Carg27005 (gene) Silver-seed gourd
The following sequences are available for this feature:
Legend: polypeptideexonCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.ATGTTATTACCATCAACTCCAAGGAAGAAGCAGAATGTGCTCACTTCTCTCTTTGGTAAATCTGCCAACAAACTTTCTGCTGTTGGAGTTGTGGAGGAATTGTTTGAAGAAGGCTCTGCTATGCTTTCTGAAAGGTATGATCGGTGCTTTCTTTGGGAAACTGAAGTAATCTTGTCTTTTAATCAATGTTTTTTTCTTTCTTGTGTTGCCATTTTATCTATTTTTGTTCTTGAAGCATGAAATGATGATGTCTGAACACATTTTTCTAGGATTATTCTCATCATCTGTTATACATCAGAGTTCAATTAATCATAACAACTGTGTCTAACCGTCCAAGCCCATCGCTAGCAGATATTGTTTTTTTTTAACTTTTCCGGTCAAGCTTCCCTTCAAAGTTTTTAATACGCGTCTACTAAGGAGAGATTTTCACACTCTTATAAAGAATGTTTTGTTCTCCTCTTCAACCGACATGGGATCTCACAATCCACCCCCATTGGGGCCCAACATCCTCCCTGGCACTCATTCCTCTCTCCAACCAATGTGGGATCTCACAATCCACCCTCCTCAGGGCCCAGCTCCCTTGTTTGTTGGCACTCGTTCCTCTCTCAAATCAATGTGAGATCTCACAATCCATTCTCCTTTGGGGCCCAGCTCTGGCACACCACTTGGTGTCTGGCTCTGATACCATTTATAACAGTCCAAATCCTCCGTTAGCAAATATTGTCCTCTTTGGCCTTTCCCTTTCAGGCTTCCCTTCAAGGTTTTTAAAACCCGTCTACTAGATAGAGGTTTCCACACCCTTATAAAGAATATTTCGTTTCCTCTCCAACCGATGTGAGATCTCACGTGGGATTTACTTGTTATCCCTCATTCAACTTAACTAAGACTTCCTAGGATTATTTTCCTCAATGTTGATATAAATGGTACTGTAATTAATTTATATAAATGTTGTAATTTCCATCTGAAAGTGACTTGAAACATGTTCACCATCACTTATTCTTGAACTTTCTCCTCTTTGAATGAAAATACAGGTTAGGGAAAGATTTTCCTTCGGATCCAAACTCAGGGATCTTCAAATGTGCAGTCTGTCAAGCAGATCAACCCGCAAATGAAAATTTGTCGATGAATTCGGGGCCGTTCTTTTCACCGTCGTCAAAGCCATGGGAAGGCCCATTCCTCTGTGCAAAGTGTAGAAGAAAGAAAGACGCCATGGAAGGGAAAAGGCCAATAAAACCTACAATAACTGTTTAGTAATTTATCCCATAACATAGTGTATGTTGATAACTCTATATAGTTTTTTTTTTTTTTGTTCCCTCATCTGGCAGTG ATGTTATTACCATCAACTCCAAGGAAGAAGCAGAATGTGCTCACTTCTCTCTTTGGTAAATCTGCCAACAAACTTTCTGCTGTTGGAGTTGTGGAGGAATTGTTTGAAGAAGGCTCTGCTATGCTTTCTGAAAGGTTAGGGAAAGATTTTCCTTCGGATCCAAACTCAGGGATCTTCAAATGTGCAGTCTGTCAAGCAGATCAACCCGCAAATGAAAATTTGTCGATGAATTCGGGGCCGTTCTTTTCACCGTCGTCAAAGCCATGGGAAGGCCCATTCCTCTGTGCAAAGTGTAGAAGAAAGAAAGACGCCATGGAAGGGAAAAGGCCAATAAAACCTACAATAACTGTTTAGTAATTTATCCCATAACATAGTGTATGTTGATAACTCTATATAGTTTTTTTTTTTTTTGTTCCCTCATCTGGCAGTG ATGTTATTACCATCAACTCCAAGGAAGAAGCAGAATGTGCTCACTTCTCTCTTTGGTAAATCTGCCAACAAACTTTCTGCTGTTGGAGTTGTGGAGGAATTGTTTGAAGAAGGCTCTGCTATGCTTTCTGAAAGGTTAGGGAAAGATTTTCCTTCGGATCCAAACTCAGGGATCTTCAAATGTGCAGTCTGTCAAGCAGATCAACCCGCAAATGAAAATTTGTCGATGAATTCGGGGCCGTTCTTTTCACCGTCGTCAAAGCCATGGGAAGGCCCATTCCTCTGTGCAAAGTGTAGAAGAAAGAAAGACGCCATGGAAGGGAAAAGGCCAATAAAACCTACAATAACTGTTTAG MLLPSTPRKKQNVLTSLFGKSANKLSAVGVVEELFEEGSAMLSERLGKDFPSDPNSGIFKCAVCQADQPANENLSMNSGPFFSPSSKPWEGPFLCAKCRRKKDAMEGKRPIKPTITV
BLAST of Carg27005 vs. NCBI nr
Match: XP_022968729.1 (probable protein phosphatase 2C 5 [Cucurbita maxima] >XP_022968730.1 probable protein phosphatase 2C 5 [Cucurbita maxima]) HSP 1 Score: 239.6 bits (610), Expect = 5.4e-60 Identity = 116/117 (99.15%), Postives = 117/117 (100.00%), Query Frame = 0
BLAST of Carg27005 vs. NCBI nr
Match: XP_023516112.1 (probable protein phosphatase 2C 5 [Cucurbita pepo subsp. pepo] >XP_023516113.1 probable protein phosphatase 2C 5 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 238.8 bits (608), Expect = 9.3e-60 Identity = 115/117 (98.29%), Postives = 117/117 (100.00%), Query Frame = 0
BLAST of Carg27005 vs. NCBI nr
Match: XP_022961498.1 (probable protein phosphatase 2C 5 [Cucurbita moschata] >XP_022961499.1 probable protein phosphatase 2C 5 [Cucurbita moschata]) HSP 1 Score: 238.0 bits (606), Expect = 1.6e-59 Identity = 116/117 (99.15%), Postives = 116/117 (99.15%), Query Frame = 0
BLAST of Carg27005 vs. NCBI nr
Match: XP_004135583.1 (PREDICTED: probable protein phosphatase 2C 5 [Cucumis sativus] >XP_011659677.1 PREDICTED: probable protein phosphatase 2C 5 [Cucumis sativus] >XP_011659683.1 PREDICTED: probable protein phosphatase 2C 5 [Cucumis sativus] >KGN66026.1 hypothetical protein Csa_1G568550 [Cucumis sativus]) HSP 1 Score: 223.0 bits (567), Expect = 5.3e-55 Identity = 110/124 (88.71%), Postives = 113/124 (91.13%), Query Frame = 0
BLAST of Carg27005 vs. NCBI nr
Match: XP_008450571.1 (PREDICTED: probable protein phosphatase 2C 5 [Cucumis melo] >XP_008450573.1 PREDICTED: probable protein phosphatase 2C 5 [Cucumis melo] >XP_008450574.1 PREDICTED: probable protein phosphatase 2C 5 [Cucumis melo]) HSP 1 Score: 221.9 bits (564), Expect = 1.2e-54 Identity = 110/125 (88.00%), Postives = 113/125 (90.40%), Query Frame = 0
BLAST of Carg27005 vs. TAIR10
Match: AT1G09160.2 (Protein phosphatase 2C family protein) HSP 1 Score: 139.0 bits (349), Expect = 1.8e-33 Identity = 70/123 (56.91%), Postives = 85/123 (69.11%), Query Frame = 0
BLAST of Carg27005 vs. TAIR10
Match: AT1G68410.1 (Protein phosphatase 2C family protein) HSP 1 Score: 114.8 bits (286), Expect = 3.7e-26 Identity = 56/90 (62.22%), Postives = 65/90 (72.22%), Query Frame = 0
BLAST of Carg27005 vs. TAIR10
Match: AT1G47380.1 (Protein phosphatase 2C family protein) HSP 1 Score: 94.0 bits (232), Expect = 6.7e-20 Identity = 50/115 (43.48%), Postives = 69/115 (60.00%), Query Frame = 0
BLAST of Carg27005 vs. Swiss-Prot
Match: sp|O80492|P2C05_ARATH (Probable protein phosphatase 2C 5 OS=Arabidopsis thaliana OX=3702 GN=At1g09160 PE=2 SV=1) HSP 1 Score: 139.0 bits (349), Expect = 3.3e-32 Identity = 70/123 (56.91%), Postives = 85/123 (69.11%), Query Frame = 0
BLAST of Carg27005 vs. Swiss-Prot
Match: sp|Q0JMD4|P2C03_ORYSJ (Probable protein phosphatase 2C 3 OS=Oryza sativa subsp. japonica OX=39947 GN=Os01g0513100 PE=2 SV=2) HSP 1 Score: 117.9 bits (294), Expect = 7.8e-26 Identity = 63/117 (53.85%), Postives = 78/117 (66.67%), Query Frame = 0
BLAST of Carg27005 vs. Swiss-Prot
Match: sp|Q9M9C6|P2C15_ARATH (Probable protein phosphatase 2C 15 OS=Arabidopsis thaliana OX=3702 GN=At1g68410 PE=2 SV=1) HSP 1 Score: 114.8 bits (286), Expect = 6.6e-25 Identity = 56/90 (62.22%), Postives = 65/90 (72.22%), Query Frame = 0
BLAST of Carg27005 vs. Swiss-Prot
Match: sp|Q10MN6|P2C33_ORYSJ (Probable protein phosphatase 2C 33 OS=Oryza sativa subsp. japonica OX=39947 GN=Os03g0301700 PE=2 SV=1) HSP 1 Score: 114.8 bits (286), Expect = 6.6e-25 Identity = 61/119 (51.26%), Postives = 76/119 (63.87%), Query Frame = 0
BLAST of Carg27005 vs. Swiss-Prot
Match: sp|Q9FX08|P2C12_ARATH (Probable protein phosphatase 2C 12 OS=Arabidopsis thaliana OX=3702 GN=At1g47380 PE=2 SV=1) HSP 1 Score: 94.0 bits (232), Expect = 1.2e-18 Identity = 50/115 (43.48%), Postives = 69/115 (60.00%), Query Frame = 0
BLAST of Carg27005 vs. TrEMBL
Match: tr|A0A0A0M1G5|A0A0A0M1G5_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G568550 PE=4 SV=1) HSP 1 Score: 223.0 bits (567), Expect = 3.5e-55 Identity = 110/124 (88.71%), Postives = 113/124 (91.13%), Query Frame = 0
BLAST of Carg27005 vs. TrEMBL
Match: tr|A0A1S3BPJ4|A0A1S3BPJ4_CUCME (probable protein phosphatase 2C 5 OS=Cucumis melo OX=3656 GN=LOC103492128 PE=4 SV=1) HSP 1 Score: 221.9 bits (564), Expect = 7.7e-55 Identity = 110/125 (88.00%), Postives = 113/125 (90.40%), Query Frame = 0
BLAST of Carg27005 vs. TrEMBL
Match: tr|A0A2G3AXQ1|A0A2G3AXQ1_CAPCH (Uncharacterized protein OS=Capsicum chinense OX=80379 GN=BC332_32147 PE=4 SV=1) HSP 1 Score: 199.9 bits (507), Expect = 3.2e-48 Identity = 98/121 (80.99%), Postives = 108/121 (89.26%), Query Frame = 0
BLAST of Carg27005 vs. TrEMBL
Match: tr|A0A2G2XYA8|A0A2G2XYA8_CAPAN (Uncharacterized protein OS=Capsicum annuum OX=4072 GN=T459_33682 PE=4 SV=1) HSP 1 Score: 199.9 bits (507), Expect = 3.2e-48 Identity = 98/121 (80.99%), Postives = 108/121 (89.26%), Query Frame = 0
BLAST of Carg27005 vs. TrEMBL
Match: tr|A0A2G2V7U9|A0A2G2V7U9_CAPBA (Uncharacterized protein OS=Capsicum baccatum OX=33114 GN=CQW23_31338 PE=4 SV=1) HSP 1 Score: 199.9 bits (507), Expect = 3.2e-48 Identity = 98/121 (80.99%), Postives = 108/121 (89.26%), Query Frame = 0
The following BLAST results are available for this feature:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
The following gene(s) are orthologous to this gene: None The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene:
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