Carg26586 (gene) Silver-seed gourd | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Carg26586
Type	gene
Organism	Cucurbita argyrosperma (Silver-seed gourd)
Description	Ribulose bisphosphate carboxylase/oxygenase activase
Location	Cucurbita_argyrosperma_scaffold_420 : 24680 .. 27543 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

AACTTCACTGCTTCACACCCATAAGCCCTTAATCCATGGCTACCACGGTTCCAACCATTGGAGCTTTTAATAGAACATCGGTACTATTTCTTCCTACCTTTAGCTTCAGTACATCTTTTGGGTTGTTTGATGGAGAATAGATTCAATTTGTTGAATAATTTATTCTTTTCTCTCTGGGGTTTATCTTTCAATCATGAATGTCATTGTAATTTAAAGCTTCACACGTTGCAAAATATGGAGGATTTCGTTGTCATTATAACTTGTATAAAAGAATGGAAGTAAGGTGATCCTCATCATCCTATCATTAATCCTATGCAGTTAAACAACAGTAACTATGGAGGTTTAGTTCCAAACTCTACGTTTTTCGGCAGCAGGTTGAAGAATTTCAGTTCCAGATTCACCACCACCTCAAATATGGTGACTGGGAACTTCAAGATTGTTGCCGAGTATGATGAGGAGAAGCAGACCGAGAAGGACAAATGGCAAGGCCTTGCTTTCGATACATCTGATGACCAGCAAGACATTGCCAGAGGGAAGGGATTGGCAGATCCTCTTTTTCAAGCTCCCATGGGGACAGGAACTCACAATGCTATCATGAGTTCATATGAATACATTAGCGCTGGACTTCGGCAGTATGTGTTAATATAGAATTTTGCAGTTGAGTTGGAGATTCTTGTTCTAGTTTACTTATAGTATCACATTCTTTCAGATACAACCTCGACAATAATGTGGATGGATTTTACATAGCTCCAGCATTCATGGACAAACTTGTGGTTCACATCGTCAAGAACTTCATGAGCCTGCCAAACATTAAGGTTAAAAATACGGTTGACACATGATATAGTTCTGGTTTGTCTTCCATTGCTAACTTGCCAATCTTCTTGGATACATTTAGGTTCCTCTCATTCTTGGTATTTGGGGAGGTAAAGGTCAAGGAAAGTCTTTCCAGTGTGAACTTGTATTTGCCAAGATGGGAATCAAGTGAGTTCAAGACCCAGCTAGTTCTAAGTTAATTCTTTGGAGGGTTCAAGTATAATATACACATTCCTTATTCTCTGAAACTGTTAGGGTCTTAATTTTGTTTAGTTATGATGAAATTTCAGCCCTATTATGATGAGTGCTGGGGAATTAGAAAGTGGGAATGCTGGAGAGCCTGCAAAATTGATCAGGCAAAGATATAGAGAGGCTGCTGATATCATCAAGAAAGGGAAAATGTGTTGCCTTTTAATCAATGATCTTGATGCTGGAGCTGGAAGGTTTGGTGGGACTACCCAGTACACAGTGAACAATCAGATGGTAAATGCTACTCTTATGAACATTGCTGACAACCCAACTAATGTGCAGCTGCCAGGCTTGTATAACAAAGAAGAAAATCCCAGAGTTCCCATCATAGTAACTGGTAATGACTTCTCAACATTATACGCCCCCCTCATTCGTGACGGTCGTATGGAGAAGTTCTATTGGGCTCCAACTCATGATGATTGTATTGGTATTTGCACTGGAATATTTAGGACTGACAGTGTGCCTATAGAGGACATTGTCAAACTCGTCGACACCTTCCCGGGGCAGTCGATCGGTAAGCTTCACAAACTTAGGGTAGCTGTAACCAAGCATTTCTCAATGGAAGAAGAATATTTGCCTGCATAAACCAATCACAGTATAAATTCTTAATGGAGTAGTTCAGTTGAGTTGATTGTAAATGATCTTCTTTTACAGACGTGTAGCATCATTTAGAAGTTTTGGAACTGTTTTTGCAGACTTCTTTGGTGCGTTGAGAGCTCGAGTTTATGATGACGAAGTTAGAAAGTGGGCTGCCGGCGTTGGGGTTGAGAGAATCGGAAAAAGTCTTGTTAACTCAAAGGAAGGTCCCCCAACTTTTGATCAACCAAAAATGACACTCGAAAAGCTTCTCGAATATGGCAACATGCTCATCAAGGAACAGGAGAATGTGAAGAGAGTTAAACTGGCTGAGAAGTATTTAAAAGAAGCTGCTCTTGGAGATGCAAATGAGGATGTTCTTGAGTTTCAAACTTCTCTGGGTAAGTAACTCTTACATTCAAAGTTGTCTTGATCATTAGTTTAATGATATTTAATTTAAATTAATTATTCTTTTTTGAAAATTTTGCACAAACCACTCGTGAACGATGAGATTTGATTGTCATTTGTTACCATCATACCCTTTTACTTTTAATTTGATTAGTCAGTCATGTAATGTGTTAAGTGTTGCAATCAACTCCTTTTTGTTCGCTAAATGTTAGAATCAACCCCTTAAACTTAACAAGTCATGAACGATGAGATTTGTTACAATCATACCCTTTTACTTTTAATTTGATTAGTCAATCGTGTACTGTGTTAAGTGTTGCAATCAACTCCTTTTTGTTCGTTAAATGTTAGAATCAACCCCTTAAACTTAACAAGTCATGAACGATGAGATTTGTTACAATCATACCCTTTTACTTTTAATTTGATTAGTCAATCGTGTACTGTGTTAAGTGTTGCAATCAACTCCTTTTTATTCGTTAAATGTTAGAATCAACCCCTTAAACTTAACAAGTCATGAACGATGAGATTTGTTACAATCATACCCTTTTACTTTTAATTTGATTAGTCAGTCGTGTACTGTGTTAAGTGTTGCAATCAATTCCTCCCCTAGAACTTAACAAGGTTGGACGTGGTTGATTAACAAGGTAGTAGGTGGTAGGTGACTTTTACATTTTTCTTTTGAACTTTTAATTTACAGTAATCATTTTTCTTTTTTTTTTTTTCTCAATTTTGAAGATTCAATGGGGAAAGAGCAACGCAACAGGTTAACATCACTGTTCCTGAAGGCTGTGCAGATTCATCTGCTAAAAACTGAGTCCTAA

mRNA sequence

AACTTCACTGCTTCACACCCATAAGCCCTTAATCCATGGCTACCACGGTTCCAACCATTGGAGCTTTTAATAGAACATCGTTAAACAACAGTAACTATGGAGGTTTAGTTCCAAACTCTACGTTTTTCGGCAGCAGGTTGAAGAATTTCAGTTCCAGATTCACCACCACCTCAAATATGGTGACTGGGAACTTCAAGATTGTTGCCGAGTATGATGAGGAGAAGCAGACCGAGAAGGACAAATGGCAAGGCCTTGCTTTCGATACATCTGATGACCAGCAAGACATTGCCAGAGGGAAGGGATTGGCAGATCCTCTTTTTCAAGCTCCCATGGGGACAGGAACTCACAATGCTATCATGAGTTCATATGAATACATTAGCGCTGGACTTCGGCAATACAACCTCGACAATAATGTGGATGGATTTTACATAGCTCCAGCATTCATGGACAAACTTGTGGTTCACATCGTCAAGAACTTCATGAGCCTGCCAAACATTAAGGTTCCTCTCATTCTTGGTATTTGGGGAGGTAAAGGTCAAGGAAAGTCTTTCCAGTGTGAACTTGTATTTGCCAAGATGGGAATCAACCCTATTATGATGAGTGCTGGGGAATTAGAAAGTGGGAATGCTGGAGAGCCTGCAAAATTGATCAGGCAAAGATATAGAGAGGCTGCTGATATCATCAAGAAAGGGAAAATGTGTTGCCTTTTAATCAATGATCTTGATGCTGGAGCTGGAAGGTTTGGTGGGACTACCCAGTACACAGTGAACAATCAGATGGTAAATGCTACTCTTATGAACATTGCTGACAACCCAACTAATGTGCAGCTGCCAGGCTTGTATAACAAAGAAGAAAATCCCAGAGTTCCCATCATAGTAACTGGTAATGACTTCTCAACATTATACGCCCCCCTCATTCGTGACGGTCGTATGGAGAAGTTCTATTGGGCTCCAACTCATGATGATTGTATTGGTATTTGCACTGGAATATTTAGGACTGACAGTGTGCCTATAGAGGACATTGTCAAACTCGTCGACACCTTCCCGGGGCAGTCGATCGACTTCTTTGGTGCGTTGAGAGCTCGAGTTTATGATGACGAAGTTAGAAAGTGGGCTGCCGGCGTTGGGGTTGAGAGAATCGGAAAAAGTCTTGTTAACTCAAAGGAAGGTCCCCCAACTTTTGATCAACCAAAAATGACACTCGAAAAGCTTCTCGAATATGGCAACATGCTCATCAAGGAACAGGAGAATGTGAAGAGAGTTAAACTGGCTGAGAAGTATTTAAAAGAAGCTGCTCTTGGAGATGCAAATGAGGATGTTCTTGAGTTTCAAACTTCTCTGGATTCAATGGGGAAAGAGCAACGCAACAGGTTAACATCACTGTTCCTGAAGGCTGTGCAGATTCATCTGCTAAAAACTGAGTCCTAA

Coding sequence (CDS)

ATGGCTACCACGGTTCCAACCATTGGAGCTTTTAATAGAACATCGTTAAACAACAGTAACTATGGAGGTTTAGTTCCAAACTCTACGTTTTTCGGCAGCAGGTTGAAGAATTTCAGTTCCAGATTCACCACCACCTCAAATATGGTGACTGGGAACTTCAAGATTGTTGCCGAGTATGATGAGGAGAAGCAGACCGAGAAGGACAAATGGCAAGGCCTTGCTTTCGATACATCTGATGACCAGCAAGACATTGCCAGAGGGAAGGGATTGGCAGATCCTCTTTTTCAAGCTCCCATGGGGACAGGAACTCACAATGCTATCATGAGTTCATATGAATACATTAGCGCTGGACTTCGGCAATACAACCTCGACAATAATGTGGATGGATTTTACATAGCTCCAGCATTCATGGACAAACTTGTGGTTCACATCGTCAAGAACTTCATGAGCCTGCCAAACATTAAGGTTCCTCTCATTCTTGGTATTTGGGGAGGTAAAGGTCAAGGAAAGTCTTTCCAGTGTGAACTTGTATTTGCCAAGATGGGAATCAACCCTATTATGATGAGTGCTGGGGAATTAGAAAGTGGGAATGCTGGAGAGCCTGCAAAATTGATCAGGCAAAGATATAGAGAGGCTGCTGATATCATCAAGAAAGGGAAAATGTGTTGCCTTTTAATCAATGATCTTGATGCTGGAGCTGGAAGGTTTGGTGGGACTACCCAGTACACAGTGAACAATCAGATGGTAAATGCTACTCTTATGAACATTGCTGACAACCCAACTAATGTGCAGCTGCCAGGCTTGTATAACAAAGAAGAAAATCCCAGAGTTCCCATCATAGTAACTGGTAATGACTTCTCAACATTATACGCCCCCCTCATTCGTGACGGTCGTATGGAGAAGTTCTATTGGGCTCCAACTCATGATGATTGTATTGGTATTTGCACTGGAATATTTAGGACTGACAGTGTGCCTATAGAGGACATTGTCAAACTCGTCGACACCTTCCCGGGGCAGTCGATCGACTTCTTTGGTGCGTTGAGAGCTCGAGTTTATGATGACGAAGTTAGAAAGTGGGCTGCCGGCGTTGGGGTTGAGAGAATCGGAAAAAGTCTTGTTAACTCAAAGGAAGGTCCCCCAACTTTTGATCAACCAAAAATGACACTCGAAAAGCTTCTCGAATATGGCAACATGCTCATCAAGGAACAGGAGAATGTGAAGAGAGTTAAACTGGCTGAGAAGTATTTAAAAGAAGCTGCTCTTGGAGATGCAAATGAGGATGTTCTTGAGTTTCAAACTTCTCTGGATTCAATGGGGAAAGAGCAACGCAACAGGTTAACATCACTGTTCCTGAAGGCTGTGCAGATTCATCTGCTAAAAACTGAGTCCTAA

Protein sequence

MATTVPTIGAFNRTSLNNSNYGGLVPNSTFFGSRLKNFSSRFTTTSNMVTGNFKIVAEYDEEKQTEKDKWQGLAFDTSDDQQDIARGKGLADPLFQAPMGTGTHNAIMSSYEYISAGLRQYNLDNNVDGFYIAPAFMDKLVVHIVKNFMSLPNIKVPLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAADIIKKGKMCCLLINDLDAGAGRFGGTTQYTVNNQMVNATLMNIADNPTNVQLPGLYNKEENPRVPIIVTGNDFSTLYAPLIRDGRMEKFYWAPTHDDCIGICTGIFRTDSVPIEDIVKLVDTFPGQSIDFFGALRARVYDDEVRKWAAGVGVERIGKSLVNSKEGPPTFDQPKMTLEKLLEYGNMLIKEQENVKRVKLAEKYLKEAALGDANEDVLEFQTSLDSMGKEQRNRLTSLFLKAVQIHLLKTES

Homology

[Close]

BLAST of Carg26586 vs. NCBI nr
Match: XP_023532228.1 (ribulose bisphosphate carboxylase/oxygenase activase, chloroplastic-like isoform X1 [Cucurbita pepo subsp. pepo] >XP_023532229.1 ribulose bisphosphate carboxylase/oxygenase activase, chloroplastic-like isoform X1 [Cucurbita pepo subsp. pepo] >XP_023532230.1 ribulose bisphosphate carboxylase/oxygenase activase, chloroplastic-like isoform X2 [Cucurbita pepo subsp. pepo] >XP_023532231.1 ribulose bisphosphate carboxylase/oxygenase activase, chloroplastic-like isoform X1 [Cucurbita pepo subsp. pepo] >XP_023532232.1 ribulose bisphosphate carboxylase/oxygenase activase, chloroplastic-like isoform X1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 907.1 bits (2343), Expect = 2.4e-260
Identity = 451/463 (97.41%), Postives = 455/463 (98.27%), Query Frame = 0


Query: 1   MATTVPTIGAFNRTSLNNSNYGGLVPNSTFFGSRLKNFSSRFTTTSNMVTGNFKIVAEYD 60
           MATTV TIGA NRTSLNNSNYG LVPNS F G RLKNFSSRFTTTSNMV GNFKIVAEYD
Sbjct: 1   MATTVATIGAVNRTSLNNSNYGDLVPNSAFLGRRLKNFSSRFTTTSNMVIGNFKIVAEYD 60

Query: 61  EEKQTEKDKWQGLAFDTSDDQQDIARGKGLADPLFQAPMGTGTHNAIMSSYEYISAGLRQ 120
           EEKQTEKDKW+GLAFDTSDDQQDIARGKGLADPLFQAPMGTGTHNAIMSSYEYISAGLRQ
Sbjct: 61  EEKQTEKDKWRGLAFDTSDDQQDIARGKGLADPLFQAPMGTGTHNAIMSSYEYISAGLRQ 120

Query: 121 YNLDNNVDGFYIAPAFMDKLVVHIVKNFMSLPNIKVPLILGIWGGKGQGKSFQCELVFAK 180
           YNLDNNVDGFYIAPAFMDKLVVHIVKNFMSLPNIKVPLILGIWGGKGQGKSFQCELVFAK
Sbjct: 121 YNLDNNVDGFYIAPAFMDKLVVHIVKNFMSLPNIKVPLILGIWGGKGQGKSFQCELVFAK 180

Query: 181 MGINPIMMSAGELESGNAGEPAKLIRQRYREAADIIKKGKMCCLLINDLDAGAGRFGGTT 240
           MGINPIMMSAGELESGNAGEPAKLIRQRYREAAD+IKKGKMCCLLINDLDAGAGRFGGTT
Sbjct: 181 MGINPIMMSAGELESGNAGEPAKLIRQRYREAADLIKKGKMCCLLINDLDAGAGRFGGTT 240

Query: 241 QYTVNNQMVNATLMNIADNPTNVQLPGLYNKEENPRVPIIVTGNDFSTLYAPLIRDGRME 300
           QYTVNNQMVNATLMNIADNPTNVQLPGLYNKEENPRVPIIVTGNDFSTLYAPLIRDGRME
Sbjct: 241 QYTVNNQMVNATLMNIADNPTNVQLPGLYNKEENPRVPIIVTGNDFSTLYAPLIRDGRME 300

Query: 301 KFYWAPTHDDCIGICTGIFRTDSVPIEDIVKLVDTFPGQSIDFFGALRARVYDDEVRKWA 360
           KFYWAPTH+DCIGICTGIFRTD VPIEDIVKLVDTFPGQSIDFFGALRARVYDDEVRKWA
Sbjct: 301 KFYWAPTHEDCIGICTGIFRTDGVPIEDIVKLVDTFPGQSIDFFGALRARVYDDEVRKWA 360

Query: 361 AGVGVERIGKSLVNSKEGPPTFDQPKMTLEKLLEYGNMLIKEQENVKRVKLAEKYLKEAA 420
           AGVGVERIGKSLVNSKEGPPTFDQPKMTLEKLLEYGNMLIKEQENVKRVKLAEKYLKEAA
Sbjct: 361 AGVGVERIGKSLVNSKEGPPTFDQPKMTLEKLLEYGNMLIKEQENVKRVKLAEKYLKEAA 420

Query: 421 LGDANEDVLEFQTSLDSMGKEQRNRLTSLFLKAVQIHLLKTES 464
           LGDANEDVL+FQTSLDSMGKEQRNRLTSLFLKAVQIHLLKTES
Sbjct: 421 LGDANEDVLQFQTSLDSMGKEQRNRLTSLFLKAVQIHLLKTES 463

[Close]

BLAST of Carg26586 vs. NCBI nr
Match: XP_022947286.1 (ribulose bisphosphate carboxylase/oxygenase activase, chloroplastic-like [Cucurbita moschata] >XP_022947287.1 ribulose bisphosphate carboxylase/oxygenase activase, chloroplastic-like [Cucurbita moschata] >XP_022947288.1 ribulose bisphosphate carboxylase/oxygenase activase, chloroplastic-like [Cucurbita moschata] >XP_022947289.1 ribulose bisphosphate carboxylase/oxygenase activase, chloroplastic-like [Cucurbita moschata] >XP_022947290.1 ribulose bisphosphate carboxylase/oxygenase activase, chloroplastic-like [Cucurbita moschata])

HSP 1 Score: 904.0 bits (2335), Expect = 2.0e-259
Identity = 452/463 (97.62%), Postives = 455/463 (98.27%), Query Frame = 0


Query: 1   MATTVPTIGAFNRTSLNNSNYGGLVPNSTFFGSRLKNFSSRFTTTSNMVTGNFKIVAEYD 60
           MATTV TIGA NRTSLNNSNYGGLVPNS F G RLKNFSSRF TTSNMV GNFKIVAEYD
Sbjct: 1   MATTVATIGAVNRTSLNNSNYGGLVPNSAFLGRRLKNFSSRF-TTSNMVIGNFKIVAEYD 60

Query: 61  EEKQTEKDKWQGLAFDTSDDQQDIARGKGLADPLFQAPMGTGTHNAIMSSYEYISAGLRQ 120
           EEKQTEKDKW+GLAFDTSDDQQDIARGKGLADPLFQAPMGTGTHNAIMSSYEYISAGLRQ
Sbjct: 61  EEKQTEKDKWRGLAFDTSDDQQDIARGKGLADPLFQAPMGTGTHNAIMSSYEYISAGLRQ 120

Query: 121 YNLDNNVDGFYIAPAFMDKLVVHIVKNFMSLPNIKVPLILGIWGGKGQGKSFQCELVFAK 180
           YNLDNNVDGFYIAPAFMDKLVVHIVKNFMSLPNIKVPLILGIWGGKGQGKSFQCELVFAK
Sbjct: 121 YNLDNNVDGFYIAPAFMDKLVVHIVKNFMSLPNIKVPLILGIWGGKGQGKSFQCELVFAK 180

Query: 181 MGINPIMMSAGELESGNAGEPAKLIRQRYREAADIIKKGKMCCLLINDLDAGAGRFGGTT 240
           MGINPIMMSAGELESGNAGEPAKLIRQRYREAADIIKKGKMCCLLINDLDAGAGRFGGTT
Sbjct: 181 MGINPIMMSAGELESGNAGEPAKLIRQRYREAADIIKKGKMCCLLINDLDAGAGRFGGTT 240

Query: 241 QYTVNNQMVNATLMNIADNPTNVQLPGLYNKEENPRVPIIVTGNDFSTLYAPLIRDGRME 300
           QYTVNNQMVNATLMNIADNPTNVQLPGLYNKEENPRVPIIVTGNDFSTLYAPLIRDGRME
Sbjct: 241 QYTVNNQMVNATLMNIADNPTNVQLPGLYNKEENPRVPIIVTGNDFSTLYAPLIRDGRME 300

Query: 301 KFYWAPTHDDCIGICTGIFRTDSVPIEDIVKLVDTFPGQSIDFFGALRARVYDDEVRKWA 360
           KFYWAPTH+DCIGICTGIFRTD VPIEDIVKLVDTFPGQSIDFFGALRARVYDDEVRKWA
Sbjct: 301 KFYWAPTHEDCIGICTGIFRTDGVPIEDIVKLVDTFPGQSIDFFGALRARVYDDEVRKWA 360

Query: 361 AGVGVERIGKSLVNSKEGPPTFDQPKMTLEKLLEYGNMLIKEQENVKRVKLAEKYLKEAA 420
           AGVGVERIGKSLVNSKEGPPTFDQPKMTLEKLLEYGNMLIKEQENVKRVKLAEKYLKEAA
Sbjct: 361 AGVGVERIGKSLVNSKEGPPTFDQPKMTLEKLLEYGNMLIKEQENVKRVKLAEKYLKEAA 420

Query: 421 LGDANEDVLEFQTSLDSMGKEQRNRLTSLFLKAVQIHLLKTES 464
           LGDANEDVL+FQTSLDSMGKEQRNRLTSLFLKAVQIHLLKTES
Sbjct: 421 LGDANEDVLQFQTSLDSMGKEQRNRLTSLFLKAVQIHLLKTES 462

[Close]

BLAST of Carg26586 vs. NCBI nr
Match: XP_023007005.1 (ribulose bisphosphate carboxylase/oxygenase activase, chloroplastic-like [Cucurbita maxima] >XP_023007006.1 ribulose bisphosphate carboxylase/oxygenase activase, chloroplastic-like [Cucurbita maxima] >XP_023007007.1 ribulose bisphosphate carboxylase/oxygenase activase, chloroplastic-like [Cucurbita maxima] >XP_023007008.1 ribulose bisphosphate carboxylase/oxygenase activase, chloroplastic-like [Cucurbita maxima])

HSP 1 Score: 894.4 bits (2310), Expect = 1.6e-256
Identity = 444/463 (95.90%), Postives = 451/463 (97.41%), Query Frame = 0


Query: 1   MATTVPTIGAFNRTSLNNSNYGGLVPNSTFFGSRLKNFSSRFTTTSNMVTGNFKIVAEYD 60
           MATTV TIGA NRT LNNSNYGGLVPNS F G R+KNFSSRFTTTSNMV GNFKIVAEYD
Sbjct: 1   MATTVATIGAVNRTLLNNSNYGGLVPNSAFLGRRMKNFSSRFTTTSNMVIGNFKIVAEYD 60

Query: 61  EEKQTEKDKWQGLAFDTSDDQQDIARGKGLADPLFQAPMGTGTHNAIMSSYEYISAGLRQ 120
           EEKQTEKDKW+GLAFDTSDDQQDIARGKGLADPLFQAPMGTGTHNAIMSSYEYISAGLRQ
Sbjct: 61  EEKQTEKDKWRGLAFDTSDDQQDIARGKGLADPLFQAPMGTGTHNAIMSSYEYISAGLRQ 120

Query: 121 YNLDNNVDGFYIAPAFMDKLVVHIVKNFMSLPNIKVPLILGIWGGKGQGKSFQCELVFAK 180
           YNLDNNVDGFYIAPAFMDKLVVHIVKNF+SLPNIKVPLILGIWGGKGQGKSFQCELVFAK
Sbjct: 121 YNLDNNVDGFYIAPAFMDKLVVHIVKNFISLPNIKVPLILGIWGGKGQGKSFQCELVFAK 180

Query: 181 MGINPIMMSAGELESGNAGEPAKLIRQRYREAADIIKKGKMCCLLINDLDAGAGRFGGTT 240
           MGINPIMMSAGELESGNAGEPAKLIRQRYREAAD+IKKGKMCCLLINDLDAGAGRFGGTT
Sbjct: 181 MGINPIMMSAGELESGNAGEPAKLIRQRYREAADLIKKGKMCCLLINDLDAGAGRFGGTT 240

Query: 241 QYTVNNQMVNATLMNIADNPTNVQLPGLYNKEENPRVPIIVTGNDFSTLYAPLIRDGRME 300
           QYTVNNQMVNATLMNIADNPTNVQLPGLYNKEENPRVPIIVTGNDFSTLYAPLIRDGRME
Sbjct: 241 QYTVNNQMVNATLMNIADNPTNVQLPGLYNKEENPRVPIIVTGNDFSTLYAPLIRDGRME 300

Query: 301 KFYWAPTHDDCIGICTGIFRTDSVPIEDIVKLVDTFPGQSIDFFGALRARVYDDEVRKWA 360
           KFYWAPTH+DCIGICTGIFRTD VP EDIVKLV TFPGQSIDFFGALRARVYDDEVRKWA
Sbjct: 301 KFYWAPTHEDCIGICTGIFRTDGVPKEDIVKLVGTFPGQSIDFFGALRARVYDDEVRKWA 360

Query: 361 AGVGVERIGKSLVNSKEGPPTFDQPKMTLEKLLEYGNMLIKEQENVKRVKLAEKYLKEAA 420
           AGVGVERIGKSLVNSKEGPPTFDQPKMTLEKLLEYGNMLIKEQENV RVKLAEKYLKEAA
Sbjct: 361 AGVGVERIGKSLVNSKEGPPTFDQPKMTLEKLLEYGNMLIKEQENVMRVKLAEKYLKEAA 420

Query: 421 LGDANEDVLEFQTSLDSMGKEQRNRLTSLFLKAVQIHLLKTES 464
           LGDANEDV +FQTSLDSMG+EQRNRLTSLFLKAVQIHLLKTES
Sbjct: 421 LGDANEDVFQFQTSLDSMGEEQRNRLTSLFLKAVQIHLLKTES 463

[Close]

BLAST of Carg26586 vs. NCBI nr
Match: XP_023512815.1 (ribulose bisphosphate carboxylase/oxygenase activase, chloroplastic isoform X9 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 812.8 bits (2098), Expect = 6.1e-232
Identity = 413/510 (80.98%), Postives = 438/510 (85.88%), Query Frame = 0


Query: 1   MATTVPTIGAFNRTSLNNSNYGGLVPNSTFFGSRLKNFSSRFTTTSNMVTGNFKIVAEYD 60
           MA TV TIGA NRT+LNNSNYGGLVPNS F GSRLK  +S  +TTS MV GNFK+VAEY+
Sbjct: 1   MAATVSTIGAVNRTTLNNSNYGGLVPNSAFLGSRLK--ASSRSTTSKMVIGNFKVVAEYN 60

Query: 61  EEKQTEKDKWQGLAFDTSDDQQDIARGKGLADPLFQAPMGTGTHNAIMSSYEYISAGLRQ 120
           EEKQTEKDKW+GLAFDTSDDQQDI RGKGLADPLFQAPMGTGTHNA++SSYEY+SAGLRQ
Sbjct: 61  EEKQTEKDKWRGLAFDTSDDQQDITRGKGLADPLFQAPMGTGTHNAVLSSYEYVSAGLRQ 120

Query: 121 YNLDNNVDGFYIAPAFMDKLVVHIVKNFMSLPNIKVPLILGIWGGKGQGKSFQCELVFAK 180
           YN DNN+DGFYIAPAFMDKL+VHIVKNFM+LPNIKVPLILGIWGGKGQGKSFQCELVFAK
Sbjct: 121 YNFDNNMDGFYIAPAFMDKLMVHIVKNFMNLPNIKVPLILGIWGGKGQGKSFQCELVFAK 180

Query: 181 MGINPIMMSAGELESGNAGEPAKLIRQRYREAADIIKKGKMCCLLINDLDAGAGRFGGTT 240
           MGINPIMMSAGELESGNAGEPAKLIRQRYREAADIIKKGKM CL INDLDAGAGRFGG T
Sbjct: 181 MGINPIMMSAGELESGNAGEPAKLIRQRYREAADIIKKGKMSCLFINDLDAGAGRFGGAT 240

Query: 241 QYTVNNQMVNATLMNIADNPTNVQLPGLYNKEENPRVPIIVTGNDFSTLYAPLIRDGRME 300
           QYTVNNQMVNATLMNIADNPTNVQLPGLYNKEENPRVPIIVTGNDFSTLYAPLIRDGRM+
Sbjct: 241 QYTVNNQMVNATLMNIADNPTNVQLPGLYNKEENPRVPIIVTGNDFSTLYAPLIRDGRMD 300

Query: 301 KFYWAPTHDDCIGICTGIFRTDSVPIEDIVKLVDTFPGQSIDFFGALRARVYDDEVRKWA 360
           KFYWAPT +D IGICTGIFRTD VP EDIVKLVDTFPGQSIDFFGALRARVYD+EVRKWA
Sbjct: 301 KFYWAPTREDRIGICTGIFRTDGVPTEDIVKLVDTFPGQSIDFFGALRARVYDNEVRKWA 360

Query: 361 AGVGVERIGKSLVNSKEGPPTFDQPKMTLEKLLEYGNMLIKEQENVKRVKLAEKYLKEAA 420
           AGVGVE IGK+LVNSKEGPPTF+QPKMTLEKLLEYGNMLI EQENVKRVKLA+KYLKEAA
Sbjct: 361 AGVGVESIGKNLVNSKEGPPTFNQPKMTLEKLLEYGNMLIMEQENVKRVKLADKYLKEAA 420

Query: 421 LGDANEDVLEFQTS---------------------------------------------- 464
           LGDANEDV++F+TS                                              
Sbjct: 421 LGDANEDVVQFETSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVXXXXXXXXXXXXX 480

[Close]

BLAST of Carg26586 vs. NCBI nr
Match: XP_022986816.1 (ribulose bisphosphate carboxylase/oxygenase activase, chloroplastic isoform X10 [Cucurbita maxima])

HSP 1 Score: 811.6 bits (2095), Expect = 1.4e-231
Identity = 413/510 (80.98%), Postives = 437/510 (85.69%), Query Frame = 0


Query: 1   MATTVPTIGAFNRTSLNNSNYGGLVPNSTFFGSRLKNFSSRFTTTSNMVTGNFKIVAEYD 60
           MA TV T+GA NRT+LNNSNYGGLVPNS F GSRLK  S   +TTS MV GNFKIVAEY+
Sbjct: 1   MAATVSTVGAVNRTTLNNSNYGGLVPNSAFLGSRLKVSSK--STTSKMVIGNFKIVAEYN 60

Query: 61  EEKQTEKDKWQGLAFDTSDDQQDIARGKGLADPLFQAPMGTGTHNAIMSSYEYISAGLRQ 120
           EEKQTEKDKW+GLAFDTSDDQQDI RGKGLADPLFQAPMGTGTHNA++SSYEY+SAGLRQ
Sbjct: 61  EEKQTEKDKWRGLAFDTSDDQQDITRGKGLADPLFQAPMGTGTHNAVLSSYEYVSAGLRQ 120

Query: 121 YNLDNNVDGFYIAPAFMDKLVVHIVKNFMSLPNIKVPLILGIWGGKGQGKSFQCELVFAK 180
           YN DNN+DGFYIAPAFMDKL+VHIVKNFM+LPNIKVPLILGIWGGKGQGKSFQCELVFAK
Sbjct: 121 YNFDNNMDGFYIAPAFMDKLMVHIVKNFMNLPNIKVPLILGIWGGKGQGKSFQCELVFAK 180

Query: 181 MGINPIMMSAGELESGNAGEPAKLIRQRYREAADIIKKGKMCCLLINDLDAGAGRFGGTT 240
           MGINPIMMSAGELESGNAGEPAKLIRQRYREAADIIKKGKM CL INDLDAGAGRFGG T
Sbjct: 181 MGINPIMMSAGELESGNAGEPAKLIRQRYREAADIIKKGKMSCLFINDLDAGAGRFGGAT 240

Query: 241 QYTVNNQMVNATLMNIADNPTNVQLPGLYNKEENPRVPIIVTGNDFSTLYAPLIRDGRME 300
           QYTVNNQMVNATLMNIADNPTNVQLPGLYNKEENPRVPIIVTGNDFSTLYAPLIRDGRM+
Sbjct: 241 QYTVNNQMVNATLMNIADNPTNVQLPGLYNKEENPRVPIIVTGNDFSTLYAPLIRDGRMD 300

Query: 301 KFYWAPTHDDCIGICTGIFRTDSVPIEDIVKLVDTFPGQSIDFFGALRARVYDDEVRKWA 360
           KFYWAPT +D IGICTGIFRTD VP EDIVKLVDTFPGQSIDFFGALRARVYD+EVRKWA
Sbjct: 301 KFYWAPTREDRIGICTGIFRTDGVPTEDIVKLVDTFPGQSIDFFGALRARVYDNEVRKWA 360

Query: 361 AGVGVERIGKSLVNSKEGPPTFDQPKMTLEKLLEYGNMLIKEQENVKRVKLAEKYLKEAA 420
           AGVGVE IGK+LVNSKEGPPTF+QPKMTLEKLLEYGNMLI EQENVKRVKLA+KYLKEAA
Sbjct: 361 AGVGVESIGKNLVNSKEGPPTFNQPKMTLEKLLEYGNMLIMEQENVKRVKLADKYLKEAA 420

Query: 421 LGDANEDVLEFQ-----------------------------------------------T 464
           LGDANEDV++F+                                               T
Sbjct: 421 LGDANEDVVQFETXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLKXXNEDVAQSGT 480

[Close]

BLAST of Carg26586 vs. TAIR10
Match: AT2G39730.1 (rubisco activase)

HSP 1 Score: 674.9 bits (1740), Expect = 3.6e-194
Identity = 333/432 (77.08%), Postives = 372/432 (86.11%), Query Frame = 0


Query: 1   MATTVPTIGAFNRT--SLNNSNYGGL-VPNSTFFGSRLKNFSSRFTTTSNMVTGNFKIVA 60
           MA  V T+GA NR   SLN S  G +  P STF G ++    SRF  ++    G+FK++A
Sbjct: 1   MAAAVSTVGAINRAPLSLNGSGSGAVSAPASTFLGKKVVTV-SRFAQSNKKSNGSFKVLA 60

Query: 61  EYDEEKQTEKDKWQGLAFDTSDDQQDIARGKGLADPLFQAPMGTGTHNAIMSSYEYISAG 120
              E+KQT+ D+W+GLA+DTSDDQQDI RGKG+ D +FQAPMGTGTH+A++SSYEY+S G
Sbjct: 61  -VKEDKQTDGDRWRGLAYDTSDDQQDITRGKGMVDSVFQAPMGTGTHHAVLSSYEYVSQG 120

Query: 121 LRQYNLDNNVDGFYIAPAFMDKLVVHIVKNFMSLPNIKVPLILGIWGGKGQGKSFQCELV 180
           LRQYNLDN +DGFYIAPAFMDKLVVHI KNF++LPNIKVPLILGIWGGKGQGKSFQCELV
Sbjct: 121 LRQYNLDNMMDGFYIAPAFMDKLVVHITKNFLTLPNIKVPLILGIWGGKGQGKSFQCELV 180

Query: 181 FAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAADIIKKGKMCCLLINDLDAGAGRFG 240
            AKMGINPIMMSAGELESGNAGEPAKLIRQRYREAAD+IKKGKMCCL INDLDAGAGR G
Sbjct: 181 MAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAADLIKKGKMCCLFINDLDAGAGRMG 240

Query: 241 GTTQYTVNNQMVNATLMNIADNPTNVQLPGLYNKEENPRVPIIVTGNDFSTLYAPLIRDG 300
           GTTQYTVNNQMVNATLMNIADNPTNVQLPG+YNKEEN RVPII TGNDFSTLYAPLIRDG
Sbjct: 241 GTTQYTVNNQMVNATLMNIADNPTNVQLPGMYNKEENARVPIICTGNDFSTLYAPLIRDG 300

Query: 301 RMEKFYWAPTHDDCIGICTGIFRTDSVPIEDIVKLVDTFPGQSIDFFGALRARVYDDEVR 360
           RMEKFYWAPT +D IG+C GIFRTD +  EDIV LVD FPGQSIDFFGALRARVYDDEVR
Sbjct: 301 RMEKFYWAPTREDRIGVCKGIFRTDKIKDEDIVTLVDQFPGQSIDFFGALRARVYDDEVR 360

Query: 361 KWAAGVGVERIGKSLVNSKEGPPTFDQPKMTLEKLLEYGNMLIKEQENVKRVKLAEKYLK 420
           K+   +GVE+IGK LVNS+EGPP F+QP+MT EKL+EYGNML+ EQENVKRV+LAE YL 
Sbjct: 361 KFVESLGVEKIGKRLVNSREGPPVFEQPEMTYEKLMEYGNMLVMEQENVKRVQLAETYLS 420

Query: 421 EAALGDANEDVL 430
           +AALGDAN D +
Sbjct: 421 QAALGDANADAI 430

[Close]

BLAST of Carg26586 vs. TAIR10
Match: AT1G73110.1 (P-loop containing nucleoside triphosphate hydrolases superfamily protein)

HSP 1 Score: 326.6 bits (836), Expect = 2.4e-89
Identity = 164/295 (55.59%), Postives = 219/295 (74.24%), Query Frame = 0


Query: 130 FYIAPAFMDKLVVHIVKNFMSLP-NIKVPLILGIWGGKGQGKSFQCELVFAKMGINPIMM 189
           +YIAP+F+DK+ VHIVKN+++   NIK+PLILGIWGGKGQGK+FQ EL+F  MG+ P++M
Sbjct: 136 YYIAPSFLDKVAVHIVKNYLAPSLNIKIPLILGIWGGKGQGKTFQTELIFKTMGVEPVIM 195

Query: 190 SAGELESGNAGEPAKLIRQRYREAADIIK-KGKMCCLLINDLDAGAGRFGGTTQYTVNNQ 249
           SAGELES  AGEP +LIR RYR A+ +I+ +GKM  L+IND+DAG GRF G TQ TVNNQ
Sbjct: 196 SAGELESDRAGEPGRLIRDRYRTASQVIQNQGKMSVLMINDIDAGLGRF-GETQMTVNNQ 255

Query: 250 MVNATLMNIADNPTNVQLPGLYNKEEN-PRVPIIVTGNDFSTLYAPLIRDGRMEKFYWAP 309
           +V  TLMN+ADNPT V +   + + +   RVP+IVTGNDFSTLYAPLIR+GRMEKFYW P
Sbjct: 256 IVVGTLMNLADNPTRVSVGQEWREADMVNRVPLIVTGNDFSTLYAPLIREGRMEKFYWQP 315

Query: 310 THDDCIGICTGIFRTDSVPIEDIVKLVDTFPGQSIDFFGALRARVYDDEVRKWA--AGVG 369
           T +D + I + ++  D +  +D++ +VD FP Q++DF+GALR+R YD  + KW   AG G
Sbjct: 316 TREDIVNIVSRMYEKDGISRKDVISIVDKFPNQALDFYGALRSRTYDRSILKWVDEAG-G 375

Query: 370 VERIGKSLVNSK--EGPPTFDQPKMTLEKLLEYGNMLIKEQENVKRVKLAEKYLK 418
           +E +GK L+  K  +  P F  P+ T+E LLE G  LI EQ+ +   KL+++Y+K
Sbjct: 376 METLGKVLLRRKKTQEVPQFTAPEQTVEALLESGYSLINEQKLIMETKLSKEYMK 428

[Close]

BLAST of Carg26586 vs. Swiss-Prot
Match: sp|Q01587|RCA_CUCSA (Ribulose bisphosphate carboxylase/oxygenase activase, chloroplastic OS=Cucumis sativus OX=3659 PE=2 SV=1)

HSP 1 Score: 758.1 bits (1956), Expect = 5.9e-218
Identity = 373/411 (90.75%), Postives = 388/411 (94.40%), Query Frame = 0


Query: 1   MATTVPTIGAFNRTSLNNSNYGGLVPNSTFFGSRLKNFSSRFTTTSNMVTGNFKIVAEYD 60
           MA TV TIGA NRT+LNNSNYGGLVPNS F GSRLK  SSRF TTS MVTGNFKIVAE D
Sbjct: 1   MAATVSTIGAVNRTTLNNSNYGGLVPNSAFLGSRLK-VSSRF-TTSKMVTGNFKIVAEQD 60

Query: 61  EEKQTEKDKWQGLAFDTSDDQQDIARGKGLADPLFQAPMGTGTHNAIMSSYEYISAGLRQ 120
           EEKQTEKDKW+GLAFDTSDDQQDI RGKGLADPLFQAPMGTGTHNA++SSYEYISAGLR 
Sbjct: 61  EEKQTEKDKWRGLAFDTSDDQQDITRGKGLADPLFQAPMGTGTHNAVLSSYEYISAGLRD 120

Query: 121 YNLDNNVDGFYIAPAFMDKLVVHIVKNFMSLPNIKVPLILGIWGGKGQGKSFQCELVFAK 180
           Y+ DNNVDGFYIAPAFMDKL VHIVKNF++LPNIKVPLILG+WGGKGQGKSFQCELVFAK
Sbjct: 121 YSYDNNVDGFYIAPAFMDKLTVHIVKNFLTLPNIKVPLILGVWGGKGQGKSFQCELVFAK 180

Query: 181 MGINPIMMSAGELESGNAGEPAKLIRQRYREAADIIKKGKMCCLLINDLDAGAGRFGGTT 240
           MGINPIMMSAGELESGNAGEPAKLIRQRYREAADIIKKGKMCCL INDLDAGAGR GGTT
Sbjct: 181 MGINPIMMSAGELESGNAGEPAKLIRQRYREAADIIKKGKMCCLFINDLDAGAGRLGGTT 240

Query: 241 QYTVNNQMVNATLMNIADNPTNVQLPGLYNKEENPRVPIIVTGNDFSTLYAPLIRDGRME 300
           QYTVNNQMVNATLMNIADNPTNVQLPG+YNKEENPRVPIIVTGNDFSTLYAPLIRDGRM+
Sbjct: 241 QYTVNNQMVNATLMNIADNPTNVQLPGMYNKEENPRVPIIVTGNDFSTLYAPLIRDGRMD 300

Query: 301 KFYWAPTHDDCIGICTGIFRTDSVPIEDIVKLVDTFPGQSIDFFGALRARVYDDEVRKWA 360
           KFYWAPT +D IGICTGIFRTD VP EDIVKLVDTFPGQSIDFFGALRARVYDDEVRKWA
Sbjct: 301 KFYWAPTREDRIGICTGIFRTDGVPFEDIVKLVDTFPGQSIDFFGALRARVYDDEVRKWA 360

Query: 361 AGVGVERIGKSLVNSKEGPPTFDQPKMTLEKLLEYGNMLIKEQENVKRVKL 412
            GVGVERIG++LVNSKE PPTFDQPKMT+EKLLEYGNML+ EQENVKRVKL
Sbjct: 361 VGVGVERIGRNLVNSKESPPTFDQPKMTIEKLLEYGNMLVMEQENVKRVKL 409

[Close]

BLAST of Carg26586 vs. Swiss-Prot
Match: sp|Q40281|RCA_MALDO (Ribulose bisphosphate carboxylase/oxygenase activase, chloroplastic OS=Malus domestica OX=3750 GN=RCA PE=2 SV=1)

HSP 1 Score: 711.8 bits (1836), Expect = 4.8e-204
Identity = 352/435 (80.92%), Postives = 385/435 (88.51%), Query Frame = 0


Query: 1   MATTVPTIGAFNRT--SLNNSNYGGLVPNSTFFGSRLKNFSSRFTTTSNMVTGNFKIVAE 60
           MAT V TIG+ NR   +LN S+    VP+STF GS LK  +SRF T S + +G+ +IVA 
Sbjct: 1   MATAVSTIGSVNRAPPNLNGSSSSASVPSSTFLGSSLKKVNSRF-TNSKVSSGSLRIVAS 60

Query: 61  YDEEKQTEKDKWQGLAFDTSDDQQDIARGKGLADPLFQAPMGTGTHNAIMSSYEYISAGL 120
            DE+KQT+KD+W+GLAFDTSDDQQDI RGKG  D LFQAP G+GTH AIMSSYEYIS GL
Sbjct: 61  VDEDKQTDKDRWKGLAFDTSDDQQDITRGKGKVDSLFQAPQGSGTHFAIMSSYEYISTGL 120

Query: 121 RQYNLDNNVDGFYIAPAFMDKLVVHIVKNFMSLPNIKVPLILGIWGGKGQGKSFQCELVF 180
           RQYN DNN+DG+YIAPAFMDKLVVHI KNFM+LPN+KVPLILGIWGGKGQGKSFQCELVF
Sbjct: 121 RQYNFDNNMDGYYIAPAFMDKLVVHITKNFMTLPNMKVPLILGIWGGKGQGKSFQCELVF 180

Query: 181 AKMGINPIMMSAGELESGNAGEPAKLIRQRYREAADIIKKGKMCCLLINDLDAGAGRFGG 240
           AKM I+PIMMSAGELESGNAGEPAKLIRQRYREAADII+KGKMC L INDLDAGAGR GG
Sbjct: 181 AKMRISPIMMSAGELESGNAGEPAKLIRQRYREAADIIRKGKMCALFINDLDAGAGRLGG 240

Query: 241 TTQYTVNNQMVNATLMNIADNPTNVQLPGLYNKEENPRVPIIVTGNDFSTLYAPLIRDGR 300
           TTQYTVNNQMVNATLMNIADNPTNVQLPG+YNKEENPRVPIIVTGNDFSTLYAPLIRDGR
Sbjct: 241 TTQYTVNNQMVNATLMNIADNPTNVQLPGMYNKEENPRVPIIVTGNDFSTLYAPLIRDGR 300

Query: 301 MEKFYWAPTHDDCIGICTGIFRTDSVPIEDIVKLVDTFPGQSIDFFGALRARVYDDEVRK 360
           MEKFYWAPT +D IG+C GIFR+D+V  EDIVKLVDTFPGQSIDFFGALRARVYDDEVRK
Sbjct: 301 MEKFYWAPTREDRIGVCIGIFRSDNVAKEDIVKLVDTFPGQSIDFFGALRARVYDDEVRK 360

Query: 361 WAAGVGVERIGKSLVNSKEGPPTFDQPKMTLEKLLEYGNMLIKEQENVKRVKLAEKYLKE 420
           W  GVGV+ IGK LVNSKEGPPTF+QPKMT+EKLLEYGNML++EQENVKRV+LA+KYL E
Sbjct: 361 WITGVGVDSIGKKLVNSKEGPPTFEQPKMTIEKLLEYGNMLVQEQENVKRVQLADKYLSE 420

Query: 421 AALGDANEDVLEFQT 434
           AALGDAN D +   T
Sbjct: 421 AALGDANSDAMNTGT 434

[Close]

BLAST of Carg26586 vs. Swiss-Prot
Match: sp|Q7X999|RCA2_LARTR (Ribulose bisphosphate carboxylase/oxygenase activase 2, chloroplastic OS=Larrea tridentata OX=66636 GN=RCA2 PE=2 SV=1)

HSP 1 Score: 705.7 bits (1820), Expect = 3.5e-202
Identity = 346/434 (79.72%), Postives = 386/434 (88.94%), Query Frame = 0


Query: 1   MATTVPTIGAFNRTSLNNSNYG---GLVPNSTFFGSRLKNFSSRFTTTSNMVTGNFKIVA 60
           MA    T+GA NR  L+ +  G    LVP++ FFGS LK  +++F   S   +GNFKIVA
Sbjct: 1   MAAAYSTVGAVNRAPLSLNGSGARASLVPSTAFFGSSLKKSAAKFPKAS---SGNFKIVA 60

Query: 61  -EYDEEKQTEKDKWQGLAFDTSDDQQDIARGKGLADPLFQAPMGTGTHNAIMSSYEYISA 120
            E  E++QT+KDKW+GLA+D SDDQQDI RGKG+ D LFQAPM +GTH A+MSSY+YIS 
Sbjct: 61  QEISEDQQTDKDKWKGLAYDISDDQQDITRGKGMVDTLFQAPMQSGTHYAVMSSYDYISQ 120

Query: 121 GLRQYNLDNNVDGFYIAPAFMDKLVVHIVKNFMSLPNIKVPLILGIWGGKGQGKSFQCEL 180
           GLRQYNLDNN+DGFYIAPAFMDKLVVHI KNF+SLPNIK+PLILGIWGGKGQGKSFQCEL
Sbjct: 121 GLRQYNLDNNMDGFYIAPAFMDKLVVHITKNFLSLPNIKIPLILGIWGGKGQGKSFQCEL 180

Query: 181 VFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAADIIKKGKMCCLLINDLDAGAGRF 240
           VFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAADIIKKGKMCCL INDLDAGAGR 
Sbjct: 181 VFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAADIIKKGKMCCLFINDLDAGAGRM 240

Query: 241 GGTTQYTVNNQMVNATLMNIADNPTNVQLPGLYNKEENPRVPIIVTGNDFSTLYAPLIRD 300
           GGTTQYTVNNQMVNATLMNIADNPTNVQLPG+YNKEENPRVPIIVTGNDFSTLYAPLIRD
Sbjct: 241 GGTTQYTVNNQMVNATLMNIADNPTNVQLPGMYNKEENPRVPIIVTGNDFSTLYAPLIRD 300

Query: 301 GRMEKFYWAPTHDDCIGICTGIFRTDSVPIEDIVKLVDTFPGQSIDFFGALRARVYDDEV 360
           GRMEKFYWAPT +D IG+C GIFRTD+VP EDIVK+VD FPGQSIDFFGALRARVYDDEV
Sbjct: 301 GRMEKFYWAPTREDRIGVCKGIFRTDNVPEEDIVKVVDQFPGQSIDFFGALRARVYDDEV 360

Query: 361 RKWAAGVGVERIGKSLVNSKEGPPTFDQPKMTLEKLLEYGNMLIKEQENVKRVKLAEKYL 420
           RKW + VGV+ IGK LVNSKEGPPTF+QPKMT++KLL+YGNML++EQENVKRV+LA+KY+
Sbjct: 361 RKWVSEVGVDTIGKKLVNSKEGPPTFEQPKMTIDKLLQYGNMLVEEQENVKRVQLADKYM 420

Query: 421 KEAALGDANEDVLE 431
            EAALGDAN+D ++
Sbjct: 421 SEAALGDANQDAIK 431

[Close]

BLAST of Carg26586 vs. Swiss-Prot
Match: sp|Q7X9A0|RCA1_LARTR (Ribulose bisphosphate carboxylase/oxygenase activase 1, chloroplastic OS=Larrea tridentata OX=66636 GN=RCA1 PE=1 SV=1)

HSP 1 Score: 696.8 bits (1797), Expect = 1.6e-199
Identity = 345/446 (77.35%), Postives = 385/446 (86.32%), Query Frame = 0


Query: 1   MATTVPTIGAFNRTSLNNSNYG---GLVPNSTFFGSRLKNFSSRFTTTSNMVTGNFKIVA 60
           MA    T+GA NR  L+ +  G    LVP++ FFGS LK  +++F   S   +GNFKIVA
Sbjct: 1   MAAAYSTVGAVNRAPLSLNGSGARASLVPSTAFFGSSLKKSAAKFPKAS---SGNFKIVA 60

Query: 61  -EYDEEKQTEKDKWQGLAFDTSDDQQDIARGKGLADPLFQAPMGTGTHNAIMSSYEYISA 120
            E  E++QT+KDKW+GLA+D SDDQQDI RGKG+ D LFQAPM +GTH A+MSSY+YIS 
Sbjct: 61  QEISEDQQTDKDKWKGLAYDISDDQQDITRGKGMVDTLFQAPMQSGTHYAVMSSYDYISQ 120

Query: 121 GLRQYNLDNNVDGFYIAPAFMDKLVVHIVKNFMSLPNIKVPLILGIWGGKGQGKSFQCEL 180
           GLRQYNLDNN+DGFYIAPAFMDKLVVHI KNF+SLPNIK+PLILGIWGGKGQGKSFQCEL
Sbjct: 121 GLRQYNLDNNMDGFYIAPAFMDKLVVHITKNFLSLPNIKIPLILGIWGGKGQGKSFQCEL 180

Query: 181 VFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAADIIKKGKMCCLLINDLDAGAGRF 240
           VFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAADIIKKGKMCCL INDLDAGAGR 
Sbjct: 181 VFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAADIIKKGKMCCLFINDLDAGAGRM 240

Query: 241 GGTTQYTVNNQMVNATLMNIADNPTNVQLPGLYNKEENPRVPIIVTGNDFSTLYAPLIRD 300
           GGTTQYTVNNQMVNATLMNIADNPTNVQLPG+YNKEENPRVPIIVTGNDFSTLYAPLIRD
Sbjct: 241 GGTTQYTVNNQMVNATLMNIADNPTNVQLPGMYNKEENPRVPIIVTGNDFSTLYAPLIRD 300

Query: 301 GRMEKFYWAPTHDDCIGICTGIFRTDSVPIEDIVKLVDTFPGQSIDFFGALRARVYDDEV 360
           GRMEKFYWAPT +D IG+C GIFRTD+V  +DIVKLVDTFPGQSIDFFGALRARVY DEV
Sbjct: 301 GRMEKFYWAPTREDRIGVCKGIFRTDNVADDDIVKLVDTFPGQSIDFFGALRARVYHDEV 360

Query: 361 RKWAAGVGVERIGKSLVNSKEGPPTFDQPKMTLEKLLEYGNMLIKEQENVKRVKLAEKYL 420
           RKW + VGV+ IGK LVNSKEGPP+F+QPKMT++KLL YG ML++EQENVKRV+LA+KY+
Sbjct: 361 RKWVSEVGVDTIGKKLVNSKEGPPSFEQPKMTIDKLLGYGGMLVQEQENVKRVQLADKYM 420

Query: 421 KEAALGDANEDVLEFQTSLDSMGKEQ 443
            EAALGDAN D ++  T       +Q
Sbjct: 421 SEAALGDANNDAIKRGTFYGGQAAQQ 443

[Close]

BLAST of Carg26586 vs. Swiss-Prot
Match: sp|Q40460|RCA1_TOBAC (Ribulose bisphosphate carboxylase/oxygenase activase 1, chloroplastic OS=Nicotiana tabacum OX=4097 PE=1 SV=1)

HSP 1 Score: 689.5 bits (1778), Expect = 2.6e-197
Identity = 335/434 (77.19%), Postives = 377/434 (86.87%), Query Frame = 0


Query: 1   MATTVPTIGAFNRT--SLNNSNYGGLVPNSTFFGSRLKNFSSRFTTTSNMVTGNFKIVAE 60
           MAT+V TIGA N+T  SLNNS  G  VP++ FFG  LK    +  ++  +   + +IVAE
Sbjct: 1   MATSVSTIGAVNKTPLSLNNSVAGTSVPSTAFFGKTLKKVYGKGVSSPKVTNKSLRIVAE 60

Query: 61  ---YDEEKQTEKDKWQGLAFDTSDDQQDIARGKGLADPLFQAPMGTGTHNAIMSSYEYIS 120
               D +KQT+ D+W+GL  D SDDQQDI RGKG+ D LFQAP GTGTH+A++ SYEY+S
Sbjct: 61  QIDVDPKKQTDSDRWKGLVQDFSDDQQDITRGKGMVDSLFQAPTGTGTHHAVLQSYEYVS 120

Query: 121 AGLRQYNLDNNVDGFYIAPAFMDKLVVHIVKNFMSLPNIKVPLILGIWGGKGQGKSFQCE 180
            GLRQYNLDN +DGFYIAPAFMDKLVVHI KNF+ LPNIKVPLILGIWGGKGQGKSFQCE
Sbjct: 121 QGLRQYNLDNKLDGFYIAPAFMDKLVVHITKNFLKLPNIKVPLILGIWGGKGQGKSFQCE 180

Query: 181 LVFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAADIIKKGKMCCLLINDLDAGAGR 240
           LVF KMGINPIMMSAGELESGNAGEPAKLIRQRYREAA+II+KG MCCL INDLDAGAGR
Sbjct: 181 LVFRKMGINPIMMSAGELESGNAGEPAKLIRQRYREAAEIIRKGNMCCLFINDLDAGAGR 240

Query: 241 FGGTTQYTVNNQMVNATLMNIADNPTNVQLPGLYNKEENPRVPIIVTGNDFSTLYAPLIR 300
            GGTTQYTVNNQMVNATLMNIADNPTNVQLPG+YNK+EN RVPIIVTGNDFSTLYAPLIR
Sbjct: 241 MGGTTQYTVNNQMVNATLMNIADNPTNVQLPGMYNKQENARVPIIVTGNDFSTLYAPLIR 300

Query: 301 DGRMEKFYWAPTHDDCIGICTGIFRTDSVPIEDIVKLVDTFPGQSIDFFGALRARVYDDE 360
           DGRMEKFYWAPT +D IG+CTGIFRTD+VP ED+VK+VD FPGQSIDFFGALRARVYDDE
Sbjct: 301 DGRMEKFYWAPTREDRIGVCTGIFRTDNVPAEDVVKIVDNFPGQSIDFFGALRARVYDDE 360

Query: 361 VRKWAAGVGVERIGKSLVNSKEGPPTFDQPKMTLEKLLEYGNMLIKEQENVKRVKLAEKY 420
           VRKW +G G+E+IG  L+NS +GPPTF+QPKMT+EKLLEYGNML++EQENVKRV+LA+KY
Sbjct: 361 VRKWVSGTGIEKIGDKLLNSFDGPPTFEQPKMTIEKLLEYGNMLVQEQENVKRVQLADKY 420

Query: 421 LKEAALGDANEDVL 430
           LKEAALGDAN D +
Sbjct: 421 LKEAALGDANADAI 434

[Close]

BLAST of Carg26586 vs. TrEMBL
Match: tr|A0A0A0KH85|A0A0A0KH85_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G188680 PE=4 SV=1)

HSP 1 Score: 791.6 bits (2043), Expect = 9.7e-226
Identity = 390/434 (89.86%), Postives = 409/434 (94.24%), Query Frame = 0


Query: 1   MATTVPTIGAFNRTSLNNSNYGGLVPNSTFFGSRLKNFSSRFTTTSNMVTGNFKIVAEYD 60
           MA TV TIGA NRT+LNNSNYGGLVPNS F GSRLK  SSRF TTS MVTGNFKIVAE D
Sbjct: 1   MAATVSTIGAVNRTTLNNSNYGGLVPNSAFLGSRLK-VSSRF-TTSKMVTGNFKIVAEQD 60

Query: 61  EEKQTEKDKWQGLAFDTSDDQQDIARGKGLADPLFQAPMGTGTHNAIMSSYEYISAGLRQ 120
           EEKQTEKDKW+GLAFDTSDDQQDI RGKGLADPLFQAPMGTGTHNA++SSYEYISAGLR 
Sbjct: 61  EEKQTEKDKWRGLAFDTSDDQQDITRGKGLADPLFQAPMGTGTHNAVLSSYEYISAGLRD 120

Query: 121 YNLDNNVDGFYIAPAFMDKLVVHIVKNFMSLPNIKVPLILGIWGGKGQGKSFQCELVFAK 180
           Y+ DNNVDGFYIAPAFMDKL VHIVKNF++LPNIKVPLILG+WGGKGQGKSFQCELVFAK
Sbjct: 121 YSYDNNVDGFYIAPAFMDKLTVHIVKNFLTLPNIKVPLILGVWGGKGQGKSFQCELVFAK 180

Query: 181 MGINPIMMSAGELESGNAGEPAKLIRQRYREAADIIKKGKMCCLLINDLDAGAGRFGGTT 240
           MGINPIMMSAGELESGNAGEPAKLIRQRYREAADIIKKGKMCCL INDLDAGAGR GGTT
Sbjct: 181 MGINPIMMSAGELESGNAGEPAKLIRQRYREAADIIKKGKMCCLFINDLDAGAGRLGGTT 240

Query: 241 QYTVNNQMVNATLMNIADNPTNVQLPGLYNKEENPRVPIIVTGNDFSTLYAPLIRDGRME 300
           QYTVNNQMVNATLMNIADNPTNVQLPG+YNKEENPRVPIIVTGNDFSTLYAPLIRDGRM+
Sbjct: 241 QYTVNNQMVNATLMNIADNPTNVQLPGMYNKEENPRVPIIVTGNDFSTLYAPLIRDGRMD 300

Query: 301 KFYWAPTHDDCIGICTGIFRTDSVPIEDIVKLVDTFPGQSIDFFGALRARVYDDEVRKWA 360
           KFYWAPT +D IGICTGIFRTD VP EDIVKLVDTFPGQSIDFFGALRARVYDDEVRKWA
Sbjct: 301 KFYWAPTREDRIGICTGIFRTDGVPFEDIVKLVDTFPGQSIDFFGALRARVYDDEVRKWA 360

Query: 361 AGVGVERIGKSLVNSKEGPPTFDQPKMTLEKLLEYGNMLIKEQENVKRVKLAEKYLKEAA 420
            GVGVERIG++LVNSKE PPTFDQPKMT+EKLLEYGNML+ EQENVKRVKLA+KYL EAA
Sbjct: 361 VGVGVERIGRNLVNSKESPPTFDQPKMTIEKLLEYGNMLVMEQENVKRVKLADKYLNEAA 420

Query: 421 LGDANEDVLEFQTS 435
           LGDANED ++F+TS
Sbjct: 421 LGDANEDDVQFKTS 432

[Close]

BLAST of Carg26586 vs. TrEMBL
Match: tr|C5J0I3|C5J0I3_CUCSA (Chloroplast rubisco activase OS=Cucumis sativus OX=3659 GN=rca PE=2 SV=1)

HSP 1 Score: 787.7 bits (2033), Expect = 1.4e-224
Identity = 388/431 (90.02%), Postives = 406/431 (94.20%), Query Frame = 0


Query: 1   MATTVPTIGAFNRTSLNNSNYGGLVPNSTFFGSRLKNFSSRFTTTSNMVTGNFKIVAEYD 60
           MA TV TIGA NRT+LNNSNYGGLVPNS F GSRLK  SSRF TTS MVTGNFKIVAE D
Sbjct: 1   MAATVSTIGAVNRTTLNNSNYGGLVPNSAFLGSRLK-VSSRF-TTSKMVTGNFKIVAEQD 60

Query: 61  EEKQTEKDKWQGLAFDTSDDQQDIARGKGLADPLFQAPMGTGTHNAIMSSYEYISAGLRQ 120
           EEKQTEKDKW+GLAFDTSDDQQDI RGKGLADPLFQAPMGTGTHNA++SSYEYISAGLR 
Sbjct: 61  EEKQTEKDKWRGLAFDTSDDQQDITRGKGLADPLFQAPMGTGTHNAVLSSYEYISAGLRD 120

Query: 121 YNLDNNVDGFYIAPAFMDKLVVHIVKNFMSLPNIKVPLILGIWGGKGQGKSFQCELVFAK 180
           Y+ DNNVDGFYIAPAFMDKL VHIVKNF++LPNIKVPLILG+WGGKGQGKSFQCELVFAK
Sbjct: 121 YSYDNNVDGFYIAPAFMDKLTVHIVKNFLTLPNIKVPLILGVWGGKGQGKSFQCELVFAK 180

Query: 181 MGINPIMMSAGELESGNAGEPAKLIRQRYREAADIIKKGKMCCLLINDLDAGAGRFGGTT 240
           MGINPIMMSAGELESGNAGEPAKLIRQRYREAADIIKKGKMCCL INDLDAGAGR GGTT
Sbjct: 181 MGINPIMMSAGELESGNAGEPAKLIRQRYREAADIIKKGKMCCLFINDLDAGAGRLGGTT 240

Query: 241 QYTVNNQMVNATLMNIADNPTNVQLPGLYNKEENPRVPIIVTGNDFSTLYAPLIRDGRME 300
           QYTVNNQMVNATLMNIADNPTNVQLPG+YNKEENPRVPIIVTGNDFSTLYAPLIRDGRM+
Sbjct: 241 QYTVNNQMVNATLMNIADNPTNVQLPGMYNKEENPRVPIIVTGNDFSTLYAPLIRDGRMD 300

Query: 301 KFYWAPTHDDCIGICTGIFRTDSVPIEDIVKLVDTFPGQSIDFFGALRARVYDDEVRKWA 360
           KFYWAPT +D IGICTGIFRTD VP EDIVKLVDTFPGQSIDFFGALRARVYDDEVRKWA
Sbjct: 301 KFYWAPTREDRIGICTGIFRTDGVPFEDIVKLVDTFPGQSIDFFGALRARVYDDEVRKWA 360

Query: 361 AGVGVERIGKSLVNSKEGPPTFDQPKMTLEKLLEYGNMLIKEQENVKRVKLAEKYLKEAA 420
            GVGVERIG++LVNSKE PPTFDQPKMT+EKLLEYGNML+ EQENVKRVKLA+KYL EAA
Sbjct: 361 VGVGVERIGRNLVNSKESPPTFDQPKMTIEKLLEYGNMLVMEQENVKRVKLADKYLNEAA 420

Query: 421 LGDANEDVLEF 432
           LGDANED ++F
Sbjct: 421 LGDANEDDVQF 429

[Close]

BLAST of Carg26586 vs. TrEMBL
Match: tr|A0A1S4E4J7|A0A1S4E4J7_CUCME (ribulose bisphosphate carboxylase/oxygenase activase, chloroplastic isoform X3 OS=Cucumis melo OX=3656 GN=LOC103502060 PE=4 SV=1)

HSP 1 Score: 785.8 bits (2028), Expect = 5.3e-224
Identity = 388/434 (89.40%), Postives = 408/434 (94.01%), Query Frame = 0


Query: 1   MATTVPTIGAFNRTSLNNSNYGGLVPNSTFFGSRLKNFSSRFTTTSNMVTGNFKIVAEYD 60
           MA TV TIGA NRT+LNNSNYGGLVPNS F GSRLK   SRF TTS MVTGNFKIVAE +
Sbjct: 1   MAATVSTIGAVNRTTLNNSNYGGLVPNSAFLGSRLK-VISRF-TTSKMVTGNFKIVAEQE 60

Query: 61  EEKQTEKDKWQGLAFDTSDDQQDIARGKGLADPLFQAPMGTGTHNAIMSSYEYISAGLRQ 120
           EEKQTEKDKW+GLAFDTSDDQQDI RGKGLADPLFQAPMGTGTHNA++SSYEYISAGLRQ
Sbjct: 61  EEKQTEKDKWRGLAFDTSDDQQDITRGKGLADPLFQAPMGTGTHNAVLSSYEYISAGLRQ 120

Query: 121 YNLDNNVDGFYIAPAFMDKLVVHIVKNFMSLPNIKVPLILGIWGGKGQGKSFQCELVFAK 180
           Y+ DNNVDGFYIAPAFMDKL VHIVKNF++LPNIKVPLILGIWGGKGQGKSFQCELVFAK
Sbjct: 121 YDYDNNVDGFYIAPAFMDKLTVHIVKNFLNLPNIKVPLILGIWGGKGQGKSFQCELVFAK 180

Query: 181 MGINPIMMSAGELESGNAGEPAKLIRQRYREAADIIKKGKMCCLLINDLDAGAGRFGGTT 240
           MGINPIMMSAGELESGNAGEPAKLIRQRYREAADIIKKGKMCCL INDLDAGAGR GGTT
Sbjct: 181 MGINPIMMSAGELESGNAGEPAKLIRQRYREAADIIKKGKMCCLFINDLDAGAGRLGGTT 240

Query: 241 QYTVNNQMVNATLMNIADNPTNVQLPGLYNKEENPRVPIIVTGNDFSTLYAPLIRDGRME 300
           QYTVNNQMVNATLMNIADNPTNVQLPG+YNKEENPRVPIIVTGNDFSTLYAPLIRDGRM+
Sbjct: 241 QYTVNNQMVNATLMNIADNPTNVQLPGMYNKEENPRVPIIVTGNDFSTLYAPLIRDGRMD 300

Query: 301 KFYWAPTHDDCIGICTGIFRTDSVPIEDIVKLVDTFPGQSIDFFGALRARVYDDEVRKWA 360
           KFYWAPT +D IGIC+GIFRTD VP EDIV+LVDTFPGQSIDFFGALRARVYDDEVRKWA
Sbjct: 301 KFYWAPTREDRIGICSGIFRTDGVPFEDIVRLVDTFPGQSIDFFGALRARVYDDEVRKWA 360

Query: 361 AGVGVERIGKSLVNSKEGPPTFDQPKMTLEKLLEYGNMLIKEQENVKRVKLAEKYLKEAA 420
            GVGVE IG++LVNSKE PPTFDQPKMT+EKLLEYGNMLI EQENVKRVKLA+KYL EAA
Sbjct: 361 VGVGVEHIGRNLVNSKESPPTFDQPKMTIEKLLEYGNMLIMEQENVKRVKLADKYLSEAA 420

Query: 421 LGDANEDVLEFQTS 435
           LGDANED ++F+TS
Sbjct: 421 LGDANEDDVQFKTS 432

[Close]

BLAST of Carg26586 vs. TrEMBL
Match: tr|A0A1S3CKP0|A0A1S3CKP0_CUCME (ribulose bisphosphate carboxylase/oxygenase activase, chloroplastic isoform X8 OS=Cucumis melo OX=3656 GN=LOC103502060 PE=4 SV=1)

HSP 1 Score: 785.8 bits (2028), Expect = 5.3e-224
Identity = 388/434 (89.40%), Postives = 408/434 (94.01%), Query Frame = 0


Query: 1   MATTVPTIGAFNRTSLNNSNYGGLVPNSTFFGSRLKNFSSRFTTTSNMVTGNFKIVAEYD 60
           MA TV TIGA NRT+LNNSNYGGLVPNS F GSRLK   SRF TTS MVTGNFKIVAE +
Sbjct: 1   MAATVSTIGAVNRTTLNNSNYGGLVPNSAFLGSRLK-VISRF-TTSKMVTGNFKIVAEQE 60

Query: 61  EEKQTEKDKWQGLAFDTSDDQQDIARGKGLADPLFQAPMGTGTHNAIMSSYEYISAGLRQ 120
           EEKQTEKDKW+GLAFDTSDDQQDI RGKGLADPLFQAPMGTGTHNA++SSYEYISAGLRQ
Sbjct: 61  EEKQTEKDKWRGLAFDTSDDQQDITRGKGLADPLFQAPMGTGTHNAVLSSYEYISAGLRQ 120

Query: 121 YNLDNNVDGFYIAPAFMDKLVVHIVKNFMSLPNIKVPLILGIWGGKGQGKSFQCELVFAK 180
           Y+ DNNVDGFYIAPAFMDKL VHIVKNF++LPNIKVPLILGIWGGKGQGKSFQCELVFAK
Sbjct: 121 YDYDNNVDGFYIAPAFMDKLTVHIVKNFLNLPNIKVPLILGIWGGKGQGKSFQCELVFAK 180

Query: 181 MGINPIMMSAGELESGNAGEPAKLIRQRYREAADIIKKGKMCCLLINDLDAGAGRFGGTT 240
           MGINPIMMSAGELESGNAGEPAKLIRQRYREAADIIKKGKMCCL INDLDAGAGR GGTT
Sbjct: 181 MGINPIMMSAGELESGNAGEPAKLIRQRYREAADIIKKGKMCCLFINDLDAGAGRLGGTT 240

Query: 241 QYTVNNQMVNATLMNIADNPTNVQLPGLYNKEENPRVPIIVTGNDFSTLYAPLIRDGRME 300
           QYTVNNQMVNATLMNIADNPTNVQLPG+YNKEENPRVPIIVTGNDFSTLYAPLIRDGRM+
Sbjct: 241 QYTVNNQMVNATLMNIADNPTNVQLPGMYNKEENPRVPIIVTGNDFSTLYAPLIRDGRMD 300

Query: 301 KFYWAPTHDDCIGICTGIFRTDSVPIEDIVKLVDTFPGQSIDFFGALRARVYDDEVRKWA 360
           KFYWAPT +D IGIC+GIFRTD VP EDIV+LVDTFPGQSIDFFGALRARVYDDEVRKWA
Sbjct: 301 KFYWAPTREDRIGICSGIFRTDGVPFEDIVRLVDTFPGQSIDFFGALRARVYDDEVRKWA 360

Query: 361 AGVGVERIGKSLVNSKEGPPTFDQPKMTLEKLLEYGNMLIKEQENVKRVKLAEKYLKEAA 420
            GVGVE IG++LVNSKE PPTFDQPKMT+EKLLEYGNMLI EQENVKRVKLA+KYL EAA
Sbjct: 361 VGVGVEHIGRNLVNSKESPPTFDQPKMTIEKLLEYGNMLIMEQENVKRVKLADKYLSEAA 420

Query: 421 LGDANEDVLEFQTS 435
           LGDANED ++F+TS
Sbjct: 421 LGDANEDDVQFKTS 432

[Close]

BLAST of Carg26586 vs. TrEMBL
Match: tr|A0A1S4E5A1|A0A1S4E5A1_CUCME (ribulose bisphosphate carboxylase/oxygenase activase, chloroplastic isoform X7 OS=Cucumis melo OX=3656 GN=LOC103502060 PE=4 SV=1)

HSP 1 Score: 784.3 bits (2024), Expect = 1.5e-223
Identity = 387/433 (89.38%), Postives = 407/433 (94.00%), Query Frame = 0


Query: 1   MATTVPTIGAFNRTSLNNSNYGGLVPNSTFFGSRLKNFSSRFTTTSNMVTGNFKIVAEYD 60
           MA TV TIGA NRT+LNNSNYGGLVPNS F GSRLK   SRF TTS MVTGNFKIVAE +
Sbjct: 1   MAATVSTIGAVNRTTLNNSNYGGLVPNSAFLGSRLK-VISRF-TTSKMVTGNFKIVAEQE 60

Query: 61  EEKQTEKDKWQGLAFDTSDDQQDIARGKGLADPLFQAPMGTGTHNAIMSSYEYISAGLRQ 120
           EEKQTEKDKW+GLAFDTSDDQQDI RGKGLADPLFQAPMGTGTHNA++SSYEYISAGLRQ
Sbjct: 61  EEKQTEKDKWRGLAFDTSDDQQDITRGKGLADPLFQAPMGTGTHNAVLSSYEYISAGLRQ 120

Query: 121 YNLDNNVDGFYIAPAFMDKLVVHIVKNFMSLPNIKVPLILGIWGGKGQGKSFQCELVFAK 180
           Y+ DNNVDGFYIAPAFMDKL VHIVKNF++LPNIKVPLILGIWGGKGQGKSFQCELVFAK
Sbjct: 121 YDYDNNVDGFYIAPAFMDKLTVHIVKNFLNLPNIKVPLILGIWGGKGQGKSFQCELVFAK 180

Query: 181 MGINPIMMSAGELESGNAGEPAKLIRQRYREAADIIKKGKMCCLLINDLDAGAGRFGGTT 240
           MGINPIMMSAGELESGNAGEPAKLIRQRYREAADIIKKGKMCCL INDLDAGAGR GGTT
Sbjct: 181 MGINPIMMSAGELESGNAGEPAKLIRQRYREAADIIKKGKMCCLFINDLDAGAGRLGGTT 240

Query: 241 QYTVNNQMVNATLMNIADNPTNVQLPGLYNKEENPRVPIIVTGNDFSTLYAPLIRDGRME 300
           QYTVNNQMVNATLMNIADNPTNVQLPG+YNKEENPRVPIIVTGNDFSTLYAPLIRDGRM+
Sbjct: 241 QYTVNNQMVNATLMNIADNPTNVQLPGMYNKEENPRVPIIVTGNDFSTLYAPLIRDGRMD 300

Query: 301 KFYWAPTHDDCIGICTGIFRTDSVPIEDIVKLVDTFPGQSIDFFGALRARVYDDEVRKWA 360
           KFYWAPT +D IGIC+GIFRTD VP EDIV+LVDTFPGQSIDFFGALRARVYDDEVRKWA
Sbjct: 301 KFYWAPTREDRIGICSGIFRTDGVPFEDIVRLVDTFPGQSIDFFGALRARVYDDEVRKWA 360

Query: 361 AGVGVERIGKSLVNSKEGPPTFDQPKMTLEKLLEYGNMLIKEQENVKRVKLAEKYLKEAA 420
            GVGVE IG++LVNSKE PPTFDQPKMT+EKLLEYGNMLI EQENVKRVKLA+KYL EAA
Sbjct: 361 VGVGVEHIGRNLVNSKESPPTFDQPKMTIEKLLEYGNMLIMEQENVKRVKLADKYLSEAA 420

Query: 421 LGDANEDVLEFQT 434
           LGDANED ++F+T
Sbjct: 421 LGDANEDDVQFKT 431

The following BLAST results are available for this feature:

BLAST of Carg26586 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_023532228.1	2.4e-260	97.41	ribulose bisphosphate carboxylase/oxygenase activase, chloroplastic-like isoform...	[more]
XP_022947286.1	2.0e-259	97.62	ribulose bisphosphate carboxylase/oxygenase activase, chloroplastic-like [Cucurb...	[more]
XP_023007005.1	1.6e-256	95.90	ribulose bisphosphate carboxylase/oxygenase activase, chloroplastic-like [Cucurb...	[more]
XP_023512815.1	6.1e-232	80.98	ribulose bisphosphate carboxylase/oxygenase activase, chloroplastic isoform X9 [...	[more]
XP_022986816.1	1.4e-231	80.98	ribulose bisphosphate carboxylase/oxygenase activase, chloroplastic isoform X10 ...	[more]

BLAST of Carg26586 vs. TAIR10


Match Name	E-value	Identity	Description
AT2G39730.1	3.6e-194	77.08	rubisco activase	[more]
AT1G73110.1	2.4e-89	55.59	P-loop containing nucleoside triphosphate hydrolases superfamily protein	[more]

BLAST of Carg26586 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|Q01587\|RCA_CUCSA	5.9e-218	90.75	Ribulose bisphosphate carboxylase/oxygenase activase, chloroplastic OS=Cucumis s...	[more]
sp\|Q40281\|RCA_MALDO	4.8e-204	80.92	Ribulose bisphosphate carboxylase/oxygenase activase, chloroplastic OS=Malus dom...	[more]
sp\|Q7X999\|RCA2_LARTR	3.5e-202	79.72	Ribulose bisphosphate carboxylase/oxygenase activase 2, chloroplastic OS=Larrea ...	[more]
sp\|Q7X9A0\|RCA1_LARTR	1.6e-199	77.35	Ribulose bisphosphate carboxylase/oxygenase activase 1, chloroplastic OS=Larrea ...	[more]
sp\|Q40460\|RCA1_TOBAC	2.6e-197	77.19	Ribulose bisphosphate carboxylase/oxygenase activase 1, chloroplastic OS=Nicotia...	[more]

BLAST of Carg26586 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A0A0KH85\|A0A0A0KH85_CUCSA	9.7e-226	89.86	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G188680 PE=4 SV=1	[more]
tr\|C5J0I3\|C5J0I3_CUCSA	1.4e-224	90.02	Chloroplast rubisco activase OS=Cucumis sativus OX=3659 GN=rca PE=2 SV=1	[more]
tr\|A0A1S4E4J7\|A0A1S4E4J7_CUCME	5.3e-224	89.40	ribulose bisphosphate carboxylase/oxygenase activase, chloroplastic isoform X3 O...	[more]
tr\|A0A1S3CKP0\|A0A1S3CKP0_CUCME	5.3e-224	89.40	ribulose bisphosphate carboxylase/oxygenase activase, chloroplastic isoform X8 O...	[more]
tr\|A0A1S4E5A1\|A0A1S4E5A1_CUCME	1.5e-223	89.38	ribulose bisphosphate carboxylase/oxygenase activase, chloroplastic isoform X7 O...	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Molecular Function**
Term	Definition
GO:0005524	ATP binding

Vocabulary: **INTERPRO**
Term	Definition
IPR027417	P-loop_NTPase
IPR003959	ATPase_AAA_core

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0005524	ATP binding

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg26586-RA	Carg26586-RA	mRNA

InterPro

Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	GENE3D	G3DSA:1.10.8.1070		coord: 307..419 e-value: 1.9E-46 score: 158.8
None	No IPR available	GENE3D	G3DSA:3.40.50.300		coord: 122..306 e-value: 2.6E-42 score: 146.6
None	No IPR available	PANTHER	PTHR32429:SF12	SUBFAMILY NOT NAMED	coord: 1..437
None	No IPR available	PANTHER	PTHR32429	FAMILY NOT NAMED	coord: 1..437
IPR003959	ATPase, AAA-type, core	PFAM	PF00004	AAA	coord: 162..303 e-value: 4.9E-14 score: 52.8
IPR027417	P-loop containing nucleoside triphosphate hydrolase	SUPERFAMILY	SSF52540	P-loop containing nucleoside triphosphate hydrolases	coord: 134..330

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Carg26586	Cla013326	Watermelon (97103) v1	carwmB0916
Carg26586	Csa6G188680	Cucumber (Chinese Long) v2	carcuB0930
Carg26586	MELO3C025892	Melon (DHL92) v3.5.1	carmeB0901
Carg26586	ClCG02G019910	Watermelon (Charleston Gray)	carwcgB0894
Carg26586	CSPI06G14240	Wild cucumber (PI 183967)	carcpiB0953
Carg26586	Cucsa.138900	Cucumber (Gy14) v1	carcgyB1033
Carg26586	CmaCh02G007820	Cucurbita maxima (Rimu)	carcmaB1257
Carg26586	CmaCh20G003820	Cucurbita maxima (Rimu)	carcmaB1256
Carg26586	CmoCh02G007820	Cucurbita moschata (Rifu)	carcmoB1226
Carg26586	CmoCh20G004140	Cucurbita moschata (Rifu)	carcmoB1225
Carg26586	Lsi10G013990	Bottle gourd (USVL1VR-Ls)	carlsiB832
Carg26586	Cp4.1LG05g09380	Cucurbita pepo (Zucchini)	carcpeB1265
Carg26586	Cp4.1LG16g06300	Cucurbita pepo (Zucchini)	carcpeB1264
Carg26586	CsGy6G014090	Cucumber (Gy14) v2	carcgybB0903
Carg26586	MELO3C025892.2	Melon (DHL92) v3.6.1	carmedB0909
Carg26586	CsaV3_7G009990	Cucumber (Chinese Long) v3	carcucB0954
Carg26586	CsaV3_6G016610	Cucumber (Chinese Long) v3	carcucB0953
Carg26586	Cla97C02G045920	Watermelon (97103) v2	carwmbB0960
Carg26586	Bhi10G000592	Wax gourd	carwgoB1058

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
Carg26586	Carg03335	Silver-seed gourd	carcarB365

The following block(s) are covering this gene:

None