Carg27004 (gene) Silver-seed gourd
The following sequences are available for this feature:
Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.TCTTCTCTCTCTCTCTCTCTCTATCTCTCTCTCTCTCTCTCCCAATCAAATCACTGAGAGAAACTGTGGGTTCTCTCTCTCTCTCTCTAGAAATTCTAGCTGAGAATTTTCCCCGCCATCCGATCGACCTTGTTAGCAGTAGATAATTTCAAGGAAATTGAAGATTTTCTGAAATGGAGTTGCAGAACTGTCCACTGTCCGATCCCCTTTGCTCGATCTGCTACTGACATTGAATGCACCACCTGTGAGCTCTGTGGTCCCTTAATTTTCCTAATTTTTATCGTCATTTTTGGTTTTGTTTGAAATTGCTCTCAATTTGTGGTACGATAGGTTTGTAATAGAGCGAATTTGAGAGGCGTTTGGTTCTGCTTTTTCCCTAATTTTGTTTCAATTGATTCTGTGAGTTCTTGCATTTCATGCCGCTAATTGGTTTCTGAGTTGGATTCGGTGTTGTGCATTTCTTTCATTTTTTGGTTAGATTTTTCTTGTTTGTTCTTGTGTATCTGTAAATTATGCTGCTGAATCGGCTTCTCAAAGTTTAGATCAGCCAGTGGGAATTGTTCTATAGTTTGTGTTTTGGTCAAGATGTTGGTTGATACTCATTTAATTGATTTCAATGACCAGGAATTTTGGCTGCGCTGCGCTCATGCAAATGCCGAAACATAGGATGTAATGAGTCAGACAGAAGTATCAAGGATTAAGCCCCCTCTCGTTCCGCTCGCTACTTTGATCGGTCGCGAGCTGAGGAACGAGAAGGTTGAGAAACCTTTTGTGAAGTATGGACAGGCTGCTTTGGCAAAGAAAGGGGAGGACTACTTTCTGATCAAATTAGATTGCCAGCGTATTCCTGGGAACACTTCCACCACGTTTTCTGTCTTTGCGGTATCCTTTCAAACATTATTGTGCTCTTTGTTATCTAATACTTCAGATACTTCTCCTAAGACATGAATTCTGTGATTGAGAACTGGGAAAATAGTGTGATTATGAGTCTTAGAAGTGATAAATTTCTTTCTCAAATGGGATTACTGAGGATAGGATGATACTGAGATTGATTGAACCTTCTATTTGCAGATTTTTGATGGACATAATGGCATTTCAGCGGCTATTTTTGCTAAGGAACATTTATTGGGTAATGTCCTAAGTGCAATTCCTCAAGGGGTCAGTCGAGAAAAATGGCTTCAAGCCCTTCCTCGAGCACTAGTTGCTGGTTTTGTTAAAACTGACATAGAGTTTCAGCAGAAAGGTATTCTATCAGCGATTTTCTTCTTGTACTTCTTCCTGAATACTCGATGCGTTGTCCACCGTGTCCTTATGCTCCGTTTAATCTTAATTGCAGGGGAAACTTCTGGGACTACTGTTACATTTGTTGTGATTGATGGGTGGACTGTTACCGTTGCATCCGTGGGAGATTCACGGTGCATATTAGACACCCAAGGAGGTGTGGTTTCTCTATTGACAGTTGATCATAGGCTGGAGGAAAACGAGGAAGAGAGGGAACGTGTAACTGCAAGTGGTGGCGAGGTTGGGAGGCTCAATGTTTTTGGCGGGAATGAGGTATAATTGTATACATCTCCACTGTTTCTAGTCTTACATGATGACACATTTAACTATATCCCTTTTTATGACTACCGTTTGCAGGTCGGTCCTCTCCGCTGCTGGCCCGGTGGCTTATGTCTGTCTAGGTCCATTGGTGATACAGATGTAGGAGAATATATTGTCCCAATACCGCATGTTAAGCAAGTGAAGGTGACTTCTCAATCTTTCAGTAATTGTTTGACTACTAATAGAATGTACCTTGACTATTCTGCTATCTTTTTATTCTGGATTATACAGCTTTCTAATGCTGGTGGAAGGCTGATTATTGCTTCTGATGGTATTTGGGACACATTATCGTCTGATATGGCTGCAAAGTCGTGTCGAGGTTTACCTGCAGAGCTCGCTGCCAAGCTGGTTGTGAAGGTGGGTTTTGAACTTACGCCTTGAGGCTAGACTACAAAGTTTATGTCCTTGATCTTACACCTTTGGGTCATAAGGGGCATAGATCTCTAAGAAGAAGCTTAGGCCTCCATGAAAATGCTCTTTAGCTTAATTGTCTTTACTTCTTGTTAAATGACTATAAAATCAATACCAATTTTGTGAACTTCAAATAGTTTAACAAGTTAGCTTGCAAGAATGCCAACATAGGAAGTTGCTTCTTAGAATGCCATTCATGAAATAAGGTGTAGGAGTTAGTCTGTCATTTGTTTCTCATTACTACTTCTACCCACTAAGGCTTTGGAAAACTGTTAGATCCCACGTTGATCGGAGAGGTGGACAAAAGAGGTGTAGGAACCTTTTCCTAGATGAGTTTTACAATCGTAAGGTTGACGGCGAATATTTGCTATGGGTGGTTTTGAGCTGCTACAAATGGTATCAAAGCCAAATTTCGAGGACGCTAAAGCCCAAAGGGGGGGTGTGGACACCAGGCAGTGTGCCCGTTGGGCTTCGAAGGGGGGTGGATTGTAAGATCCCATATTGGTTGGGGAGAAGAACGAAGCATTCTTTATAAGGATGTAGAAACATCTCCCTAGCCTTGAGGGGAAGCCCGAAAGGGAAAACCCAAAGAGGACAACATCTGCTAGCGGTGGCTTGGGCCGTTACAAAAATATTGTTAATAGTTATGATTTTGAATCTTATTTTAATCTGTTCATATTGTAGGAGGCTTTACGGTCAAGGGGGTTGAAGGATGATACAACTTGCTTAGTTGTTGATATTATCCCATCCGAGCAACCTATGTTATTACCATCAACTCCAAGGAAGAAGCAGAATGTGCTCACTTCTCTCTTTGGTAAATCTGCCAACAAACTTTCTGCTGTTGGAGTTGTGGAGGAATTGTTTGAAGAAGGCTCTGCTATGCTTTCTGAAAGGTATGATCGGTGCTTTCTTTGGGAAACTGAAGTAATCTTGTCTTTTAATCAATGTTTTTTTCTTTCTTGTGTTGCCATTTTATCTATTTTTGTTCTTGAAGCATGAAATGATGATGTCTGAACACATTTTTCTAGGATTATTCTCATCATCTGTTATACATCAGAGTTCAATTAATCATAACAACTGTGTCTAACCGTCCAAGCCCATCGCTAGCAGATATTGTTTTTTTTTAACTTTTCCGGTCAAGCTTCCCTTCAAAGTTTTTAATACGCGTCTACTAAGGAGAGATTTTCACACTCTTATAAAGAATGTTTTGTTCTCCTCTTCAACCGACATGGGATCTCACAATCCACCCCCATTGGGGCCCAACATCCTCCCTGGCACTCATTCCTCTCTCCAACCAATGTGGGATCTCACAATCCACCCTCCTCAGGGCCCAGCTCCCTTGTTTGTTGGCACTCGTTCCTCTCTCAAATCAATGTGAGATCTCACAATCCATTCTCCTTTGGGGCCCAGCTCTGGCACACCACTTGGTGTCTGGCTCTGATACCATTTATAACAGTCCAAATCCTCCGTTAGCAAATATTGTCCTCTTTGGCCTTTCCCTTTCAGGCTTCCCTTCAAGGTTTTTAAAACCCGTCTACTAGATAGAGGTTTCCACACCCTTATAAAGAATATTTCGTTTCCTCTCCAACCGATGTGAGATCTCACGTGGGATTTACTTGTTATCCCTCATTCAACTTAACTAAGACTTCCTAGGATTATTTTCCTCAATGTTGATATAAATGGTACTGTAATTAATTTATATAAATGTTGTAATTTCCATCTGAAAGTGACTTGAAACATGTTCACCATCACTTATTCTTGAACTTTCTCCTCTTTGAATGAAAATACAGGTTAGGGAAAGATTTTCCTTCGGATCCAAACTCAGGGATCTTCAAATGTGCAGTCTGTCAAGCAGATCAACCCGCAAATGAAAATTTGTCGATGAATTCGGGGCCGTTCTTTTCACCGTCGTCAAAGCCATGGGAAGGCCCATTCCTCTGTGCAAAGTGTAGAAGAAAGAAAGACGCCATGGAAGGGAAAAGGCCAATAAAACCTACAATAACTGTTTAGTAATTTATCCCATAACATAGTGTATGTTGATAACTCTATATAGTTTTTTTTTTTTTTGTTCCCTCATCTGGCAGTG TCTTCTCTCTCTCTCTCTCTCTATCTCTCTCTCTCTCTCTCCCAATCAAATCACTGAGAGAAACTGTGGGTTCTCTCTCTCTCTCTCTAGAAATTCTAGCTGAGAATTTTCCCCGCCATCCGATCGACCTTGTTAGCAGTAGATAATTTCAAGGAAATTGAAGATTTTCTGAAATGGAGTTGCAGAACTGTCCACTGTCCGATCCCCTTTGCTCGATCTGCTACTGACATTGAATGCACCACCTGAATTTTGGCTGCGCTGCGCTCATGCAAATGCCGAAACATAGGATGTAATGAGTCAGACAGAAGTATCAAGGATTAAGCCCCCTCTCGTTCCGCTCGCTACTTTGATCGGTCGCGAGCTGAGGAACGAGAAGGTTGAGAAACCTTTTGTGAAGTATGGACAGGCTGCTTTGGCAAAGAAAGGGGAGGACTACTTTCTGATCAAATTAGATTGCCAGCGTATTCCTGGGAACACTTCCACCACGTTTTCTGTCTTTGCGATTTTTGATGGACATAATGGCATTTCAGCGGCTATTTTTGCTAAGGAACATTTATTGGGTAATGTCCTAAGTGCAATTCCTCAAGGGGTCAGTCGAGAAAAATGGCTTCAAGCCCTTCCTCGAGCACTAGTTGCTGGTTTTGTTAAAACTGACATAGAGTTTCAGCAGAAAGGGGAAACTTCTGGGACTACTGTTACATTTGTTGTGATTGATGGGTGGACTGTTACCGTTGCATCCGTGGGAGATTCACGGTGCATATTAGACACCCAAGGAGGTGTGGTTTCTCTATTGACAGTTGATCATAGGCTGGAGGAAAACGAGGAAGAGAGGGAACGTGTAACTGCAAGTGGTGGCGAGGTTGGGAGGCTCAATGTTTTTGGCGGGAATGAGGTCGGTCCTCTCCGCTGCTGGCCCGGTGGCTTATGTCTGTCTAGGTCCATTGGTGATACAGATGTAGGAGAATATATTGTCCCAATACCGCATGTTAAGCAAGTGAAGCTTTCTAATGCTGGTGGAAGGCTGATTATTGCTTCTGATGGTATTTGGGACACATTATCGTCTGATATGGCTGCAAAGTCGTGTCGAGGTTTACCTGCAGAGCTCGCTGCCAAGCTGGTTGTGAAGTGTAGGAGGCTTTACGGTCAAGGGGGTTGAAGGATGATACAACTTGCTTAGTTGTTGATATTATCCCATCCGAGCAACCTATGTTATTACCATCAACTCCAAGGAAGAAGCAGAATGTGCTCACTTCTCTCTTTGGTAAATCTGCCAACAAACTTTCTGCTGTTGGAGTTGTGGAGGAATTGTTTGAAGAAGGCTCTGCTATGCTTTCTGAAAGGTTAGGGAAAGATTTTCCTTCGGATCCAAACTCAGGGATCTTCAAATGTGCAGTCTGTCAAGCAGATCAACCCGCAAATGAAAATTTGTCGATGAATTCGGGGCCGTTCTTTTCACCGTCGTCAAAGCCATGGGAAGGCCCATTCCTCTGTGCAAAGTGTAGAAGAAAGAAAGACGCCATGGAAGGGAAAAGGCCAATAAAACCTACAATAACTGTTTAGTAATTTATCCCATAACATAGTGTATGTTGATAACTCTATATAGTTTTTTTTTTTTTTGTTCCCTCATCTGGCAGTG ATGAGTCAGACAGAAGTATCAAGGATTAAGCCCCCTCTCGTTCCGCTCGCTACTTTGATCGGTCGCGAGCTGAGGAACGAGAAGGTTGAGAAACCTTTTGTGAAGTATGGACAGGCTGCTTTGGCAAAGAAAGGGGAGGACTACTTTCTGATCAAATTAGATTGCCAGCGTATTCCTGGGAACACTTCCACCACGTTTTCTGTCTTTGCGATTTTTGATGGACATAATGGCATTTCAGCGGCTATTTTTGCTAAGGAACATTTATTGGGTAATGTCCTAAGTGCAATTCCTCAAGGGGTCAGTCGAGAAAAATGGCTTCAAGCCCTTCCTCGAGCACTAGTTGCTGGTTTTGTTAAAACTGACATAGAGTTTCAGCAGAAAGGGGAAACTTCTGGGACTACTGTTACATTTGTTGTGATTGATGGGTGGACTGTTACCGTTGCATCCGTGGGAGATTCACGGTGCATATTAGACACCCAAGGAGGTGTGGTTTCTCTATTGACAGTTGATCATAGGCTGGAGGAAAACGAGGAAGAGAGGGAACGTGTAACTGCAAGTGGTGGCGAGGTTGGGAGGCTCAATGTTTTTGGCGGGAATGAGGTCGGTCCTCTCCGCTGCTGGCCCGGTGGCTTATGTCTGTCTAGGTCCATTGGTGATACAGATGTAGGAGAATATATTGTCCCAATACCGCATGTTAAGCAAGTGAAGCTTTCTAATGCTGGTGGAAGGCTGATTATTGCTTCTGATGGTATTTGGGACACATTATCGTCTGATATGGCTGCAAAGTCGTGTCGAGGTTTACCTGCAGAGCTCGCTGCCAAGCTGGTTGTGAAGTGTAGGAGGCTTTACGGTCAAGGGGGTTGA MSQTEVSRIKPPLVPLATLIGRELRNEKVEKPFVKYGQAALAKKGEDYFLIKLDCQRIPGNTSTTFSVFAIFDGHNGISAAIFAKEHLLGNVLSAIPQGVSREKWLQALPRALVAGFVKTDIEFQQKGETSGTTVTFVVIDGWTVTVASVGDSRCILDTQGGVVSLLTVDHRLEENEEERERVTASGGEVGRLNVFGGNEVGPLRCWPGGLCLSRSIGDTDVGEYIVPIPHVKQVKLSNAGGRLIIASDGIWDTLSSDMAAKSCRGLPAELAAKLVVKCRRLYGQGG
BLAST of Carg27004 vs. NCBI nr
Match: XP_022961498.1 (probable protein phosphatase 2C 5 [Cucurbita moschata] >XP_022961499.1 probable protein phosphatase 2C 5 [Cucurbita moschata]) HSP 1 Score: 555.1 bits (1429), Expect = 1.4e-154 Identity = 278/278 (100.00%), Postives = 278/278 (100.00%), Query Frame = 0
BLAST of Carg27004 vs. NCBI nr
Match: XP_023516112.1 (probable protein phosphatase 2C 5 [Cucurbita pepo subsp. pepo] >XP_023516113.1 probable protein phosphatase 2C 5 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 551.2 bits (1419), Expect = 2.1e-153 Identity = 276/278 (99.28%), Postives = 276/278 (99.28%), Query Frame = 0
BLAST of Carg27004 vs. NCBI nr
Match: XP_022968729.1 (probable protein phosphatase 2C 5 [Cucurbita maxima] >XP_022968730.1 probable protein phosphatase 2C 5 [Cucurbita maxima]) HSP 1 Score: 550.1 bits (1416), Expect = 4.6e-153 Identity = 276/278 (99.28%), Postives = 276/278 (99.28%), Query Frame = 0
BLAST of Carg27004 vs. NCBI nr
Match: XP_022135972.1 (probable protein phosphatase 2C 5 [Momordica charantia] >XP_022135973.1 probable protein phosphatase 2C 5 [Momordica charantia] >XP_022135974.1 probable protein phosphatase 2C 5 [Momordica charantia] >XP_022135975.1 probable protein phosphatase 2C 5 [Momordica charantia] >XP_022135977.1 probable protein phosphatase 2C 5 [Momordica charantia] >XP_022135978.1 probable protein phosphatase 2C 5 [Momordica charantia]) HSP 1 Score: 544.3 bits (1401), Expect = 2.5e-151 Identity = 272/278 (97.84%), Postives = 274/278 (98.56%), Query Frame = 0
BLAST of Carg27004 vs. NCBI nr
Match: XP_022931629.1 (probable protein phosphatase 2C 5 [Cucurbita moschata] >XP_022931630.1 probable protein phosphatase 2C 5 [Cucurbita moschata] >XP_023530100.1 probable protein phosphatase 2C 5 [Cucurbita pepo subsp. pepo] >XP_023530101.1 probable protein phosphatase 2C 5 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 538.5 bits (1386), Expect = 1.4e-149 Identity = 270/278 (97.12%), Postives = 272/278 (97.84%), Query Frame = 0
BLAST of Carg27004 vs. TAIR10
Match: AT1G09160.2 (Protein phosphatase 2C family protein) HSP 1 Score: 490.7 bits (1262), Expect = 6.0e-139 Identity = 241/278 (86.69%), Postives = 261/278 (93.88%), Query Frame = 0
BLAST of Carg27004 vs. TAIR10
Match: AT1G68410.1 (Protein phosphatase 2C family protein) HSP 1 Score: 414.5 bits (1064), Expect = 5.5e-116 Identity = 198/266 (74.44%), Postives = 233/266 (87.59%), Query Frame = 0
BLAST of Carg27004 vs. TAIR10
Match: AT1G47380.1 (Protein phosphatase 2C family protein) HSP 1 Score: 370.9 bits (951), Expect = 6.9e-103 Identity = 175/265 (66.04%), Postives = 219/265 (82.64%), Query Frame = 0
BLAST of Carg27004 vs. TAIR10
Match: AT1G07160.1 (Protein phosphatase 2C family protein) HSP 1 Score: 109.4 bits (272), Expect = 3.8e-24 Identity = 74/224 (33.04%), Postives = 120/224 (53.57%), Query Frame = 0
BLAST of Carg27004 vs. TAIR10
Match: AT5G10740.1 (Protein phosphatase 2C family protein) HSP 1 Score: 104.0 bits (258), Expect = 1.6e-22 Identity = 76/251 (30.28%), Postives = 129/251 (51.39%), Query Frame = 0
BLAST of Carg27004 vs. Swiss-Prot
Match: sp|O80492|P2C05_ARATH (Probable protein phosphatase 2C 5 OS=Arabidopsis thaliana OX=3702 GN=At1g09160 PE=2 SV=1) HSP 1 Score: 490.7 bits (1262), Expect = 1.1e-137 Identity = 241/278 (86.69%), Postives = 261/278 (93.88%), Query Frame = 0
BLAST of Carg27004 vs. Swiss-Prot
Match: sp|Q10MN6|P2C33_ORYSJ (Probable protein phosphatase 2C 33 OS=Oryza sativa subsp. japonica OX=39947 GN=Os03g0301700 PE=2 SV=1) HSP 1 Score: 445.7 bits (1145), Expect = 4.0e-124 Identity = 214/267 (80.15%), Postives = 241/267 (90.26%), Query Frame = 0
BLAST of Carg27004 vs. Swiss-Prot
Match: sp|Q9M9C6|P2C15_ARATH (Probable protein phosphatase 2C 15 OS=Arabidopsis thaliana OX=3702 GN=At1g68410 PE=2 SV=1) HSP 1 Score: 414.5 bits (1064), Expect = 9.9e-115 Identity = 198/266 (74.44%), Postives = 233/266 (87.59%), Query Frame = 0
BLAST of Carg27004 vs. Swiss-Prot
Match: sp|Q9FX08|P2C12_ARATH (Probable protein phosphatase 2C 12 OS=Arabidopsis thaliana OX=3702 GN=At1g47380 PE=2 SV=1) HSP 1 Score: 370.9 bits (951), Expect = 1.3e-101 Identity = 175/265 (66.04%), Postives = 219/265 (82.64%), Query Frame = 0
BLAST of Carg27004 vs. Swiss-Prot
Match: sp|Q0JMD4|P2C03_ORYSJ (Probable protein phosphatase 2C 3 OS=Oryza sativa subsp. japonica OX=39947 GN=Os01g0513100 PE=2 SV=2) HSP 1 Score: 362.5 bits (929), Expect = 4.5e-99 Identity = 175/214 (81.78%), Postives = 196/214 (91.59%), Query Frame = 0
BLAST of Carg27004 vs. TrEMBL
Match: tr|A0A1S3BPJ4|A0A1S3BPJ4_CUCME (probable protein phosphatase 2C 5 OS=Cucumis melo OX=3656 GN=LOC103492128 PE=4 SV=1) HSP 1 Score: 537.3 bits (1383), Expect = 2.0e-149 Identity = 270/278 (97.12%), Postives = 272/278 (97.84%), Query Frame = 0
BLAST of Carg27004 vs. TrEMBL
Match: tr|A0A0A0M1G5|A0A0A0M1G5_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G568550 PE=4 SV=1) HSP 1 Score: 535.8 bits (1379), Expect = 5.9e-149 Identity = 269/278 (96.76%), Postives = 271/278 (97.48%), Query Frame = 0
BLAST of Carg27004 vs. TrEMBL
Match: tr|A0A2I4FZW0|A0A2I4FZW0_9ROSI (probable protein phosphatase 2C 5 OS=Juglans regia OX=51240 GN=LOC109003487 PE=4 SV=1) HSP 1 Score: 528.1 bits (1359), Expect = 1.2e-146 Identity = 262/278 (94.24%), Postives = 271/278 (97.48%), Query Frame = 0
BLAST of Carg27004 vs. TrEMBL
Match: tr|A0A2I4EF75|A0A2I4EF75_9ROSI (probable protein phosphatase 2C 5 isoform X1 OS=Juglans regia OX=51240 GN=LOC108989055 PE=4 SV=1) HSP 1 Score: 526.2 bits (1354), Expect = 4.7e-146 Identity = 261/278 (93.88%), Postives = 270/278 (97.12%), Query Frame = 0
BLAST of Carg27004 vs. TrEMBL
Match: tr|A0A2P5EVH4|A0A2P5EVH4_9ROSA (Protein phosphatase OS=Trema orientalis OX=63057 GN=TorRG33x02_146820 PE=4 SV=1) HSP 1 Score: 525.8 bits (1353), Expect = 6.2e-146 Identity = 263/278 (94.60%), Postives = 270/278 (97.12%), Query Frame = 0
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene: None |