Carg26581 (gene) Silver-seed gourd | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Carg26581
Type	gene
Organism	Cucurbita argyrosperma (Silver-seed gourd)
Description	E3 ubiquitin-protein ligase RING1
Location	Cucurbita_argyrosperma_scaffold_420 : 7394 .. 8530 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCTTCCGGTACGGCGTCGTATTGGTGTTACCGGTGCAACCGATTCGTTCGTGCTTGGGTTCAAGACACCATATCTTGTCCTTACTGTGACGGTGGATTTGTTGAAGCAATCGAAACCGCGTCTTCTCTCCCGGCGGCGAATCTCCACCGTCGATTCTCGCCGTCTGCGATTCACACTTTGGATCAAGATCCGTTTCAGTCTCCTCGCTTGAGCACCCGGCGAAGTCGCCGTAGACTTGGGGATCGGTCGACTTTTAACCCTGTTGTTGTTCTTCGTGGTTCTGCCGACGGTGGCGATGAGGGCGGCGGTGGTGGGGAGAATAATAGCTTCGATATTTACTATGACGATGGTGCTGGGTCTGGTCTTCGGCCGGTTCCGGCGACGATGTCGGAGTTTCTGATGGGGACTGGATTTGATCGGTTGTTGGAGCAGTTGGCTCAACTGGAGATCAACGGGTTTGGCAGATCTGAAAATCCGCCGGCGTCGAAAGCAGCGGTGGAATCAATGCCGACGATTGAGATTTTGGAAAGTCACGTGGATTCAGATTCGCACTGTGCGGTTTGTAAAGAGGCGTTTGAAATAGGAACCGAAGCCCGAGAAATGCCCTGTAAGCACATATATCACTCCGATTGCATAATCCCTTGGCTTTCGATGAGAAATTCCTGTCCGGTCTGCCGACACGAACTGCCATCGGAACGCGTATCTCCAGCCGGCGGGGTTTCAGATCGCGTGGTCGACGAAGAGACCGTAGGGTTAACAATCTGGAGACTCCCTGGAGGTGGATTCGCCGTTGGCCGATTCACCGGCGGTAGACTGACCGGCGAGAGAGATCCACCAGCGGTCTACACCGAAATGGACGGTGGATTCAATGCCAACGGAGCTCCGAGAAGGGTCTCGTGGGCTTCGAGAAGAAGCAGGGGAAGGGAAAACCGAGGAATCGGACGAACATTCCGTAACATCTTTTCTTTTTTCGGAAGATTAAGGTCTTCGAATTCATCTTCTTCTTTGGCTTCGAATGAAACTGAATCTGTTAGTAGAAGCCATAGCCGTTCGAGCTCTTCAGTCTTCAGCAGATACTTGCGAAGGCCAAACAGAACTTGGCTGGAGAATCATACTGAAAATGGCCGATGGTGA

mRNA sequence

ATGGCTTCCGGTACGGCGTCGTATTGGTGTTACCGGTGCAACCGATTCGTTCGTGCTTGGGTTCAAGACACCATATCTTGTCCTTACTGTGACGGTGGATTTGTTGAAGCAATCGAAACCGCGTCTTCTCTCCCGGCGGCGAATCTCCACCGTCGATTCTCGCCGTCTGCGATTCACACTTTGGATCAAGATCCGTTTCAGTCTCCTCGCTTGAGCACCCGGCGAAGTCGCCGTAGACTTGGGGATCGGTCGACTTTTAACCCTGTTGTTGTTCTTCGTGGTTCTGCCGACGGTGGCGATGAGGGCGGCGGTGGTGGGGAGAATAATAGCTTCGATATTTACTATGACGATGGTGCTGGGTCTGGTCTTCGGCCGGTTCCGGCGACGATGTCGGAGTTTCTGATGGGGACTGGATTTGATCGGTTGTTGGAGCAGTTGGCTCAACTGGAGATCAACGGGTTTGGCAGATCTGAAAATCCGCCGGCGTCGAAAGCAGCGGTGGAATCAATGCCGACGATTGAGATTTTGGAAAGTCACGTGGATTCAGATTCGCACTGTGCGGTTTGTAAAGAGGCGTTTGAAATAGGAACCGAAGCCCGAGAAATGCCCTGTAAGCACATATATCACTCCGATTGCATAATCCCTTGGCTTTCGATGAGAAATTCCTGTCCGGTCTGCCGACACGAACTGCCATCGGAACGCGTATCTCCAGCCGGCGGGGTTTCAGATCGCGTGGTCGACGAAGAGACCGTAGGGTTAACAATCTGGAGACTCCCTGGAGGTGGATTCGCCGTTGGCCGATTCACCGGCGGTAGACTGACCGGCGAGAGAGATCCACCAGCGGTCTACACCGAAATGGACGGTGGATTCAATGCCAACGGAGCTCCGAGAAGGGTCTCGTGGGCTTCGAGAAGAAGCAGGGGAAGGGAAAACCGAGGAATCGGACGAACATTCCGTAACATCTTTTCTTTTTTCGGAAGATTAAGGTCTTCGAATTCATCTTCTTCTTTGGCTTCGAATGAAACTGAATCTGTTAGTAGAAGCCATAGCCGTTCGAGCTCTTCAGTCTTCAGCAGATACTTGCGAAGGCCAAACAGAACTTGGCTGGAGAATCATACTGAAAATGGCCGATGGTGA

Coding sequence (CDS)

ATGGCTTCCGGTACGGCGTCGTATTGGTGTTACCGGTGCAACCGATTCGTTCGTGCTTGGGTTCAAGACACCATATCTTGTCCTTACTGTGACGGTGGATTTGTTGAAGCAATCGAAACCGCGTCTTCTCTCCCGGCGGCGAATCTCCACCGTCGATTCTCGCCGTCTGCGATTCACACTTTGGATCAAGATCCGTTTCAGTCTCCTCGCTTGAGCACCCGGCGAAGTCGCCGTAGACTTGGGGATCGGTCGACTTTTAACCCTGTTGTTGTTCTTCGTGGTTCTGCCGACGGTGGCGATGAGGGCGGCGGTGGTGGGGAGAATAATAGCTTCGATATTTACTATGACGATGGTGCTGGGTCTGGTCTTCGGCCGGTTCCGGCGACGATGTCGGAGTTTCTGATGGGGACTGGATTTGATCGGTTGTTGGAGCAGTTGGCTCAACTGGAGATCAACGGGTTTGGCAGATCTGAAAATCCGCCGGCGTCGAAAGCAGCGGTGGAATCAATGCCGACGATTGAGATTTTGGAAAGTCACGTGGATTCAGATTCGCACTGTGCGGTTTGTAAAGAGGCGTTTGAAATAGGAACCGAAGCCCGAGAAATGCCCTGTAAGCACATATATCACTCCGATTGCATAATCCCTTGGCTTTCGATGAGAAATTCCTGTCCGGTCTGCCGACACGAACTGCCATCGGAACGCGTATCTCCAGCCGGCGGGGTTTCAGATCGCGTGGTCGACGAAGAGACCGTAGGGTTAACAATCTGGAGACTCCCTGGAGGTGGATTCGCCGTTGGCCGATTCACCGGCGGTAGACTGACCGGCGAGAGAGATCCACCAGCGGTCTACACCGAAATGGACGGTGGATTCAATGCCAACGGAGCTCCGAGAAGGGTCTCGTGGGCTTCGAGAAGAAGCAGGGGAAGGGAAAACCGAGGAATCGGACGAACATTCCGTAACATCTTTTCTTTTTTCGGAAGATTAAGGTCTTCGAATTCATCTTCTTCTTTGGCTTCGAATGAAACTGAATCTGTTAGTAGAAGCCATAGCCGTTCGAGCTCTTCAGTCTTCAGCAGATACTTGCGAAGGCCAAACAGAACTTGGCTGGAGAATCATACTGAAAATGGCCGATGGTGA

Protein sequence

MASGTASYWCYRCNRFVRAWVQDTISCPYCDGGFVEAIETASSLPAANLHRRFSPSAIHTLDQDPFQSPRLSTRRSRRRLGDRSTFNPVVVLRGSADGGDEGGGGGENNSFDIYYDDGAGSGLRPVPATMSEFLMGTGFDRLLEQLAQLEINGFGRSENPPASKAAVESMPTIEILESHVDSDSHCAVCKEAFEIGTEAREMPCKHIYHSDCIIPWLSMRNSCPVCRHELPSERVSPAGGVSDRVVDEETVGLTIWRLPGGGFAVGRFTGGRLTGERDPPAVYTEMDGGFNANGAPRRVSWASRRSRGRENRGIGRTFRNIFSFFGRLRSSNSSSSLASNETESVSRSHSRSSSSVFSRYLRRPNRTWLENHTENGRW

Homology

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BLAST of Carg26581 vs. NCBI nr
Match: XP_022947282.1 (E3 ubiquitin-protein ligase RDUF2-like [Cucurbita moschata])

HSP 1 Score: 684.1 bits (1764), Expect = 2.7e-193
Identity = 378/378 (100.00%), Postives = 378/378 (100.00%), Query Frame = 0


Query: 1   MASGTASYWCYRCNRFVRAWVQDTISCPYCDGGFVEAIETASSLPAANLHRRFSPSAIHT 60
           MASGTASYWCYRCNRFVRAWVQDTISCPYCDGGFVEAIETASSLPAANLHRRFSPSAIHT
Sbjct: 1   MASGTASYWCYRCNRFVRAWVQDTISCPYCDGGFVEAIETASSLPAANLHRRFSPSAIHT 60

Query: 61  LDQDPFQSPRLSTRRSRRRLGDRSTFNPVVVLRXXXXXXXXXXXXXXXXXXXXXXDDGAG 120
           LDQDPFQSPRLSTRRSRRRLGDRSTFNPVVVLRXXXXXXXXXXXXXXXXXXXXXXDDGAG
Sbjct: 61  LDQDPFQSPRLSTRRSRRRLGDRSTFNPVVVLRXXXXXXXXXXXXXXXXXXXXXXDDGAG 120

Query: 121 SGLRPVPATMSEFLMGTGFDRLLEQLAQLEINGFGRSENPPASKAAVESMPTIEILESHV 180
           SGLRPVPATMSEFLMGTGFDRLLEQLAQLEINGFGRSENPPASKAAVESMPTIEILESHV
Sbjct: 121 SGLRPVPATMSEFLMGTGFDRLLEQLAQLEINGFGRSENPPASKAAVESMPTIEILESHV 180

Query: 181 DSDSHCAVCKEAFEIGTEAREMPCKHIYHSDCIIPWLSMRNSCPVCRHELPSERVSPAGG 240
           DSDSHCAVCKEAFEIGTEAREMPCKHIYHSDCIIPWLSMRNSCPVCRHELPSERVSPAGG
Sbjct: 181 DSDSHCAVCKEAFEIGTEAREMPCKHIYHSDCIIPWLSMRNSCPVCRHELPSERVSPAGG 240

Query: 241 VSDRVVDEETVGLTIWRLPGGGFAVGRFTGGRLTGERDPPAVYTEMDGGFNANGAPRRVS 300
           VSDRVVDEETVGLTIWRLPGGGFAVGRFTGGRLTGERDPPAVYTEMDGGFNANGAPRRVS
Sbjct: 241 VSDRVVDEETVGLTIWRLPGGGFAVGRFTGGRLTGERDPPAVYTEMDGGFNANGAPRRVS 300

Query: 301 WASRRSRGRENRGIGRTFRNIFSFFGRLRSSNSSSSXXXXXXXXXXXXXXXXXXSVFSRY 360
           WASRRSRGRENRGIGRTFRNIFSFFGRLRSSNSSSSXXXXXXXXXXXXXXXXXXSVFSRY
Sbjct: 301 WASRRSRGRENRGIGRTFRNIFSFFGRLRSSNSSSSXXXXXXXXXXXXXXXXXXSVFSRY 360

Query: 361 LRRPNRTWLENHTENGRW 379
           LRRPNRTWLENHTENGRW
Sbjct: 361 LRRPNRTWLENHTENGRW 378

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BLAST of Carg26581 vs. NCBI nr
Match: XP_023532253.1 (E3 ubiquitin-protein ligase RDUF2-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 682.6 bits (1760), Expect = 7.8e-193
Identity = 376/378 (99.47%), Postives = 377/378 (99.74%), Query Frame = 0


Query: 1   MASGTASYWCYRCNRFVRAWVQDTISCPYCDGGFVEAIETASSLPAANLHRRFSPSAIHT 60
           MASGTASYWCYRCNRFVRAWVQDTISCPYCDGGFVEAIETASSLPAANLHRRFSPSAIHT
Sbjct: 1   MASGTASYWCYRCNRFVRAWVQDTISCPYCDGGFVEAIETASSLPAANLHRRFSPSAIHT 60

Query: 61  LDQDPFQSPRLSTRRSRRRLGDRSTFNPVVVLRXXXXXXXXXXXXXXXXXXXXXXDDGAG 120
           LDQDPFQSPRLSTRRSRRRLGDRSTFNPVVVLRXXXXXXXXXXXXXXXXXXXXXXDDGAG
Sbjct: 61  LDQDPFQSPRLSTRRSRRRLGDRSTFNPVVVLRXXXXXXXXXXXXXXXXXXXXXXDDGAG 120

Query: 121 SGLRPVPATMSEFLMGTGFDRLLEQLAQLEINGFGRSENPPASKAAVESMPTIEILESHV 180
           SGLRPVPATMSEFLMGTGFDRLLEQLAQLEINGFGRSENPPASKAAVESMPTIEILESHV
Sbjct: 121 SGLRPVPATMSEFLMGTGFDRLLEQLAQLEINGFGRSENPPASKAAVESMPTIEILESHV 180

Query: 181 DSDSHCAVCKEAFEIGTEAREMPCKHIYHSDCIIPWLSMRNSCPVCRHELPSERVSPAGG 240
           DSDSHCAVCKEAFEIGTEAREMPCKHIYHSDCIIPWLSMRNSCPVCRHELPSERVSPAGG
Sbjct: 181 DSDSHCAVCKEAFEIGTEAREMPCKHIYHSDCIIPWLSMRNSCPVCRHELPSERVSPAGG 240

Query: 241 VSDRVVDEETVGLTIWRLPGGGFAVGRFTGGRLTGERDPPAVYTEMDGGFNANGAPRRVS 300
           VSDRVVDEETVGLTIWRLPGGGFAVGRFTGGRLTGERDPPAVYTEMDGGFNANGAPRRVS
Sbjct: 241 VSDRVVDEETVGLTIWRLPGGGFAVGRFTGGRLTGERDPPAVYTEMDGGFNANGAPRRVS 300

Query: 301 WASRRSRGRENRGIGRTFRNIFSFFGRLRSSNSSSSXXXXXXXXXXXXXXXXXXSVFSRY 360
           WASRRSRGRENRGIGRTFRNIFSFFGRLRSSNSSSS XXXXXXXXXXXXXXXXXSVFSRY
Sbjct: 301 WASRRSRGRENRGIGRTFRNIFSFFGRLRSSNSSSSLXXXXXXXXXXXXXXXXXSVFSRY 360

Query: 361 LRRPNRTWLENHTENGRW 379
           LRRPNR+WLENHTENGRW
Sbjct: 361 LRRPNRSWLENHTENGRW 378

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BLAST of Carg26581 vs. NCBI nr
Match: XP_023007108.1 (E3 ubiquitin-protein ligase RDUF2-like [Cucurbita maxima])

HSP 1 Score: 679.9 bits (1753), Expect = 5.1e-192
Identity = 376/378 (99.47%), Postives = 376/378 (99.47%), Query Frame = 0


Query: 1   MASGTASYWCYRCNRFVRAWVQDTISCPYCDGGFVEAIETASSLPAANLHRRFSPSAIHT 60
           MASGTASYWCYRCNRFVRAWVQDTISCPYCDGGFVEAIETASSLPAANLHRRFSPSAIHT
Sbjct: 1   MASGTASYWCYRCNRFVRAWVQDTISCPYCDGGFVEAIETASSLPAANLHRRFSPSAIHT 60

Query: 61  LDQDPFQSPRLSTRRSRRRLGDRSTFNPVVVLRXXXXXXXXXXXXXXXXXXXXXXDDGAG 120
           LDQDPFQSPRLSTRRSRRRLGDRSTFNPVVVLRXXXXXXXXXXXXXXXXXXXXXXDDGAG
Sbjct: 61  LDQDPFQSPRLSTRRSRRRLGDRSTFNPVVVLRXXXXXXXXXXXXXXXXXXXXXXDDGAG 120

Query: 121 SGLRPVPATMSEFLMGTGFDRLLEQLAQLEINGFGRSENPPASKAAVESMPTIEILESHV 180
           SGLRPVPATMSEFLMGTGFDRLLEQLAQLEINGFGRSENPPASKAAVESMPTIEILESHV
Sbjct: 121 SGLRPVPATMSEFLMGTGFDRLLEQLAQLEINGFGRSENPPASKAAVESMPTIEILESHV 180

Query: 181 DSDSHCAVCKEAFEIGTEAREMPCKHIYHSDCIIPWLSMRNSCPVCRHELPSERVSPAGG 240
           DSDSHCAVCKEAF IGTEAREMPCKHIYHSDCIIPWLSMRNSCPVCRHELPSERVSPAGG
Sbjct: 181 DSDSHCAVCKEAFVIGTEAREMPCKHIYHSDCIIPWLSMRNSCPVCRHELPSERVSPAGG 240

Query: 241 VSDRVVDEETVGLTIWRLPGGGFAVGRFTGGRLTGERDPPAVYTEMDGGFNANGAPRRVS 300
           VSDRVVDEETVGLTIWRLPGGGFAVGRFTGGRLTGERDPPAVYTEMDGGFNANG PRRVS
Sbjct: 241 VSDRVVDEETVGLTIWRLPGGGFAVGRFTGGRLTGERDPPAVYTEMDGGFNANGVPRRVS 300

Query: 301 WASRRSRGRENRGIGRTFRNIFSFFGRLRSSNSSSSXXXXXXXXXXXXXXXXXXSVFSRY 360
           WASRRSRGRENRGIGRTFRNIFSFFGRLRSSNSSSSXXXXXXXXXXXXXXXXXXSVFSRY
Sbjct: 301 WASRRSRGRENRGIGRTFRNIFSFFGRLRSSNSSSSXXXXXXXXXXXXXXXXXXSVFSRY 360

Query: 361 LRRPNRTWLENHTENGRW 379
           LRRPNRTWLENHTENGRW
Sbjct: 361 LRRPNRTWLENHTENGRW 378

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BLAST of Carg26581 vs. NCBI nr
Match: XP_004143127.1 (PREDICTED: E3 ubiquitin-protein ligase RING1 [Cucumis sativus])

HSP 1 Score: 620.2 bits (1598), Expect = 4.8e-174
Identity = 327/379 (86.28%), Postives = 335/379 (88.39%), Query Frame = 0


Query: 1   MASGTASYWCYRCNRFVRAWVQDTISCPYCDGGFVEAIETASSLPAANLHRRFSPSAIHT 60
           M++GTASYWCYRCNRFVRAW QD+I+CPYCDGGFVEAIETASSLP +NLHRR SPSAIHT
Sbjct: 1   MSTGTASYWCYRCNRFVRAWAQDSITCPYCDGGFVEAIETASSLPPSNLHRRLSPSAIHT 60

Query: 61  LDQDPFQSPRLSTRRSRRRLGDRSTFNPVVVLRXXXXXXXXXXXXXXXXXXXXXXDDGAG 120
           LDQD FQSPRLSTRRSRRRLGDRSTFNPVVVLR                      DDGAG
Sbjct: 61  LDQDSFQSPRLSTRRSRRRLGDRSTFNPVVVLR-GSADAGDVVGGGERNSFDIYYDDGAG 120

Query: 121 SGLRPVPATMSEFLMGTGFDRLLEQLAQLEINGFGRSENPPASKAAVESMPTIEILESHV 180
           SGLRPVPATMSEFLMGTGFDRLLEQLAQLEINGFGRSENPPASKAAVESMPTIEILESHV
Sbjct: 121 SGLRPVPATMSEFLMGTGFDRLLEQLAQLEINGFGRSENPPASKAAVESMPTIEILESHV 180

Query: 181 DSDSHCAVCKEAFEIGTEAREMPCKHIYHSDCIIPWLSMRNSCPVCRHELPSERVSPAGG 240
           DSDSHCAVCKEAFEIGTEAREMPCKHIYHS+CIIPWLSMRNSCPVCRHELPSERVSPAGG
Sbjct: 181 DSDSHCAVCKEAFEIGTEAREMPCKHIYHSECIIPWLSMRNSCPVCRHELPSERVSPAGG 240

Query: 241 VSDRVVDEETVGLTIWRLPGGGFAVGRFTGGRLTGERDPPAVYTEMDGGFNANGAPRRVS 300
           VSDRVVDEETVGLTIWRLPGGGFAVGRF+GGRL GERDPPAVYTEMDGGFN NG PRRVS
Sbjct: 241 VSDRVVDEETVGLTIWRLPGGGFAVGRFSGGRLAGERDPPAVYTEMDGGFNGNGVPRRVS 300

Query: 301 WASRRSRGRENRGIGRTFRNIFSFFGRLRSSNSSSSXXXXXXXXXXXXXXXXXXSVFSRY 360
           WASRRSRGRE+RGIGRTFRNIFSFFGR         XXXXXXXXXXXXXXXXXX VFSRY
Sbjct: 301 WASRRSRGRESRGIGRTFRNIFSFFGRFXXXXXXXXXXXXXXXXXXXXXXXXXXXVFSRY 360

Query: 361 LRRPNRTW-LENHTENGRW 379
           LRR NR W LEN  ENGRW
Sbjct: 361 LRRQNRAWVLENQNENGRW 378

[Close]

BLAST of Carg26581 vs. NCBI nr
Match: KGN47134.1 (hypothetical protein Csa_6G190250 [Cucumis sativus])

HSP 1 Score: 620.2 bits (1598), Expect = 4.8e-174
Identity = 327/379 (86.28%), Postives = 335/379 (88.39%), Query Frame = 0


Query: 1   MASGTASYWCYRCNRFVRAWVQDTISCPYCDGGFVEAIETASSLPAANLHRRFSPSAIHT 60
           M++GTASYWCYRCNRFVRAW QD+I+CPYCDGGFVEAIETASSLP +NLHRR SPSAIHT
Sbjct: 39  MSTGTASYWCYRCNRFVRAWAQDSITCPYCDGGFVEAIETASSLPPSNLHRRLSPSAIHT 98

Query: 61  LDQDPFQSPRLSTRRSRRRLGDRSTFNPVVVLRXXXXXXXXXXXXXXXXXXXXXXDDGAG 120
           LDQD FQSPRLSTRRSRRRLGDRSTFNPVVVLR                      DDGAG
Sbjct: 99  LDQDSFQSPRLSTRRSRRRLGDRSTFNPVVVLR-GSADAGDVVGGGERNSFDIYYDDGAG 158

Query: 121 SGLRPVPATMSEFLMGTGFDRLLEQLAQLEINGFGRSENPPASKAAVESMPTIEILESHV 180
           SGLRPVPATMSEFLMGTGFDRLLEQLAQLEINGFGRSENPPASKAAVESMPTIEILESHV
Sbjct: 159 SGLRPVPATMSEFLMGTGFDRLLEQLAQLEINGFGRSENPPASKAAVESMPTIEILESHV 218

Query: 181 DSDSHCAVCKEAFEIGTEAREMPCKHIYHSDCIIPWLSMRNSCPVCRHELPSERVSPAGG 240
           DSDSHCAVCKEAFEIGTEAREMPCKHIYHS+CIIPWLSMRNSCPVCRHELPSERVSPAGG
Sbjct: 219 DSDSHCAVCKEAFEIGTEAREMPCKHIYHSECIIPWLSMRNSCPVCRHELPSERVSPAGG 278

Query: 241 VSDRVVDEETVGLTIWRLPGGGFAVGRFTGGRLTGERDPPAVYTEMDGGFNANGAPRRVS 300
           VSDRVVDEETVGLTIWRLPGGGFAVGRF+GGRL GERDPPAVYTEMDGGFN NG PRRVS
Sbjct: 279 VSDRVVDEETVGLTIWRLPGGGFAVGRFSGGRLAGERDPPAVYTEMDGGFNGNGVPRRVS 338

Query: 301 WASRRSRGRENRGIGRTFRNIFSFFGRLRSSNSSSSXXXXXXXXXXXXXXXXXXSVFSRY 360
           WASRRSRGRE+RGIGRTFRNIFSFFGR         XXXXXXXXXXXXXXXXXX VFSRY
Sbjct: 339 WASRRSRGRESRGIGRTFRNIFSFFGRFXXXXXXXXXXXXXXXXXXXXXXXXXXXVFSRY 398

Query: 361 LRRPNRTW-LENHTENGRW 379
           LRR NR W LEN  ENGRW
Sbjct: 399 LRRQNRAWVLENQNENGRW 416

[Close]

BLAST of Carg26581 vs. TAIR10
Match: AT3G46620.1 (zinc finger (C3HC4-type RING finger) family protein)

HSP 1 Score: 265.8 bits (678), Expect = 4.1e-71
Identity = 159/345 (46.09%), Postives = 203/345 (58.84%), Query Frame = 0


Query: 10  CYRCNRFVRAWV-QDT---ISCPYCDGGFVEAIETASSLPAANLHRRFSPSAIHTLDQD- 69
           CY C RF+  W  QD    + CPYC+GGF+E IE +S+   A +    S   + ++++  
Sbjct: 33  CYSCTRFISVWEDQDANAGVLCPYCNGGFIEEIEDSSNSTVAAIPA--STPEVRSVEETH 92

Query: 70  -PFQSPRLSTRRSRRRLGDRSTFNPVVVLRXXXXXXXXXXXXXXXXXXXXXXDDGAGSGL 129
                                         XXXXXXXXX             DDG+GSGL
Sbjct: 93  RSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGATRERRAYEFYYDDGSGSGL 152

Query: 130 RPVPATMSEFLMGTGFDRLLEQLAQLEI--NGFGRSENPPASKAAVESMPTIEILESHVD 189
           RP+P ++SE LMG+GF+RLLEQL+Q+E   NG GRS NPPASK+A+ES+P +EI + H  
Sbjct: 153 RPLPDSVSEILMGSGFERLLEQLSQIEASGNGIGRSGNPPASKSAIESLPRVEISDCHTK 212

Query: 190 SDSHCAVCKEAFEIGTEAREMPCKHIYHSDCIIPWLSMRNSCPVCRHELPSERVSPAGGV 249
           ++++CAVC E FE G E REMPCKHI+H DCI+PWLS+RNSCPVCR ELPS+ +  +   
Sbjct: 213 AEANCAVCTEVFEAGIEGREMPCKHIFHGDCIVPWLSIRNSCPVCRFELPSDPIQRSN-- 272

Query: 250 SDRVVDEETVGLTIWRLPGGGFAVGRFTGGRLTGERDPPAVYTEMD-GGFNANGAPRRVS 309
                +E  VG+TIWRLPGGGFAVGRF  G   GER  P V TEMD GG  +N  PRR+S
Sbjct: 273 ----EEEHAVGMTIWRLPGGGFAVGRFNAGVREGERILPVVLTEMDGGGLGSNEGPRRIS 332

Query: 310 WA-------SRRSRGRENRG--IGRTFRNIFSFFGRLRSSNSSSS 337
           W          R+ GR   G  + R  R + SF  R+R S  SS+
Sbjct: 333 WVRAHETPEMSRNGGRSGNGGRLRRAVRGMVSFMRRVRPSRGSSN 369

[Close]

BLAST of Carg26581 vs. TAIR10
Match: AT5G59550.1 (zinc finger (C3HC4-type RING finger) family protein)

HSP 1 Score: 262.7 bits (670), Expect = 3.5e-70
Identity = 144/309 (46.60%), Postives = 187/309 (60.52%), Query Frame = 0


Query: 13  CNRFVRAWVQD------TISCPYCDGGFVEAIETASSLPAANLHRRFSPSAIHTLDQDPF 72
           C RFV  W         +++CP+CDGGF+E I  +SS  AA      + + + ++     
Sbjct: 23  CTRFVSVWADQGTTTVGSVACPHCDGGFIEQINDSSS--AATELTIPASTEVRSI----- 82

Query: 73  QSPRLSTRRSRRRLGDRSTFNPVVVLR---XXXXXXXXXXXXXXXXXXXXXXDDGAGSGL 132
            +              R +FNPV+VL+                         DDG+GSGL
Sbjct: 83  -NXXXXXXXXXXXXXXRPSFNPVIVLQGGAGEREEGEEGDAARDRRAFEFYYDDGSGSGL 142

Query: 133 RPVPATMSEFLMGTGFDRLLEQLAQLEIN--GFGRSENPPASKAAVESMPTIEILESHVD 192
           RP+P ++SE LMG+GF+RLLEQL+Q+E +  G GRS NPPASK+A+ES+P +EI + H+ 
Sbjct: 143 RPLPDSVSEILMGSGFERLLEQLSQIEASATGIGRSGNPPASKSAIESLPRVEISDCHIG 202

Query: 193 SDSHCAVCKEAFEIGTEAREMPCKHIYHSDCIIPWLSMRNSCPVCRHELPSERVSPAGGV 252
           S+++CAVC E FE  TEAREMPCKH++H DCI+PWLS+RNSCPVCR ELPSE        
Sbjct: 203 SEANCAVCTEIFETETEAREMPCKHLFHDDCIVPWLSIRNSCPVCRFELPSE----PNRR 262

Query: 253 SDRVVDEETVGLTIWRLPGGGFAVGRFTGGRLTGERDPPAVYTEMDGG--FNANGAPRRV 309
           S+   ++  VG+TIWRLPGGGFAVGRF      GER  P V TEMDGG   N+   PRR+
Sbjct: 263 SNNNEEDNAVGMTIWRLPGGGFAVGRFNAAMRDGERVLPVVLTEMDGGGIGNSQDGPRRI 317

[Close]

BLAST of Carg26581 vs. TAIR10
Match: AT2G39720.1 (RING-H2 finger C2A)

HSP 1 Score: 260.4 bits (664), Expect = 1.7e-69
Identity = 153/343 (44.61%), Postives = 191/343 (55.69%), Query Frame = 0


Query: 1   MASGTASYWCYRCNRFVRAWVQDTISCPYCDGGFVEAI-ETASSLPAANLHRRFSPSAIH 60
           MASG  SYWCY C+RFV  WV D+ISCP CDGGF+E I E     P+ +           
Sbjct: 1   MASG--SYWCYSCSRFV--WVSDSISCPDCDGGFLELIQEPLDFTPSDSFXXXXXXXXXX 60

Query: 61  TLDQDPFQSPRLSTRRSRRRLGDRSTFNPVVVLR----------------XXXXXXXXXX 120
                           S     D S   P +V R                          
Sbjct: 61  XXXXXXXXXXXXXXXXSMH--ADNSP-TPTIVTRTXXXXXXXXXXXXRGSAAAPSSDVVS 120

Query: 121 XXXXXXXXXXXXDDGAGSGLRPVPATMSEFLMGTGFDRLLEQLAQLEIN---GFGRSENP 180
                       DDG  SGLRP+P +M+EFL+G+GFDRLL+Q++Q+E+N        E+P
Sbjct: 121 EGLDRSAFQMYYDDGTDSGLRPLPPSMTEFLLGSGFDRLLDQISQIELNTNRNLRSCEHP 180

Query: 181 PASKAAVESMPTIEILESHV--DSDSHCAVCKEAFEIGTEAREMPCKHIYHSDCIIPWLS 240
           PASK+A+E++P IEI  +H+  DS SHCAVCKE F + + AREMPC HIYH DCI+PWL+
Sbjct: 181 PASKSAIEALPLIEIDPTHLLSDSQSHCAVCKENFVLKSSAREMPCNHIYHPDCILPWLA 240

Query: 241 MRNSCPVCRHELPSERVSPAGGVSDRVV-------DEETVGLTIWRLPGGGFAVGRFTGG 300
           +RNSCPVCRHELP+E ++   G +   V       ++   GLTIWRLPGGGFAVGR  GG
Sbjct: 241 IRNSCPVCRHELPAEDLTDGTGAALTAVTATAEEEEDSAAGLTIWRLPGGGFAVGRIPGG 300

Query: 301 RLTGERDPPAVYTEMDGG-FNANGAPRRVSWASRRSRGRENRG 314
              G+R  P VYTE+DGG       PRRV+W SRR  GR+  G
Sbjct: 301 WRGGDRMMPVVYTEVDGGRLGDERLPRRVAWGSRRG-GRDGGG 335

[Close]

BLAST of Carg26581 vs. TAIR10
Match: AT2G40830.2 (RING-H2 finger C1A)

HSP 1 Score: 145.2 bits (365), Expect = 8.2e-35
Identity = 86/241 (35.68%), Postives = 122/241 (50.62%), Query Frame = 0


Query: 1   MASGTASYWCYRCNRFVRAWVQDTISCPYCDGGFVEAIETASSLP--AANLHRRF--SPS 60
           M+S   ++WC+RC R VR   Q+ + C YC GGFVE ++ A + P      HR       
Sbjct: 1   MSSSRNTHWCHRCQRAVRLHGQEPV-CFYCGGGFVEELDMAQASPFDMFRSHRGVVERDQ 60

Query: 61  AIHTLDQ-DPFQSPRLSTRRSRRRLGDRSTFN---PVVVLRXXXXXXXXXXXXXXXXXXX 120
               +D    F   RL+ R   R +  R+  +       L                    
Sbjct: 61  TFDLMDAFSVFMRNRLAERSHDREIRGRTISSGPENFPGLAPLLIFGGQVPYRLTGDNAV 120

Query: 121 XXXDDGAGSGLRPVPATMSEFLMGTGFDRLLEQLAQLEINGFGRSENPPASKAAVESMPT 180
               +G   G+        ++  G G + L EQL+     G  R   PPA ++A++++PT
Sbjct: 121 EALFNGGSPGIGITRGNTGDYFFGPGLEELFEQLSA----GTTRRGPPPAPRSAIDALPT 180

Query: 181 IEILESHV-DSDSHCAVCKEAFEIGTEAREMPCKHIYHSDCIIPWLSMRNSCPVCRHELP 233
           I+I + H+  SDS+C VCK+ FE+G+EA++MPC HIYHSDCI+PWL   NSCPVCR ELP
Sbjct: 181 IKIAQRHLRSSDSNCPVCKDEFELGSEAKQMPCNHIYHSDCIVPWLVQHNSCPVCRQELP 236

[Close]

BLAST of Carg26581 vs. TAIR10
Match: AT3G56580.2 (RING/U-box superfamily protein)

HSP 1 Score: 144.4 bits (363), Expect = 1.4e-34
Identity = 86/243 (35.39%), Postives = 124/243 (51.03%), Query Frame = 0


Query: 1   MASGTASYWCYRCNRFVRAWVQDTISCPYCDGGFVEAIETASSLPAANLHRRFSPSAIHT 60
           M+S   ++WC+RC R V    +D + C YC GGFVE I+   S    ++ R   P+    
Sbjct: 1   MSSIRNTHWCHRCQRAVWLRARDAV-CSYCGGGFVEEIDIGPSRAHRDVER--DPTFDLM 60

Query: 61  LDQDPFQSPRLSTRRSRRRLGDR---------STFNPVVVLRXXXXXXXXXXXXXXXXXX 120
                F   RL+ R   R +  R         S   P+++                    
Sbjct: 61  EAFSAFMRSRLAERSYDREISGRLGSAGSESFSNLAPLLIFGGQAPFRLAGGDNSSVEAF 120

Query: 121 XXXXDDGAGSGLRPVPAT-MSEFLMGTGFDRLLEQLAQLEINGFGRSENPPASKAAVESM 180
                +GA  G+     T   ++  G G + L+EQL+    +G      PPA K++++++
Sbjct: 121 V----NGAAPGIGIARGTNAGDYFFGPGLEELIEQLS----SGTHHRGPPPAPKSSIDAL 180

Query: 181 PTIEILESHV-DSDSHCAVCKEAFEIGTEAREMPCKHIYHSDCIIPWLSMRNSCPVCRHE 233
           PTI+I + H+  SDSHC VCK+ FE+ +EA++MPC HIYHSDCI+PWL   NSCPVCR E
Sbjct: 181 PTIKITQKHLKSSDSHCPVCKDEFELKSEAKQMPCHHIYHSDCIVPWLVQHNSCPVCRKE 232

[Close]

BLAST of Carg26581 vs. Swiss-Prot
Match: sp|Q9SNB6|RDUF1_ARATH (E3 ubiquitin-protein ligase RDUF1 OS=Arabidopsis thaliana OX=3702 GN=RDUF1 PE=1 SV=1)

HSP 1 Score: 265.8 bits (678), Expect = 7.5e-70
Identity = 159/345 (46.09%), Postives = 203/345 (58.84%), Query Frame = 0


Query: 10  CYRCNRFVRAWV-QDT---ISCPYCDGGFVEAIETASSLPAANLHRRFSPSAIHTLDQD- 69
           CY C RF+  W  QD    + CPYC+GGF+E IE +S+   A +    S   + ++++  
Sbjct: 33  CYSCTRFISVWEDQDANAGVLCPYCNGGFIEEIEDSSNSTVAAIPA--STPEVRSVEETH 92

Query: 70  -PFQSPRLSTRRSRRRLGDRSTFNPVVVLRXXXXXXXXXXXXXXXXXXXXXXDDGAGSGL 129
                                         XXXXXXXXX             DDG+GSGL
Sbjct: 93  RSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGATRERRAYEFYYDDGSGSGL 152

Query: 130 RPVPATMSEFLMGTGFDRLLEQLAQLEI--NGFGRSENPPASKAAVESMPTIEILESHVD 189
           RP+P ++SE LMG+GF+RLLEQL+Q+E   NG GRS NPPASK+A+ES+P +EI + H  
Sbjct: 153 RPLPDSVSEILMGSGFERLLEQLSQIEASGNGIGRSGNPPASKSAIESLPRVEISDCHTK 212

Query: 190 SDSHCAVCKEAFEIGTEAREMPCKHIYHSDCIIPWLSMRNSCPVCRHELPSERVSPAGGV 249
           ++++CAVC E FE G E REMPCKHI+H DCI+PWLS+RNSCPVCR ELPS+ +  +   
Sbjct: 213 AEANCAVCTEVFEAGIEGREMPCKHIFHGDCIVPWLSIRNSCPVCRFELPSDPIQRSN-- 272

Query: 250 SDRVVDEETVGLTIWRLPGGGFAVGRFTGGRLTGERDPPAVYTEMD-GGFNANGAPRRVS 309
                +E  VG+TIWRLPGGGFAVGRF  G   GER  P V TEMD GG  +N  PRR+S
Sbjct: 273 ----EEEHAVGMTIWRLPGGGFAVGRFNAGVREGERILPVVLTEMDGGGLGSNEGPRRIS 332

Query: 310 WA-------SRRSRGRENRG--IGRTFRNIFSFFGRLRSSNSSSS 337
           W          R+ GR   G  + R  R + SF  R+R S  SS+
Sbjct: 333 WVRAHETPEMSRNGGRSGNGGRLRRAVRGMVSFMRRVRPSRGSSN 369

[Close]

BLAST of Carg26581 vs. Swiss-Prot
Match: sp|Q940T5|RDUF2_ARATH (E3 ubiquitin-protein ligase RDUF2 OS=Arabidopsis thaliana OX=3702 GN=DURF2 PE=1 SV=1)

HSP 1 Score: 262.7 bits (670), Expect = 6.3e-69
Identity = 144/309 (46.60%), Postives = 187/309 (60.52%), Query Frame = 0


Query: 13  CNRFVRAWVQD------TISCPYCDGGFVEAIETASSLPAANLHRRFSPSAIHTLDQDPF 72
           C RFV  W         +++CP+CDGGF+E I  +SS  AA      + + + ++     
Sbjct: 23  CTRFVSVWADQGTTTVGSVACPHCDGGFIEQINDSSS--AATELTIPASTEVRSI----- 82

Query: 73  QSPRLSTRRSRRRLGDRSTFNPVVVLR---XXXXXXXXXXXXXXXXXXXXXXDDGAGSGL 132
            +              R +FNPV+VL+                         DDG+GSGL
Sbjct: 83  -NXXXXXXXXXXXXXXRPSFNPVIVLQGGAGEREEGEEGDAARDRRAFEFYYDDGSGSGL 142

Query: 133 RPVPATMSEFLMGTGFDRLLEQLAQLEIN--GFGRSENPPASKAAVESMPTIEILESHVD 192
           RP+P ++SE LMG+GF+RLLEQL+Q+E +  G GRS NPPASK+A+ES+P +EI + H+ 
Sbjct: 143 RPLPDSVSEILMGSGFERLLEQLSQIEASATGIGRSGNPPASKSAIESLPRVEISDCHIG 202

Query: 193 SDSHCAVCKEAFEIGTEAREMPCKHIYHSDCIIPWLSMRNSCPVCRHELPSERVSPAGGV 252
           S+++CAVC E FE  TEAREMPCKH++H DCI+PWLS+RNSCPVCR ELPSE        
Sbjct: 203 SEANCAVCTEIFETETEAREMPCKHLFHDDCIVPWLSIRNSCPVCRFELPSE----PNRR 262

Query: 253 SDRVVDEETVGLTIWRLPGGGFAVGRFTGGRLTGERDPPAVYTEMDGG--FNANGAPRRV 309
           S+   ++  VG+TIWRLPGGGFAVGRF      GER  P V TEMDGG   N+   PRR+
Sbjct: 263 SNNNEEDNAVGMTIWRLPGGGFAVGRFNAAMRDGERVLPVVLTEMDGGGIGNSQDGPRRI 317

[Close]

BLAST of Carg26581 vs. Swiss-Prot
Match: sp|O22283|RHC2A_ARATH (Probable E3 ubiquitin-protein ligase RHC2A OS=Arabidopsis thaliana OX=3702 GN=RHC2A PE=2 SV=1)

HSP 1 Score: 260.4 bits (664), Expect = 3.1e-68
Identity = 153/343 (44.61%), Postives = 191/343 (55.69%), Query Frame = 0


Query: 1   MASGTASYWCYRCNRFVRAWVQDTISCPYCDGGFVEAI-ETASSLPAANLHRRFSPSAIH 60
           MASG  SYWCY C+RFV  WV D+ISCP CDGGF+E I E     P+ +           
Sbjct: 1   MASG--SYWCYSCSRFV--WVSDSISCPDCDGGFLELIQEPLDFTPSDSFXXXXXXXXXX 60

Query: 61  TLDQDPFQSPRLSTRRSRRRLGDRSTFNPVVVLR----------------XXXXXXXXXX 120
                           S     D S   P +V R                          
Sbjct: 61  XXXXXXXXXXXXXXXXSMH--ADNSP-TPTIVTRTXXXXXXXXXXXXRGSAAAPSSDVVS 120

Query: 121 XXXXXXXXXXXXDDGAGSGLRPVPATMSEFLMGTGFDRLLEQLAQLEIN---GFGRSENP 180
                       DDG  SGLRP+P +M+EFL+G+GFDRLL+Q++Q+E+N        E+P
Sbjct: 121 EGLDRSAFQMYYDDGTDSGLRPLPPSMTEFLLGSGFDRLLDQISQIELNTNRNLRSCEHP 180

Query: 181 PASKAAVESMPTIEILESHV--DSDSHCAVCKEAFEIGTEAREMPCKHIYHSDCIIPWLS 240
           PASK+A+E++P IEI  +H+  DS SHCAVCKE F + + AREMPC HIYH DCI+PWL+
Sbjct: 181 PASKSAIEALPLIEIDPTHLLSDSQSHCAVCKENFVLKSSAREMPCNHIYHPDCILPWLA 240

Query: 241 MRNSCPVCRHELPSERVSPAGGVSDRVV-------DEETVGLTIWRLPGGGFAVGRFTGG 300
           +RNSCPVCRHELP+E ++   G +   V       ++   GLTIWRLPGGGFAVGR  GG
Sbjct: 241 IRNSCPVCRHELPAEDLTDGTGAALTAVTATAEEEEDSAAGLTIWRLPGGGFAVGRIPGG 300

Query: 301 RLTGERDPPAVYTEMDGG-FNANGAPRRVSWASRRSRGRENRG 314
              G+R  P VYTE+DGG       PRRV+W SRR  GR+  G
Sbjct: 301 WRGGDRMMPVVYTEVDGGRLGDERLPRRVAWGSRRG-GRDGGG 335

[Close]

BLAST of Carg26581 vs. Swiss-Prot
Match: sp|O22197|RHC1A_ARATH (Probable E3 ubiquitin-protein ligase RHC1A OS=Arabidopsis thaliana OX=3702 GN=RHC1A PE=2 SV=1)

HSP 1 Score: 145.2 bits (365), Expect = 1.5e-33
Identity = 86/241 (35.68%), Postives = 122/241 (50.62%), Query Frame = 0


Query: 1   MASGTASYWCYRCNRFVRAWVQDTISCPYCDGGFVEAIETASSLP--AANLHRRF--SPS 60
           M+S   ++WC+RC R VR   Q+ + C YC GGFVE ++ A + P      HR       
Sbjct: 1   MSSSRNTHWCHRCQRAVRLHGQEPV-CFYCGGGFVEELDMAQASPFDMFRSHRGVVERDQ 60

Query: 61  AIHTLDQ-DPFQSPRLSTRRSRRRLGDRSTFN---PVVVLRXXXXXXXXXXXXXXXXXXX 120
               +D    F   RL+ R   R +  R+  +       L                    
Sbjct: 61  TFDLMDAFSVFMRNRLAERSHDREIRGRTISSGPENFPGLAPLLIFGGQVPYRLTGDNAV 120

Query: 121 XXXDDGAGSGLRPVPATMSEFLMGTGFDRLLEQLAQLEINGFGRSENPPASKAAVESMPT 180
               +G   G+        ++  G G + L EQL+     G  R   PPA ++A++++PT
Sbjct: 121 EALFNGGSPGIGITRGNTGDYFFGPGLEELFEQLSA----GTTRRGPPPAPRSAIDALPT 180

Query: 181 IEILESHV-DSDSHCAVCKEAFEIGTEAREMPCKHIYHSDCIIPWLSMRNSCPVCRHELP 233
           I+I + H+  SDS+C VCK+ FE+G+EA++MPC HIYHSDCI+PWL   NSCPVCR ELP
Sbjct: 181 IKIAQRHLRSSDSNCPVCKDEFELGSEAKQMPCNHIYHSDCIVPWLVQHNSCPVCRQELP 236

[Close]

BLAST of Carg26581 vs. Swiss-Prot
Match: sp|P0CH30|RING1_GOSHI (E3 ubiquitin-protein ligase RING1 OS=Gossypium hirsutum OX=3635 GN=RING1 PE=1 SV=1)

HSP 1 Score: 144.8 bits (364), Expect = 1.9e-33
Identity = 94/279 (33.69%), Postives = 139/279 (49.82%), Query Frame = 0


Query: 8   YWCYRCNRFVRAWVQDTIS---CPYCDGGFVEAIETASSLPAANLHRRF---SPSAIHTL 67
           ++CY+CNR V   +    S   CP C+ GF+E  +     P  N    F   +P++I   
Sbjct: 23  FFCYQCNRTVNVTISPPSSDPTCPICNEGFLEEYDN----PNPNQGSGFLNPNPNSIPFH 82

Query: 68  D-----QDPFQS------------------------PRLS--TRRSRRRLGDRSTFNPVV 127
           D      DPF S                        P LS  TR  R   GD   F+P  
Sbjct: 83  DLFLTLSDPFASLLPLLFPSXXXXXXXXXXXIDPNNPSLSGPTRSGR---GDPFAFDPFT 142

Query: 128 VLRXXXXXXXXXXXXXXXXXXXXXXDDGAGSGLRPVPATMSEFLMGTGFDRLLEQLAQLE 187
            ++                      D G       +PA + ++ +G G ++L++QLA+ +
Sbjct: 143 FIQNHLNDLRSSGAQIEFVIQNNPSDQGF-----RLPANIGDYFIGPGLEQLIQQLAEND 202

Query: 188 INGFGRSENPPASKAAVESMPTIEILESHVDSD-SHCAVCKEAFEIGTEAREMPCKHIYH 243
            N +G    PPASK+A+E++P + I +S+++S+ + CAVC + FE GTEA++MPCKH+YH
Sbjct: 203 PNRYG---TPPASKSAIEALPLVNITKSNLNSEFNQCAVCMDDFEEGTEAKQMPCKHLYH 262

[Close]

BLAST of Carg26581 vs. TrEMBL
Match: tr|A0A0A0KE74|A0A0A0KE74_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G190250 PE=4 SV=1)

HSP 1 Score: 620.2 bits (1598), Expect = 3.2e-174
Identity = 327/379 (86.28%), Postives = 335/379 (88.39%), Query Frame = 0


Query: 1   MASGTASYWCYRCNRFVRAWVQDTISCPYCDGGFVEAIETASSLPAANLHRRFSPSAIHT 60
           M++GTASYWCYRCNRFVRAW QD+I+CPYCDGGFVEAIETASSLP +NLHRR SPSAIHT
Sbjct: 39  MSTGTASYWCYRCNRFVRAWAQDSITCPYCDGGFVEAIETASSLPPSNLHRRLSPSAIHT 98

Query: 61  LDQDPFQSPRLSTRRSRRRLGDRSTFNPVVVLRXXXXXXXXXXXXXXXXXXXXXXDDGAG 120
           LDQD FQSPRLSTRRSRRRLGDRSTFNPVVVLR                      DDGAG
Sbjct: 99  LDQDSFQSPRLSTRRSRRRLGDRSTFNPVVVLR-GSADAGDVVGGGERNSFDIYYDDGAG 158

Query: 121 SGLRPVPATMSEFLMGTGFDRLLEQLAQLEINGFGRSENPPASKAAVESMPTIEILESHV 180
           SGLRPVPATMSEFLMGTGFDRLLEQLAQLEINGFGRSENPPASKAAVESMPTIEILESHV
Sbjct: 159 SGLRPVPATMSEFLMGTGFDRLLEQLAQLEINGFGRSENPPASKAAVESMPTIEILESHV 218

Query: 181 DSDSHCAVCKEAFEIGTEAREMPCKHIYHSDCIIPWLSMRNSCPVCRHELPSERVSPAGG 240
           DSDSHCAVCKEAFEIGTEAREMPCKHIYHS+CIIPWLSMRNSCPVCRHELPSERVSPAGG
Sbjct: 219 DSDSHCAVCKEAFEIGTEAREMPCKHIYHSECIIPWLSMRNSCPVCRHELPSERVSPAGG 278

Query: 241 VSDRVVDEETVGLTIWRLPGGGFAVGRFTGGRLTGERDPPAVYTEMDGGFNANGAPRRVS 300
           VSDRVVDEETVGLTIWRLPGGGFAVGRF+GGRL GERDPPAVYTEMDGGFN NG PRRVS
Sbjct: 279 VSDRVVDEETVGLTIWRLPGGGFAVGRFSGGRLAGERDPPAVYTEMDGGFNGNGVPRRVS 338

Query: 301 WASRRSRGRENRGIGRTFRNIFSFFGRLRSSNSSSSXXXXXXXXXXXXXXXXXXSVFSRY 360
           WASRRSRGRE+RGIGRTFRNIFSFFGR         XXXXXXXXXXXXXXXXXX VFSRY
Sbjct: 339 WASRRSRGRESRGIGRTFRNIFSFFGRFXXXXXXXXXXXXXXXXXXXXXXXXXXXVFSRY 398

Query: 361 LRRPNRTW-LENHTENGRW 379
           LRR NR W LEN  ENGRW
Sbjct: 399 LRRQNRAWVLENQNENGRW 416

[Close]

BLAST of Carg26581 vs. TrEMBL
Match: tr|A0A1S3CKQ2|A0A1S3CKQ2_CUCME (E3 ubiquitin-protein ligase RING1 OS=Cucumis melo OX=3656 GN=LOC103502070 PE=4 SV=1)

HSP 1 Score: 618.6 bits (1594), Expect = 9.2e-174
Identity = 326/379 (86.02%), Postives = 335/379 (88.39%), Query Frame = 0


Query: 1   MASGTASYWCYRCNRFVRAWVQDTISCPYCDGGFVEAIETASSLPAANLHRRFSPSAIHT 60
           M++GTASYWCYRC+RFVRAW QD+I+CPYCDGGFVEAIETASSLPA NLHRR SP+AIHT
Sbjct: 1   MSTGTASYWCYRCSRFVRAWAQDSITCPYCDGGFVEAIETASSLPAPNLHRRLSPTAIHT 60

Query: 61  LDQDPFQSPRLSTRRSRRRLGDRSTFNPVVVLRXXXXXXXXXXXXXXXXXXXXXXDDGAG 120
           +DQD FQSPRLSTRRSRRR GDRSTFNPVVVLR                      DDGAG
Sbjct: 61  VDQDSFQSPRLSTRRSRRRFGDRSTFNPVVVLR-GSADAGDVVGGGERNSFDIYYDDGAG 120

Query: 121 SGLRPVPATMSEFLMGTGFDRLLEQLAQLEINGFGRSENPPASKAAVESMPTIEILESHV 180
           SGLRPVPATMSEFLMGTGFDRLLEQLAQLEINGFGRSENPPASKAAVESMPTIEILESHV
Sbjct: 121 SGLRPVPATMSEFLMGTGFDRLLEQLAQLEINGFGRSENPPASKAAVESMPTIEILESHV 180

Query: 181 DSDSHCAVCKEAFEIGTEAREMPCKHIYHSDCIIPWLSMRNSCPVCRHELPSERVSPAGG 240
           DSDSHCAVCKEAFEIGTEAREMPCKHIYHSDCIIPWLSMRNSCPVCRHELPSERVSPAGG
Sbjct: 181 DSDSHCAVCKEAFEIGTEAREMPCKHIYHSDCIIPWLSMRNSCPVCRHELPSERVSPAGG 240

Query: 241 VSDRVVDEETVGLTIWRLPGGGFAVGRFTGGRLTGERDPPAVYTEMDGGFNANGAPRRVS 300
           VSDRVVDEETVGLTIWRLPGGGFAVGRF+GGRL GERDPPAVYTEMDGGFNANG PRRVS
Sbjct: 241 VSDRVVDEETVGLTIWRLPGGGFAVGRFSGGRLAGERDPPAVYTEMDGGFNANGVPRRVS 300

Query: 301 WASRRSRGRENRGIGRTFRNIFSFFGRLRSSNSSSSXXXXXXXXXXXXXXXXXXSVFSRY 360
           WASRRSRGRE+RGIGRTFRNIFSFFGR         XXXXXXXXXXXXXXXXXX VFSRY
Sbjct: 301 WASRRSRGRESRGIGRTFRNIFSFFGRFXXXXXXXXXXXXXXXXXXXXXXXXXXXVFSRY 360

Query: 361 LRRPNRTW-LENHTENGRW 379
           LRR NR W LEN  ENGRW
Sbjct: 361 LRRQNRAWVLENQNENGRW 378

[Close]

BLAST of Carg26581 vs. TrEMBL
Match: tr|F6GUZ2|F6GUZ2_VITVI (Uncharacterized protein OS=Vitis vinifera OX=29760 GN=VIT_06s0004g05090 PE=4 SV=1)

HSP 1 Score: 454.5 bits (1168), Expect = 2.3e-124
Identity = 253/388 (65.21%), Postives = 291/388 (75.00%), Query Frame = 0


Query: 3   SGTASYWCYRCNRFVRAWVQDTISCPYCDGGFVEAIETASSLPAANLHRRFSPSAIHTLD 62
           + T SYWC+RC RFVR W QD+I CPYC+ GF+E IE      + N HRRF  +A++ L 
Sbjct: 2   ASTTSYWCHRCTRFVRVWAQDSIVCPYCESGFLEEIEATPR--SENHHRRFPATAMYMLG 61

Query: 63  Q---DPFQSPRLSTRRSRRRLGDRSTFNPVVVLRXXXXXXXXXXXXXXXXXXXXXXDDGA 122
               D  QS  L  RRSRR  GDRS FNPV+VLR                      DDGA
Sbjct: 62  NNRPDSEQSANLGLRRSRRNAGDRSPFNPVIVLRGPADGGGGEGGVVERSSFELYYDDGA 121

Query: 123 GSGLRPVPATMSEFLMGTGFDRLLEQLAQLEINGFGRSENPPASKAAVESMPTIEILESH 182
           GSGLRP+PATMSEFLMG+GFDRLLEQL+Q+EINGFGR E+PPASKAAVESMPTIEI+ SH
Sbjct: 122 GSGLRPLPATMSEFLMGSGFDRLLEQLSQIEINGFGRGEHPPASKAAVESMPTIEIVSSH 181

Query: 183 VDSDSHCAVCKEAFEIGTEAREMPCKHIYHSDCIIPWLSMRNSCPVCRHELPSE----RV 242
           + ++ HCAVCKEAF++G+EAREMPCKHIYHSDCI+PWLS+RNSCPVCRHELP++    R 
Sbjct: 182 IVTELHCAVCKEAFQLGSEAREMPCKHIYHSDCILPWLSLRNSCPVCRHELPTDVPGTRN 241

Query: 243 SPAGG---VSDRVVDEETVGLTIWRLPGGGFAVGRFTGGRLTGERDPPAVYTEMDGGFNA 302
           SP  G   +S    +EETVGLTIWRLPGGGFAVGRF+GGR  GER+ P VYTEMDGGFN 
Sbjct: 242 SPVSGNEALSPAPNEEETVGLTIWRLPGGGFAVGRFSGGRRAGERELPVVYTEMDGGFNN 301

Query: 303 NGAPRRVSWASRRSRGRENRG-IGRTFRNIFSFFGRLRSSNSSSSXXXXXXXXXXXXXXX 362
           +GAPRR+SWASRRSR RE+ G +GR FRNIFSF GR R       XXXXXXXXXXXXXXX
Sbjct: 302 SGAPRRISWASRRSRSRESGGSLGRAFRNIFSFLGRFR-XXXXXXXXXXXXXXXXXXXXX 361

Query: 363 XXXSVFSRYLRRPNRTW-LENHTENGRW 379
           XXXSVFSRY+RR +R W LE+ + N RW
Sbjct: 362 XXXSVFSRYVRRRSRAWVLEDQSGNSRW 386

[Close]

BLAST of Carg26581 vs. TrEMBL
Match: tr|A5BC54|A5BC54_VITVI (Uncharacterized protein OS=Vitis vinifera OX=29760 GN=VITISV_022309 PE=4 SV=1)

HSP 1 Score: 447.6 bits (1150), Expect = 2.8e-122
Identity = 249/386 (64.51%), Postives = 287/386 (74.35%), Query Frame = 0


Query: 3   SGTASYWCYRCNRFVRAWVQDTISCPYCDGGFVEAIETASSLPAANLHRRFSPSAIHTLD 62
           + T SYWC+RC RFVR W QD+I CPYC+ GF+E IE      + N HRRF  +A++ L 
Sbjct: 114 ASTTSYWCHRCTRFVRVWAQDSIVCPYCESGFLEEIEATPR--SENHHRRFPATAMYMLG 173

Query: 63  Q---DPFQSPRLSTRRSRRRLGDRSTFNPVVVLRXXXXXXXXXXXXXXXXXXXXXXDDGA 122
               D  QS  L  RRSRR  GDRS FNPV+VLR                      DDGA
Sbjct: 174 NNRPDSEQSANLGLRRSRRNAGDRSPFNPVIVLRGPADGGGGEGGVVERSSFELYYDDGA 233

Query: 123 GSGLRPVPATMSEFLMGTGFDRLLEQLAQLEINGFGRSENPPASKAAVESMPTIEILESH 182
           GSGLRP+PATMSEFLMG+GFDRLLEQL+Q+EINGFGR E+PPASKAAVESMPTIEI+ SH
Sbjct: 234 GSGLRPLPATMSEFLMGSGFDRLLEQLSQIEINGFGRGEHPPASKAAVESMPTIEIVSSH 293

Query: 183 VDSDSHCAVCKEAFEIGTEAREMPCKHIYHSDCIIPWLSMRNSCPVCRHELPSE----RV 242
           + ++ HCAVCKEAF++G+EAREMPCKHIYHSDCI+PWLS+RNSCPVCRHELP++    R 
Sbjct: 294 IVTELHCAVCKEAFQLGSEAREMPCKHIYHSDCILPWLSLRNSCPVCRHELPTDVPGTRN 353

Query: 243 SPAGG---VSDRVVDEETVGLTIWRLPGGGFAVGRFTGGRLTGERDPPAVYTEMDGGFNA 302
           SP  G   +S    +EETVGLTIWRLPGGGFAVGRF+GGR  GER+ P VYTEMDGGFN 
Sbjct: 354 SPVSGTEALSPAPNEEETVGLTIWRLPGGGFAVGRFSGGRRAGERELPVVYTEMDGGFNN 413

Query: 303 NGAPRRVSWASRRSRGRENRG-IGRTFRNIFSFFGRLRSSNSSSSXXXXXXXXXXXXXXX 362
           +GAPRR+SWASRRSR RE+ G +GR FRNIFSF GR R       XXXXXXXXXXXXXXX
Sbjct: 414 SGAPRRISWASRRSRSRESGGSLGRAFRNIFSFLGRFR-XXXXXXXXXXXXXXXXXXXXX 473

Query: 363 XXXSVFSRYLRRPNRTWLENHTENGR 378
           XXX VFSRY+RR +R W    + +GR
Sbjct: 474 XXXXVFSRYVRRRSRAWRTLSSSHGR 496

[Close]

BLAST of Carg26581 vs. TrEMBL
Match: tr|A0A2I4H2Q7|A0A2I4H2Q7_9ROSI (E3 ubiquitin-protein ligase RDUF2-like OS=Juglans regia OX=51240 GN=LOC109013002 PE=4 SV=1)

HSP 1 Score: 445.7 bits (1145), Expect = 1.1e-121
Identity = 251/384 (65.36%), Postives = 286/384 (74.48%), Query Frame = 0


Query: 1   MASGTASYWCYRCNRFVRAWVQD-TISCPYCDGGFVEAIETASSLPAANLHRRFSPSAIH 60
           M+S   SYWCYRC RFVR W QD  I+CP+CDGGF+E I+ A S  + N HRRF+ SA++
Sbjct: 1   MSSPATSYWCYRCTRFVRVWTQDNAITCPHCDGGFIEEIQAAPS--SDNPHRRFAASAMY 60

Query: 61  TL---DQDPFQSPRLSTRRSRRRLGDRSTFNPVVVLRXXXXXXXXXXXXXXXXXXXXXXD 120
                 QD  Q+P L +RRSRR  G RS+FNPV+VLR                      D
Sbjct: 61  LFGNNGQDSDQTPSLGSRRSRRSSGSRSSFNPVIVLR-GGTGDSAGDGDGERNSFELYYD 120

Query: 121 DGAGSGLRPVPATMSEFLMGTGFDRLLEQLAQLEINGFGRSENPPASKAAVESMPTIEIL 180
           DGAGSGLRP+PATMSEFLMG+GFDRLLEQLAQ+E+ GFGR ENPPASKAA+ES+PTIEI 
Sbjct: 121 DGAGSGLRPLPATMSEFLMGSGFDRLLEQLAQIEVTGFGRPENPPASKAAIESLPTIEIA 180

Query: 181 ESHVDSDSHCAVCKEAFEIGTEAREMPCKHIYHSDCIIPWLSMRNSCPVCRHELPSERVS 240
           ++HV S+SHCAVCKEAF++G EAREMPCKHIYHSDCI+PWLS+RNSCPVCRHELPSER  
Sbjct: 181 DNHVGSESHCAVCKEAFDLGAEAREMPCKHIYHSDCILPWLSLRNSCPVCRHELPSERNE 240

Query: 241 PAGGVSDRVVDEETVGLTIWRLPGGGFAVGRFTGG-RLTGERDPPAVYTEMDGGFNANGA 300
                     +EETVGLTIWRLPGGGFAVGRF GG R   ER+ P VYTEMDGGF A+GA
Sbjct: 241 GDNS------EEETVGLTIWRLPGGGFAVGRFAGGRRAAAERELPVVYTEMDGGFGASGA 300

Query: 301 PRRVSWASRRSRGRENRGIGRTFRNIFSFFGRLRSSNSSSSXXXXXXXXXXXXXXXXXXS 360
           PRRVSW SRRSRGRE+ G  R FRN FSF   LR   +   XXXXXXXXXXXXXXXXXX 
Sbjct: 301 PRRVSWVSRRSRGRESGGFRRAFRNFFSF---LRFRPNXXXXXXXXXXXXXXXXXXXXXX 360

Query: 361 VFSRYLRRPNRTW-LENHTENGRW 379
           VFSRY+RR +  W LE+ + NGRW
Sbjct: 361 VFSRYVRRRSSAWVLEDQSRNGRW 372

The following BLAST results are available for this feature:

BLAST of Carg26581 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022947282.1	2.7e-193	100.00	E3 ubiquitin-protein ligase RDUF2-like [Cucurbita moschata]	[more]
XP_023532253.1	7.8e-193	99.47	E3 ubiquitin-protein ligase RDUF2-like [Cucurbita pepo subsp. pepo]	[more]
XP_023007108.1	5.1e-192	99.47	E3 ubiquitin-protein ligase RDUF2-like [Cucurbita maxima]	[more]
XP_004143127.1	4.8e-174	86.28	PREDICTED: E3 ubiquitin-protein ligase RING1 [Cucumis sativus]	[more]
KGN47134.1	4.8e-174	86.28	hypothetical protein Csa_6G190250 [Cucumis sativus]	[more]

BLAST of Carg26581 vs. TAIR10


Match Name	E-value	Identity	Description
AT3G46620.1	4.1e-71	46.09	zinc finger (C3HC4-type RING finger) family protein	[more]
AT5G59550.1	3.5e-70	46.60	zinc finger (C3HC4-type RING finger) family protein	[more]
AT2G39720.1	1.7e-69	44.61	RING-H2 finger C2A	[more]
AT2G40830.2	8.2e-35	35.68	RING-H2 finger C1A	[more]
AT3G56580.2	1.4e-34	35.39	RING/U-box superfamily protein	[more]

BLAST of Carg26581 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|Q9SNB6\|RDUF1_ARATH	7.5e-70	46.09	E3 ubiquitin-protein ligase RDUF1 OS=Arabidopsis thaliana OX=3702 GN=RDUF1 PE=1 ...	[more]
sp\|Q940T5\|RDUF2_ARATH	6.3e-69	46.60	E3 ubiquitin-protein ligase RDUF2 OS=Arabidopsis thaliana OX=3702 GN=DURF2 PE=1 ...	[more]
sp\|O22283\|RHC2A_ARATH	3.1e-68	44.61	Probable E3 ubiquitin-protein ligase RHC2A OS=Arabidopsis thaliana OX=3702 GN=RH...	[more]
sp\|O22197\|RHC1A_ARATH	1.5e-33	35.68	Probable E3 ubiquitin-protein ligase RHC1A OS=Arabidopsis thaliana OX=3702 GN=RH...	[more]
sp\|P0CH30\|RING1_GOSHI	1.9e-33	33.69	E3 ubiquitin-protein ligase RING1 OS=Gossypium hirsutum OX=3635 GN=RING1 PE=1 SV...	[more]

BLAST of Carg26581 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A0A0KE74\|A0A0A0KE74_CUCSA	3.2e-174	86.28	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G190250 PE=4 SV=1	[more]
tr\|A0A1S3CKQ2\|A0A1S3CKQ2_CUCME	9.2e-174	86.02	E3 ubiquitin-protein ligase RING1 OS=Cucumis melo OX=3656 GN=LOC103502070 PE=4 S...	[more]
tr\|F6GUZ2\|F6GUZ2_VITVI	2.3e-124	65.21	Uncharacterized protein OS=Vitis vinifera OX=29760 GN=VIT_06s0004g05090 PE=4 SV=...	[more]
tr\|A5BC54\|A5BC54_VITVI	2.8e-122	64.51	Uncharacterized protein OS=Vitis vinifera OX=29760 GN=VITISV_022309 PE=4 SV=1	[more]
tr\|A0A2I4H2Q7\|A0A2I4H2Q7_9ROSI	1.1e-121	65.36	E3 ubiquitin-protein ligase RDUF2-like OS=Juglans regia OX=51240 GN=LOC109013002...	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR010543	DUF1117
IPR013083	Znf_RING/FYVE/PHD
IPR001841	Znf_RING

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg26581-RA	Carg26581-RA	mRNA

InterPro

Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001841	Zinc finger, RING-type	SMART	SM00184	ring_2	coord: 186..226 e-value: 3.0E-7 score: 40.1
IPR001841	Zinc finger, RING-type	PFAM	PF13639	zf-RING_2	coord: 185..227 e-value: 3.9E-11 score: 43.0
IPR001841	Zinc finger, RING-type	PROSITE	PS50089	ZF_RING_2	coord: 186..227 score: 12.135
None	No IPR available	PFAM	PF14369	zinc_ribbon_9	coord: 7..38 e-value: 4.4E-14 score: 52.3
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 330..349
None	No IPR available	PANTHER	PTHR44274	FAMILY NOT NAMED	coord: 2..373
None	No IPR available	PANTHER	PTHR44274:SF3	E3 UBIQUITIN-PROTEIN LIGASE RDUF1-RELATED	coord: 2..373
None	No IPR available	CDD	cd16667	RING-H2_RNF126_like	coord: 186..227 e-value: 5.89553E-24 score: 91.9956
None	No IPR available	SUPERFAMILY	SSF57850	RING/U-box	coord: 166..232
IPR013083	Zinc finger, RING/FYVE/PHD-type	GENE3D	G3DSA:3.30.40.10		coord: 152..233 e-value: 5.2E-20 score: 72.9
IPR010543	Domain of unknown function DUF1117	PFAM	PF06547	DUF1117	coord: 251..362 e-value: 6.6E-41 score: 139.3

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Carg26581	Cla013320	Watermelon (97103) v1	carwmB0916
Carg26581	Csa6G190250	Cucumber (Chinese Long) v2	carcuB0930
Carg26581	CSPI06G14310	Wild cucumber (PI 183967)	carcpiB0953
Carg26581	Cucsa.138820	Cucumber (Gy14) v1	carcgyB1033
Carg26581	CmaCh20G003890	Cucurbita maxima (Rimu)	carcmaB1256
Carg26581	CmaCh02G007890	Cucurbita maxima (Rimu)	carcmaB1257
Carg26581	CmoCh02G007890	Cucurbita moschata (Rifu)	carcmoB1226
Carg26581	CmoCh20G004220	Cucurbita moschata (Rifu)	carcmoB1225
Carg26581	Lsi10G013920	Bottle gourd (USVL1VR-Ls)	carlsiB832
Carg26581	Cp4.1LG05g09400	Cucurbita pepo (Zucchini)	carcpeB1265
Carg26581	Cp4.1LG16g06240	Cucurbita pepo (Zucchini)	carcpeB1264
Carg26581	CsGy6G014160	Cucumber (Gy14) v2	carcgybB0903
Carg26581	CsaV3_6G016680	Cucumber (Chinese Long) v3	carcucB0953
Carg26581	Cla97C02G045990	Watermelon (97103) v2	carwmbB0960
Carg26581	Bhi10G000586	Wax gourd	carwgoB1058

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
Carg26581	Carg03329	Silver-seed gourd	carcarB365

The following block(s) are covering this gene:


Gene	Organism	Block
Carg26581	Melon (DHL92) v3.5.1	carmeB0901
Carg26581	Melon (DHL92) v3.6.1	carmedB0909
Carg26581	Watermelon (Charleston Gray)	carwcgB0894