Carg26643 (gene) Silver-seed gourd | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Carg26643
Type	gene
Organism	Cucurbita argyrosperma (Silver-seed gourd)
Description	Polyadenylate-binding protein 1-B-binding protein
Location	Cucurbita_argyrosperma_scaffold_241 : 7919 .. 8815 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

CACAAGCTAGAACAATGGAATTCCTTAAAAAAAAACCCTCAAATCTTCTCCTTCTTCTTCAACCTCAAAGAAACCATCACATTGATCTTCACACCCACAACAATCTTCGCCCAAATCGCTCTCGCTTTCATTCTCCCTCTCTCTCTCCTAATCTTCACCCAATCCACCCATTCTCCGCCCTTCAATTCGCTTCGTAGTTTCTTCTCCGCCATCTTCTTCTTCCTCTCCACCTCCACCGCCGTCTACGCCGCCGCCTGCATTCACGCCGATCACGACGTCTCTTTCCGACAAGTAATCGCCGCCGCGCCCAAGGTTTGCAAGCGACATTTCATCACTTTCCTCTGTCTTCTCGCGGACTTCTTAGCCTTCAATTTCTTCGCTGTTTCCGCGATTCTACTGATTTTCGTGATATCTTTTCTTCTCAACTATGAACGATTTGAAATTTTCAAGGCAGCATTGATTCTATTCTTGTCTGCGGCGGCCGTTTATTTTGCCCTAATTTGGCAAATCGCGAGCGTTGTCTCTGTTTTTGAAACAGAGGCGTACGGATTCGAAGCCATTGCTAGAAGTAAGGAGCTGATTGAGGGGAAAATGGCGATAGGTTTGATTCTTCTGGCTTTAATCGGTTCGCCTTTTGGATTGATTCTGTTTGTGATTCGTTATTGCGTTGAATCTGCGTTGGTGCGTGAGGGGATTTTGGGGATTGTTTGGATGTGTTCGTTTGTTATGTTCTTGTTGATTGGAACTGTGTTGTATTTGGTCTGTAAATCGTATCACTGTGAGAGAATCGATGAATCGGCTCTTTGTGATTGTCTTCGAGGTTATTTGCCGGTGTAGTTGAAGGTTGAAGACGATGATGACTACGAAAAACCTTCGACGGGACACGATACCGTTTAA

mRNA sequence

CACAAGCTAGAACAATGGAATTCCTTAAAAAAAAACCCTCAAATCTTCTCCTTCTTCTTCAACCTCAAAGAAACCATCACATTGATCTTCACACCCACAACAATCTTCGCCCAAATCGCTCTCGCTTTCATTCTCCCTCTCTCTCTCCTAATCTTCACCCAATCCACCCATTCTCCGCCCTTCAATTCGCTTCGTAGTTTCTTCTCCGCCATCTTCTTCTTCCTCTCCACCTCCACCGCCGTCTACGCCGCCGCCTGCATTCACGCCGATCACGACGTCTCTTTCCGACAAGTAATCGCCGCCGCGCCCAAGGTTTGCAAGCGACATTTCATCACTTTCCTCTGTCTTCTCGCGGACTTCTTAGCCTTCAATTTCTTCGCTGTTTCCGCGATTCTACTGATTTTCGTGATATCTTTTCTTCTCAACTATGAACGATTTGAAATTTTCAAGGCAGCATTGATTCTATTCTTGTCTGCGGCGGCCGTTTATTTTGCCCTAATTTGGCAAATCGCGAGCGTTGTCTCTGTTTTTGAAACAGAGGCGTACGGATTCGAAGCCATTGCTAGAAGTAAGGAGCTGATTGAGGGGAAAATGGCGATAGGTTTGATTCTTCTGGCTTTAATCGGTTCGCCTTTTGGATTGATTCTGTTTGTGATTCGTTATTGCGTTGAATCTGCGTTGGTGCGTGAGGGGATTTTGGGGATTGTTTGGATGTGTTCGTTTGTTATGTTCTTGTTGATTGGAACTGTGTTGTATTTGGTCTGTAAATCGTATCACTGTGAGAGAATCGATGAATCGGCTCTTTGTGATTGTCTTCGAGGTTATTTGCCGTTGAAGGTTGAAGACGATGATGACTACGAAAAACCTTCGACGGGACACGATACCGTTTAA

Coding sequence (CDS)

CACAAGCTAGAACAATGGAATTCCTTAAAAAAAAACCCTCAAATCTTCTCCTTCTTCTTCAACCTCAAAGAAACCATCACATTGATCTTCACACCCACAACAATCTTCGCCCAAATCGCTCTCGCTTTCATTCTCCCTCTCTCTCTCCTAATCTTCACCCAATCCACCCATTCTCCGCCCTTCAATTCGCTTCGTAGTTTCTTCTCCGCCATCTTCTTCTTCCTCTCCACCTCCACCGCCGTCTACGCCGCCGCCTGCATTCACGCCGATCACGACGTCTCTTTCCGACAAGTAATCGCCGCCGCGCCCAAGGTTTGCAAGCGACATTTCATCACTTTCCTCTGTCTTCTCGCGGACTTCTTAGCCTTCAATTTCTTCGCTGTTTCCGCGATTCTACTGATTTTCGTGATATCTTTTCTTCTCAACTATGAACGATTTGAAATTTTCAAGGCAGCATTGATTCTATTCTTGTCTGCGGCGGCCGTTTATTTTGCCCTAATTTGGCAAATCGCGAGCGTTGTCTCTGTTTTTGAAACAGAGGCGTACGGATTCGAAGCCATTGCTAGAAGTAAGGAGCTGATTGAGGGGAAAATGGCGATAGGTTTGATTCTTCTGGCTTTAATCGGTTCGCCTTTTGGATTGATTCTGTTTGTGATTCGTTATTGCGTTGAATCTGCGTTGGTGCGTGAGGGGATTTTGGGGATTGTTTGGATGTGTTCGTTTGTTATGTTCTTGTTGATTGGAACTGTGTTGTATTTGGTCTGTAAATCGTATCACTGTGAGAGAATCGATGAATCGGCTCTTTGTGATTGTCTTCGAGGTTATTTGCCGTTGAAGGTTGAAGACGATGATGACTACGAAAAACCTTCGACGGGACACGATACCGTTTAA

Protein sequence

HKLEQWNSLKKNPQIFSFFFNLKETITLIFTPTTIFAQIALAFILPLSLLIFTQSTHSPPFNSLRSFFSAIFFFLSTSTAVYAAACIHADHDVSFRQVIAAAPKVCKRHFITFLCLLADFLAFNFFAVSAILLIFVISFLLNYERFEIFKAALILFLSAAAVYFALIWQIASVVSVFETEAYGFEAIARSKELIEGKMAIGLILLALIGSPFGLILFVIRYCVESALVREGILGIVWMCSFVMFLLIGTVLYLVCKSYHCERIDESALCDCLRGYLPLKVEDDDDYEKPSTGHDTV

Homology

[Close]

BLAST of Carg26643 vs. NCBI nr
Match: XP_022936738.1 (uncharacterized protein LOC111443242 [Cucurbita moschata])

HSP 1 Score: 334.3 bits (856), Expect = 4.1e-88
Identity = 203/285 (71.23%), Postives = 204/285 (71.58%), Query Frame = 0


Query: 14  QIFSFFFNLKETITLIFTPTTIFAQIALAFILPLSLLIFTQSTHSPPFNSLRSFFSAIFF 73
           Q F  +  LKETITLIFTPTTIFAQIALAFILPLSLLIFTQSTHSPPFNSLRSFFSAIFF
Sbjct: 9   QFFGIYEILKETITLIFTPTTIFAQIALAFILPLSLLIFTQSTHSPPFNSLRSFFSAIFF 68

Query: 74  FLSTSTAVYAAACIHADHDVSFRQVIAAAPKVCKRHFITFLCLLADFLAFNFFAVSAILL 133
           FLSTSTAVYAAACIHADHDVSFRQVIAAAPKVCKRHFITFLCLLAD LAFNFFAVSAILL
Sbjct: 69  FLSTSTAVYAAACIHADHDVSFRQVIAAAPKVCKRHFITFLCLLADLLAFNFFAVSAILL 128

Query: 134 IFVISFLLNYERFEIFKAALILFLSAAAVYFALIWQIASVVSVFETEAYGFEAIARSKEL 193
           IFVISFLLNYERFEIFKAALILFLSAAAVYFALIWQIASVVSVFETEAYGFEAIARSKEL
Sbjct: 129 IFVISFLLNYERFEIFKAALILFLSAAAVYFALIWQIASVVSVFETEAYGFEAIARSKEL 188

Query: 194 IEGKMAIGLILLALIGSPFGLILFVIRYCVESALVREGILGIVWMCSFVMFLLIGTVLYL 253
           IEGKMAI                                                     
Sbjct: 189 IEGKMAI----------------------------------------------------- 220

Query: 254 VCKSYHCERIDESALCDCLRGYLP--LKVEDDDDYEKPSTGHDTV 297
                               GYLP  LKVEDDDDYEKPSTGHDTV
Sbjct: 249 --------------------GYLPVELKVEDDDDYEKPSTGHDTV 220

[Close]

BLAST of Carg26643 vs. NCBI nr
Match: XP_023535684.1 (uncharacterized protein LOC111797045 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 327.0 bits (837), Expect = 6.5e-86
Identity = 197/285 (69.12%), Postives = 203/285 (71.23%), Query Frame = 0


Query: 14  QIFSFFFNLKETITLIFTPTTIFAQIALAFILPLSLLIFTQSTHSPPFNSLRSFFSAIFF 73
           Q F  +  LKETITLIFTPTTIFAQIALAF+LPLSLLIFT+STHSPPFNSLRSFFSAIFF
Sbjct: 9   QFFGIYEILKETITLIFTPTTIFAQIALAFLLPLSLLIFTKSTHSPPFNSLRSFFSAIFF 68

Query: 74  FLSTSTAVYAAACIHADHDVSFRQVIAAAPKVCKRHFITFLCLLADFLAFNFFAVSAILL 133
           FLSTS AVYAAAC+HADHDVSFRQVIAA+PKVCKRHFITFLCLLADFLAFNFFAVSAILL
Sbjct: 69  FLSTSAAVYAAACLHADHDVSFRQVIAASPKVCKRHFITFLCLLADFLAFNFFAVSAILL 128

Query: 134 IFVISFLLNYERFEIFKAALILFLSAAAVYFALIWQIASVVSVFETEAYGFEAIARSKEL 193
           IFVISFLLNYERFE FKAALILFLSAAAVYFALIWQIASVVSVFETE+YGFEAIARSKEL
Sbjct: 129 IFVISFLLNYERFESFKAALILFLSAAAVYFALIWQIASVVSVFETESYGFEAIARSKEL 188

Query: 194 IEGKMAIGLILLALIGSPFGLILFVIRYCVESALVREGILGIVWMCSFVMFLLIGTVLYL 253
           IEGKMAI                                                     
Sbjct: 189 IEGKMAI----------------------------------------------------- 220

Query: 254 VCKSYHCERIDESALCDCLRGYLP--LKVEDDDDYEKPSTGHDTV 297
                               GYLP  LKVEDDDDYEKPSTGHDTV
Sbjct: 249 --------------------GYLPVELKVEDDDDYEKPSTGHDTV 220

[Close]

BLAST of Carg26643 vs. NCBI nr
Match: KGN63125.1 (hypothetical protein Csa_2G404770 [Cucumis sativus])

HSP 1 Score: 223.4 bits (568), Expect = 1.0e-54
Identity = 151/295 (51.19%), Postives = 185/295 (62.71%), Query Frame = 0


Query: 10  KKNPQIFSFFFNLKETITLIFTPTTIFAQIALAFILPLSLLIFTQST--------HSPPF 69
           +K  Q    +    ET  LIFT   IF+QI LAFILPLSLLIFT S         HS  F
Sbjct: 5   QKKLQFLGIYGIFIETFRLIFTARVIFSQITLAFILPLSLLIFTLSQSSSNPWTFHSFSF 64

Query: 70  NSLRSFFSAIFFFLSTSTAVYAAACIHADHDVSFRQVIAAAPKVCKRHFITFLCLLADFL 129
           N                 AV++AAC   D  ++F  +I  APK+  +  +TFLCL+ DFL
Sbjct: 65  NFTLXXXXXXXXXXXXXXAVFSAACTFTDCRITFHHLILVAPKISIQLLVTFLCLIIDFL 124

Query: 130 AFNFFAVSAIL-LIFVISFLLNYERFEIFKAALILFLSAAAV-YFALIWQIASVVSVFET 189
           AFNF A+SA   +  +I  LLNYE  E     LIL L    + YF LIWQI+SVVSVFE 
Sbjct: 125 AFNFIALSATTPIAIMIPLLLNYEPMEFLTQFLILLLCIEMMFYFGLIWQISSVVSVFEA 184

Query: 190 EAYGFEAIARSKELIEGKMAIGLILLALIGSPFGLILFVIRY--CVESALVREGILGIVW 249
           ++YGFEAIARSKE+I+GKM +GLILL LI  P G+++FV+ Y   VESALVR GI+G VW
Sbjct: 185 DSYGFEAIARSKEVIKGKMMMGLILLILICFPVGVVVFVVHYGIVVESALVRVGIMGSVW 244

Query: 250 MCSFVMFLLIGTVLYLVCKSYHCERIDESALCDCLRGYLPL-----KVEDDDDYE 288
           + SF+MFLL GTVLYLVC+ +  ERI+ES L D L+GY P+     KVE D D E
Sbjct: 245 IYSFMMFLLSGTVLYLVCRLFKGERIEESTLSDHLQGYFPIKSEYVKVEGDSDIE 299

[Close]

BLAST of Carg26643 vs. NCBI nr
Match: ADN33683.1 (hypothetical protein [Cucumis melo subsp. melo])

HSP 1 Score: 216.1 bits (549), Expect = 1.6e-52
Identity = 150/296 (50.68%), Postives = 185/296 (62.50%), Query Frame = 0


Query: 10  KKNPQIFSFFFNLKETITLIFTPTTIFAQIALAFILPLSLLIFTQSTHSPPFNSLRSFFS 69
           +K  Q    +    ET  LIFT   IF+QI LAFILPLSLLIFT S  S P++S     S
Sbjct: 5   QKRLQFLGIYGIFIETFKLIFTARVIFSQITLAFILPLSLLIFTLSQSSNPWSS----HS 64

Query: 70  AIFFF-----------LSTSTAVYAAACIHADHDVSFRQVIAAAPKVCKRHFITFLCLLA 129
             F+F                          D  ++F  +I  APK+  +  +TFLCL+ 
Sbjct: 65  LSFYFXXXXXXXXXXXXXXXXXXXXXXXXFTDCQITFHHLILVAPKISMQLLVTFLCLII 124

Query: 130 DFLAFNFFAVSAILLI-FVISFLLNYERFEIFKAALILFLSAAAVYFALIWQIASVVSVF 189
           DFLAFNF A+ AI LI  VIS LL YE  E+    L+LFL     YF LIWQI+SVVSVF
Sbjct: 125 DFLAFNFIALPAITLIAIVISLLLIYEPLELLTQLLVLFLCIEVFYFGLIWQISSVVSVF 184

Query: 190 ETEAYGFEAIARSKELIEGKMAIGLILLALIGSPFGLILFVIRYCV-ESALVREGILGIV 249
           E ++YGFEAIA SKE+++GKM +  ILL LI  PFG+I+FV+ Y V ESALVR GILG V
Sbjct: 185 EADSYGFEAIATSKEVMKGKMMMASILLILICFPFGVIVFVLSYGVAESALVRVGILGNV 244

Query: 250 WMCSFVMFLLIGTVLYLVCKSYHCERIDESALCDCLRGYL-----PLKVEDDDDYE 288
           W+ SF+MFLL GTVLYLVCK ++ + IDESAL + L+GY       LKVEDD++ E
Sbjct: 245 WIYSFMMFLLSGTVLYLVCKLFNGQSIDESALSNHLQGYFQINFESLKVEDDNNIE 296

[Close]

BLAST of Carg26643 vs. NCBI nr
Match: XP_008441626.1 (PREDICTED: uncharacterized protein LOC103485706 [Cucumis melo])

HSP 1 Score: 178.3 bits (451), Expect = 3.8e-41
Identity = 112/184 (60.87%), Postives = 136/184 (73.91%), Query Frame = 0


Query: 111 ITFLCLLADFLAFNFFAVSAILLI-FVISFLLNYERFEIFKAALILFLSAAAVYFALIWQ 170
           +TFLCL+ DFLAFNF A+ AI LI  VIS LL YE  E+    L+LFL     YF LIWQ
Sbjct: 5   VTFLCLIIDFLAFNFIALPAITLIAIVISLLLIYEPLELLTQLLVLFLCIEVFYFGLIWQ 64

Query: 171 IASVVSVFETEAYGFEAIARSKELIEGKMAIGLILLALIGSPFGLILFVIRYCV-ESALV 230
           I+SVVSVFE ++YGFEAIA SKE+++GKM +  ILL LI  PFG+I+FV+ Y V ESALV
Sbjct: 65  ISSVVSVFEADSYGFEAIATSKEVMKGKMMMASILLILICFPFGVIVFVLSYGVAESALV 124

Query: 231 REGILGIVWMCSFVMFLLIGTVLYLVCKSYHCERIDESALCDCLRGYL-----PLKVEDD 288
           R GILG VW+ SF+MFLL GTVLYLVCK ++ + IDESAL + L+GY       LKVEDD
Sbjct: 125 RVGILGNVWIYSFMMFLLSGTVLYLVCKLFNGQSIDESALSNHLQGYFQINFESLKVEDD 184

[Close]

BLAST of Carg26643 vs. TAIR10
Match: AT1G31130.1 (unknown protein)

HSP 1 Score: 92.4 bits (228), Expect = 4.9e-19
Identity = 105/301 (34.88%), Postives = 148/301 (49.17%), Query Frame = 0


Query: 22  LKETITLIFTPTTIFAQIALAFILPLSLLIFTQSTHSPPF----------NSLRS----- 81
           L+E+I++       F  I L+FI PLS  I   S  + P           NS RS     
Sbjct: 17  LQESISIKKRSPRTFYLITLSFIFPLSFAILAHSLFTQPILAKLDKSDPPNSDRSRHDWT 76

Query: 82  ------FFSAIFFF----LSTSTAVYAAACIHADHDVSFRQVIAAAPKVCKRHFITFLCL 141
                 F   IF F    LST+  V+  A ++    VSF   ++A PKV KR FITFL  
Sbjct: 77  VLLIFQFSYLIFLFAFSLLSTAAVVFTVASLYTGKPVSFSSTLSAIPKVFKRLFITFL-- 136

Query: 142 LADFLAFNFFAVSAILLIFVISFL----LNYERFEIFKAALILFL-SAAAVYFALIWQIA 201
              ++A   FA +A+  +F++  L    LN     I    +I  L     VYF  +W + 
Sbjct: 137 ---WVALLMFAYNAVFFVFLVMLLVALDLNSLGLAIVAGVIISVLYFGVHVYFTALWHLG 196

Query: 202 SVVSVFETEAYGFEAIARSKELIEG--KMAIGLI-----LLALIGSPFGLILF--VIRYC 261
           SV+SV E   YG  A+ ++ EL++G  KMA+GLI     L  LIG  FG ++     +Y 
Sbjct: 197 SVISVLE-PVYGIAAMRKAYELLKGKTKMAMGLIFVYLFLCGLIGVVFGAVVVHGGGKYG 256

Query: 262 VESALVREGILGIVWMCSFVMFLLIGTVLYLVCKSYHCERIDESALCDCLRGYL----PL 280
             +  +  G+L  V +   ++ LL+ +V Y VCKSYH + ID++AL D L GYL    PL
Sbjct: 257 TFTRTLVGGLLVGVLVMVNLVGLLVQSVFYYVCKSYHHQTIDKTALYDQLGGYLGDYVPL 311

[Close]

BLAST of Carg26643 vs. TAIR10
Match: AT4G19950.1 (unknown protein)

HSP 1 Score: 66.6 bits (161), Expect = 2.9e-11
Identity = 87/296 (29.39%), Postives = 124/296 (41.89%), Query Frame = 0


Query: 22  LKETITLIFTPTTIFAQIALAFILPLSLLIFTQSTHSPP--------------------- 81
           L+E+ ++       F  I L  I PLS  I   S  + P                     
Sbjct: 17  LRESTSIPQYSLKTFYLITLTLIFPLSFAILAHSLFTQPILAQIDTYPQADQSQLQHEWT 76

Query: 82  ----FNSLRSFFSAIFFFLSTSTAVYAAACIHADHDVSFRQVIAAAPKVCKRHFITFLCL 141
               F      F   F  LST+  V+  A ++    VSF   ++A P V KR FITFL +
Sbjct: 77  VLLVFQFCYIIFLFAFSLLSTAAVVFTVASLYTGKPVSFSSTMSAIPLVLKRLFITFLWV 136

Query: 142 LADFLAFNFFAVSAILLIFVISFLLNYERFEIFKAALILFLSAAAVYFALIWQIASVVSV 201
               LA+N   +                                  Y   +W +ASVVSV
Sbjct: 137 SLLMLAYNTVFLIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXYMTALWHLASVVSV 196

Query: 202 FETEAYGFEAIARSKELIEGK--MAIGLILLALIGSPFGLILF---VIR----YCVESAL 261
            E   YG  A+ +S EL++GK  MA  ++ + L+   F   +F   V+R    Y + + +
Sbjct: 197 LE-PIYGLAAMKKSYELLKGKTLMACSMVFIYLVHCGFIAGVFGAVVVRGGDDYGIFARI 256

Query: 262 VREGILGIVWMCSFVMFLLIGTVLYLVCKSYHCERIDESALCDCLRGYL----PLK 280
           V  G L  V +   ++ LL+ +V Y VCKS+H + ID+SAL D L GYL    PLK
Sbjct: 257 VAGGFLVGVLVIVNLIGLLVQSVFYYVCKSFHHQEIDKSALHDHLGGYLGEYVPLK 311

[Close]

BLAST of Carg26643 vs. TAIR10
Match: AT5G44860.1 (unknown protein)

HSP 1 Score: 59.7 bits (143), Expect = 3.5e-09
Identity = 88/297 (29.63%), Postives = 125/297 (42.09%), Query Frame = 0


Query: 22  LKETITL-IFTPTTIFAQIALAFILPLSLLIFTQSTHSPPFNS----------------- 81
           L+E+ T+  F+P T F  I L  I PLS  I   S  + P  +                 
Sbjct: 17  LRESTTIPKFSPKT-FYLITLTLIFPLSFAILAHSLFTQPILAQLDATPPSDQSKTNHEW 76

Query: 82  ----LRSFFSAIFFF----LSTSTAVYAAACIHADHDVSFRQVIAAAPKVCKRHFITFLC 141
               +  F   IF F    LST+  V+  A ++    VSF   ++A P V KR FITFL 
Sbjct: 77  TLLLIYQFIYVIFLFAFSLLSTAAVVFTVASLYTGKPVSFSSTMSAIPLVLKRLFITFLW 136

Query: 142 LLADFLAFNFFAVSAILLIFVISFLLNYERFEIFKAALILFLSAAAVYFALIWQIASVVS 201
           +                                      +      VY    W +ASVVS
Sbjct: 137 VSLMMXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFVLFLGVHVYMTAWWHLASVVS 196

Query: 202 VFETEAYGFEAIARSKELIEGK--MAIGLIL--LALIGSPFGLILFVI-----RYCVESA 261
           V E   YG  A+ +S EL+ G+  MA  ++   LAL G   G+   V+      + + + 
Sbjct: 197 VLE-PIYGIAAMKKSYELLNGRTNMACSMVFMYLALCGITAGVFGGVVVHGGDDFGLFTK 256

Query: 262 LVREGILGIVWMCSFVMFLLIGTVLYLVCKSYHCERIDESALCDCLRGYL----PLK 280
           +V  G L  + +   ++ LL+ +V Y VCKS+H + ID+SAL D L GYL    PLK
Sbjct: 257 IVVGGFLVGILVIVNLVGLLVQSVFYYVCKSFHHQPIDKSALHDHLGGYLGDYVPLK 311

[Close]

BLAST of Carg26643 vs. TrEMBL
Match: tr|A0A0A0LMI3|A0A0A0LMI3_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G404770 PE=4 SV=1)

HSP 1 Score: 223.4 bits (568), Expect = 6.7e-55
Identity = 151/295 (51.19%), Postives = 185/295 (62.71%), Query Frame = 0


Query: 10  KKNPQIFSFFFNLKETITLIFTPTTIFAQIALAFILPLSLLIFTQST--------HSPPF 69
           +K  Q    +    ET  LIFT   IF+QI LAFILPLSLLIFT S         HS  F
Sbjct: 5   QKKLQFLGIYGIFIETFRLIFTARVIFSQITLAFILPLSLLIFTLSQSSSNPWTFHSFSF 64

Query: 70  NSLRSFFSAIFFFLSTSTAVYAAACIHADHDVSFRQVIAAAPKVCKRHFITFLCLLADFL 129
           N                 AV++AAC   D  ++F  +I  APK+  +  +TFLCL+ DFL
Sbjct: 65  NFTLXXXXXXXXXXXXXXAVFSAACTFTDCRITFHHLILVAPKISIQLLVTFLCLIIDFL 124

Query: 130 AFNFFAVSAIL-LIFVISFLLNYERFEIFKAALILFLSAAAV-YFALIWQIASVVSVFET 189
           AFNF A+SA   +  +I  LLNYE  E     LIL L    + YF LIWQI+SVVSVFE 
Sbjct: 125 AFNFIALSATTPIAIMIPLLLNYEPMEFLTQFLILLLCIEMMFYFGLIWQISSVVSVFEA 184

Query: 190 EAYGFEAIARSKELIEGKMAIGLILLALIGSPFGLILFVIRY--CVESALVREGILGIVW 249
           ++YGFEAIARSKE+I+GKM +GLILL LI  P G+++FV+ Y   VESALVR GI+G VW
Sbjct: 185 DSYGFEAIARSKEVIKGKMMMGLILLILICFPVGVVVFVVHYGIVVESALVRVGIMGSVW 244

Query: 250 MCSFVMFLLIGTVLYLVCKSYHCERIDESALCDCLRGYLPL-----KVEDDDDYE 288
           + SF+MFLL GTVLYLVC+ +  ERI+ES L D L+GY P+     KVE D D E
Sbjct: 245 IYSFMMFLLSGTVLYLVCRLFKGERIEESTLSDHLQGYFPIKSEYVKVEGDSDIE 299

[Close]

BLAST of Carg26643 vs. TrEMBL
Match: tr|E5GB41|E5GB41_CUCME (Uncharacterized protein OS=Cucumis melo subsp. melo OX=412675 PE=4 SV=1)

HSP 1 Score: 216.1 bits (549), Expect = 1.1e-52
Identity = 150/296 (50.68%), Postives = 185/296 (62.50%), Query Frame = 0


Query: 10  KKNPQIFSFFFNLKETITLIFTPTTIFAQIALAFILPLSLLIFTQSTHSPPFNSLRSFFS 69
           +K  Q    +    ET  LIFT   IF+QI LAFILPLSLLIFT S  S P++S     S
Sbjct: 5   QKRLQFLGIYGIFIETFKLIFTARVIFSQITLAFILPLSLLIFTLSQSSNPWSS----HS 64

Query: 70  AIFFF-----------LSTSTAVYAAACIHADHDVSFRQVIAAAPKVCKRHFITFLCLLA 129
             F+F                          D  ++F  +I  APK+  +  +TFLCL+ 
Sbjct: 65  LSFYFXXXXXXXXXXXXXXXXXXXXXXXXFTDCQITFHHLILVAPKISMQLLVTFLCLII 124

Query: 130 DFLAFNFFAVSAILLI-FVISFLLNYERFEIFKAALILFLSAAAVYFALIWQIASVVSVF 189
           DFLAFNF A+ AI LI  VIS LL YE  E+    L+LFL     YF LIWQI+SVVSVF
Sbjct: 125 DFLAFNFIALPAITLIAIVISLLLIYEPLELLTQLLVLFLCIEVFYFGLIWQISSVVSVF 184

Query: 190 ETEAYGFEAIARSKELIEGKMAIGLILLALIGSPFGLILFVIRYCV-ESALVREGILGIV 249
           E ++YGFEAIA SKE+++GKM +  ILL LI  PFG+I+FV+ Y V ESALVR GILG V
Sbjct: 185 EADSYGFEAIATSKEVMKGKMMMASILLILICFPFGVIVFVLSYGVAESALVRVGILGNV 244

Query: 250 WMCSFVMFLLIGTVLYLVCKSYHCERIDESALCDCLRGYL-----PLKVEDDDDYE 288
           W+ SF+MFLL GTVLYLVCK ++ + IDESAL + L+GY       LKVEDD++ E
Sbjct: 245 WIYSFMMFLLSGTVLYLVCKLFNGQSIDESALSNHLQGYFQINFESLKVEDDNNIE 296

[Close]

BLAST of Carg26643 vs. TrEMBL
Match: tr|A0A1S3B3E2|A0A1S3B3E2_CUCME (uncharacterized protein LOC103485706 OS=Cucumis melo OX=3656 GN=LOC103485706 PE=4 SV=1)

HSP 1 Score: 178.3 bits (451), Expect = 2.5e-41
Identity = 112/184 (60.87%), Postives = 136/184 (73.91%), Query Frame = 0


Query: 111 ITFLCLLADFLAFNFFAVSAILLI-FVISFLLNYERFEIFKAALILFLSAAAVYFALIWQ 170
           +TFLCL+ DFLAFNF A+ AI LI  VIS LL YE  E+    L+LFL     YF LIWQ
Sbjct: 5   VTFLCLIIDFLAFNFIALPAITLIAIVISLLLIYEPLELLTQLLVLFLCIEVFYFGLIWQ 64

Query: 171 IASVVSVFETEAYGFEAIARSKELIEGKMAIGLILLALIGSPFGLILFVIRYCV-ESALV 230
           I+SVVSVFE ++YGFEAIA SKE+++GKM +  ILL LI  PFG+I+FV+ Y V ESALV
Sbjct: 65  ISSVVSVFEADSYGFEAIATSKEVMKGKMMMASILLILICFPFGVIVFVLSYGVAESALV 124

Query: 231 REGILGIVWMCSFVMFLLIGTVLYLVCKSYHCERIDESALCDCLRGYL-----PLKVEDD 288
           R GILG VW+ SF+MFLL GTVLYLVCK ++ + IDESAL + L+GY       LKVEDD
Sbjct: 125 RVGILGNVWIYSFMMFLLSGTVLYLVCKLFNGQSIDESALSNHLQGYFQINFESLKVEDD 184

[Close]

BLAST of Carg26643 vs. TrEMBL
Match: tr|A0A0A0KFW2|A0A0A0KFW2_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G398210 PE=4 SV=1)

HSP 1 Score: 139.0 bits (349), Expect = 1.7e-29
Identity = 124/333 (37.24%), Postives = 168/333 (50.45%), Query Frame = 0


Query: 11  KNPQIFSFFFNLKETITLIFTPTTIFAQIALAFILPLSLLIFT----------------- 70
           +N +    F  L ET  LI     IF QI L FILPLSLLIF                  
Sbjct: 7   ENLKFVGIFGILHETFKLISQWRKIFTQITLLFILPLSLLIFANNEVSKFFLQKISQEKT 66

Query: 71  ---QSTHSPP------------------FNSLRSFFSAIFFFLSTSTAVYAAACIHADHD 130
              Q+  S P                  FN     FS IF  LSTS  VY  ACI+A  D
Sbjct: 67  ILQQTQESTPQFLKLSHLISSQNLYYSLFNFAFLIFSPIFSLLSTSATVYTVACIYAARD 126

Query: 131 VSFRQVIAAAPKVCKRHFITFLCLLADFLAFNFFAVSAILLIFVISFL---LNYERFEIF 190
           +SF  V+A  PK+ K+  ITFLC LA   AF F A+  + LI +I+ L   LN  +  I 
Sbjct: 127 ISFTLVMAVLPKLWKQLLITFLCYLASIFAFTFVAIGVLCLIPLIAILIYGLNTGQDFIL 186

Query: 191 KAALILFLSAAAV-----YFALIWQIASVVSVFETEAYGFEAIARSKELIEGKMAIGLIL 250
              +I F    +      YF  IWQ++SVVSV E ++ GF+A+ +SK L++GKM + + L
Sbjct: 187 GNKIIFFFFIISYCIGIWYFTTIWQLSSVVSVLE-KSCGFKALEKSKNLLKGKMKMVIKL 246

Query: 251 LALIGSPFGLILFVI--RYCVESALVREGILGIVWMCSFVMFLLI----GTVLYLVCKSY 286
             L+  P G+I F +   +   S  V   ILGI W+ SF++F+L+     TV+Y VCK +
Sbjct: 247 WVLLDFPLGVIQFALLHYFVTRSTWVGWSILGICWVLSFMVFVLVKLVLETVVYFVCKLH 306

[Close]

BLAST of Carg26643 vs. TrEMBL
Match: tr|A0A1R3GDX5|A0A1R3GDX5_9ROSI (Uncharacterized protein OS=Corchorus olitorius OX=93759 GN=COLO4_35751 PE=4 SV=1)

HSP 1 Score: 129.0 bits (323), Expect = 1.7e-26
Identity = 115/326 (35.28%), Postives = 170/326 (52.15%), Query Frame = 0


Query: 7   NSLKKNPQIFSFFFNLKETITLIFTPTTIFAQIALAFILPLSLLIFT------------- 66
           NS ++  Q   FF  LKE+  +IF+   IF+QI LAFILPLS +                
Sbjct: 3   NSEQEELQSLGFFGILKESSKIIFSWRKIFSQITLAFILPLSFIFLAHIQISQFIFVDIL 62

Query: 67  ------QSTHSPPFNSLRS-----------FFSAIFF-------FLSTSTAVYAAACIHA 126
                 Q++   P++   S            F A +F        LST+  VY  ACI+ 
Sbjct: 63  RDQNALQNSAGTPYSDKLSGAVSSKWVAFWLFKAAYFIVFLVLALLSTAAVVYTVACIYT 122

Query: 127 DHDVSFRQVIAAAPKVCKRHFITFLCLLADFLAFNFFAVSAILLIFVISFL-LNYERFEI 186
             ++SF++V++  P+V KR  +TFL   A  L +NF AV  +LL  +I +L  +     I
Sbjct: 123 GKEISFKKVMSVVPRVWKRLIVTFLWSFAIVLVYNFVAVFCLLLPVLIIYLGFSNVGVAI 182

Query: 187 FKAALILFLSAAAVYFALIWQIASVVSVFETEAYGFEAIARSKELIEGKMAIGLILLALI 246
           F    +L+L A  +Y A++WQ+A VVSV E + YG +A+ +SK LI+GKM + L L  L+
Sbjct: 183 FVVLFLLYL-AGLIYIAVVWQLAGVVSVLE-DVYGIQAMKKSKALIKGKMGVALALFLLL 242

Query: 247 GSPFGLILFVIRYCVE-------SALVREGILGIVWMCSFVMFLLIG-TVLYLVCKSYHC 283
              FG+I  + ++ V           +  GIL ++ + + ++F L+  TVLY VCKS+H 
Sbjct: 243 ILCFGVIQTLFQFEVAFFWSLSVGMRILIGILCLLLLFNAILFGLVAKTVLYFVCKSHHH 302

The following BLAST results are available for this feature:

BLAST of Carg26643 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022936738.1	4.1e-88	71.23	uncharacterized protein LOC111443242 [Cucurbita moschata]	[more]
XP_023535684.1	6.5e-86	69.12	uncharacterized protein LOC111797045 [Cucurbita pepo subsp. pepo]	[more]
KGN63125.1	1.0e-54	51.19	hypothetical protein Csa_2G404770 [Cucumis sativus]	[more]
ADN33683.1	1.6e-52	50.68	hypothetical protein [Cucumis melo subsp. melo]	[more]
XP_008441626.1	3.8e-41	60.87	PREDICTED: uncharacterized protein LOC103485706 [Cucumis melo]	[more]

BLAST of Carg26643 vs. TAIR10


Match Name	E-value	Identity	Description
AT1G31130.1	4.9e-19	34.88	unknown protein	[more]
AT4G19950.1	2.9e-11	29.39	unknown protein	[more]
AT5G44860.1	3.5e-09	29.63	unknown protein	[more]

BLAST of Carg26643 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of Carg26643 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A0A0LMI3\|A0A0A0LMI3_CUCSA	6.7e-55	51.19	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G404770 PE=4 SV=1	[more]
tr\|E5GB41\|E5GB41_CUCME	1.1e-52	50.68	Uncharacterized protein OS=Cucumis melo subsp. melo OX=412675 PE=4 SV=1	[more]
tr\|A0A1S3B3E2\|A0A1S3B3E2_CUCME	2.5e-41	60.87	uncharacterized protein LOC103485706 OS=Cucumis melo OX=3656 GN=LOC103485706 PE=...	[more]
tr\|A0A0A0KFW2\|A0A0A0KFW2_CUCSA	1.7e-29	37.24	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G398210 PE=4 SV=1	[more]
tr\|A0A1R3GDX5\|A0A1R3GDX5_9ROSI	1.7e-26	35.28	Uncharacterized protein OS=Corchorus olitorius OX=93759 GN=COLO4_35751 PE=4 SV=1	[more]

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg26643-RA	Carg26643-RA	mRNA

InterPro

Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR33133:SF5	SUBFAMILY NOT NAMED	coord: 62..280
None	No IPR available	PANTHER	PTHR33133	FAMILY NOT NAMED	coord: 62..280

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Carg26643	CmaCh01G010230	Cucurbita maxima (Rimu)	carcmaB0844
Carg26643	CmoCh09G010710	Cucurbita moschata (Rifu)	carcmoB0821
Carg26643	CmoCh01G010650	Cucurbita moschata (Rifu)	carcmoB0822
Carg26643	Cp4.1LG02g00090	Cucurbita pepo (Zucchini)	carcpeB0855
Carg26643	Bhi04G001723	Wax gourd	carwgoB0718

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:

None