Carg26889 (gene) Silver-seed gourd
The following sequences are available for this feature:
Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below.ATGAAACAAAAACTTTACCAAAAGGGCCTCAAAGTGTTTTTTTTTAATTGTTTTCTTTACTTTTCTTTTTCTGTTCTTGAGTGTGTACTAGAGGCCAGAATTGCTAATGCTTAATATGAATTTCTTGCGAGACATAGGCTTCCTTCAGTTACTGACTTCCACCTTTTATTGTCGATTTCATTCAATGATTCAAGTTGATTGTTGTCCCGGCTGTAAGAGTGATTAAGCAACTCCTCCTGCTATGTTTCTTCTTCATTACTATTATCATGCTTCCAAAATGACTCAACAATTGCATTATATCCGGTTCTTGGGATATTGATCTGAAGAATTTTACTAATTTGCTTGATCTGTTTTTATCCATCATACTATACCAGAGTTTTCTTTTTACTGTTACAGGTGGTAAAATGCCTCCATGTGGATGACGTTTATCACTTTCATAATATAATTGATATGCTTGTTGGATGCGGCTACAAGAAGGGAACGACATTGTTTGGTTTTGGTTATGATTTCCGGCAGAGTAATAGGTAGATCATTCTTCATCTCTTGTTTTAGTATCAAAATTTCATGAATGATTTAATTGCTAGTAGCCGAAAGTGTATGCATGAATCAACATTGATGTAGGAGCATTGGTTGTTGGTGACAGAATTGGCAAGGCTATGGATGGTCTTAAAGCGAAGCTGGAAACTGCTAGTAAAGCTTCTGGTGGTAGAAAAGTGAACATAATATCTCATTCTATGGGTGGGCTGCTACTTTCGTGTTTCATGTCACTCCATAATGATGTACGCACGTATTCTCTTGACTAGTTGAAACTTGCATCTATGAGCACGAACTTGTTTTATGGATTCGGCATGATGTGCTTATTGTTAATTGGCAGATTTTTTCCAAATACGTAAATAAGTGGATTGCTATAGCTTGCCCTTTCCAAGGTAATTCAAACCTATTGCTTATTTCCATTCGTCAATAGCTGTAATCTGAATCTAGTCCAATCATTGAAACTGTTCCTTATGTGAACAAATTCCTTTGATCAAGTTGTCCTTCTAACTTAGTTTCTCATTATTATTTATTTGATAGTAAACATTAGGAAAAATTGAATGTATGACCGATCTAACACAAAATAATAGCAAATATAGCACAAGCTCAAAATATTTGCCAATATGACACAACTGTAAGCCATATCAGTCTGGACTGAGGTCTATCACTGATAAACCTATCACTGACTGATATCGATCTATGATTGAGGTCTATCACTGATAAACCTCTCAATGATTGAGGTATGTCAATGATTGTTTGCATGCTTGTTTGCTATTACGTTATTACTAATATATTACTATCATAGAATATAAATGTAGTGGCTTCTTCTTGTCGCACTCTATATCTTTGTTTTTGTTCGTTTTGTCTTTTTCTTTCAATATCCTTTAGGCTAGTGAATATTGTGTTCCATGGAGGTGATGAGCTTCTGCATCCATAACATTAACTTTTGTATTTGGCTTGAAATCGACATGAGTTTGTTGAAGACATGAAGTACAAGTTGAAGATTCCCTTCTGTCTTTCATCTGTTTTGGATAATTCTCTAATTGATCCATTGCAAAATCCTGTACACTTATTTTTTCTTTGTAAGCAAGTCAAAGATGTTTCTGAGACTATCCGTTTGGCCAAGTATAGGATTCCCCAAGAAAGAAAATTCAAGTATCAGTTGGAAATTCGAATGTATAGTTCTTTGGGAAATGATTAGAGATTTTCTCTTAAAGATTGAGAAAAAGCACTCATCTTTCACTTTTCCGAATCATGTCAGGGAAAAATATTGTAGTCGGAGCTAGTTAAAGATAATCAACTTCATAAAAGAAAAATAAAATGCTTGTACATTTTGAGTGAGGAAAGAAAAAGAAGTGGAAATGAACTTCAATTTTGTCTCGGTGGTTTCTAGATTGCTAGCTCACAATTCTTGGAAGGACATTCATGATTGGTACATGATCATTAGAAGCATACAATCCTTGCTCAACCATTTCTTCCATCTAAATCCTTTTAGGGTGGACAAGGCGTTCCTCTGTTGCACGAAAAAAGTGGCAAGCTCTCGGTTGTAAATAGAACCATGGTAGATGAGGAACACTTGAACAACCTAGTGGTTCCTTCATATGGAGGATGA ATGAAACAAAAACTTTACCAAAAGGGCCTCAAAGTGGTAAAATGCCTCCATGTGGATGACGTTTATCACTTTCATAATATAATTGATATGCTTGTTGGATGCGGCTACAAGAAGGGAACGACATTGTTTGGTTTTGGTTATGATTTCCGGCAGAGAGCATTGGTTGTTGGTGACAGAATTGGCAAGGCTATGGATGGTCTTAAAGCGAAGCTGGAAACTGCTAGTAAAGCTTCTGGTGGTAGAAAAGGTGGACAAGGCGTTCCTCTGTTGCACGAAAAAAGTGGCAAGCTCTCGGTTGTAAATAGAACCATGGTAGATGAGGAACACTTGAACAACCTAGTGGTTCCTTCATATGGAGGATGA ATGAAACAAAAACTTTACCAAAAGGGCCTCAAAGTGGTAAAATGCCTCCATGTGGATGACGTTTATCACTTTCATAATATAATTGATATGCTTGTTGGATGCGGCTACAAGAAGGGAACGACATTGTTTGGTTTTGGTTATGATTTCCGGCAGAGAGCATTGGTTGTTGGTGACAGAATTGGCAAGGCTATGGATGGTCTTAAAGCGAAGCTGGAAACTGCTAGTAAAGCTTCTGGTGGTAGAAAAGGTGGACAAGGCGTTCCTCTGTTGCACGAAAAAAGTGGCAAGCTCTCGGTTGTAAATAGAACCATGGTAGATGAGGAACACTTGAACAACCTAGTGGTTCCTTCATATGGAGGATGA MKQKLYQKGLKVVKCLHVDDVYHFHNIIDMLVGCGYKKGTTLFGFGYDFRQRALVVGDRIGKAMDGLKAKLETASKASGGRKGGQGVPLLHEKSGKLSVVNRTMVDEEHLNNLVVPSYGG
BLAST of Carg26889 vs. NCBI nr
Match: XP_022933151.1 (phospholipase A(1) LCAT3 [Cucurbita moschata]) HSP 1 Score: 129.8 bits (325), Expect = 6.2e-27 Identity = 64/71 (90.14%), Postives = 65/71 (91.55%), Query Frame = 0
BLAST of Carg26889 vs. NCBI nr
Match: XP_022973913.1 (phospholipase A(1) LCAT3 [Cucurbita maxima]) HSP 1 Score: 129.8 bits (325), Expect = 6.2e-27 Identity = 64/71 (90.14%), Postives = 65/71 (91.55%), Query Frame = 0
BLAST of Carg26889 vs. NCBI nr
Match: XP_023546771.1 (phospholipase A(1) LCAT3 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 129.8 bits (325), Expect = 6.2e-27 Identity = 64/71 (90.14%), Postives = 65/71 (91.55%), Query Frame = 0
BLAST of Carg26889 vs. NCBI nr
Match: XP_004138893.1 (PREDICTED: phospholipase A(1) LCAT3 [Cucumis sativus] >KGN61338.1 hypothetical protein Csa_2G093800 [Cucumis sativus]) HSP 1 Score: 125.6 bits (314), Expect = 1.2e-25 Identity = 61/71 (85.92%), Postives = 65/71 (91.55%), Query Frame = 0
BLAST of Carg26889 vs. NCBI nr
Match: XP_008441766.1 (PREDICTED: phospholipase A(1) LCAT3 [Cucumis melo]) HSP 1 Score: 122.5 bits (306), Expect = 9.9e-25 Identity = 60/71 (84.51%), Postives = 64/71 (90.14%), Query Frame = 0
BLAST of Carg26889 vs. TAIR10
Match: AT3G03310.1 (lecithin:cholesterol acyltransferase 3) HSP 1 Score: 93.2 bits (230), Expect = 1.2e-19 Identity = 50/87 (57.47%), Postives = 60/87 (68.97%), Query Frame = 0
BLAST of Carg26889 vs. TAIR10
Match: AT4G19860.1 (alpha/beta-Hydrolases superfamily protein) HSP 1 Score: 62.8 bits (151), Expect = 1.7e-10 Identity = 30/64 (46.88%), Postives = 43/64 (67.19%), Query Frame = 0
BLAST of Carg26889 vs. Swiss-Prot
Match: sp|Q93V61|LCAT3_ARATH (Phospholipase A(1) LCAT3 OS=Arabidopsis thaliana OX=3702 GN=LCAT3 PE=1 SV=1) HSP 1 Score: 93.2 bits (230), Expect = 2.1e-18 Identity = 50/87 (57.47%), Postives = 60/87 (68.97%), Query Frame = 0
BLAST of Carg26889 vs. Swiss-Prot
Match: sp|Q71N54|LCAT4_ARATH (Lecithin-cholesterol acyltransferase-like 4 OS=Arabidopsis thaliana OX=3702 GN=LCAT4 PE=1 SV=1) HSP 1 Score: 62.8 bits (151), Expect = 3.0e-09 Identity = 30/64 (46.88%), Postives = 43/64 (67.19%), Query Frame = 0
BLAST of Carg26889 vs. TrEMBL
Match: tr|A0A0A0LHR5|A0A0A0LHR5_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G093800 PE=4 SV=1) HSP 1 Score: 125.6 bits (314), Expect = 7.7e-26 Identity = 61/71 (85.92%), Postives = 65/71 (91.55%), Query Frame = 0
BLAST of Carg26889 vs. TrEMBL
Match: tr|A0A1S3B3Q4|A0A1S3B3Q4_CUCME (phospholipase A(1) LCAT3 OS=Cucumis melo OX=3656 GN=LOC103485824 PE=4 SV=1) HSP 1 Score: 122.5 bits (306), Expect = 6.6e-25 Identity = 60/71 (84.51%), Postives = 64/71 (90.14%), Query Frame = 0
BLAST of Carg26889 vs. TrEMBL
Match: tr|A0A2P5EUA2|A0A2P5EUA2_9ROSA (Lecithin:cholesterol/phospholipid:diacylglycerol acyltransferase OS=Trema orientalis OX=63057 GN=TorRG33x02_149820 PE=4 SV=1) HSP 1 Score: 110.2 bits (274), Expect = 3.4e-21 Identity = 54/71 (76.06%), Postives = 60/71 (84.51%), Query Frame = 0
BLAST of Carg26889 vs. TrEMBL
Match: tr|A0A2P5CDM4|A0A2P5CDM4_PARAD (Lecithin:cholesterol/phospholipid:diacylglycerol acyltransferase OS=Parasponia andersonii OX=3476 GN=PanWU01x14_162260 PE=4 SV=1) HSP 1 Score: 110.2 bits (274), Expect = 3.4e-21 Identity = 54/71 (76.06%), Postives = 60/71 (84.51%), Query Frame = 0
BLAST of Carg26889 vs. TrEMBL
Match: tr|A0A251SAM8|A0A251SAM8_HELAN (Putative lecithin:cholesterol acyltransferase 3 OS=Helianthus annuus OX=4232 GN=ATLCAT3 PE=4 SV=1) HSP 1 Score: 109.8 bits (273), Expect = 4.4e-21 Identity = 57/87 (65.52%), Postives = 65/87 (74.71%), Query Frame = 0
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene:
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