Carg26888 (gene) Silver-seed gourd | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Carg26888
Type	gene
Organism	Cucurbita argyrosperma (Silver-seed gourd)
Description	phospholipase A(1) LCAT3
Location	Cucurbita_argyrosperma_scaffold_247 : 90635 .. 93648 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexonthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAAAGCCAATTTTTCGTATCTAGATGGACATTTCACCAGCTGGTAACTTTCCTCCTGTCAGTGTCTAGGTGGTTTAGTTTACACCTAAAATGATTGCAAGGGTATTTTTTTTAATCATTATCGACAAGTTGGATACCTTATCAACCATTTTTTCATGCATATCTTTGTCTCATTAATGATATTGTGCTTTTGTTCTCAATGATACCATTTCTTTGTGTATGATATGTCATAGGTCTACTAATGATATTTACGTGCAGTTGGTTGAATGTCCTTCAATTTATGAGATGCTGGGGAATCTAGGATTCAATTGGCATGCACAACCACAGATCCAAGTTTGGCAAAAGAGTTCTGTTGATGGAAAAACTTCTGTTGAATTGAAATCATATGGCCCAACTGATAGCATTGCTTTATTCGAAGAAGCATTAAGAAATAACCAGGTACGACACTTCACGTTGATTCTGTTAAAAAGTCATCTGGCACAAGCTAATTTTAATTTCATTATTGCAGATAAAATTTCATGGAAAGACTATTCCTCTGCCCTTTAACTTGGATATTCTCAAATGGGCTACTGGTACTCGCCAAGTAATTGATAATGCAAGGCTACCAGATGGAATCTCCTTCTATAATATTTATGGGACATCGTTCGATACGCCTTTTGATGTGTGGTATGTTAATGAACTTTGCATTATTATGTGTTAGATGCATATTTAGTTTTCAGTAAAAAGACTGTCTTTCATATCATTGTAATGATAAATTATGAATGGGTCAGTGTAGTAGTCCAGAGGTATGGCTGTTTTCTCATTGCTTTGTATAAATTTGATATCAATTCATTGATGTTAATGCCTCTGTTTCAAATTAAATAATGAACATATGGTATTAACTATGATGCAGCTATGGTTCCGAGTCGTTGCCGATTGAGGACTTGTCTGAAATCTGCAAAACTTTGGTGAGTGATTCAATTTCCTTTTGCTTTTATGTGTTAGGCCTTTCTTCTTCTACTTAAGATAGACATTGTTCGGGATTTCAACCTTTTTTTTTTTTCCTGATTGGATTGTTTGTTGGGTTCACTGTTCATGGTTTTAAGATGGTCTATTTGTTTGGACAATCGCATCATCTTTTAGTCTCTTGTTTGAATATGCTGTGTGAGATCCCAGATCGATTGGGGAGGAGAACGAAACACCCTTATAAAGGTGTGGAAACCTCTCCCTAGTAGACGCGTTTTAAAAACTTTGATGGGAAGTCCGAAAGGAAAAGTCCAAAGAGGACAATATCTCCTAGCGGTGGGCCTGGGCCGTTCCATACACAATGTTAAAAGACAAGTCATTGATGGCTAAAGTTCCTGACACATGCTGAACAACCTTACTGTCTAAATTACTACTATTCAACATAATGGGGATGTCTTTCTTCATTGGTCCCGAACTGTTTGGATCGATTTCTTAAGTATCATACCAAATCCTATCAATAGAATAGCTTTCTCGAGAAATACGAGACATAAATCCTTTTTAGCCCAAATTTTTGTCAGTGGCGATCTCCAATTACAAAGAGACTTTCGACACCCAAACATCATCTGTCCTGAGCTTACTAGCCCTTCAACACCAAACATGGAAAATTCTTCTTAAAGAGGAGATATTACTAAATGACCTTTATCTTTATTTATTTTTTGTTTTTAATTTCCCGTCTTTTCTGGCTTTGATTAATTTATCAACAGTTTGGATGTTGAAGTAAATACTGTTTTTGATGCATTCCCATTTTCACTGATCAACCGAATAACAATTTTTTAAATGTGATAACAATGAGGTGAATGGGGACCTCTGAGTAATATGATATTCTTTATTGTGTATAAGAACTAACAATATATGACTGACTGCTTATCACCCTTGTTTCTCTTCCTCTCGGCAGCCTCAGTATTCTTATGTGAACGGAGACGGTACAGTTCCCAGTGAATCAGCCAAGGTATGCTATTTCACCAAATTTAGTTCATGCATTCAAAAAACATGTTTGTTGTCGTTGTGTTCGTGTGCGCGTGTGTTTTATTTACATAACGTGCATCTTTCCTTTGGAAGGCGGATGGTTTTGAAGCAACTGAGAGAGTAGGAGTCGCAGCGAGTCATCGAGGACTTTTGAAGGACGAAACAGTATTGCAGCTTATCCAGAAATGGTTGGGAATTGATGAGAAGGTTAGTAAACACCCAACAACTTCCAAAGTGTTCGATGCTTCTCTGAAGTAGAAATGTGGCTAGTGTAAGTTTAAAAATAAGGCATAAATATTGTATTGCTGAAGCAAATCCAAGTACAGTCATTTGTATTCTAGTATATCAGTAGAATCATAATGACGAGATTGCCCAAATTAAGGATAGAAACACATACATACATGACTCGCACACATACATTATCAAAATCATGGCTTTACAAACCTAAAAAAAATCATTCACATGACTAGCGTGCTTTACGTTTTAAAATGACTTGGGACTTTGTTTTCAGTAACTTATCATACCTATAAGTTGTAGATTGAAGCTTGCAATTGGCTTCCAACTTCGGGTAACTTTGAATTTCAATTGTCTTATTTGCAACTATACACGAGAATATCGTAAGTTAGGAGCTATACTACAACGCCTACCTTGAGTCCAAAAAGGCTTATTAGAGTATTACCTAATGAGTGAGTAGAGTTTGAGATCTAAATCACCTAGACGTCCTAAGAATTTAGTAAGCCTCTACGGTATCCAAAGAAATTAAAGAAAGCTTACGAGATTGCTAACAAGGTCAACGGTATCACCAGAGTATGACAGCCTTCAATTTTCTCTAGTACCTTAATAGCACTATTTGATGACCTAAGTTGAACCAATAGTGTCCCTGCCAAGTGTTAGTATCTAGAAACCAGTATTGTCAAACTTGATTAAGGTTAAATAAGATGATATGTAGTGACGACATGGAGTTACTATTGTTGTGTAGAGATGGATCGATAGCCTAGGTTGTGATACCTTAAACTCGTCTTGAGAGTGATCAAAGGGACTG

mRNA sequence

ATGAAAGCCAATTTTTCGTATCTAGATGGACATTTCACCAGCTGGTCTACTAATGATATTTACGTGCAGTTGGTTGAATGTCCTTCAATTTATGAGATGCTGGGGAATCTAGGATTCAATTGGCATGCACAACCACAGATCCAAGTTTGGCAAAAGAGTTCTGTTGATGGAAAAACTTCTGTTGAATTGAAATCATATGGCCCAACTGATAGCATTGCTTTATTCGAAGAAGCATTAAGAAATAACCAGATAAAATTTCATGGAAAGACTATTCCTCTGCCCTTTAACTTGGATATTCTCAAATGGGCTACTGGTACTCGCCAAGTAATTGATAATGCAAGGCTACCAGATGGAATCTCCTTCTATAATATTTATGGGACATCGTTCGATACGCCTTTTGATGTGTGCTATGGTTCCGAGTCGTTGCCGATTGAGGACTTGTCTGAAATCTGCAAAACTTTGCCTCAGTATTCTTATGTGAACGGAGACGGTACAGTTCCCAGTGAATCAGCCAAGGCGGATGGTTTTGAAGCAACTGAGAGAGTAGGAGTCGCAGCGAGTCATCGAGGACTTTTGAAGGACGAAACAGTATTGCAGCTTATCCAGAAATGGTTGGGAATTGATGAGAAGGTTAGTAAACACCCAACAACTTCCAAAGTGTTCGATGCTTCTCTGAAGTAGAAATGTGGCTAGTGTAAGTTTAAAAATAAGGCATAAATATTGTATTGCTGAAGCAAATCCAAGTACAGTCATTTGTATTCTAGTATATCAGTAGAATCATAATGACGAGATTGCCCAAATTAAGGATAGAAACACATACATACATGACTCGCACACATACATTATCAAAATCATGGCTTTACAAACCTAAAAAAAATCATTCACATGACTAGCGTGCTTTACGTTTTAAAATGACTTGGGACTTTGTTTTCAGTAACTTATCATACCTATAAGTTGTAGATTGAAGCTTGCAATTGGCTTCCAACTTCGGGTAACTTTGAATTTCAATTGTCTTATTTGCAACTATACACGAGAATATCGTAAGTTAGGAGCTATACTACAACGCCTACCTTGAGTCCAAAAAGGCTTATTAGAGTATTACCTAATGAGTGAGTAGAGTTTGAGATCTAAATCACCTAGACGTCCTAAGAATTTAGTAAGCCTCTACGGTATCCAAAGAAATTAAAGAAAGCTTACGAGATTGCTAACAAGGTCAACGGTATCACCAGAGTATGACAGCCTTCAATTTTCTCTAGTACCTTAATAGCACTATTTGATGACCTAAGTTGAACCAATAGTGTCCCTGCCAAGTGTTAGTATCTAGAAACCAGTATTGTCAAACTTGATTAAGGTTAAATAAGATGATATGTAGTGACGACATGGAGTTACTATTGTTGTGTAGAGATGGATCGATAGCCTAGGTTGTGATACCTTAAACTCGTCTTGAGAGTGATCAAAGGGACTG

Coding sequence (CDS)

ATGAAAGCCAATTTTTCGTATCTAGATGGACATTTCACCAGCTGGTCTACTAATGATATTTACGTGCAGTTGGTTGAATGTCCTTCAATTTATGAGATGCTGGGGAATCTAGGATTCAATTGGCATGCACAACCACAGATCCAAGTTTGGCAAAAGAGTTCTGTTGATGGAAAAACTTCTGTTGAATTGAAATCATATGGCCCAACTGATAGCATTGCTTTATTCGAAGAAGCATTAAGAAATAACCAGATAAAATTTCATGGAAAGACTATTCCTCTGCCCTTTAACTTGGATATTCTCAAATGGGCTACTGGTACTCGCCAAGTAATTGATAATGCAAGGCTACCAGATGGAATCTCCTTCTATAATATTTATGGGACATCGTTCGATACGCCTTTTGATGTGTGCTATGGTTCCGAGTCGTTGCCGATTGAGGACTTGTCTGAAATCTGCAAAACTTTGCCTCAGTATTCTTATGTGAACGGAGACGGTACAGTTCCCAGTGAATCAGCCAAGGCGGATGGTTTTGAAGCAACTGAGAGAGTAGGAGTCGCAGCGAGTCATCGAGGACTTTTGAAGGACGAAACAGTATTGCAGCTTATCCAGAAATGGTTGGGAATTGATGAGAAGGTTAGTAAACACCCAACAACTTCCAAAGTGTTCGATGCTTCTCTGAAGTAG

Protein sequence

MKANFSYLDGHFTSWSTNDIYVQLVECPSIYEMLGNLGFNWHAQPQIQVWQKSSVDGKTSVELKSYGPTDSIALFEEALRNNQIKFHGKTIPLPFNLDILKWATGTRQVIDNARLPDGISFYNIYGTSFDTPFDVCYGSESLPIEDLSEICKTLPQYSYVNGDGTVPSESAKADGFEATERVGVAASHRGLLKDETVLQLIQKWLGIDEKVSKHPTTSKVFDASLK

Homology

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BLAST of Carg26888 vs. NCBI nr
Match: XP_022933151.1 (phospholipase A(1) LCAT3 [Cucurbita moschata])

HSP 1 Score: 416.4 bits (1069), Expect = 6.3e-113
Identity = 200/203 (98.52%), Postives = 201/203 (99.01%), Query Frame = 0


Query: 24  LVECPSIYEMLGNLGFNWHAQPQIQVWQKSSVDGKTSVELKSYGPTDSIALFEEALRNNQ 83
           LVECPSIYEMLGNLGFNWHAQPQIQVWQKSSVDGKTSVELKSYGPTDSIALFEEALRNNQ
Sbjct: 254 LVECPSIYEMLGNLGFNWHAQPQIQVWQKSSVDGKTSVELKSYGPTDSIALFEEALRNNQ 313

Query: 84  IKFHGKTIPLPFNLDILKWATGTRQVIDNARLPDGISFYNIYGTSFDTPFDVCYGSESLP 143
           IKFHGKTIPLPFNLD+LKWATGTRQVIDNA LPDGISFYNIYGTSFDTPFDVCYGSESLP
Sbjct: 314 IKFHGKTIPLPFNLDVLKWATGTRQVIDNASLPDGISFYNIYGTSFDTPFDVCYGSESLP 373

Query: 144 IEDLSEICKTLPQYSYVNGDGTVPSESAKADGFEATERVGVAASHRGLLKDETVLQLIQK 203
           IEDLSEICKTLPQYSYVNGDGTVPSESAKADGFEATERVGVAASHRGLLKDETVLQLIQK
Sbjct: 374 IEDLSEICKTLPQYSYVNGDGTVPSESAKADGFEATERVGVAASHRGLLKDETVLQLIQK 433

Query: 204 WLGIDEKVSKHPTTSKVFDASLK 227
           WLGIDEKVSKH TTSKVFDASLK
Sbjct: 434 WLGIDEKVSKHLTTSKVFDASLK 456

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BLAST of Carg26888 vs. NCBI nr
Match: XP_023546771.1 (phospholipase A(1) LCAT3 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 412.5 bits (1059), Expect = 9.0e-112
Identity = 198/203 (97.54%), Postives = 200/203 (98.52%), Query Frame = 0


Query: 24  LVECPSIYEMLGNLGFNWHAQPQIQVWQKSSVDGKTSVELKSYGPTDSIALFEEALRNNQ 83
           LVECPSIYEMLGNLGFNWHAQPQIQVWQKSSVDGKTSVELKSYGPTDSIALFEEALRNNQ
Sbjct: 253 LVECPSIYEMLGNLGFNWHAQPQIQVWQKSSVDGKTSVELKSYGPTDSIALFEEALRNNQ 312

Query: 84  IKFHGKTIPLPFNLDILKWATGTRQVIDNARLPDGISFYNIYGTSFDTPFDVCYGSESLP 143
           IKFHGKTIPLPFNLDILKWA GTRQVIDNARLPDGISFYNIYGTS DTPFDVCYGSESLP
Sbjct: 313 IKFHGKTIPLPFNLDILKWANGTRQVIDNARLPDGISFYNIYGTSLDTPFDVCYGSESLP 372

Query: 144 IEDLSEICKTLPQYSYVNGDGTVPSESAKADGFEATERVGVAASHRGLLKDETVLQLIQK 203
           IEDLSEICKTLPQYSYVNGDGTVPSESAKADGFEATERVGVAASHRGLLKDETVLQLIQK
Sbjct: 373 IEDLSEICKTLPQYSYVNGDGTVPSESAKADGFEATERVGVAASHRGLLKDETVLQLIQK 432

Query: 204 WLGIDEKVSKHPTTSKVFDASLK 227
           WLGID+KVSKH TTSKVFDA+LK
Sbjct: 433 WLGIDQKVSKHLTTSKVFDAALK 455

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BLAST of Carg26888 vs. NCBI nr
Match: XP_022973913.1 (phospholipase A(1) LCAT3 [Cucurbita maxima])

HSP 1 Score: 409.5 bits (1051), Expect = 7.6e-111
Identity = 195/203 (96.06%), Postives = 200/203 (98.52%), Query Frame = 0


Query: 24  LVECPSIYEMLGNLGFNWHAQPQIQVWQKSSVDGKTSVELKSYGPTDSIALFEEALRNNQ 83
           LVECPSIYEMLGNLGFNWHAQPQIQVWQKSSVDGKTSV+L+SYGPTDSIALFEEALRNNQ
Sbjct: 251 LVECPSIYEMLGNLGFNWHAQPQIQVWQKSSVDGKTSVQLRSYGPTDSIALFEEALRNNQ 310

Query: 84  IKFHGKTIPLPFNLDILKWATGTRQVIDNARLPDGISFYNIYGTSFDTPFDVCYGSESLP 143
           IKFHGKTIPLPFN DIL+WATGTRQVIDNARLPDGISFYNIYGTSFDTPFDVCYGSESLP
Sbjct: 311 IKFHGKTIPLPFNFDILEWATGTRQVIDNARLPDGISFYNIYGTSFDTPFDVCYGSESLP 370

Query: 144 IEDLSEICKTLPQYSYVNGDGTVPSESAKADGFEATERVGVAASHRGLLKDETVLQLIQK 203
           IEDLSEICKT PQYSYVNGDGTVPSESAKADGFEATERVGVAA+HRGLLKDETVLQLIQK
Sbjct: 371 IEDLSEICKTSPQYSYVNGDGTVPSESAKADGFEATERVGVAATHRGLLKDETVLQLIQK 430

Query: 204 WLGIDEKVSKHPTTSKVFDASLK 227
           WLGIDEKVSKH TTSKVFDAS+K
Sbjct: 431 WLGIDEKVSKHLTTSKVFDASMK 453

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BLAST of Carg26888 vs. NCBI nr
Match: XP_004138893.1 (PREDICTED: phospholipase A(1) LCAT3 [Cucumis sativus] >KGN61338.1 hypothetical protein Csa_2G093800 [Cucumis sativus])

HSP 1 Score: 389.4 bits (999), Expect = 8.2e-105
Identity = 184/203 (90.64%), Postives = 195/203 (96.06%), Query Frame = 0


Query: 24  LVECPSIYEMLGNLGFNWHAQPQIQVWQKSSVDGKTSVELKSYGPTDSIALFEEALRNNQ 83
           LVECPSIYEML +LGFNWHAQP IQVWQKSSVDG+TSV LKSYGPTDSIALFEEALRNN+
Sbjct: 246 LVECPSIYEMLASLGFNWHAQPHIQVWQKSSVDGETSVNLKSYGPTDSIALFEEALRNNE 305

Query: 84  IKFHGKTIPLPFNLDILKWATGTRQVIDNARLPDGISFYNIYGTSFDTPFDVCYGSESLP 143
           IKFHGKTIPLPFN DILKWATGTRQVID+A+LPDGISFYNIYGTSFDTPFDVCYGSESLP
Sbjct: 306 IKFHGKTIPLPFNFDILKWATGTRQVIDSAKLPDGISFYNIYGTSFDTPFDVCYGSESLP 365

Query: 144 IEDLSEICKTLPQYSYVNGDGTVPSESAKADGFEATERVGVAASHRGLLKDETVLQLIQK 203
           IEDLSEIC+TLPQYSYV+GDGTVPSESAKADGFEATERVGVAASHRGLLKD+TVLQ IQK
Sbjct: 366 IEDLSEICQTLPQYSYVDGDGTVPSESAKADGFEATERVGVAASHRGLLKDKTVLQYIQK 425

Query: 204 WLGIDEKVSKHPTTSKVFDASLK 227
           WLG+++KV KH TTSKV DASLK
Sbjct: 426 WLGVEQKVGKHLTTSKVVDASLK 448

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BLAST of Carg26888 vs. NCBI nr
Match: XP_008441766.1 (PREDICTED: phospholipase A(1) LCAT3 [Cucumis melo])

HSP 1 Score: 381.7 bits (979), Expect = 1.7e-102
Identity = 180/203 (88.67%), Postives = 193/203 (95.07%), Query Frame = 0


Query: 24  LVECPSIYEMLGNLGFNWHAQPQIQVWQKSSVDGKTSVELKSYGPTDSIALFEEALRNNQ 83
           LVECPSIYEML +LGFNWHAQP IQVWQKSSVDG+TSV+LKSYGPTDSI LF+EALRNN+
Sbjct: 247 LVECPSIYEMLASLGFNWHAQPHIQVWQKSSVDGETSVDLKSYGPTDSIDLFKEALRNNE 306

Query: 84  IKFHGKTIPLPFNLDILKWATGTRQVIDNARLPDGISFYNIYGTSFDTPFDVCYGSESLP 143
           IKFHGKTIPLPFN DILKWATGTRQVID+A+LPDGISFYNIYGTSFDTPFDVCYGSES P
Sbjct: 307 IKFHGKTIPLPFNFDILKWATGTRQVIDSAKLPDGISFYNIYGTSFDTPFDVCYGSESSP 366

Query: 144 IEDLSEICKTLPQYSYVNGDGTVPSESAKADGFEATERVGVAASHRGLLKDETVLQLIQK 203
           IEDLSEIC+TLPQYSYV+GDGTVPSESAKADGFEA ERVGVAASHRGLLKD+TV Q IQK
Sbjct: 367 IEDLSEICQTLPQYSYVDGDGTVPSESAKADGFEAIERVGVAASHRGLLKDKTVFQYIQK 426

Query: 204 WLGIDEKVSKHPTTSKVFDASLK 227
           WLG+++KVSKH TTSKV DASLK
Sbjct: 427 WLGVEQKVSKHLTTSKVVDASLK 449

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BLAST of Carg26888 vs. TAIR10
Match: AT3G03310.1 (lecithin:cholesterol acyltransferase 3)

HSP 1 Score: 258.5 bits (659), Expect = 4.0e-69
Identity = 120/203 (59.11%), Postives = 157/203 (77.34%), Query Frame = 0


Query: 24  LVECPSIYEMLGNLGFNWHAQPQIQVWQKSSV-DGKTSVELKSYGPTDSIALFEEALRNN 83
           LVECPSIYEM+ N  F W  QP+I+VW+K S  D  TSVEL+S+G  +SI LF +AL+NN
Sbjct: 244 LVECPSIYEMMANPDFKWKKQPEIRVWRKKSENDVDTSVELESFGLIESIDLFNDALKNN 303

Query: 84  QIKFHGKTIPLPFNLDILKWATGTRQVIDNARLPDGISFYNIYGTSFDTPFDVCYGSESL 143
           ++ + G  I LPFN  IL WA  TR++++ A+LPDG+SFYNIYG S +TPFDVCYG+E+ 
Sbjct: 304 ELSYGGNKIALPFNFAILDWAAKTREILNKAQLPDGVSFYNIYGVSLNTPFDVCYGTETS 363

Query: 144 PIEDLSEICKTLPQYSYVNGDGTVPSESAKADGFEATERVGVAASHRGLLKDETVLQLIQ 203
           PI+DLSEIC+T+P+Y+YV+GDGTVP+ESA A  F+A   VGV+ SHRGLL+DE V +LIQ
Sbjct: 364 PIDDLSEICQTMPEYTYVDGDGTVPAESAAAAQFKAVASVGVSGSHRGLLRDERVFELIQ 423

Query: 204 KWLGIDEKVS--KHPTTSKVFDA 224
           +WLG++ K +  KH  T KV D+
Sbjct: 424 QWLGVEPKKAKRKHLRTHKVVDS 446

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BLAST of Carg26888 vs. TAIR10
Match: AT4G19860.1 (alpha/beta-Hydrolases superfamily protein)

HSP 1 Score: 191.4 bits (485), Expect = 5.9e-49
Identity = 90/200 (45.00%), Postives = 132/200 (66.00%), Query Frame = 0


Query: 13  TSWSTNDIYVQLVECPSIYEMLGNLGFNWHAQPQIQVW-QKSSVD--GKTSVELKSYGPT 72
           + WS + +   L+ECPSIYE++    F W   P +++W +K S D  G + V L+SY   
Sbjct: 241 SKWSMHQL---LIECPSIYELMCCPYFKWELPPVLELWREKESNDGVGTSYVVLESYCSL 300

Query: 73  DSIALFEEALRNNQIKFHGKTIPLPFNLDILKWATGTRQVIDNARLPDGISFYNIYGTSF 132
           +S+ +F ++L NN   + G++I LPFN  I++WA  T+QV+ +A+LP  + FYNIYGT+ 
Sbjct: 301 ESLEVFTKSLSNNTADYCGESIDLPFNWKIMEWAHKTKQVLASAKLPPKVKFYNIYGTNL 360

Query: 133 DTPFDVCYGSESLPIEDLSEICKTLPQYSYVNGDGTVPSESAKADGFEATERVGVAASHR 192
           +TP  VCYG+E +P++DL+ +    P Y  V+GDGTVP ESA ADG EA  RVGV   HR
Sbjct: 361 ETPHSVCYGNEKMPVKDLTNLRYFQPTYICVDGDGTVPMESAMADGLEAVARVGVPGEHR 420

Query: 193 GLLKDETVLQLIQKWLGIDE 210
           G+L D  V ++++KWL + E
Sbjct: 421 GILNDHRVFRMLKKWLNVGE 437

[Close]

BLAST of Carg26888 vs. Swiss-Prot
Match: sp|Q93V61|LCAT3_ARATH (Phospholipase A(1) LCAT3 OS=Arabidopsis thaliana OX=3702 GN=LCAT3 PE=1 SV=1)

HSP 1 Score: 258.5 bits (659), Expect = 7.1e-68
Identity = 120/203 (59.11%), Postives = 157/203 (77.34%), Query Frame = 0


Query: 24  LVECPSIYEMLGNLGFNWHAQPQIQVWQKSSV-DGKTSVELKSYGPTDSIALFEEALRNN 83
           LVECPSIYEM+ N  F W  QP+I+VW+K S  D  TSVEL+S+G  +SI LF +AL+NN
Sbjct: 244 LVECPSIYEMMANPDFKWKKQPEIRVWRKKSENDVDTSVELESFGLIESIDLFNDALKNN 303

Query: 84  QIKFHGKTIPLPFNLDILKWATGTRQVIDNARLPDGISFYNIYGTSFDTPFDVCYGSESL 143
           ++ + G  I LPFN  IL WA  TR++++ A+LPDG+SFYNIYG S +TPFDVCYG+E+ 
Sbjct: 304 ELSYGGNKIALPFNFAILDWAAKTREILNKAQLPDGVSFYNIYGVSLNTPFDVCYGTETS 363

Query: 144 PIEDLSEICKTLPQYSYVNGDGTVPSESAKADGFEATERVGVAASHRGLLKDETVLQLIQ 203
           PI+DLSEIC+T+P+Y+YV+GDGTVP+ESA A  F+A   VGV+ SHRGLL+DE V +LIQ
Sbjct: 364 PIDDLSEICQTMPEYTYVDGDGTVPAESAAAAQFKAVASVGVSGSHRGLLRDERVFELIQ 423

Query: 204 KWLGIDEKVS--KHPTTSKVFDA 224
           +WLG++ K +  KH  T KV D+
Sbjct: 424 QWLGVEPKKAKRKHLRTHKVVDS 446

[Close]

BLAST of Carg26888 vs. Swiss-Prot
Match: sp|Q71N54|LCAT4_ARATH (Lecithin-cholesterol acyltransferase-like 4 OS=Arabidopsis thaliana OX=3702 GN=LCAT4 PE=1 SV=1)

HSP 1 Score: 191.4 bits (485), Expect = 1.1e-47
Identity = 90/200 (45.00%), Postives = 132/200 (66.00%), Query Frame = 0


Query: 13  TSWSTNDIYVQLVECPSIYEMLGNLGFNWHAQPQIQVW-QKSSVD--GKTSVELKSYGPT 72
           + WS + +   L+ECPSIYE++    F W   P +++W +K S D  G + V L+SY   
Sbjct: 241 SKWSMHQL---LIECPSIYELMCCPYFKWELPPVLELWREKESNDGVGTSYVVLESYCSL 300

Query: 73  DSIALFEEALRNNQIKFHGKTIPLPFNLDILKWATGTRQVIDNARLPDGISFYNIYGTSF 132
           +S+ +F ++L NN   + G++I LPFN  I++WA  T+QV+ +A+LP  + FYNIYGT+ 
Sbjct: 301 ESLEVFTKSLSNNTADYCGESIDLPFNWKIMEWAHKTKQVLASAKLPPKVKFYNIYGTNL 360

Query: 133 DTPFDVCYGSESLPIEDLSEICKTLPQYSYVNGDGTVPSESAKADGFEATERVGVAASHR 192
           +TP  VCYG+E +P++DL+ +    P Y  V+GDGTVP ESA ADG EA  RVGV   HR
Sbjct: 361 ETPHSVCYGNEKMPVKDLTNLRYFQPTYICVDGDGTVPMESAMADGLEAVARVGVPGEHR 420

Query: 193 GLLKDETVLQLIQKWLGIDE 210
           G+L D  V ++++KWL + E
Sbjct: 421 GILNDHRVFRMLKKWLNVGE 437

[Close]

BLAST of Carg26888 vs. TrEMBL
Match: tr|A0A0A0LHR5|A0A0A0LHR5_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G093800 PE=4 SV=1)

HSP 1 Score: 389.4 bits (999), Expect = 5.4e-105
Identity = 184/203 (90.64%), Postives = 195/203 (96.06%), Query Frame = 0


Query: 24  LVECPSIYEMLGNLGFNWHAQPQIQVWQKSSVDGKTSVELKSYGPTDSIALFEEALRNNQ 83
           LVECPSIYEML +LGFNWHAQP IQVWQKSSVDG+TSV LKSYGPTDSIALFEEALRNN+
Sbjct: 246 LVECPSIYEMLASLGFNWHAQPHIQVWQKSSVDGETSVNLKSYGPTDSIALFEEALRNNE 305

Query: 84  IKFHGKTIPLPFNLDILKWATGTRQVIDNARLPDGISFYNIYGTSFDTPFDVCYGSESLP 143
           IKFHGKTIPLPFN DILKWATGTRQVID+A+LPDGISFYNIYGTSFDTPFDVCYGSESLP
Sbjct: 306 IKFHGKTIPLPFNFDILKWATGTRQVIDSAKLPDGISFYNIYGTSFDTPFDVCYGSESLP 365

Query: 144 IEDLSEICKTLPQYSYVNGDGTVPSESAKADGFEATERVGVAASHRGLLKDETVLQLIQK 203
           IEDLSEIC+TLPQYSYV+GDGTVPSESAKADGFEATERVGVAASHRGLLKD+TVLQ IQK
Sbjct: 366 IEDLSEICQTLPQYSYVDGDGTVPSESAKADGFEATERVGVAASHRGLLKDKTVLQYIQK 425

Query: 204 WLGIDEKVSKHPTTSKVFDASLK 227
           WLG+++KV KH TTSKV DASLK
Sbjct: 426 WLGVEQKVGKHLTTSKVVDASLK 448

[Close]

BLAST of Carg26888 vs. TrEMBL
Match: tr|A0A1S3B3Q4|A0A1S3B3Q4_CUCME (phospholipase A(1) LCAT3 OS=Cucumis melo OX=3656 GN=LOC103485824 PE=4 SV=1)

HSP 1 Score: 381.7 bits (979), Expect = 1.1e-102
Identity = 180/203 (88.67%), Postives = 193/203 (95.07%), Query Frame = 0


Query: 24  LVECPSIYEMLGNLGFNWHAQPQIQVWQKSSVDGKTSVELKSYGPTDSIALFEEALRNNQ 83
           LVECPSIYEML +LGFNWHAQP IQVWQKSSVDG+TSV+LKSYGPTDSI LF+EALRNN+
Sbjct: 247 LVECPSIYEMLASLGFNWHAQPHIQVWQKSSVDGETSVDLKSYGPTDSIDLFKEALRNNE 306

Query: 84  IKFHGKTIPLPFNLDILKWATGTRQVIDNARLPDGISFYNIYGTSFDTPFDVCYGSESLP 143
           IKFHGKTIPLPFN DILKWATGTRQVID+A+LPDGISFYNIYGTSFDTPFDVCYGSES P
Sbjct: 307 IKFHGKTIPLPFNFDILKWATGTRQVIDSAKLPDGISFYNIYGTSFDTPFDVCYGSESSP 366

Query: 144 IEDLSEICKTLPQYSYVNGDGTVPSESAKADGFEATERVGVAASHRGLLKDETVLQLIQK 203
           IEDLSEIC+TLPQYSYV+GDGTVPSESAKADGFEA ERVGVAASHRGLLKD+TV Q IQK
Sbjct: 367 IEDLSEICQTLPQYSYVDGDGTVPSESAKADGFEAIERVGVAASHRGLLKDKTVFQYIQK 426

Query: 204 WLGIDEKVSKHPTTSKVFDASLK 227
           WLG+++KVSKH TTSKV DASLK
Sbjct: 427 WLGVEQKVSKHLTTSKVVDASLK 449

[Close]

BLAST of Carg26888 vs. TrEMBL
Match: tr|A0A2I4FBD6|A0A2I4FBD6_9ROSI (phospholipase A(1) LCAT3 isoform X2 OS=Juglans regia OX=51240 GN=LOC108997236 PE=4 SV=1)

HSP 1 Score: 318.5 bits (815), Expect = 1.2e-83
Identity = 145/201 (72.14%), Postives = 173/201 (86.07%), Query Frame = 0


Query: 24  LVECPSIYEMLGNLGFNWHAQPQIQVWQKSSVDGKTSVELKSYGPTDSIALFEEALRNNQ 83
           LVECPSIYEML N  FNW  QP+IQVW+K S D +TSV+L+SYGP +SI LFEEALR+N+
Sbjct: 195 LVECPSIYEMLANPEFNWKKQPEIQVWRKHSTDEETSVDLESYGPIESITLFEEALRDNE 254

Query: 84  IKFHGKTIPLPFNLDILKWATGTRQVIDNARLPDGISFYNIYGTSFDTPFDVCYGSESLP 143
           + + GK + LPFN +ILKWA GTRQVI +A+LPDG+ FYNIYGTSFDTPFDVCYGSE+ P
Sbjct: 255 LNYDGKMVALPFNSEILKWAAGTRQVIYDAKLPDGVCFYNIYGTSFDTPFDVCYGSETSP 314

Query: 144 IEDLSEICKTLPQYSYVNGDGTVPSESAKADGFEATERVGVAASHRGLLKDETVLQLIQK 203
           I+DLSEIC ++PQYSYV+GDGTVP+ESAKADGF+A ERVGVAASHRG+L DETV + IQK
Sbjct: 315 IDDLSEICHSMPQYSYVDGDGTVPAESAKADGFDAVERVGVAASHRGVLHDETVFKYIQK 374

Query: 204 WLGIDEKVSKHPTTSKVFDAS 225
           WLG+D+KV KH  +S+V DAS
Sbjct: 375 WLGVDQKVRKHSKSSRVVDAS 395

[Close]

BLAST of Carg26888 vs. TrEMBL
Match: tr|A0A2I4FBD2|A0A2I4FBD2_9ROSI (phospholipase A(1) LCAT3 isoform X1 OS=Juglans regia OX=51240 GN=LOC108997236 PE=4 SV=1)

HSP 1 Score: 318.5 bits (815), Expect = 1.2e-83
Identity = 145/201 (72.14%), Postives = 173/201 (86.07%), Query Frame = 0


Query: 24  LVECPSIYEMLGNLGFNWHAQPQIQVWQKSSVDGKTSVELKSYGPTDSIALFEEALRNNQ 83
           LVECPSIYEML N  FNW  QP+IQVW+K S D +TSV+L+SYGP +SI LFEEALR+N+
Sbjct: 244 LVECPSIYEMLANPEFNWKKQPEIQVWRKHSTDEETSVDLESYGPIESITLFEEALRDNE 303

Query: 84  IKFHGKTIPLPFNLDILKWATGTRQVIDNARLPDGISFYNIYGTSFDTPFDVCYGSESLP 143
           + + GK + LPFN +ILKWA GTRQVI +A+LPDG+ FYNIYGTSFDTPFDVCYGSE+ P
Sbjct: 304 LNYDGKMVALPFNSEILKWAAGTRQVIYDAKLPDGVCFYNIYGTSFDTPFDVCYGSETSP 363

Query: 144 IEDLSEICKTLPQYSYVNGDGTVPSESAKADGFEATERVGVAASHRGLLKDETVLQLIQK 203
           I+DLSEIC ++PQYSYV+GDGTVP+ESAKADGF+A ERVGVAASHRG+L DETV + IQK
Sbjct: 364 IDDLSEICHSMPQYSYVDGDGTVPAESAKADGFDAVERVGVAASHRGVLHDETVFKYIQK 423

Query: 204 WLGIDEKVSKHPTTSKVFDAS 225
           WLG+D+KV KH  +S+V DAS
Sbjct: 424 WLGVDQKVRKHSKSSRVVDAS 444

[Close]

BLAST of Carg26888 vs. TrEMBL
Match: tr|A0A2P5CDM4|A0A2P5CDM4_PARAD (Lecithin:cholesterol/phospholipid:diacylglycerol acyltransferase OS=Parasponia andersonii OX=3476 GN=PanWU01x14_162260 PE=4 SV=1)

HSP 1 Score: 314.7 bits (805), Expect = 1.7e-82
Identity = 143/201 (71.14%), Postives = 172/201 (85.57%), Query Frame = 0


Query: 24  LVECPSIYEMLGNLGFNWHAQPQIQVWQKSSVDGKTSVELKSYGPTDSIALFEEALRNNQ 83
           LV CPSIYEML N  FNW  QPQIQVW+K S +G+TS EL+SYGP +SI LFEEALR N+
Sbjct: 245 LVACPSIYEMLANPDFNWKKQPQIQVWRKQSKNGETSAELESYGPVESINLFEEALRQNE 304

Query: 84  IKFHGKTIPLPFNLDILKWATGTRQVIDNARLPDGISFYNIYGTSFDTPFDVCYGSESLP 143
           + F GKT+ LPFN  ILKWA+GTR V++N++LPDG+SFYNIYG SF+TP+DVCYGS++ P
Sbjct: 305 LDFDGKTVALPFNFAILKWASGTRDVLNNSKLPDGVSFYNIYGKSFETPYDVCYGSKTTP 364

Query: 144 IEDLSEICKTLPQYSYVNGDGTVPSESAKADGFEATERVGVAASHRGLLKDETVLQLIQK 203
           IEDLSEIC +LP+YSYV+GDGTVPSESA ADGF+A ERVGV A+HR +L+DETV QLIQK
Sbjct: 365 IEDLSEICHSLPEYSYVDGDGTVPSESAMADGFDAVERVGVPATHRQVLQDETVFQLIQK 424

Query: 204 WLGIDEKVSKHPTTSKVFDAS 225
           WLG+D+KV+KH  TS+V DAS
Sbjct: 425 WLGLDQKVNKHSKTSRVADAS 445

The following BLAST results are available for this feature:

BLAST of Carg26888 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022933151.1	6.3e-113	98.52	phospholipase A(1) LCAT3 [Cucurbita moschata]	[more]
XP_023546771.1	9.0e-112	97.54	phospholipase A(1) LCAT3 [Cucurbita pepo subsp. pepo]	[more]
XP_022973913.1	7.6e-111	96.06	phospholipase A(1) LCAT3 [Cucurbita maxima]	[more]
XP_004138893.1	8.2e-105	90.64	PREDICTED: phospholipase A(1) LCAT3 [Cucumis sativus] >KGN61338.1 hypothetical p...	[more]
XP_008441766.1	1.7e-102	88.67	PREDICTED: phospholipase A(1) LCAT3 [Cucumis melo]	[more]

BLAST of Carg26888 vs. TAIR10


Match Name	E-value	Identity	Description
AT3G03310.1	4.0e-69	59.11	lecithin:cholesterol acyltransferase 3	[more]
AT4G19860.1	5.9e-49	45.00	alpha/beta-Hydrolases superfamily protein	[more]

BLAST of Carg26888 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|Q93V61\|LCAT3_ARATH	7.1e-68	59.11	Phospholipase A(1) LCAT3 OS=Arabidopsis thaliana OX=3702 GN=LCAT3 PE=1 SV=1	[more]
sp\|Q71N54\|LCAT4_ARATH	1.1e-47	45.00	Lecithin-cholesterol acyltransferase-like 4 OS=Arabidopsis thaliana OX=3702 GN=L...	[more]

BLAST of Carg26888 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A0A0LHR5\|A0A0A0LHR5_CUCSA	5.4e-105	90.64	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G093800 PE=4 SV=1	[more]
tr\|A0A1S3B3Q4\|A0A1S3B3Q4_CUCME	1.1e-102	88.67	phospholipase A(1) LCAT3 OS=Cucumis melo OX=3656 GN=LOC103485824 PE=4 SV=1	[more]
tr\|A0A2I4FBD6\|A0A2I4FBD6_9ROSI	1.2e-83	72.14	phospholipase A(1) LCAT3 isoform X2 OS=Juglans regia OX=51240 GN=LOC108997236 PE...	[more]
tr\|A0A2I4FBD2\|A0A2I4FBD2_9ROSI	1.2e-83	72.14	phospholipase A(1) LCAT3 isoform X1 OS=Juglans regia OX=51240 GN=LOC108997236 PE...	[more]
tr\|A0A2P5CDM4\|A0A2P5CDM4_PARAD	1.7e-82	71.14	Lecithin:cholesterol/phospholipid:diacylglycerol acyltransferase OS=Parasponia a...	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR029058	AB_hydrolase

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg26888-RA	Carg26888-RA	mRNA

InterPro

Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR029058	Alpha/Beta hydrolase fold	GENE3D	G3DSA:3.40.50.1820		coord: 45..219 e-value: 5.0E-8 score: 34.8
None	No IPR available	PANTHER	PTHR11440	LECITHIN-CHOLESTEROL ACYLTRANSFERASE-RELATED	coord: 20..223
None	No IPR available	PANTHER	PTHR11440:SF53	PHOSPHOLIPASE A 1 LCAT3	coord: 20..223

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Carg26888	Csa2G093800	Cucumber (Chinese Long) v2	carcuB0260
Carg26888	MELO3C008598	Melon (DHL92) v3.5.1	carmeB0237
Carg26888	CSPI02G07920	Wild cucumber (PI 183967)	carcpiB0264
Carg26888	CmaCh05G007930	Cucurbita maxima (Rimu)	carcmaB0322
Carg26888	CmoCh05G008380	Cucurbita moschata (Rifu)	carcmoB0327
Carg26888	Lsi11G009360	Bottle gourd (USVL1VR-Ls)	carlsiB208
Carg26888	Cp4.1LG11g07000	Cucurbita pepo (Zucchini)	carcpeB0330
Carg26888	CsGy2G008200	Cucumber (Gy14) v2	carcgybB0249
Carg26888	MELO3C008598.2	Melon (DHL92) v3.6.1	carmedB0245
Carg26888	CsaV3_2G010330	Cucumber (Chinese Long) v3	carcucB0264
Carg26888	Bhi06G000830	Wax gourd	carwgoB0289

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:

None