Carg26874 (gene) Silver-seed gourd

Overview
NameCarg26874
Typegene
OrganismCucurbita argyrosperma (Silver-seed gourd)
Descriptionprotein NRT1/ PTR FAMILY 3.1
LocationCucurbita_argyrosperma_scaffold_391 : 24003 .. 24705 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
AGAAAATTCCCGAAATACTACTTGTGGCCACAATTAGTCACAGGAGCTGCAAAATTTGTCTTCATCTCTGTTATGAAGATTTGTGAAGAGTGTAAAATGTTGTGATAACGATGAGGTGCCTATAAACAGGGAGAGCTCCCCATAAGCCATTTCCACCACCACTGCCCCAACGCCTTAGAGGAAGGAAGAACCCAACAATGGAGGAGCAGCAAAGCACTAGAAACCATGTGGAAAGGAAGAAGGGCGGCCTTATTACTATGCCCTTCATCTTCGGTACTCTTCTTCTTCTTCCTCTTCGGTTAATTAATTGTTGTTTAAAGTGGGGTTTTGATTTTGGATTTTGTGGGTTTATTGTGGTGAATTAGCTAATGAGATCTGCGAGAAGATTGCTGTGGTTGGTTTTAATACCAACATGATTAGCTACTTGACCAAGCAGCTCCATATGCCATTAACCAAAGGAGCCAATACCATCACCAACTTCAATGGAACCGCCAGCTTGACACCCCTCATCGGAGCCTTCATCGCCGACTCATACGTCGGCCGCTTCTGGACCATCACTGTCGCCTCTATCCTCTACCAGATTGTAACTCCTCTGTTTCCACTCCATATTTTGCTCTGTTTTTCTTCTTACAAACCCATATCATTTTTGTGGATTATTTATTTATTTATTTATTTGACAAAATTTATAGACATGGGAAATTAA

mRNA sequence

AGAAAATTCCCGAAATACTACTTGTGGCCACAATTAGTCACAGGAGCTGCAAAATTTGTCTTCATCTCTGTTATGAAGATTTGTGAAGAGTGTAAAATGTTGTGATAACGATGAGGTGCCTATAAACAGGGAGAGCTCCCCATAAGCCATTTCCACCACCACTGCCCCAACGCCTTAGAGGAAGGAAGAACCCAACAATGGAGGAGCAGCAAAGCACTAGAAACCATGTGGAAAGGAAGAAGGGCGGCCTTATTACTATGCCCTTCATCTTCGCTAATGAGATCTGCGAGAAGATTGCTGTGGTTGGTTTTAATACCAACATGATTAGCTACTTGACCAAGCAGCTCCATATGCCATTAACCAAAGGAGCCAATACCATCACCAACTTCAATGGAACCGCCAGCTTGACACCCCTCATCGGAGCCTTCATCGCCGACTCATACGTCGGCCGCTTCTGGACCATCACTGTCGCCTCTATCCTCTACCAGATTGTAACTCCTCTGTTTCCACTCCATATTTTGCTCTGTTTTTCTTCTTACAAACCCATATCATTTTTGTGGATTATTTATTTATTTATTTATTTGACAAAATTTATAGACATGGGAAATTAA

Coding sequence (CDS)

ATGGAGGAGCAGCAAAGCACTAGAAACCATGTGGAAAGGAAGAAGGGCGGCCTTATTACTATGCCCTTCATCTTCGCTAATGAGATCTGCGAGAAGATTGCTGTGGTTGGTTTTAATACCAACATGATTAGCTACTTGACCAAGCAGCTCCATATGCCATTAACCAAAGGAGCCAATACCATCACCAACTTCAATGGAACCGCCAGCTTGACACCCCTCATCGGAGCCTTCATCGCCGACTCATACGTCGGCCGCTTCTGGACCATCACTGTCGCCTCTATCCTCTACCAGATTGTAACTCCTCTGTTTCCACTCCATATTTTGCTCTGTTTTTCTTCTTACAAACCCATATCATTTTTGTGGATTATTTATTTATTTATTTATTTGACAAAATTTATAGACATGGGAAATTAA

Protein sequence

MEEQQSTRNHVERKKGGLITMPFIFANEICEKIAVVGFNTNMISYLTKQLHMPLTKGANTITNFNGTASLTPLIGAFIADSYVGRFWTITVASILYQIVTPLFPLHILLCFSSYKPISFLWIIYLFIYLTKFIDMGN
Homology
[Close]
BLAST of Carg26874 vs. NCBI nr
Match: XP_022994014.1 (protein NRT1/ PTR FAMILY 3.1 [Cucurbita maxima])

HSP 1 Score: 196.8 bits (499), Expect = 4.7e-47
Identity = 98/98 (100.00%), Postives = 98/98 (100.00%), Query Frame = 0 

Query: 1  MEEQQSTRNHVERKKGGLITMPFIFANEICEKIAVVGFNTNMISYLTKQLHMPLTKGANT 60
          MEEQQSTRNHVERKKGGLITMPFIFANEICEKIAVVGFNTNMISYLTKQLHMPLTKGANT
Sbjct: 1  MEEQQSTRNHVERKKGGLITMPFIFANEICEKIAVVGFNTNMISYLTKQLHMPLTKGANT 60

Query: 61 ITNFNGTASLTPLIGAFIADSYVGRFWTITVASILYQI 99
          ITNFNGTASLTPLIGAFIADSYVGRFWTITVASILYQI
Sbjct: 61 ITNFNGTASLTPLIGAFIADSYVGRFWTITVASILYQI 98

[Close]
BLAST of Carg26874 vs. NCBI nr
Match: XP_023550855.1 (protein NRT1/ PTR FAMILY 3.1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 196.8 bits (499), Expect = 4.7e-47
Identity = 98/98 (100.00%), Postives = 98/98 (100.00%), Query Frame = 0 

Query: 1  MEEQQSTRNHVERKKGGLITMPFIFANEICEKIAVVGFNTNMISYLTKQLHMPLTKGANT 60
          MEEQQSTRNHVERKKGGLITMPFIFANEICEKIAVVGFNTNMISYLTKQLHMPLTKGANT
Sbjct: 1  MEEQQSTRNHVERKKGGLITMPFIFANEICEKIAVVGFNTNMISYLTKQLHMPLTKGANT 60

Query: 61 ITNFNGTASLTPLIGAFIADSYVGRFWTITVASILYQI 99
          ITNFNGTASLTPLIGAFIADSYVGRFWTITVASILYQI
Sbjct: 61 ITNFNGTASLTPLIGAFIADSYVGRFWTITVASILYQI 98

[Close]
BLAST of Carg26874 vs. NCBI nr
Match: XP_022939103.1 (protein NRT1/ PTR FAMILY 3.1 [Cucurbita moschata])

HSP 1 Score: 194.9 bits (494), Expect = 1.8e-46
Identity = 97/98 (98.98%), Postives = 97/98 (98.98%), Query Frame = 0 

Query: 1  MEEQQSTRNHVERKKGGLITMPFIFANEICEKIAVVGFNTNMISYLTKQLHMPLTKGANT 60
          MEE QSTRNHVERKKGGLITMPFIFANEICEKIAVVGFNTNMISYLTKQLHMPLTKGANT
Sbjct: 1  MEEHQSTRNHVERKKGGLITMPFIFANEICEKIAVVGFNTNMISYLTKQLHMPLTKGANT 60

Query: 61 ITNFNGTASLTPLIGAFIADSYVGRFWTITVASILYQI 99
          ITNFNGTASLTPLIGAFIADSYVGRFWTITVASILYQI
Sbjct: 61 ITNFNGTASLTPLIGAFIADSYVGRFWTITVASILYQI 98

[Close]
BLAST of Carg26874 vs. NCBI nr
Match: XP_008445656.1 (PREDICTED: protein NRT1/ PTR FAMILY 3.1 [Cucumis melo])

HSP 1 Score: 176.8 bits (447), Expect = 5.1e-41
Identity = 87/96 (90.62%), Postives = 90/96 (93.75%), Query Frame = 0 

Query: 3  EQQSTRNHVERKKGGLITMPFIFANEICEKIAVVGFNTNMISYLTKQLHMPLTKGANTIT 62
          E + T  H+ERKKGGLITMPFIFANEICEKIAVVGFNTNMISYLTKQLHMP TK ANTIT
Sbjct: 2  EMEKTEKHMERKKGGLITMPFIFANEICEKIAVVGFNTNMISYLTKQLHMPSTKAANTIT 61

Query: 63 NFNGTASLTPLIGAFIADSYVGRFWTITVASILYQI 99
          NF+GTASLTPLIGAFIADSYVGRFWTITVASILYQI
Sbjct: 62 NFSGTASLTPLIGAFIADSYVGRFWTITVASILYQI 97

[Close]
BLAST of Carg26874 vs. NCBI nr
Match: XP_022135586.1 (protein NRT1/ PTR FAMILY 3.1 [Momordica charantia])

HSP 1 Score: 176.4 bits (446), Expect = 6.6e-41
Identity = 87/98 (88.78%), Postives = 91/98 (92.86%), Query Frame = 0 

Query: 1  MEEQQSTRNHVERKKGGLITMPFIFANEICEKIAVVGFNTNMISYLTKQLHMPLTKGANT 60
          MEE+Q+   H  RKKGGLITMPFIFANEICEKIAVVGFNTNMISYLTKQLHMPLT+ ANT
Sbjct: 1  MEEEQTKNKHAGRKKGGLITMPFIFANEICEKIAVVGFNTNMISYLTKQLHMPLTQAANT 60

Query: 61 ITNFNGTASLTPLIGAFIADSYVGRFWTITVASILYQI 99
          ITNF+GTASLTPLIGAFIADSY GRFWTITVASILYQI
Sbjct: 61 ITNFSGTASLTPLIGAFIADSYAGRFWTITVASILYQI 98

[Close]
BLAST of Carg26874 vs. TAIR10
Match: AT1G68570.1 (Major facilitator superfamily protein)

HSP 1 Score: 151.0 bits (380), Expect = 5.4e-37
Identity = 74/108 (68.52%), Postives = 87/108 (80.56%), Query Frame = 0 

Query: 2   EEQQSTRNHVERKKGGLITMPFIFANEICEKIAVVGFNTNMISYLTKQLHMPLTKGANTI 61
           EE++       R KGGLITMPFIFANEICEK+AVVGF+ NMISYLT QLH+PLTK ANT+
Sbjct: 11  EEEKQLHGRPNRPKGGLITMPFIFANEICEKLAVVGFHANMISYLTTQLHLPLTKAANTL 70

Query: 62  TNFNGTASLTPLIGAFIADSYVGRFWTITVASILYQIVTPLFPLHILL 110
           TNF GT+SLTPL+GAFIADS+ GRFWTIT ASI+YQI   L  +  ++
Sbjct: 71  TNFAGTSSLTPLLGAFIADSFAGRFWTITFASIIYQIGMTLLTISAII 118

[Close]
BLAST of Carg26874 vs. TAIR10
Match: AT1G52190.1 (Major facilitator superfamily protein)

HSP 1 Score: 89.7 bits (221), Expect = 1.5e-18
Identity = 43/93 (46.24%), Postives = 62/93 (66.67%), Query Frame = 0 

Query: 2   EEQQSTRNHVERKKGGLITMPFIFANEICEKIAVVGFNTNMISYLTKQLHMPLTKGANTI 61
           E +Q   N  ++ KGG+ITMPFI ANE  EK+A  G   NMI YL +     + KG N +
Sbjct: 9   EAKQIQTNEGKKTKGGIITMPFIIANEAFEKVASYGLLPNMIMYLIRDYRFGVAKGTNVL 68

Query: 62  TNFNGTASLTPLIGAFIADSYVGRFWTITVASI 95
             ++  ++ TPL+GAF++DSY+GRF TI++AS+
Sbjct: 69  FMWSAASNFTPLLGAFLSDSYLGRFLTISIASL 101

[Close]
BLAST of Carg26874 vs. TAIR10
Match: AT3G54140.1 (peptide transporter 1)

HSP 1 Score: 84.3 bits (207), Expect = 6.2e-17
Identity = 38/85 (44.71%), Postives = 54/85 (63.53%), Query Frame = 0 

Query: 12  ERKKGGLITMPFIFANEICEKIAVVGFNTNMISYLTKQLHMPLTKGANTITNFNGTASLT 71
           + K G      FI  NE CE++A  G  TN+++YL  +L+      AN +TN++GT  +T
Sbjct: 22  KEKTGNWKACRFILGNECCERLAYYGMGTNLVNYLESRLNQGNATAANNVTNWSGTCYIT 81

Query: 72  PLIGAFIADSYVGRFWTITVASILY 97
           PLIGAFIAD+Y+GR+WTI     +Y
Sbjct: 82  PLIGAFIADAYLGRYWTIATFVFIY 106

[Close]
BLAST of Carg26874 vs. TAIR10
Match: AT5G01180.1 (peptide transporter 5)

HSP 1 Score: 82.0 bits (201), Expect = 3.1e-16
Identity = 37/85 (43.53%), Postives = 56/85 (65.88%), Query Frame = 0 

Query: 12  ERKKGGLITMPFIFANEICEKIAVVGFNTNMISYLTKQLHMPLTKGANTITNFNGTASLT 71
           + K G      FI   E CE++A  G +TN+I+YL KQ++M     + +++N++GT   T
Sbjct: 23  KNKTGTWKACRFILGTECCERLAYYGMSTNLINYLEKQMNMENVSASKSVSNWSGTCYAT 82

Query: 72  PLIGAFIADSYVGRFWTITVASILY 97
           PLIGAFIAD+Y+GR+WTI    ++Y
Sbjct: 83  PLIGAFIADAYLGRYWTIASFVVIY 107

[Close]
BLAST of Carg26874 vs. TAIR10
Match: AT2G02040.1 (peptide transporter 2)

HSP 1 Score: 81.6 bits (200), Expect = 4.0e-16
Identity = 40/88 (45.45%), Postives = 53/88 (60.23%), Query Frame = 0 

Query: 11  VERKKGGLITMPFIFANEICEKIAVVGFNTNMISYLTKQLHMPLTKGANTITNFNGTASL 70
           ++ K G     PFI  NE CE++A  G   N+I+YLT +LH      A  +T + GT  L
Sbjct: 38  LKEKTGNWKACPFILGNECCERLAYYGIAGNLITYLTTKLHQGNVSAATNVTTWQGTCYL 97

Query: 71  TPLIGAFIADSYVGRFWTITVASILYQI 99
           TPLIGA +AD+Y GR+WTI   S +Y I
Sbjct: 98  TPLIGAVLADAYWGRYWTIACFSGIYFI 125

[Close]
BLAST of Carg26874 vs. Swiss-Prot
Match: sp|Q9SX20|PTR18_ARATH (Protein NRT1/ PTR FAMILY 3.1 OS=Arabidopsis thaliana OX=3702 GN=NPF3.1 PE=2 SV=1)

HSP 1 Score: 151.0 bits (380), Expect = 9.7e-36
Identity = 74/108 (68.52%), Postives = 87/108 (80.56%), Query Frame = 0 

Query: 2   EEQQSTRNHVERKKGGLITMPFIFANEICEKIAVVGFNTNMISYLTKQLHMPLTKGANTI 61
           EE++       R KGGLITMPFIFANEICEK+AVVGF+ NMISYLT QLH+PLTK ANT+
Sbjct: 11  EEEKQLHGRPNRPKGGLITMPFIFANEICEKLAVVGFHANMISYLTTQLHLPLTKAANTL 70

Query: 62  TNFNGTASLTPLIGAFIADSYVGRFWTITVASILYQIVTPLFPLHILL 110
           TNF GT+SLTPL+GAFIADS+ GRFWTIT ASI+YQI   L  +  ++
Sbjct: 71  TNFAGTSSLTPLLGAFIADSFAGRFWTITFASIIYQIGMTLLTISAII 118

[Close]
BLAST of Carg26874 vs. Swiss-Prot
Match: sp|Q9M817|PTR6_ARATH (Protein NRT1/ PTR FAMILY 1.2 OS=Arabidopsis thaliana OX=3702 GN=NPF1.2 PE=1 SV=1)

HSP 1 Score: 89.7 bits (221), Expect = 2.7e-17
Identity = 43/93 (46.24%), Postives = 62/93 (66.67%), Query Frame = 0 

Query: 2   EEQQSTRNHVERKKGGLITMPFIFANEICEKIAVVGFNTNMISYLTKQLHMPLTKGANTI 61
           E +Q   N  ++ KGG+ITMPFI ANE  EK+A  G   NMI YL +     + KG N +
Sbjct: 9   EAKQIQTNEGKKTKGGIITMPFIIANEAFEKVASYGLLPNMIMYLIRDYRFGVAKGTNVL 68

Query: 62  TNFNGTASLTPLIGAFIADSYVGRFWTITVASI 95
             ++  ++ TPL+GAF++DSY+GRF TI++AS+
Sbjct: 69  FMWSAASNFTPLLGAFLSDSYLGRFLTISIASL 101

[Close]
BLAST of Carg26874 vs. Swiss-Prot
Match: sp|Q9M390|PTR1_ARATH (Protein NRT1/ PTR FAMILY 8.1 OS=Arabidopsis thaliana OX=3702 GN=NPF8.1 PE=1 SV=1)

HSP 1 Score: 84.3 bits (207), Expect = 1.1e-15
Identity = 38/85 (44.71%), Postives = 54/85 (63.53%), Query Frame = 0 

Query: 12  ERKKGGLITMPFIFANEICEKIAVVGFNTNMISYLTKQLHMPLTKGANTITNFNGTASLT 71
           + K G      FI  NE CE++A  G  TN+++YL  +L+      AN +TN++GT  +T
Sbjct: 22  KEKTGNWKACRFILGNECCERLAYYGMGTNLVNYLESRLNQGNATAANNVTNWSGTCYIT 81

Query: 72  PLIGAFIADSYVGRFWTITVASILY 97
           PLIGAFIAD+Y+GR+WTI     +Y
Sbjct: 82  PLIGAFIADAYLGRYWTIATFVFIY 106

[Close]
BLAST of Carg26874 vs. Swiss-Prot
Match: sp|Q9LFB8|PTR5_ARATH (Protein NRT1/ PTR FAMILY 8.2 OS=Arabidopsis thaliana OX=3702 GN=NPF8.2 PE=2 SV=1)

HSP 1 Score: 82.0 bits (201), Expect = 5.5e-15
Identity = 37/85 (43.53%), Postives = 56/85 (65.88%), Query Frame = 0 

Query: 12  ERKKGGLITMPFIFANEICEKIAVVGFNTNMISYLTKQLHMPLTKGANTITNFNGTASLT 71
           + K G      FI   E CE++A  G +TN+I+YL KQ++M     + +++N++GT   T
Sbjct: 23  KNKTGTWKACRFILGTECCERLAYYGMSTNLINYLEKQMNMENVSASKSVSNWSGTCYAT 82

Query: 72  PLIGAFIADSYVGRFWTITVASILY 97
           PLIGAFIAD+Y+GR+WTI    ++Y
Sbjct: 83  PLIGAFIADAYLGRYWTIASFVVIY 107

[Close]
BLAST of Carg26874 vs. Swiss-Prot
Match: sp|P46032|PTR2_ARATH (Protein NRT1/ PTR FAMILY 8.3 OS=Arabidopsis thaliana OX=3702 GN=NPF8.3 PE=1 SV=1)

HSP 1 Score: 81.6 bits (200), Expect = 7.2e-15
Identity = 40/88 (45.45%), Postives = 53/88 (60.23%), Query Frame = 0 

Query: 11  VERKKGGLITMPFIFANEICEKIAVVGFNTNMISYLTKQLHMPLTKGANTITNFNGTASL 70
           ++ K G     PFI  NE CE++A  G   N+I+YLT +LH      A  +T + GT  L
Sbjct: 38  LKEKTGNWKACPFILGNECCERLAYYGIAGNLITYLTTKLHQGNVSAATNVTTWQGTCYL 97

Query: 71  TPLIGAFIADSYVGRFWTITVASILYQI 99
           TPLIGA +AD+Y GR+WTI   S +Y I
Sbjct: 98  TPLIGAVLADAYWGRYWTIACFSGIYFI 125

[Close]
BLAST of Carg26874 vs. TrEMBL
Match: tr|A0A1S3BD88|A0A1S3BD88_CUCME (protein NRT1/ PTR FAMILY 3.1 OS=Cucumis melo OX=3656 GN=LOC103488612 PE=4 SV=1)

HSP 1 Score: 176.8 bits (447), Expect = 3.3e-41
Identity = 87/96 (90.62%), Postives = 90/96 (93.75%), Query Frame = 0 

Query: 3  EQQSTRNHVERKKGGLITMPFIFANEICEKIAVVGFNTNMISYLTKQLHMPLTKGANTIT 62
          E + T  H+ERKKGGLITMPFIFANEICEKIAVVGFNTNMISYLTKQLHMP TK ANTIT
Sbjct: 2  EMEKTEKHMERKKGGLITMPFIFANEICEKIAVVGFNTNMISYLTKQLHMPSTKAANTIT 61

Query: 63 NFNGTASLTPLIGAFIADSYVGRFWTITVASILYQI 99
          NF+GTASLTPLIGAFIADSYVGRFWTITVASILYQI
Sbjct: 62 NFSGTASLTPLIGAFIADSYVGRFWTITVASILYQI 97

[Close]
BLAST of Carg26874 vs. TrEMBL
Match: tr|V4TM66|V4TM66_9ROSI (Uncharacterized protein OS=Citrus clementina OX=85681 GN=CICLE_v10031055mg PE=4 SV=1)

HSP 1 Score: 164.1 bits (414), Expect = 2.2e-37
Identity = 74/96 (77.08%), Postives = 89/96 (92.71%), Query Frame = 0 

Query: 3   EQQSTRNHVERKKGGLITMPFIFANEICEKIAVVGFNTNMISYLTKQLHMPLTKGANTIT 62
           E++ + +HV+R+KGG+ITMPFIF+NE+CEK+AVVGFNTNMISYLT QLHMPLTK ANT+T
Sbjct: 6   EEKGSNSHVKRQKGGMITMPFIFSNEVCEKLAVVGFNTNMISYLTTQLHMPLTKAANTLT 65

Query: 63  NFNGTASLTPLIGAFIADSYVGRFWTITVASILYQI 99
           NF GT SLTPLIGAF+AD+Y GRFWTIT+ASI+YQI
Sbjct: 66  NFGGTGSLTPLIGAFVADAYAGRFWTITIASIIYQI 101

[Close]
BLAST of Carg26874 vs. TrEMBL
Match: tr|A0A2H5P4I0|A0A2H5P4I0_CITUN (Uncharacterized protein OS=Citrus unshiu OX=55188 GN=CUMW_101200 PE=4 SV=1)

HSP 1 Score: 164.1 bits (414), Expect = 2.2e-37
Identity = 74/96 (77.08%), Postives = 89/96 (92.71%), Query Frame = 0 

Query: 3   EQQSTRNHVERKKGGLITMPFIFANEICEKIAVVGFNTNMISYLTKQLHMPLTKGANTIT 62
           E++ + +HV+R+KGG+ITMPFIF+NE+CEK+AVVGFNTNMISYLT QLHMPLTK ANT+T
Sbjct: 6   EEKGSNSHVKRQKGGMITMPFIFSNEVCEKLAVVGFNTNMISYLTTQLHMPLTKAANTLT 65

Query: 63  NFNGTASLTPLIGAFIADSYVGRFWTITVASILYQI 99
           NF GT SLTPLIGAF+AD+Y GRFWTIT+ASI+YQI
Sbjct: 66  NFGGTGSLTPLIGAFVADAYAGRFWTITIASIIYQI 101

[Close]
BLAST of Carg26874 vs. TrEMBL
Match: tr|A0A067FRF1|A0A067FRF1_CITSI (Uncharacterized protein OS=Citrus sinensis OX=2711 GN=CISIN_1g021653mg PE=4 SV=1)

HSP 1 Score: 164.1 bits (414), Expect = 2.2e-37
Identity = 74/96 (77.08%), Postives = 89/96 (92.71%), Query Frame = 0 

Query: 3   EQQSTRNHVERKKGGLITMPFIFANEICEKIAVVGFNTNMISYLTKQLHMPLTKGANTIT 62
           E++ + +HV+R+KGG+ITMPFIF+NE+CEK+AVVGFNTNMISYLT QLHMPLTK ANT+T
Sbjct: 6   EEKGSNSHVKRQKGGMITMPFIFSNEVCEKLAVVGFNTNMISYLTTQLHMPLTKAANTLT 65

Query: 63  NFNGTASLTPLIGAFIADSYVGRFWTITVASILYQI 99
           NF GT SLTPLIGAF+AD+Y GRFWTIT+ASI+YQI
Sbjct: 66  NFGGTGSLTPLIGAFVADAYAGRFWTITIASIIYQI 101

[Close]
BLAST of Carg26874 vs. TrEMBL
Match: tr|A0A067G2N3|A0A067G2N3_CITSI (Uncharacterized protein OS=Citrus sinensis OX=2711 GN=CISIN_1g021653mg PE=4 SV=1)

HSP 1 Score: 164.1 bits (414), Expect = 2.2e-37
Identity = 74/96 (77.08%), Postives = 89/96 (92.71%), Query Frame = 0 

Query: 3   EQQSTRNHVERKKGGLITMPFIFANEICEKIAVVGFNTNMISYLTKQLHMPLTKGANTIT 62
           E++ + +HV+R+KGG+ITMPFIF+NE+CEK+AVVGFNTNMISYLT QLHMPLTK ANT+T
Sbjct: 6   EEKGSNSHVKRQKGGMITMPFIFSNEVCEKLAVVGFNTNMISYLTTQLHMPLTKAANTLT 65

Query: 63  NFNGTASLTPLIGAFIADSYVGRFWTITVASILYQI 99
           NF GT SLTPLIGAF+AD+Y GRFWTIT+ASI+YQI
Sbjct: 66  NFGGTGSLTPLIGAFVADAYAGRFWTITIASIIYQI 101

The following BLAST results are available for this feature:
BLAST of Carg26874 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_022994014.14.7e-47100.00protein NRT1/ PTR FAMILY 3.1 [Cucurbita maxima][more]
XP_023550855.14.7e-47100.00protein NRT1/ PTR FAMILY 3.1 [Cucurbita pepo subsp. pepo][more]
XP_022939103.11.8e-4698.98protein NRT1/ PTR FAMILY 3.1 [Cucurbita moschata][more]
XP_008445656.15.1e-4190.63PREDICTED: protein NRT1/ PTR FAMILY 3.1 [Cucumis melo][more]
XP_022135586.16.6e-4188.78protein NRT1/ PTR FAMILY 3.1 [Momordica charantia][more]
BLAST of Carg26874 vs. TAIR10
Match NameE-valueIdentityDescription
AT1G68570.15.4e-3768.52Major facilitator superfamily protein[more]
AT1G52190.11.5e-1846.24Major facilitator superfamily protein[more]
AT3G54140.16.2e-1744.71peptide transporter 1[more]
AT5G01180.13.1e-1643.53peptide transporter 5[more]
AT2G02040.14.0e-1645.45peptide transporter 2[more]
BLAST of Carg26874 vs. Swiss-Prot
Match NameE-valueIdentityDescription
sp|Q9SX20|PTR18_ARATH9.7e-3668.52Protein NRT1/ PTR FAMILY 3.1 OS=Arabidopsis thaliana OX=3702 GN=NPF3.1 PE=2 SV=1[more]
sp|Q9M817|PTR6_ARATH2.7e-1746.24Protein NRT1/ PTR FAMILY 1.2 OS=Arabidopsis thaliana OX=3702 GN=NPF1.2 PE=1 SV=1[more]
sp|Q9M390|PTR1_ARATH1.1e-1544.71Protein NRT1/ PTR FAMILY 8.1 OS=Arabidopsis thaliana OX=3702 GN=NPF8.1 PE=1 SV=1[more]
sp|Q9LFB8|PTR5_ARATH5.5e-1543.53Protein NRT1/ PTR FAMILY 8.2 OS=Arabidopsis thaliana OX=3702 GN=NPF8.2 PE=2 SV=1[more]
sp|P46032|PTR2_ARATH7.2e-1545.45Protein NRT1/ PTR FAMILY 8.3 OS=Arabidopsis thaliana OX=3702 GN=NPF8.3 PE=1 SV=1[more]
BLAST of Carg26874 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A1S3BD88|A0A1S3BD88_CUCME3.3e-4190.63protein NRT1/ PTR FAMILY 3.1 OS=Cucumis melo OX=3656 GN=LOC103488612 PE=4 SV=1[more]
tr|V4TM66|V4TM66_9ROSI2.2e-3777.08Uncharacterized protein OS=Citrus clementina OX=85681 GN=CICLE_v10031055mg PE=4 ... [more]
tr|A0A2H5P4I0|A0A2H5P4I0_CITUN2.2e-3777.08Uncharacterized protein OS=Citrus unshiu OX=55188 GN=CUMW_101200 PE=4 SV=1[more]
tr|A0A067FRF1|A0A067FRF1_CITSI2.2e-3777.08Uncharacterized protein OS=Citrus sinensis OX=2711 GN=CISIN_1g021653mg PE=4 SV=1[more]
tr|A0A067G2N3|A0A067G2N3_CITSI2.2e-3777.08Uncharacterized protein OS=Citrus sinensis OX=2711 GN=CISIN_1g021653mg PE=4 SV=1[more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0022857transmembrane transporter activity
Vocabulary: Cellular Component
TermDefinition
GO:0016020membrane
Vocabulary: Biological Process
TermDefinition
GO:0055085transmembrane transport
Vocabulary: INTERPRO
TermDefinition
IPR036259MFS_trans_sf
IPR000109POT_fam
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0055085 transmembrane transport
cellular_component GO:0016020 membrane
molecular_function GO:0022857 transmembrane transporter activity
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Carg26874-RACarg26874-RAmRNA


InterPro
Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3DG3DSA:1.20.1250.20coord: 2..132
e-value: 3.2E-32
score: 113.3
NoneNo IPR availablePANTHERPTHR11654:SF178PROTEIN NRT1/ PTR FAMILY 3.1coord: 1..100
IPR000109Proton-dependent oligopeptide transporter familyPANTHERPTHR11654OLIGOPEPTIDE TRANSPORTER-RELATEDcoord: 1..100
IPR036259MFS transporter superfamilySUPERFAMILYSSF103473MFS general substrate transportercoord: 30..127

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Carg26874Cla97C08G148110Watermelon (97103) v2carwmbB1001
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Carg26874Cucurbita maxima (Rimu)carcmaB1301
Carg26874Cucurbita maxima (Rimu)carcmaB1302
Carg26874Cucurbita moschata (Rifu)carcmoB1271
Carg26874Cucurbita moschata (Rifu)carcmoB1272
Carg26874Cucurbita pepo (Zucchini)carcpeB1316
Carg26874Cucurbita pepo (Zucchini)carcpeB1317
Carg26874Wild cucumber (PI 183967)carcpiB0988
Carg26874Cucumber (Chinese Long) v2carcuB0966
Carg26874Cucumber (Chinese Long) v3carcucB0994
Carg26874Melon (DHL92) v3.6.1carmedB0938
Carg26874Watermelon (Charleston Gray)carwcgB0927
Carg26874Watermelon (97103) v1carwmB0952