI nr
Match: XP_022974073.1 (glycerophosphodiester phosphodiesterase GDPD4 [Cucurbita maxima])

HSP 1 Score: 566.2 bits (1458), Expect = 7.7e-158
Identity = 287/308 (93.18%), Postives = 287/308 (93.18%), Query Frame = 0


Query: 47  LIAILPPIFFHFKLKRFQQMQQGKCKWMNDPPLVCAHGGDSSKAFPNTMDAYSLALRSQA 106
           LIAILPPIFFHFKLKRFQQMQQGKCKWMNDPPLVCAHGGDSSKAFPNTMDAYSLALRSQA
Sbjct: 42  LIAILPPIFFHFKLKRFQQMQQGKCKWMNDPPLVCAHGGDSSKAFPNTMDAYSLALRSQA 101

Query: 107 NCIEVDVSRSSDGVLFALHDSVEIFSGLGDMDWDCYGTSGRDLQRITGSNTSQVGNFSMK 166
           NCIEVDVSRSSDGVLFALHD                    RDLQRITGSN SQVGNFSMK
Sbjct: 102 NCIEVDVSRSSDGVLFALHD--------------------RDLQRITGSNISQVGNFSMK 161

Query: 167 EIKNLGAFYQHTNKLLDFNIPTIEEALVLISKSVKQVILDAKIGPPSYENGLAKDIISVV 226
           EIKNLGAFYQHTNKLLDFNIPTIEEALVLISKSVKQVILDAKIGPPSYENGLAKDIISVV
Sbjct: 162 EIKNLGAFYQHTNKLLDFNIPTIEEALVLISKSVKQVILDAKIGPPSYENGLAKDIISVV 221

Query: 227 EKTQCKNCLVWAKSDSLVRDIIKLSSDMKVGYIVMMDPSTGERTNLLRMKGAKVVGAYHP 286
           EKTQCKNCLVWAKSDSLVRDIIKLSSDMKVGYIVMMDPSTGERTNLLRMKGAKVVGAYHP
Sbjct: 222 EKTQCKNCLVWAKSDSLVRDIIKLSSDMKVGYIVMMDPSTGERTNLLRMKGAKVVGAYHP 281

Query: 287 LIDEDLMRMMHRRDKKVYAWTVDDVDSMKRMLVEGVDAVVTSNPTLLGSVMQDIRTTCLE 346
           LIDEDLMRMMHRRDKKVYAWTVDDVDSMKRMLVEGVDAVVTSNPTLLGSVMQDIRTTCLE
Sbjct: 282 LIDEDLMRMMHRRDKKVYAWTVDDVDSMKRMLVEGVDAVVTSNPTLLGSVMQDIRTTCLE 329

Query: 347 NGFSLPSR 355
           NGFSLPSR
Sbjct: 342 NGFSLPSR 329

[Close]

BLAST of Carg27052 vs. NCBI nr
Match: XP_004141522.1 (PREDICTED: glycerophosphodiester phosphodiesterase GDPD4 isoform X2 [Cucumis sativus] >KGN52608.1 hypothetical protein Csa_5G647310 [Cucumis sativus])

HSP 1 Score: 506.9 bits (1304), Expect = 5.5e-140
Identity = 252/307 (82.08%), Postives = 272/307 (88.60%), Query Frame = 0


Query: 47  LIAILPPIFFHFKLKRFQQMQQGKCKWMNDPPLVCAHGGDSSKAFPNTMDAYSLALRSQA 106
           +IAILPPI+FHFKLKRFQQ+QQ  CKW+  PPLVCAHGGDSSKAFPNTMDAYS+ALRSQA
Sbjct: 42  IIAILPPIYFHFKLKRFQQIQQRNCKWLTHPPLVCAHGGDSSKAFPNTMDAYSIALRSQA 101

Query: 107 NCIEVDVSRSSDGVLFALHDSVEIFSGLGDMDWDCYGTSGRDLQRITGSNTSQVGNFSMK 166
           NCIEVDVSRSSDGVLFALHD                    RDLQRITGSN+S+VGN+SMK
Sbjct: 102 NCIEVDVSRSSDGVLFALHD--------------------RDLQRITGSNSSKVGNYSMK 161

Query: 167 EIKNLGAFYQHTNKLLDFNIPTIEEALVLISKSVKQVILDAKIGPPSYENGLAKDIISVV 226
           EIKNLGA YQHT+KLLDFNIPTIEEALV ISKSV+QVILDAK+GPPSYENGLAKDIISVV
Sbjct: 162 EIKNLGAVYQHTHKLLDFNIPTIEEALVSISKSVQQVILDAKVGPPSYENGLAKDIISVV 221

Query: 227 EKTQCKNCLVWAKSDSLVRDIIKLSSDMKVGYIVMMDPSTGERTNLLRMKGAKVVGAYHP 286
           EKTQCKNCLVWAKSDSL RDII+ SSD+KVGYIVM DPSTGERTNLLRMKGAKVVG YH 
Sbjct: 222 EKTQCKNCLVWAKSDSLARDIIRSSSDIKVGYIVMKDPSTGERTNLLRMKGAKVVGVYHQ 281

Query: 287 LIDEDLMRMMHRRDKKVYAWTVDDVDSMKRMLVEGVDAVVTSNPTLLGSVMQDIRTTCLE 346
           LID DLMR++HRRD+K YAWTVDD++SMKRMLVEGVDAVVTSNPTLLGSVMQ+ RTTCLE
Sbjct: 282 LIDGDLMRILHRRDRKAYAWTVDDIESMKRMLVEGVDAVVTSNPTLLGSVMQESRTTCLE 328

Query: 347 NGFSLPS 354
           NGFS+ S
Sbjct: 342 NGFSISS 328

[Close]

BLAST of Carg27052 vs. NCBI nr
Match: XP_011656047.1 (PREDICTED: glycerophosphodiester phosphodiesterase GDPD4 isoform X1 [Cucumis sativus])

HSP 1 Score: 501.9 bits (1291), Expect = 1.8e-138
Identity = 252/309 (81.55%), Postives = 272/309 (88.03%), Query Frame = 0


Query: 47  LIAILPPIFFHFKLKRFQQMQQGKCKWMNDPPLVCAHGGDSSKAFPNTMDAYSLALRSQA 106
           +IAILPPI+FHFKLKRFQQ+QQ  CKW+  PPLVCAHGGDSSKAFPNTMDAYS+ALRSQA
Sbjct: 42  IIAILPPIYFHFKLKRFQQIQQRNCKWLTHPPLVCAHGGDSSKAFPNTMDAYSIALRSQA 101

Query: 107 NCIEVDVSRSSDGVLFALHDSVEIFSGLGDMDWDCYGTSGRDLQRITGSNTSQVGNFSMK 166
           NCIEVDVSRSSDGVLFALHD                    RDLQRITGSN+S+VGN+SMK
Sbjct: 102 NCIEVDVSRSSDGVLFALHD--------------------RDLQRITGSNSSKVGNYSMK 161

Query: 167 EIKNLGAFYQHTNKLLDFNIPTIEEALVLISKSVKQVILDAKIGPPSYENGLAKDIISVV 226
           EIKNLGA YQHT+KLLDFNIPTIEEALV ISKSV+QVILDAK+GPPSYENGLAKDIISVV
Sbjct: 162 EIKNLGAVYQHTHKLLDFNIPTIEEALVSISKSVQQVILDAKVGPPSYENGLAKDIISVV 221

Query: 227 EKTQCKNCLVWAKSDSLVRDIIKLSSDMK--VGYIVMMDPSTGERTNLLRMKGAKVVGAY 286
           EKTQCKNCLVWAKSDSL RDII+ SSD+K  VGYIVM DPSTGERTNLLRMKGAKVVG Y
Sbjct: 222 EKTQCKNCLVWAKSDSLARDIIRSSSDIKLQVGYIVMKDPSTGERTNLLRMKGAKVVGVY 281

Query: 287 HPLIDEDLMRMMHRRDKKVYAWTVDDVDSMKRMLVEGVDAVVTSNPTLLGSVMQDIRTTC 346
           H LID DLMR++HRRD+K YAWTVDD++SMKRMLVEGVDAVVTSNPTLLGSVMQ+ RTTC
Sbjct: 282 HQLIDGDLMRILHRRDRKAYAWTVDDIESMKRMLVEGVDAVVTSNPTLLGSVMQESRTTC 330

Query: 347 LENGFSLPS 354
           LENGFS+ S
Sbjct: 342 LENGFSISS 330

[Close]

BLAST of Carg27052 vs. TAIR10
Match: AT1G71340.1 (PLC-like phosphodiesterases superfamily protein)

HSP 1 Score: 379.8 bits (974), Expect = 1.8e-105
Identity = 185/309 (59.87%), Postives = 234/309 (75.73%), Query Frame = 0


Query: 43  YASLLIAILPPIFFHFKLKRFQQMQQGKCKWMNDPPLVCAHGGDSSKAFPNTMDAYSLAL 102
           +A + +AI PP++FHFKL+R +Q+   KC W++ PPLVCAHGGDS+ AFPNTMDAYS A+
Sbjct: 38  FAVIFLAIFPPLYFHFKLRRIRQIVAQKCDWLHHPPLVCAHGGDSTLAFPNTMDAYSFAI 97

Query: 103 RSQANCIEVDVSRSSDGVLFALHDSVEIFSGLGDMDWDCYGTSGRDLQRITGSNTSQVGN 162
           RS+ +CIEVDVSRSSDGVLFALH+                    RDLQRI  +++ QVG+
Sbjct: 98  RSRVDCIEVDVSRSSDGVLFALHN--------------------RDLQRIARNSSVQVGD 157

Query: 163 FSMKEIKNLGAFYQHTNKLLDFNIPTIEEALVLISKSVKQVILDAKIGPPSYENGLAKDI 222
            SMK+IK L         L    IPT+EEAL LIS SV++VILDAK+GPP YE GLA+DI
Sbjct: 158 LSMKQIKELDVSEIVKGTLGSSRIPTLEEALALISNSVRKVILDAKVGPPMYEKGLAQDI 217

Query: 223 ISVVEKTQCKNCLVWAKSDSLVRDIIKLSSDMKVGYIVMMDPSTGERTNLLRMKGAKVVG 282
           +S++E+ QC NC+VWAKSD+L RDII+ + D  VGYIVM+DP TG R +LLRMKGA+VVG
Sbjct: 218 LSIIERAQCNNCIVWAKSDTLARDIIRRAPDTMVGYIVMVDPLTGARNSLLRMKGARVVG 277

Query: 283 AYHPLIDEDLMRMMHRRDKKVYAWTVDDVDSMKRMLVEGVDAVVTSNPTLLGSVMQDIRT 342
            YHPLIDE+L+R++ RR+K+VYAWTVDD D MKRML  GVDAVVTS+P++   +M+D+RT
Sbjct: 278 VYHPLIDEELVRVVRRRNKEVYAWTVDDADPMKRMLHLGVDAVVTSDPSMFQGLMEDLRT 326

Query: 343 TCLENGFSL 352
            CLE GFS+
Sbjct: 338 ECLEEGFSI 326

[Close]

BLAST of Carg27052 vs. TAIR10
Match: AT5G08030.1 (PLC-like phosphodiesterases superfamily protein)

HSP 1 Score: 43.1 bits (100), Expect = 4.1e-04
Identity = 40/149 (26.85%), Postives = 66/149 (44.30%), Query Frame = 0


Query: 78  PLVCAHGGDSSKAFPNTMDAYSLALRSQANCIEVDVSRSSDGVLFALHDSVEIFSGLGDM 137
           P   AH G + +    T  AY  A+   A+ IE D+  S DGVL   HD V +       
Sbjct: 44  PYNLAHRGSNGELPEETAPAYMRAIEEGADFIETDILSSKDGVLICHHD-VNLDDTTDVA 103

Query: 138 DWDCYGTSGRDLQRITGSNTSQ--VGNFSMKEIKNLGAFYQHTNKLLDFN----IPTIEE 197
           D   +    R  + + G N +     +F++KE+K LGA  ++  +   +N    I T +E
Sbjct: 104 DHKEFADRKRTYE-VQGMNMTGFFTVDFTLKELKTLGAKQRYPFRDQQYNGKFPIITFDE 163

Query: 198 ALVLISKSVKQVILDAKIGPPSYENGLAK 221
            + +   + + V +  +I  P + N   K
Sbjct: 164 YISIALDAPRVVGIYPEIKNPVFMNQQVK 190

[Close]

BLAST of Carg27052 vs. Swiss-Prot
Match: sp|F4I8H8|GDPD4_ARATH (Glycerophosphodiester phosphodiesterase GDPD4 OS=Arabidopsis thaliana OX=3702 GN=GDPD4 PE=2 SV=1)

HSP 1 Score: 379.8 bits (974), Expect = 3.3e-104
Identity = 185/309 (59.87%), Postives = 234/309 (75.73%), Query Frame = 0


Query: 43  YASLLIAILPPIFFHFKLKRFQQMQQGKCKWMNDPPLVCAHGGDSSKAFPNTMDAYSLAL 102
           +A + +AI PP++FHFKL+R +Q+   KC W++ PPLVCAHGGDS+ AFPNTMDAYS A+
Sbjct: 38  FAVIFLAIFPPLYFHFKLRRIRQIVAQKCDWLHHPPLVCAHGGDSTLAFPNTMDAYSFAI 97

Query: 103 RSQANCIEVDVSRSSDGVLFALHDSVEIFSGLGDMDWDCYGTSGRDLQRITGSNTSQVGN 162
           RS+ +CIEVDVSRSSDGVLFALH+                    RDLQRI  +++ QVG+
Sbjct: 98  RSRVDCIEVDVSRSSDGVLFALHN--------------------RDLQRIARNSSVQVGD 157

Query: 163 FSMKEIKNLGAFYQHTNKLLDFNIPTIEEALVLISKSVKQVILDAKIGPPSYENGLAKDI 222
            SMK+IK L         L    IPT+EEAL LIS SV++VILDAK+GPP YE GLA+DI
Sbjct: 158 LSMKQIKELDVSEIVKGTLGSSRIPTLEEALALISNSVRKVILDAKVGPPMYEKGLAQDI 217

Query: 223 ISVVEKTQCKNCLVWAKSDSLVRDIIKLSSDMKVGYIVMMDPSTGERTNLLRMKGAKVVG 282
           +S++E+ QC NC+VWAKSD+L RDII+ + D  VGYIVM+DP TG R +LLRMKGA+VVG
Sbjct: 218 LSIIERAQCNNCIVWAKSDTLARDIIRRAPDTMVGYIVMVDPLTGARNSLLRMKGARVVG 277

Query: 283 AYHPLIDEDLMRMMHRRDKKVYAWTVDDVDSMKRMLVEGVDAVVTSNPTLLGSVMQDIRT 342
            YHPLIDE+L+R++ RR+K+VYAWTVDD D MKRML  GVDAVVTS+P++   +M+D+RT
Sbjct: 278 VYHPLIDEELVRVVRRRNKEVYAWTVDDADPMKRMLHLGVDAVVTSDPSMFQGLMEDLRT 326

Query: 343 TCLENGFSL 352
            CLE GFS+
Sbjct: 338 ECLEEGFSI 326

[Close]

BLAST of Carg27052 vs. Swiss-Prot
Match: sp|O07592|YHDW_BACSU (Putative glycerophosphodiester phosphodiesterase YhdW OS=Bacillus subtilis (strain 168) OX=224308 GN=yhdW PE=3 SV=1)

HSP 1 Score: 57.8 bits (138), Expect = 2.9e-07
Identity = 55/256 (21.48%), Postives = 112/256 (43.75%), Query Frame = 0


Query: 80  VCAHGGDSSKAFPNTMDAYSLALRSQANCIEVDVSRSSDGVLFALHDSVEIFSGLGDMDW 139
           + AH G S  A  NT+ A+ LA++  A+ IE+DV  + D  +  +HD             
Sbjct: 3   IIAHRGASGYAPENTIAAFDLAVKMNADMIELDVQLTKDRQIVVIHD------------- 62

Query: 140 DCYGTSGRDLQRITGSNTSQVGNFSMKEIKNLGAFYQHTNKLLDFNIPTIEEALVLISKS 199
                   D    T + +  V +F+++E++ L A   +        IPT+E  L    K 
Sbjct: 63  --------DRVDRTTNGSGFVKDFTLEELQKLDAGSWYGPAFQGERIPTLEAVLKRYHKK 122

Query: 200 VKQVILDAKIGPPSYENGLAKDIISVVEKTQCK-NCLVWAKSDSLVRDIIKLSSDMKVGY 259
           +  ++++ K G PS + G+ +++  ++ +     N +V +     V+   +L   +    
Sbjct: 123 I-GLLIELK-GHPS-QVGIEEEVGQLLGQFSFSINNIVQSFQFRSVQRFRELYPSIPTAV 182

Query: 260 IVMMDPSTGERTNLLRMKG-AKVVGAYHPLIDEDLMRMMHRRDKKVYAWTVDDVDSMKRM 319
           I   +     R  +   +  A  V   H  ++  ++  +++    ++AWTV++  +  ++
Sbjct: 183 ITRPNFGMLSRNQMKAFRSFANYVNIKHTRLNRLMIGSINKNGLNIFAWTVNNQKTAAKL 234

Query: 320 LVEGVDAVVTSNPTLL 334
              GVD +VT  P  +
Sbjct: 243 QAMGVDGIVTDYPDFI 234

[Close]

BLAST of Carg27052 vs. Swiss-Prot
Match: sp|O14169|PGC1_SCHPO (Phosphatidylglycerol phospholipase C OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=SPAC4D7.02c PE=3 SV=2)

HSP 1 Score: 55.1 bits (131), Expect = 1.9e-06
Identity = 69/272 (25.37%), Postives = 120/272 (44.12%), Query Frame = 0


Query: 77  PPLVCAHGGDSSKAFPNTMDAYSLALRSQANCIEVDVSRSSDGVLFALHDSVEIFSGLGD 136
           PPLV AH G  +K   NT+ A+  A+++ A+C+E DV  + D V+  LHD          
Sbjct: 31  PPLVIAHRGYKAKYPENTILAFQQAVKAGADCVETDVRLTKDEVVCILHD---------- 90

Query: 137 MDWDCYGTSGRDLQRITGSNTSQVGNFSMKEIKNLGAFYQHTNKLLDFNIPTIEEALVLI 196
                     R+L R+ G +   V +    E+ N G F   T +     +PT E+ L  +
Sbjct: 91  ----------RNLNRVFGVDV-DVRDLDY-ELDN-GHF--RTIQEPHEPLPTYEQFLHEL 150

Query: 197 SKSVKQVIL-------DAKIGPPSYENGLAKDIISVVEKTQCKNCLVWAKSDSLVRDIIK 256
           +K     +L       D  I P   +  L  +      K +   CL W+       D   
Sbjct: 151 TKHPGVNLLVDIKPVNDLLIIPRMVDAMLRVNSDLDFWKDKVSFCL-WSHRFIPACDRYA 210

Query: 257 LSSDMKVGYIVMMDPSTGERTNLL--RMKGAKVVGAYHPL-IDEDLMRMMHRRDKKVYAW 316
            S  +   Y +  + +  ER  ++  R+KG  +  A   L   +D + ++H + K+V+AW
Sbjct: 211 PSIPL---YHIGFNFAYAERHFVMHPRVKGVSMAVALFLLPHSQDFVDLVHAQGKQVFAW 270

Query: 317 TVDDVDSMKRMLVEGVDAVVTSNPTLLGSVMQ 339
           T++   S+   L+ G D +++ +P +  ++ Q
Sbjct: 271 TLNTPSSIYLALIRGCDGLLSDDPVMARALSQ 273

[Close]

BLAST of Carg27052 vs. Swiss-Prot
Match: sp|P54527|YQIK_BACSU (Uncharacterized protein YqiK OS=Bacillus subtilis (strain 168) OX=224308 GN=yqiK PE=4 SV=2)

HSP 1 Score: 53.5 bits (127), Expect = 5.5e-06
Identity = 56/265 (21.13%), Postives = 111/265 (41.89%), Query Frame = 0


Query: 80  VCAHGGDSSKAFPNTMDAYSLALRSQANCIEVDVSRSSDGVLFALHDSVEIFSGLGDMDW 139
           + AH G S +   NTM A+   + + A+ IE+DV  + DG +  +HD             
Sbjct: 4   IFAHRGASGQFPENTMLAFEKGIEAGADGIELDVQLTKDGRIVVIHD------------- 63

Query: 140 DCYGTSGRDLQRITGSNTSQVGNFSMKEIKNLGAFYQHTNKLLDFNIPTIEEALVLISKS 199
                    L R T S    V + +  E+K   A   H     D  +P +E+ L    K 
Sbjct: 64  -------ERLNRTT-SLKGFVKDTAYDEVKTANAAAGHDQAYSDIKVPLLEDVLSWAVKK 123

Query: 200 VKQVILDAKIGPPSYENGLAKDIISVVEKTQCKNCLVWAKSDSLVRDIIKLSSDMKVGYI 259
              + ++ K     YE G+ + ++  V++   ++ ++ +   +   D + L + +   +I
Sbjct: 124 DFLINIELKNSVIRYE-GMEEKVLEAVKRFNVEDRVILS---TFNHDSLALCARL-APHI 183

Query: 260 VMMDPSTGERTNLLRMKGAKVVGAYHPLID-----EDLMRMMHRRDKKVYAWTVDDVDSM 319
                ++       R   +     YHP I+     +++++ M     KV  +TV+  + M
Sbjct: 184 ERAVLTSDVLYQADRYIASIPASGYHPKINSPGVTDEVLKKMRNGLIKVRPYTVNRPEDM 242

Query: 320 KRMLVEGVDAVVTSNPTLLGSVMQD 340
           KR++  G D + T  P    +++++
Sbjct: 244 KRLIEAGADGMFTDFPEKASALLKN 242

[Close]

BLAST of Carg27052 vs. TrEMBL
Match: tr|A0A0A0KSR2|A0A0A0KSR2_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G647310 PE=4 SV=1)

HSP 1 Score: 506.9 bits (1304), Expect = 3.6e-140
Identity = 252/307 (82.08%), Postives = 272/307 (88.60%), Query Frame = 0


Query: 47  LIAILPPIFFHFKLKRFQQMQQGKCKWMNDPPLVCAHGGDSSKAFPNTMDAYSLALRSQA 106
           +IAILPPI+FHFKLKRFQQ+QQ  CKW+  PPLVCAHGGDSSKAFPNTMDAYS+ALRSQA
Sbjct: 42  IIAILPPIYFHFKLKRFQQIQQRNCKWLTHPPLVCAHGGDSSKAFPNTMDAYSIALRSQA 101

Query: 107 NCIEVDVSRSSDGVLFALHDSVEIFSGLGDMDWDCYGTSGRDLQRITGSNTSQVGNFSMK 166
           NCIEVDVSRSSDGVLFALHD                    RDLQRITGSN+S+VGN+SMK
Sbjct: 102 NCIEVDVSRSSDGVLFALHD--------------------RDLQRITGSNSSKVGNYSMK 161

Query: 167 EIKNLGAFYQHTNKLLDFNIPTIEEALVLISKSVKQVILDAKIGPPSYENGLAKDIISVV 226
           EIKNLGA YQHT+KLLDFNIPTIEEALV ISKSV+QVILDAK+GPPSYENGLAKDIISVV
Sbjct: 162 EIKNLGAVYQHTHKLLDFNIPTIEEALVSISKSVQQVILDAKVGPPSYENGLAKDIISVV 221

Query: 227 EKTQCKNCLVWAKSDSLVRDIIKLSSDMKVGYIVMMDPSTGERTNLLRMKGAKVVGAYHP 286
           EKTQCKNCLVWAKSDSL RDII+ SSD+KVGYIVM DPSTGERTNLLRMKGAKVVG YH 
Sbjct: 222 EKTQCKNCLVWAKSDSLARDIIRSSSDIKVGYIVMKDPSTGERTNLLRMKGAKVVGVYHQ 281

Query: 287 LIDEDLMRMMHRRDKKVYAWTVDDVDSMKRMLVEGVDAVVTSNPTLLGSVMQDIRTTCLE 346
           LID DLMR++HRRD+K YAWTVDD++SMKRMLVEGVDAVVTSNPTLLGSVMQ+ RTTCLE
Sbjct: 282 LIDGDLMRILHRRDRKAYAWTVDDIESMKRMLVEGVDAVVTSNPTLLGSVMQESRTTCLE 328

Query: 347 NGFSLPS 354
           NGFS+ S
Sbjct: 342 NGFSISS 328

[Close]

BLAST of Carg27052 vs. TrEMBL
Match: tr|A0A1S3CAB9|A0A1S3CAB9_CUCME (glycerophosphodiester phosphodiesterase GDPD4 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103498627 PE=4 SV=1)

HSP 1 Score: 498.8 bits (1283), Expect = 9.9e-138
Identity = 249/306 (81.37%), Postives = 268/306 (87.58%), Query Frame = 0


Query: 48  IAILPPIFFHFKLKRFQQMQQGKCKWMNDPPLVCAHGGDSSKAFPNTMDAYSLALRSQAN 107
           IAILPPI+FHFKLKR QQ+QQ  C W+  PPLVCAHGGDSSKAFPNTMDAY++ALRSQAN
Sbjct: 43  IAILPPIYFHFKLKRLQQIQQKNCNWLTHPPLVCAHGGDSSKAFPNTMDAYTIALRSQAN 102

Query: 108 CIEVDVSRSSDGVLFALHDSVEIFSGLGDMDWDCYGTSGRDLQRITGSNTSQVGNFSMKE 167
           CIEVDVSRSSDGVLFALHD                    RDLQRITGSNTS+VGN+S KE
Sbjct: 103 CIEVDVSRSSDGVLFALHD--------------------RDLQRITGSNTSKVGNYSRKE 162

Query: 168 IKNLGAFYQHTNKLLDFNIPTIEEALVLISKSVKQVILDAKIGPPSYENGLAKDIISVVE 227
           IKNL A YQHT+KLLDFNIPTIEEAL LISKSV+QVILDAK+GPPSYENGLAKDIISVVE
Sbjct: 163 IKNLVAVYQHTHKLLDFNIPTIEEALGLISKSVQQVILDAKVGPPSYENGLAKDIISVVE 222

Query: 228 KTQCKNCLVWAKSDSLVRDIIKLSSDMKVGYIVMMDPSTGERTNLLRMKGAKVVGAYHPL 287
           KTQCKNCLVWAKSDSL RDII+ S D+KVGYIVM DPSTGERTNLLRMKGAKVVG YHPL
Sbjct: 223 KTQCKNCLVWAKSDSLARDIIRSSLDIKVGYIVMKDPSTGERTNLLRMKGAKVVGVYHPL 282

Query: 288 IDEDLMRMMHRRDKKVYAWTVDDVDSMKRMLVEGVDAVVTSNPTLLGSVMQDIRTTCLEN 347
           ID DL+R++HRRD+KVYAWTVDD++SMKRMLVEGVDAVVTSNPTLLGSVMQD RTTCLEN
Sbjct: 283 IDGDLIRILHRRDRKVYAWTVDDIESMKRMLVEGVDAVVTSNPTLLGSVMQDTRTTCLEN 328

Query: 348 GFSLPS 354
           GFS+ S
Sbjct: 343 GFSISS 328

[Close]

BLAST of Carg27052 vs. TrEMBL
Match: tr|A0A1S3CAF8|A0A1S3CAF8_CUCME (glycerophosphodiester phosphodiesterase GDPD4 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103498627 PE=4 SV=1)

HSP 1 Score: 493.8 bits (1270), Expect = 3.2e-136
Identity = 249/308 (80.84%), Postives = 268/308 (87.01%), Query Frame = 0


Query: 48  IAILPPIFFHFKLKRFQQMQQGKCKWMNDPPLVCAHGGDSSKAFPNTMDAYSLALRSQAN 107
           IAILPPI+FHFKLKR QQ+QQ  C W+  PPLVCAHGGDSSKAFPNTMDAY++ALRSQAN
Sbjct: 43  IAILPPIYFHFKLKRLQQIQQKNCNWLTHPPLVCAHGGDSSKAFPNTMDAYTIALRSQAN 102

Query: 108 CIEVDVSRSSDGVLFALHDSVEIFSGLGDMDWDCYGTSGRDLQRITGSNTSQVGNFSMKE 167
           CIEVDVSRSSDGVLFALHD                    RDLQRITGSNTS+VGN+S KE
Sbjct: 103 CIEVDVSRSSDGVLFALHD--------------------RDLQRITGSNTSKVGNYSRKE 162

Query: 168 IKNLGAFYQHTNKLLDFNIPTIEEALVLISKSVKQVILDAKIGPPSYENGLAKDIISVVE 227
           IKNL A YQHT+KLLDFNIPTIEEAL LISKSV+QVILDAK+GPPSYENGLAKDIISVVE
Sbjct: 163 IKNLVAVYQHTHKLLDFNIPTIEEALGLISKSVQQVILDAKVGPPSYENGLAKDIISVVE 222

Query: 228 KTQCKNCLVWAKSDSLVRDIIKLSSDMK--VGYIVMMDPSTGERTNLLRMKGAKVVGAYH 287
           KTQCKNCLVWAKSDSL RDII+ S D+K  VGYIVM DPSTGERTNLLRMKGAKVVG YH
Sbjct: 223 KTQCKNCLVWAKSDSLARDIIRSSLDIKLQVGYIVMKDPSTGERTNLLRMKGAKVVGVYH 282

Query: 288 PLIDEDLMRMMHRRDKKVYAWTVDDVDSMKRMLVEGVDAVVTSNPTLLGSVMQDIRTTCL 347
           PLID DL+R++HRRD+KVYAWTVDD++SMKRMLVEGVDAVVTSNPTLLGSVMQD RTTCL
Sbjct: 283 PLIDGDLIRILHRRDRKVYAWTVDDIESMKRMLVEGVDAVVTSNPTLLGSVMQDTRTTCL 330

Query: 348 ENGFSLPS 354
           ENGFS+ S
Sbjct: 343 ENGFSISS 330

[Close]

BLAST of Carg27052 vs. TrEMBL
Match: tr|A0A2I4FRB1|A0A2I4FRB1_9ROSI (glycerophosphodiester phosphodiesterase GDPD4 isoform X1 OS=Juglans regia OX=51240 GN=LOC109001390 PE=4 SV=1)

HSP 1 Score: 422.5 bits (1085), Expect = 9.0e-115
Identity = 205/304 (67.43%), Postives = 248/304 (81.58%), Query Frame = 0


Query: 48  IAILPPIFFHFKLKRFQQMQQGKCKWMNDPPLVCAHGGDSSKAFPNTMDAYSLALRSQAN 107
           +A+LPP+FFHF+LKRF ++++  C W+NDPPLVCAHGGDS+KAFPNTM AY +ALRSQA+
Sbjct: 51  VALLPPLFFHFRLKRFHEIRERNCGWLNDPPLVCAHGGDSTKAFPNTMAAYHMALRSQAD 110

Query: 108 CIEVDVSRSSDGVLFALHDSVEIFSGLGDMDWDCYGTSGRDLQRITGSNTSQVGNFSMKE 167
           CIE+DVSRSSDGVLFALHD                    RDLQR++G++TS+VG  S KE
Sbjct: 111 CIEIDVSRSSDGVLFALHD--------------------RDLQRMSGNSTSKVGYLSTKE 170

Query: 168 IKNLGAFYQHTNKLLDFNIPTIEEALVLISKSVKQVILDAKIGPPSYENGLAKDIISVVE 227
           I+ LG+ +Q + K  D +IPT+E+AL+LIS SV+QVILDAK+GPPSYE GLAKDI+SVVE
Sbjct: 171 IRELGSAHQSSQKFHDESIPTLEDALMLISSSVRQVILDAKVGPPSYEKGLAKDILSVVE 230

Query: 228 KTQCKNCLVWAKSDSLVRDIIKLSSDMKVGYIVMMDPSTGERTNLLRMKGAKVVGAYHPL 287
           +TQCKNCLVWAKSD+L RD+IKLS D+ VGYIVM DPSTG RTNLLRM+GA VVG YHPL
Sbjct: 231 RTQCKNCLVWAKSDNLARDVIKLSPDIVVGYIVMKDPSTGARTNLLRMRGAGVVGVYHPL 290

Query: 288 IDEDLMRMMHRRDKKVYAWTVDDVDSMKRMLVEGVDAVVTSNPTLLGSVMQDIRTTCLEN 347
           +DE L++++H  +KKVYAWTVDD DSM++ML+E VDAVVTSNPTLL   MQDIRT CLE 
Sbjct: 291 VDEKLVKILHGTNKKVYAWTVDDTDSMQKMLIERVDAVVTSNPTLLQRRMQDIRTQCLEE 334

Query: 348 GFSL 352
           GF L
Sbjct: 351 GFFL 334

[Close]

BLAST of Carg27052 vs. TrEMBL
Match: tr|A0A061FJ84|A0A061FJ84_THECC (PLC-like phosphodiesterases superfamily protein isoform 1 OS=Theobroma cacao OX=3641 GN=TCM_036063 PE=4 SV=1)

HSP 1 Score: 421.4 bits (1082), Expect = 2.0e-114
Identity = 213/321 (66.36%), Postives = 248/321 (77.26%), Query Frame = 0


Query: 40  SQSYASLL---------IAILPPIFFHFKLKRFQQMQQGKCKWMNDPPLVCAHGGDSSKA 99
           S SY SL+         IA+LPPIFFHF+L+RF QMQ  +C W+N+PPLVCAHGGDS+ A
Sbjct: 26  SSSYKSLVHFILILLAFIALLPPIFFHFRLRRFHQMQLRRCGWLNNPPLVCAHGGDSTNA 85

Query: 100 FPNTMDAYSLALRSQANCIEVDVSRSSDGVLFALHDSVEIFSGLGDMDWDCYGTSGRDLQ 159
           FPNTM AY  ALRSQ +CIE+D+SRSSDGVLFALHD                  +GRDLQ
Sbjct: 86  FPNTMSAYQFALRSQVDCIEIDISRSSDGVLFALHD-----------------RTGRDLQ 145

Query: 160 RITGSNTSQVGNFSMKEIKNLGAFYQHTNKLLDFNIPTIEEALVLISKSVKQVILDAKIG 219
           RITG++TS+VG+   KEIK L   +Q      D  IPTIE+AL+LIS+SV+QVILDAK+G
Sbjct: 146 RITGNSTSKVGHLRSKEIKELDVSHQSG----DSKIPTIEDALMLISRSVRQVILDAKVG 205

Query: 220 PPSYENGLAKDIISVVEKTQCKNCLVWAKSDSLVRDIIKLSSDMKVGYIVMMDPSTGERT 279
           PPSYE GLAKDI+  VEK QCKNC++WAKSDSL RDIIKLSSD+KVGYIVM+DPSTG RT
Sbjct: 206 PPSYEKGLAKDILFAVEKMQCKNCIIWAKSDSLTRDIIKLSSDVKVGYIVMVDPSTGART 265

Query: 280 NLLRMKGAKVVGAYHPLIDEDLMRMMHRRDKKVYAWTVDDVDSMKRMLVEGVDAVVTSNP 339
           NLLRMKGA+VVG YHPLIDE L++++H R+KKVYAWTVDD DSM RML E  DA+VTSNP
Sbjct: 266 NLLRMKGARVVGVYHPLIDERLVKILHGREKKVYAWTVDDADSMTRMLHEHADAIVTSNP 325

Query: 340 TLLGSVMQDIRTTCLENGFSL 352
           +LL   MQD RT CLE GFSL
Sbjct: 326 SLLQHTMQDTRTQCLEEGFSL 325

The following BLAST results are available for this feature:

BLAST of Carg27052 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022930187.1	1.5e-158	93.51	glycerophosphodiester phosphodiesterase GDPD4 [Cucurbita moschata]	[more]
XP_023521789.1	4.5e-158	93.18	glycerophosphodiester phosphodiesterase GDPD4-like [Cucurbita pepo subsp. pepo]	[more]
XP_022974073.1	7.7e-158	93.18	glycerophosphodiester phosphodiesterase GDPD4 [Cucurbita maxima]	[more]
XP_004141522.1	5.5e-140	82.08	PREDICTED: glycerophosphodiester phosphodiesterase GDPD4 isoform X2 [Cucumis sat...	[more]
XP_011656047.1	1.8e-138	81.55	PREDICTED: glycerophosphodiester phosphodiesterase GDPD4 isoform X1 [Cucumis sat...	[more]

BLAST of Carg27052 vs. TAIR10


Match Name	E-value	Identity	Description
AT1G71340.1	1.8e-105	59.87	PLC-like phosphodiesterases superfamily protein	[more]
AT5G08030.1	4.1e-04	26.85	PLC-like phosphodiesterases superfamily protein	[more]

BLAST of Carg27052 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|F4I8H8\|GDPD4_ARATH	3.3e-104	59.87	Glycerophosphodiester phosphodiesterase GDPD4 OS=Arabidopsis thaliana OX=3702 GN...	[more]
sp\|O07592\|YHDW_BACSU	2.9e-07	21.48	Putative glycerophosphodiester phosphodiesterase YhdW OS=Bacillus subtilis (stra...	[more]
sp\|O14169\|PGC1_SCHPO	1.9e-06	25.37	Phosphatidylglycerol phospholipase C OS=Schizosaccharomyces pombe (strain 972 / ...	[more]
sp\|P54527\|YQIK_BACSU	5.5e-06	21.13	Uncharacterized protein YqiK OS=Bacillus subtilis (strain 168) OX=224308 GN=yqiK...	[more]

BLAST of Carg27052 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A0A0KSR2\|A0A0A0KSR2_CUCSA	3.6e-140	82.08	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G647310 PE=4 SV=1	[more]
tr\|A0A1S3CAB9\|A0A1S3CAB9_CUCME	9.9e-138	81.37	glycerophosphodiester phosphodiesterase GDPD4 isoform X2 OS=Cucumis melo OX=3656...	[more]
tr\|A0A1S3CAF8\|A0A1S3CAF8_CUCME	3.2e-136	80.84	glycerophosphodiester phosphodiesterase GDPD4 isoform X1 OS=Cucumis melo OX=3656...	[more]
tr\|A0A2I4FRB1\|A0A2I4FRB1_9ROSI	9.0e-115	67.43	glycerophosphodiester phosphodiesterase GDPD4 isoform X1 OS=Juglans regia OX=512...	[more]
tr\|A0A061FJ84\|A0A061FJ84_THECC	2.0e-114	66.36	PLC-like phosphodiesterases superfamily protein isoform 1 OS=Theobroma cacao OX=...	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Molecular Function**
Term	Definition
GO:0008889	glycerophosphodiester phosphodiesterase activity
GO:0008081	phosphoric diester hydrolase activity

Vocabulary: **Biological Process**
Term	Definition
GO:0006629	lipid metabolic process

Vocabulary: **INTERPRO**
Term	Definition
IPR004129	GlyceroP-diester-Pdiesterase
IPR030395	GP_PDE_dom
IPR017946	PLC-like_Pdiesterase_TIM-brl

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0046486	glycerolipid metabolic process
biological_process	GO:0006071	glycerol metabolic process
biological_process	GO:0009395	phospholipid catabolic process
biological_process	GO:0006629	lipid metabolic process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0008889	glycerophosphodiester phosphodiesterase activity
molecular_function	GO:0008081	phosphoric diester hydrolase activity

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg27052-RA	Carg27052-RA	mRNA

InterPro

Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR017946	PLC-like phosphodiesterase, TIM beta/alpha-barrel domain superfamily	GENE3D	G3DSA:3.20.20.190		coord: 70..340 e-value: 1.1E-39 score: 138.5
IPR017946	PLC-like phosphodiesterase, TIM beta/alpha-barrel domain superfamily	SUPERFAMILY	SSF51695	PLC-like phosphodiesterases	coord: 76..334
IPR030395	Glycerophosphodiester phosphodiesterase domain	PFAM	PF03009	GDPD	coord: 88..330 e-value: 2.4E-18 score: 66.7
IPR030395	Glycerophosphodiester phosphodiesterase domain	PROSITE	PS51704	GP_PDE	coord: 78..337 score: 19.957
IPR004129	Glycerophosphoryl diester phosphodiesterase	PANTHER	PTHR23344	GLYCEROPHOSPHORYL DIESTER PHOSPHODIESTERASE	coord: 45..339
None	No IPR available	CDD	cd08556	GDPD	coord: 80..329 e-value: 1.08467E-38 score: 136.624

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Carg27052	Cla012390	Watermelon (97103) v1	carwmB0028
Carg27052	Csa5G647310	Cucumber (Chinese Long) v2	carcuB0024
Carg27052	MELO3C022124	Melon (DHL92) v3.5.1	carmeB0026
Carg27052	ClCG08G001730	Watermelon (Charleston Gray)	carwcgB0027
Carg27052	CSPI05G30370	Wild cucumber (PI 183967)	carcpiB0025
Carg27052	Cucsa.237750	Cucumber (Gy14) v1	carcgyB0027
Carg27052	CmaCh09G012000	Cucurbita maxima (Rimu)	carcmaB0036
Carg27052	CmoCh09G012090	Cucurbita moschata (Rifu)	carcmoB0036
Carg27052	Lsi08G001750	Bottle gourd (USVL1VR-Ls)	carlsiB023
Carg27052	CsGy5G029760	Cucumber (Gy14) v2	carcgybB0024
Carg27052	MELO3C022124.2	Melon (DHL92) v3.6.1	carmedB0027
Carg27052	CsaV3_5G039470	Cucumber (Chinese Long) v3	carcucB0025
Carg27052	Cla97C08G145870	Watermelon (97103) v2	carwmbB0023
Carg27052	Bhi06G000125	Wax gourd	carwgoB0029

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Carg27052	Cucurbita pepo (Zucchini)	carcpeB0039