Carg26502 (gene) Silver-seed gourd | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Carg26502
Type	gene
Organism	Cucurbita argyrosperma (Silver-seed gourd)
Description	NAC domain-containing protein
Location	Cucurbita_argyrosperma_scaffold_255 : 43601 .. 49011 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCGGCTGCTGCTGAGAACGGCGTTTCCAAGGAACTGCAGCTTTCAATGGCGGTTTCGTCTATGTTTCCTGGTTTTCGCTTTTCGCCGACCGATGAGGAGTTGATTTCGTTTTATCTCAAGAAGAAATTGGATGGCTACGAGAAGAGCGTTGAAATCATCGCGGAGGTCGAAATTTACAAGTACGAACCCTGGGACTTACCTGGTCAGTGTTGCTTTTTTCAATGGTCTCTGATTCTTAGAGCCCTAGGCGAAAACCCTACATCGATTCTATTATGCTCATTGGCGGCTATTTCGATTGTTCTTGATTCATGCTTTCCAATTTGGTTGGGCTTTTTCTGGTGTTTGATTAGGGGATGTTTTTCTTTTTTCTTTCTTCATGTAATCAGCCAAGTCTATAATTCAATCAGATAATGAATGGTTCTTCTTCTCCCCTCGTGGAAAGAAGTACCCAAATGGTAATCAGACCAGGAGAGCCACTGATTTAGGCTATTTCGATTGTTCTTGATTCATGCTTTCCAATTTGGTTGGGCTTTTTTCTGTAATCAGTGTGGTTTGATTAGGGGATGTTTTTCTTTTTTCTTTCTTCATGTAATCAGCCAAGTCTATAATTCAATCAGATAATGAATGGTTCTTCTTCTCCCCTCGTGGAAAGAAGTACCCAAATGGTAATCAGACCAGGAGAGCCACTGATTTAGGCTTTTCGATTGTTCTTGATCATGCTTTCCAATTTGGTTGGGCTTTTTCTGGTGTTTGATTAGGGGATGTTTTTCTTTTCTCTTCTTCATGTAATCAGCCAAGTCTATAATTCAATCAGATAATGAATGGTTTCTTCTTCTCCCCTCGTGGAAAGAAGTACCCAAATGGTAATCAGACCAGGAGAGCCACTGATTTAGGCTTTTCGATTGTTCTTTTGATTCATGCTTTTCCAATTTGGTTGGGCTTTTTCTGGTGTTTGATTAGGGGATGTTTTTCTTTTTTCTTTCTTCATGTAATCAGCCAAGTCTATAATTCAATCAGATAATGAATGGTTCTTCTTCTCCCCTCGTGGAAAGAAGTACCCAAATGGTAATCAGACCAGGAGAGCCACTGATTTAGGCTATTTCGATTGTTCTTGATTCATGCTTTCCAATTTGGTTGGGCTTTTTCTGGTGTTTGATTAGGGGATGTTTTTCTTTTTTCTTTCTTCATGTAATCAGCCAAGTCTATAATTCAATCAGATAATGAATGGTTCTTCTTCTCCCCTCGTGGAAAGAAGTACCCAAATGGTAATCAGACCAGGAGAGCCACTGATTTAGGCTATTTCGATTGTTCTTGATTCATGCTTTCCAATTTGGTTGGGCTTTTTCTGGTGTTTGATTAGGGGATGTTTTTCTTTTTTCTTTCTTCATGTAATCAGCCAAGTCTATAATTCAATCAGATAATGAATGGTTCTTCTCTTCTCCCCTCGTGGAAAGAAGGTACCCAGGAGAGCCACTGATTTAGGCTATTTCGATTGTTCTTGATTCATGCTTCCAATTTGGTTGGGCATTAGGGGATGTTTTTCTTTTTTCTTTCTTCATGTAATCAGCCACTATATATTCAATCAGATAATGATGATATGGTTTCTTCTTCTCCCCTCGTGGAAAGAAGTACAGGAGGAGAGCCACTGATTTAGGCTATTTCGATTGTTCTTGATTCATGCTTTCCAATTTGGTTGGGCTTTTTTCTGGTGTTTGATTAGGGGATGTTTTTCTTTTTTCTTTCTTCATGTAATCAGCCCAAGTCTATAATTCAATCAGATAATGAATGGTTCTTCTTCTCCCCTCGTGGAAAAGAAGTACCCAAAATGGTAATCAGACCAGGAGAGCCACTGATTTAGGCTATTTCGATTGTTCTTGATTCATGCTTTCCAATTTTGGTTGGGCTTTTTCTGGTGTTTGATTAGGGGATGTTTTTCTTTTTTTCTTTCTTCATGTAATCAGCCAAGTCTATAATTCAATCAGATAATGAATGGTTCTTCTTCTTCCCTCGTGGAAAGAAGTACCCAAATGGTAAATCAGACCAGGAGAGCCACTGATTTAGGCTATTTCGATTGTCTTGATTCATGCTTTCCAATTTGGTTGGGCTTTTTCTGGTGTTTGATTAGGGATGTTTTTCTTTTTTCTTTCTTCATGTAACAGCCAAGTCTATAATTCAATCAGATAATGAATGGTTCTTCTTCTCCCCTCGTGGAAAGAAGTACCCAAATGGTAATCAGACCAGGAGAGCCACTGATTTAGGCTATTTCGATTGTTCTTGATTCATGCTTTCCAATTTGGTTGGGCTTTTTCTGGTGTTTGATTAGGGGATGTTTTTCTTTTTTCTTTCTTCATGTAATCAGCCAAGTCTATAATTCAATCAGATAATGAATGGTTCTTCTTCTCCCCTCGTGGAAAGAAGTACCCAAATGGTAATCAGACCAGGAGAGCCACTGATTTAGGCTATTTCGATTGTTCTTGATTCATGCTTTCCAATTTGGTTGGGCTTTTTCTGGTGTTTGATTAGGGGATGTTTTTCTTTTTTCTTTCTTCATGTAATCAGCCAAGTCTATAATTCAATCAGATAATGAATGGTTCTTCTTCTCCCCTCGTGGAAAGAAGTACCCAAATGGTAATCAGACCAGGAGAGCCACTGATTTAGGCTATTTCGATTGTTCTTGATTCATGCTTTCCAATTTGGTTGGGCTTTTTCTGGTGTTTGATTAGGGGATGTTTTTTCTTTTTTTCTTTCTTCATGTAATCAGCCAAGTCTATAATTCAATCAGATAATGAATGGTTCTTCTTCTCCCCTCGTGGAAAGAAGTACCCAAATGGTAATCAGACCAGGAGAGCCACTGATTTAGGCTATTTCGATTGTTCTTGATTCATGGCTTTCCAATTTGGTTGGGCTTTTTTCTGGTGTTTGATTAGGGGATTGTTTTTTCTTTTTTTCTTTCTTCATGTAATCAGCCAGTCTATAATGCAACAGATAATGAATGGTTCTTCTTCTCCCCTCGTGGAAAGAAAGTACCCAAATGGTAATCAGACCAGGAGAGCCACTATTTTAGGCTATTGGATTGTTCTTGAGGGAATGCTTTTCCAATTGGGTTAAGCTAGTTCTGGTGTTATTAACCAAGAGACTCTTGTTTTCTTTTTTCTGGGCTTATGTACCCAGCCAAAGAACAGAGGATTAATTCAATCAGATAACAAAAAGGTTAAAGCTCTCCCCTCGTGGAAAGATAATTACCCAAAAAATGGAAATCTTTCCTTCAAATGTAGTCACGGATATAATGTCACAAAGGAGCTAGGAGTTGATTCTTTCAATAACTTTTCTTATTGGTCTTACTTAGAAGAATGTTTGTTCCAATTCTAGCACCTTGCAAGTACATTATGCATTCTGAGTTTAGACAAAAAAGTATGAGATCCCACGTCGGTTGGGGAGGAGAACGAAACATTCTTTATAAGAGTGTGGAAACCTCTCTATAGCAGACGCGTTTTAAAAACTTTGAGGGGAAGTCCGAAAGGGTTGCTCAAAGAGTACAATATCGGCTAGCGGTGGGCTTAGGCCATTAGAAATGGTATTAGAGTCAGATACCGAGCGGTGTACCAGCAAGGACGCTAGGTCCCAAGGGGGTGGATTGTGAGATCCCACATTGGTTGGAGAGGGGAAGGAAGCCTTCCTTGTGGAAACCTTTGCCTAGTGGACACATTTTAAAACCTTGGGGGAAGTCCGGAAGAGGAAGCCTAAAACGGACAATATCTGCTAGCAGTCAACTTATGGGCTGTGAAATGTATAAGTTCATTGTAATAGAAGTCAGACACTGTATCCTATACATTTGTACGTGTTAGATAGGTGAATCATTAGATAAGTAGAAACTCTCACAACAGTCTACTGAGCATTGTATATGCATCTTATTATTTTAAATCCTAAAGCAGACTGTGGATATAAATATAGTGGACATAAAAATCTTGAGAGAGTAATCGATCAAATGTATTAACGCGTACCTTACAATCGCTAATATCCTGCCTAGCGGTAGAGAACTTGTGCTGTCCTTGCAAAAATATATCACATGTAATAAGCTTAGACATTCAAACCATGGATCTAACCAGCATGTGACGAACTATGGACTCAGCCAAAGGGGGAGTATGAATTGTATAGAAGTCCCACAGTACGTATTGGAGAGGAGAGAAGCGATAGCCATTCCATGTAAGGGTGTGAAACCTCTCGCCGACTCTGGAACGACGTTTTTAAAACTTTGAGAGAGACAGGTCGCGTAAGGGAAAAATCCACACAGAGAGGACAAGTATCTTAGTTAGCAGTGGCTTGGTGCTGTTACAAAATTGACAAACTATCATAGCTGTTACAAAATTGACAAACTATCTTTTGTATGATGCAGGATTTTCTAGTTGTTTGCCGCCTCAGGAGGAATAATGAATTTCGTCAACATAGTAGCTCAAACCGAGCTTCTTGTAGTCAAATGAATCTATCCTCTTTGCAAGCTCATTCTGGCGAGCAGGTTGATTCTACATCTGAATCCAATCAAAAAGATGCTGCAGAAGCTGCACTTGTGGAATGCTCTGATGGGCAGAAGGTAAATTCTAACATCCTGTCACCAGTAGTCTTGTTCTTCGTACTACAGTTGTGCAATGGATCTGCTAATGTCTAGGCACTCCTCTTACTAATCTTGTGAAGGAAACTATTGACTAGAGATTCATTCCCAAGTTTCATTTCATCCCAGAAATGAGGCAAGGGGACTCTATTAGACTTTCATTTCATCCCAGAAATGAGGCAAGGGGACTCTATTAGACTTTCATTTCATCACATATACTCTCAAAGCTATATATTTAGTTGGACCTAGTTTAGACATTCAGCTAGTTAAATGCCTAAGTAGATTAGTGAAACATGGGATTCTCGAGAGAAAAAGAACACCCAACACGTTGATTAGTAAAGTCCCGCTTTCTCGCATCCAGGATTACGGTTCTGATGATTTCTACTCCGACATACTAAAAGATGACATTATAAACCTCGACACGGCACCTAACGATGCTGCTTCAGATCTGATGCCACTGGATTTCCATAGATCAGACACAGCGCGAGAATCCCAGACTGAGGCGAACGACGGATTGGAATGGCTACCAAGCCAAGGGTTTGCAAATAGGAGAATCAGATTGAAAAGGAGAGAAGCCACTAAAGCAATGAAGTTGGACGCTGTGAAAATTGGTGGTTCCAGATATAAGGTTGAGAAAGTAAGGTTTTCTTCCTTAAAACTATGGCGAAGCAGGTTGATGAACACTGCCTCTTCTATTAGCATTTTTGGTTGCTACGTTCGAGTTGTGATATTTTTTTTGTTGATTTTGTTAGCTTTGTTTATGTCTCGATTAGAGGTCTTTGGTATGCCCAAAGGGCTCTAG

mRNA sequence

ATGGCGGCTGCTGCTGAGAACGGCGTTTCCAAGGAACTGCAGCTTTCAATGGCGGTTTCGTCTATGTTTCCTGGTTTTCGCTTTTCGCCGACCGATGAGGAGTTGATTTCGTTTTATCTCAAGAAGAAATTGGATGGCTACGAGAAGAGCGTTGAAATCATCGCGGAGGTCGAAATTTACAAGTACGAACCCTGGGACTTACCTGGTCACTCAAACCGAGCTTCTTGTAGTCAAATGAATCTATCCTCTTTGCAAGCTCATTCTGGCGAGCAGGTTGATTCTACATCTGAATCCAATCAAAAAGATGCTGCAGAAGCTGCACTTGTGGAATGCTCTGATGGGCAGAAGGATTACGGTTCTGATGATTTCTACTCCGACATACTAAAAGATGACATTATAAACCTCGACACGGCACCTAACGATGCTGCTTCAGATCTGATGCCACTGGATTTCCATAGATCAGACACAGCGCGAGAATCCCAGACTGAGGCGAACGACGGATTGGAATGGCTACCAAGCCAAGGGTTTGCAAATAGGAGAATCAGATTGAAAAGGAGAGAAGCCACTAAAGCAATGAAGTTGGACGCTGTGAAAATTGGTGGTTCCAGATATAAGGTTGAGAAAGTAAGGTTTTCTTCCTTAAAACTATGGCGAAGCAGGTTGATGAACACTGCCTCTTCTATTAGCATTTTTGGTTGCTACGTTCGAGTTGTGATATTTTTTTTGTTGATTTTGTTAGCTTTGTTTATGTCTCGATTAGAGGTCTTTGGTATGCCCAAAGGGCTCTAG

Coding sequence (CDS)

ATGGCGGCTGCTGCTGAGAACGGCGTTTCCAAGGAACTGCAGCTTTCAATGGCGGTTTCGTCTATGTTTCCTGGTTTTCGCTTTTCGCCGACCGATGAGGAGTTGATTTCGTTTTATCTCAAGAAGAAATTGGATGGCTACGAGAAGAGCGTTGAAATCATCGCGGAGGTCGAAATTTACAAGTACGAACCCTGGGACTTACCTGGTCACTCAAACCGAGCTTCTTGTAGTCAAATGAATCTATCCTCTTTGCAAGCTCATTCTGGCGAGCAGGTTGATTCTACATCTGAATCCAATCAAAAAGATGCTGCAGAAGCTGCACTTGTGGAATGCTCTGATGGGCAGAAGGATTACGGTTCTGATGATTTCTACTCCGACATACTAAAAGATGACATTATAAACCTCGACACGGCACCTAACGATGCTGCTTCAGATCTGATGCCACTGGATTTCCATAGATCAGACACAGCGCGAGAATCCCAGACTGAGGCGAACGACGGATTGGAATGGCTACCAAGCCAAGGGTTTGCAAATAGGAGAATCAGATTGAAAAGGAGAGAAGCCACTAAAGCAATGAAGTTGGACGCTGTGAAAATTGGTGGTTCCAGATATAAGGTTGAGAAAGTAAGGTTTTCTTCCTTAAAACTATGGCGAAGCAGGTTGATGAACACTGCCTCTTCTATTAGCATTTTTGGTTGCTACGTTCGAGTTGTGATATTTTTTTTGTTGATTTTGTTAGCTTTGTTTATGTCTCGATTAGAGGTCTTTGGTATGCCCAAAGGGCTCTAG

Protein sequence

MAAAAENGVSKELQLSMAVSSMFPGFRFSPTDEELISFYLKKKLDGYEKSVEIIAEVEIYKYEPWDLPGHSNRASCSQMNLSSLQAHSGEQVDSTSESNQKDAAEAALVECSDGQKDYGSDDFYSDILKDDIINLDTAPNDAASDLMPLDFHRSDTARESQTEANDGLEWLPSQGFANRRIRLKRREATKAMKLDAVKIGGSRYKVEKVRFSSLKLWRSRLMNTASSISIFGCYVRVVIFFLLILLALFMSRLEVFGMPKGL

Homology

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BLAST of Carg26502 vs. NCBI nr
Match: XP_022927558.1 (NAC domain-containing protein 40-like isoform X2 [Cucurbita moschata])

HSP 1 Score: 391.7 bits (1005), Expect = 1.9e-105
Identity = 254/358 (70.95%), Postives = 257/358 (71.79%), Query Frame = 0


Query: 1   MAAAAENGVSKELQLSMAVSSMFPGFRFSPTDEELISFYLKKKLDGYEKSVEIIAEVEIY 60
           MAA AENGVSKELQLSMAVSSMFPGFRFSPTDEELISFYLKKKLDGYEKSVEIIAEVEIY
Sbjct: 1   MAAVAENGVSKELQLSMAVSSMFPGFRFSPTDEELISFYLKKKLDGYEKSVEIIAEVEIY 60

Query: 61  KYEPWDLPGH-------------------------------------------------- 120
           KYEPWDLP +                                                  
Sbjct: 61  KYEPWDLPDNEWFFFSPRGKKYPNGNQTRRATDLGYWKATGKERNVKSGSNVIGTKRTLV 120

Query: 121 ---------------------------------------------SNRASCSQMNLSSLQ 180
                                                        SNRASCS+MNLSSLQ
Sbjct: 121 FHTGRAPKGERTEWIMHEYNNKDKAQDFLVVCRLRRNNEFRQHSSSNRASCSKMNLSSLQ 180

Query: 181 AHSGEQVDSTSESNQKDAAEAALVECSDGQKDYXXXXXXXXXXXXXXXXXXXXXXXAASD 240
           AHSGEQVDSTSESNQKD AEAALVECSDGQKDYXXXXXXXXXXXXXXXXXXXXX  AASD
Sbjct: 181 AHSGEQVDSTSESNQKDVAEAALVECSDGQKDYXXXXXXXXXXXXXXXXXXXXXYDAASD 240

Query: 241 LMPLDFHRSDTARESQTEANDGLEWLPSQGFANRRIRLKRREATKAMKLDAVKIGGSRYK 263
           LMPLDFHRSDTARESQTEANDGLEWLPSQGFANRRIRLKRREATKAMKLDAVKIGGSRYK
Sbjct: 241 LMPLDFHRSDTARESQTEANDGLEWLPSQGFANRRIRLKRREATKAMKLDAVKIGGSRYK 300

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BLAST of Carg26502 vs. NCBI nr
Match: XP_022927557.1 (NAC domain-containing protein 40-like isoform X1 [Cucurbita moschata])

HSP 1 Score: 388.7 bits (997), Expect = 1.6e-104
Identity = 254/365 (69.59%), Postives = 256/365 (70.14%), Query Frame = 0


Query: 1   MAAAAENGVSKELQLSMAVSSMFPGFRFSPTDEELISFYLKKKLDGYEKSVEIIAEVEIY 60
           MAA AENGVSKELQLSMAVSSMFPGFRFSPTDEELISFYLKKKLDGYEKSVEIIAEVEIY
Sbjct: 1   MAAVAENGVSKELQLSMAVSSMFPGFRFSPTDEELISFYLKKKLDGYEKSVEIIAEVEIY 60

Query: 61  KYEPWDLP---------------------------------------------------- 120
           KYEPWDLP                                                    
Sbjct: 61  KYEPWDLPAKSIIQSDNEWFFFSPRGKKYPNGNQTRRATDLGYWKATGKERNVKSGSNVI 120

Query: 121 --------------------------------------------------GHSNRASCSQ 180
                                                               SNRASCS+
Sbjct: 121 GTKRTLVFHTGRAPKGERTEWIMHEYNNKDKAQDFLVVCRLRRNNEFRQHSSSNRASCSK 180

Query: 181 MNLSSLQAHSGEQVDSTSESNQKDAAEAALVECSDGQKDYXXXXXXXXXXXXXXXXXXXX 240
           MNLSSLQAHSGEQVDSTSESNQKD AEAALVECSDGQKDYXXXXXXXXXXXXXXXXXXXX
Sbjct: 181 MNLSSLQAHSGEQVDSTSESNQKDVAEAALVECSDGQKDYXXXXXXXXXXXXXXXXXXXX 240

Query: 241 XXXAASDLMPLDFHRSDTARESQTEANDGLEWLPSQGFANRRIRLKRREATKAMKLDAVK 263
           X  AASDLMPLDFHRSDTARESQTEANDGLEWLPSQGFANRRIRLKRREATKAMKLDAVK
Sbjct: 241 XYDAASDLMPLDFHRSDTARESQTEANDGLEWLPSQGFANRRIRLKRREATKAMKLDAVK 300

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BLAST of Carg26502 vs. NCBI nr
Match: XP_022973142.1 (NAC domain-containing protein 40-like isoform X2 [Cucurbita maxima])

HSP 1 Score: 388.3 bits (996), Expect = 2.1e-104
Identity = 241/357 (67.51%), Postives = 246/357 (68.91%), Query Frame = 0


Query: 1   MAAAAENGVSKELQLSMAVSSMFPGFRFSPTDEELISFYLKKKLDGYEKSVEIIAEVEIY 60
           MAAA+ENGVSKELQLSMAVSSMFPGFRFSPTDEELISFYLKKKLDGYEKSVEIIAEVEIY
Sbjct: 1   MAAASENGVSKELQLSMAVSSMFPGFRFSPTDEELISFYLKKKLDGYEKSVEIIAEVEIY 60

Query: 61  KYEPWDLPGH-------------------------------------------------- 120
           KYEPWDLP +                                                  
Sbjct: 61  KYEPWDLPDNEWFFFSPRGKKYPNGNQTRRATDLGYWKATGKERNVKSGSNVIGTKRTLV 120

Query: 121 --------------------------------------------SNRASCSQMNLSSLQA 180
                                                       SNRASCSQMNLSSLQA
Sbjct: 121 FHTGRAPKGERTEWIMHEYNKDKAQDFLVVCRLRRNNEFRQHSSSNRASCSQMNLSSLQA 180

Query: 181 HSGEQVDSTSESNQKDAAEAALVECSDGQKDYXXXXXXXXXXXXXXXXXXXXXXXAASDL 240
           HSGEQVDSTSESNQKDAAEAALVECSDGQKDY   XXXXXXXXXXX         AASDL
Sbjct: 181 HSGEQVDSTSESNQKDAAEAALVECSDGQKDYGSDXXXXXXXXXXXINLDTAPYNAASDL 240

Query: 241 MPLDFHRSDTARESQTEANDGLEWLPSQGFANRRIRLKRREATKAMKLDAVKIGGSRYKV 263
           MPLDFHRSDT RESQTEANDGLEWLPSQGFANRRIRLKRREATKA KLDAVKIGGSRYKV
Sbjct: 241 MPLDFHRSDTTRESQTEANDGLEWLPSQGFANRRIRLKRREATKAKKLDAVKIGGSRYKV 300

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BLAST of Carg26502 vs. NCBI nr
Match: XP_022973141.1 (NAC domain-containing protein 89-like isoform X1 [Cucurbita maxima])

HSP 1 Score: 385.2 bits (988), Expect = 1.8e-103
Identity = 241/364 (66.21%), Postives = 245/364 (67.31%), Query Frame = 0


Query: 1   MAAAAENGVSKELQLSMAVSSMFPGFRFSPTDEELISFYLKKKLDGYEKSVEIIAEVEIY 60
           MAAA+ENGVSKELQLSMAVSSMFPGFRFSPTDEELISFYLKKKLDGYEKSVEIIAEVEIY
Sbjct: 1   MAAASENGVSKELQLSMAVSSMFPGFRFSPTDEELISFYLKKKLDGYEKSVEIIAEVEIY 60

Query: 61  KYEPWDLP---------------------------------------------------- 120
           KYEPWDLP                                                    
Sbjct: 61  KYEPWDLPAKSIIQSDNEWFFFSPRGKKYPNGNQTRRATDLGYWKATGKERNVKSGSNVI 120

Query: 121 -------------------------------------------------GHSNRASCSQM 180
                                                              SNRASCSQM
Sbjct: 121 GTKRTLVFHTGRAPKGERTEWIMHEYNKDKAQDFLVVCRLRRNNEFRQHSSSNRASCSQM 180

Query: 181 NLSSLQAHSGEQVDSTSESNQKDAAEAALVECSDGQKDYXXXXXXXXXXXXXXXXXXXXX 240
           NLSSLQAHSGEQVDSTSESNQKDAAEAALVECSDGQKDY   XXXXXXXXXXX       
Sbjct: 181 NLSSLQAHSGEQVDSTSESNQKDAAEAALVECSDGQKDYGSDXXXXXXXXXXXINLDTAP 240

Query: 241 XXAASDLMPLDFHRSDTARESQTEANDGLEWLPSQGFANRRIRLKRREATKAMKLDAVKI 263
             AASDLMPLDFHRSDT RESQTEANDGLEWLPSQGFANRRIRLKRREATKA KLDAVKI
Sbjct: 241 YNAASDLMPLDFHRSDTTRESQTEANDGLEWLPSQGFANRRIRLKRREATKAKKLDAVKI 300

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BLAST of Carg26502 vs. NCBI nr
Match: XP_023520689.1 (LOW QUALITY PROTEIN: NAC domain-containing protein 89-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 365.9 bits (938), Expect = 1.1e-97
Identity = 241/366 (65.85%), Postives = 244/366 (66.67%), Query Frame = 0


Query: 1   MAAAAENGVSKELQLSMAVSSMFPGFRFSPTDEELISFYLKKKLDGYEKSVEIIAEVEIY 60
           MAAAAENGVSKELQLSM VSSMFPGFRFSPTDEELISFYLK KLDGYEKSVEIIAEVEIY
Sbjct: 1   MAAAAENGVSKELQLSMTVSSMFPGFRFSPTDEELISFYLKNKLDGYEKSVEIIAEVEIY 60

Query: 61  KYEPWDLP---------------------------------------------------- 120
           KYEPWDLP                                                    
Sbjct: 61  KYEPWDLPAKSIIQSDNEWFFFSPRGKKYPNGNQTRRATDLGYWKATGKERNVKSGSNVI 120

Query: 121 --------------------------------------------------GHSNRASCSQ 180
                                                               SNRASCSQ
Sbjct: 121 GTKRTLVFHTGRAPKGERTEWIMHEYNNKDKAQDFLVVCRLRRNNEFRQHSSSNRASCSQ 180

Query: 181 MNLSSLQAHSGEQVDSTSESNQKDAAEAA-LVECSDGQKDYXXXXXXXXXXXXXXXXXXX 240
           MNLSSLQAHSGE+VDSTSESNQKDAAE   L   SDGQKDY  XXXXXXXXXXXXXXXX 
Sbjct: 181 MNLSSLQAHSGERVDSTSESNQKDAAEXLHLWNSSDGQKDYGSXXXXXXXXXXXXXXXXT 240

Query: 241 XXXXAASDLMPLDFHRSDTARESQTEANDGLEWLPSQGFANRRIRLKRREATKAMKLDAV 263
               AASDLMPLDFHRSDTARESQTEANDGLEWLPSQGFANRRIRLKRREATKAMKLDAV
Sbjct: 241 APYDAASDLMPLDFHRSDTARESQTEANDGLEWLPSQGFANRRIRLKRREATKAMKLDAV 300

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BLAST of Carg26502 vs. TAIR10
Match: AT2G27300.1 (NTM1-like 8)

HSP 1 Score: 98.6 bits (244), Expect = 6.1e-21
Identity = 45/67 (67.16%), Postives = 57/67 (85.07%), Query Frame = 0


Query: 9  VSKELQLSMAVSSMFPGFRFSPTDEELISFYLKKKLDGYEKSVEIIAEVEIYKYEPWDLP 68
          +SKE ++S+AVS++FPGFRFSPTD ELIS+YL++K+DG E SV +IAEVEIYK+EPWDLP
Sbjct: 1  MSKEAEMSIAVSALFPGFRFSPTDVELISYYLRRKIDGDENSVAVIAEVEIYKFEPWDLP 60

Query: 69 GHSNRAS 76
            S   S
Sbjct: 61 EESKLKS 67

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BLAST of Carg26502 vs. TAIR10
Match: AT5G22290.1 (NAC domain containing protein 89)

HSP 1 Score: 93.6 bits (231), Expect = 2.0e-19
Identity = 41/64 (64.06%), Postives = 53/64 (82.81%), Query Frame = 0


Query: 8  GVSKELQLSMAVSSMFPGFRFSPTDEELISFYLKKKLDGYEKSVEIIAEVEIYKYEPWDL 67
          GVSK+   SM  S++FPGF+FSPTD ELIS+YLK+K+DG E+SVE+I ++EIY +EPWDL
Sbjct: 7  GVSKDTAASMEASTVFPGFKFSPTDVELISYYLKRKMDGLERSVEVIPDLEIYNFEPWDL 66

Query: 68 PGHS 72
          P  S
Sbjct: 67 PDKS 70

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BLAST of Carg26502 vs. TAIR10
Match: AT3G44290.1 (NAC domain containing protein 60)

HSP 1 Score: 87.0 bits (214), Expect = 1.8e-17
Identity = 39/54 (72.22%), Postives = 47/54 (87.04%), Query Frame = 0


Query: 18 AVSSMFPGFRFSPTDEELISFYLKKKLDGYEKSVEIIAEVEIYKYEPWDLPGHS 72
          AV++ FPGF+FSPTD ELIS+YLK+K+DG E+SVEII EVEIY +EPWDLP  S
Sbjct: 10 AVTTTFPGFKFSPTDIELISYYLKRKMDGLERSVEIIPEVEIYNFEPWDLPDKS 63

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BLAST of Carg26502 vs. TAIR10
Match: AT3G03200.1 (NAC domain containing protein 45)

HSP 1 Score: 80.9 bits (198), Expect = 1.3e-15
Identity = 36/55 (65.45%), Postives = 46/55 (83.64%), Query Frame = 0


Query: 17 MAVSSMFPGFRFSPTDEELISFYLKKKLDGYEKSVEIIAEVEIYKYEPWDLPGHS 72
          MA  S+ PGFRF PTDEELI++YLK+K++G E  +E+IAEV++YK EPWDLPG S
Sbjct: 1  MAPVSLPPGFRFHPTDEELITYYLKRKINGLEIELEVIAEVDLYKCEPWDLPGKS 55

[Close]

BLAST of Carg26502 vs. TAIR10
Match: AT5G17260.1 (NAC domain containing protein 86)

HSP 1 Score: 79.3 bits (194), Expect = 3.8e-15
Identity = 36/55 (65.45%), Postives = 45/55 (81.82%), Query Frame = 0


Query: 17 MAVSSMFPGFRFSPTDEELISFYLKKKLDGYEKSVEIIAEVEIYKYEPWDLPGHS 72
          MA  S+ PGFRF PTDEELI++YLK+K++G E  +EII EV++YK EPWDLPG S
Sbjct: 1  MAPVSLPPGFRFHPTDEELITYYLKRKINGQEIELEIIPEVDLYKCEPWDLPGKS 55

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BLAST of Carg26502 vs. Swiss-Prot
Match: sp|Q9XIN7|NAC40_ARATH (NAC domain-containing protein 40 OS=Arabidopsis thaliana OX=3702 GN=NTL8 PE=1 SV=1)

HSP 1 Score: 98.6 bits (244), Expect = 1.1e-19
Identity = 45/67 (67.16%), Postives = 57/67 (85.07%), Query Frame = 0


Query: 9  VSKELQLSMAVSSMFPGFRFSPTDEELISFYLKKKLDGYEKSVEIIAEVEIYKYEPWDLP 68
          +SKE ++S+AVS++FPGFRFSPTD ELIS+YL++K+DG E SV +IAEVEIYK+EPWDLP
Sbjct: 1  MSKEAEMSIAVSALFPGFRFSPTDVELISYYLRRKIDGDENSVAVIAEVEIYKFEPWDLP 60

Query: 69 GHSNRAS 76
            S   S
Sbjct: 61 EESKLKS 67

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BLAST of Carg26502 vs. Swiss-Prot
Match: sp|Q94F58|NAC89_ARATH (NAC domain-containing protein 89 OS=Arabidopsis thaliana OX=3702 GN=NAC089 PE=1 SV=1)

HSP 1 Score: 93.6 bits (231), Expect = 3.5e-18
Identity = 41/64 (64.06%), Postives = 53/64 (82.81%), Query Frame = 0


Query: 8  GVSKELQLSMAVSSMFPGFRFSPTDEELISFYLKKKLDGYEKSVEIIAEVEIYKYEPWDL 67
          GVSK+   SM  S++FPGF+FSPTD ELIS+YLK+K+DG E+SVE+I ++EIY +EPWDL
Sbjct: 7  GVSKDTAASMEASTVFPGFKFSPTDVELISYYLKRKMDGLERSVEVIPDLEIYNFEPWDL 66

Query: 68 PGHS 72
          P  S
Sbjct: 67 PDKS 70

[Close]

BLAST of Carg26502 vs. Swiss-Prot
Match: sp|Q9LXL9|NAC60_ARATH (NAC domain-containing protein 60 OS=Arabidopsis thaliana OX=3702 GN=NAC60 PE=2 SV=1)

HSP 1 Score: 87.0 bits (214), Expect = 3.3e-16
Identity = 39/54 (72.22%), Postives = 47/54 (87.04%), Query Frame = 0


Query: 18 AVSSMFPGFRFSPTDEELISFYLKKKLDGYEKSVEIIAEVEIYKYEPWDLPGHS 72
          AV++ FPGF+FSPTD ELIS+YLK+K+DG E+SVEII EVEIY +EPWDLP  S
Sbjct: 10 AVTTTFPGFKFSPTDIELISYYLKRKMDGLERSVEIIPEVEIYNFEPWDLPDKS 63

[Close]

BLAST of Carg26502 vs. Swiss-Prot
Match: sp|A4VCM0|NAC45_ARATH (NAC domain-containing protein 45 OS=Arabidopsis thaliana OX=3702 GN=NAC045 PE=2 SV=1)

HSP 1 Score: 80.9 bits (198), Expect = 2.4e-14
Identity = 36/55 (65.45%), Postives = 46/55 (83.64%), Query Frame = 0


Query: 17 MAVSSMFPGFRFSPTDEELISFYLKKKLDGYEKSVEIIAEVEIYKYEPWDLPGHS 72
          MA  S+ PGFRF PTDEELI++YLK+K++G E  +E+IAEV++YK EPWDLPG S
Sbjct: 1  MAPVSLPPGFRFHPTDEELITYYLKRKINGLEIELEVIAEVDLYKCEPWDLPGKS 55

[Close]

BLAST of Carg26502 vs. Swiss-Prot
Match: sp|Q9FFI5|NAC86_ARATH (NAC domain-containing protein 86 OS=Arabidopsis thaliana OX=3702 GN=NAC086 PE=2 SV=1)

HSP 1 Score: 79.3 bits (194), Expect = 6.9e-14
Identity = 36/55 (65.45%), Postives = 45/55 (81.82%), Query Frame = 0


Query: 17 MAVSSMFPGFRFSPTDEELISFYLKKKLDGYEKSVEIIAEVEIYKYEPWDLPGHS 72
          MA  S+ PGFRF PTDEELI++YLK+K++G E  +EII EV++YK EPWDLPG S
Sbjct: 1  MAPVSLPPGFRFHPTDEELITYYLKRKINGQEIELEIIPEVDLYKCEPWDLPGKS 55

[Close]

BLAST of Carg26502 vs. TrEMBL
Match: tr|A0A1S3CJQ8|A0A1S3CJQ8_CUCME (NAC domain-containing protein 89-like isoform X2 OS=Cucumis melo OX=3656 GN=LOC103501742 PE=4 SV=1)

HSP 1 Score: 225.7 bits (574), Expect = 1.2e-55
Identity = 177/365 (48.49%), Postives = 192/365 (52.60%), Query Frame = 0


Query: 1   MAAAAENGVSKELQLSMAVSSMFPGFRFSPTDEELISFYLKKKLDGYEKSVEIIAEVEIY 60
           MAA AEN VS+E+QLSMAVSSMFPGFRFSPTDEELISFYLKKKL+G+EKSVE+IAEVEIY
Sbjct: 1   MAAGAENRVSREVQLSMAVSSMFPGFRFSPTDEELISFYLKKKLEGHEKSVEVIAEVEIY 60

Query: 61  KYEPWDLPGH-------------------------------------------------- 120
           KYEPWDLP                                                    
Sbjct: 61  KYEPWDLPAKSIIQSDNEWFFFSPRGKKYPNGNQTRRATDLGYWKATGKERNVKSGSNTI 120

Query: 121 ----------------------------------------------------SNRASCSQ 180
                                                               SNRAS SQ
Sbjct: 121 GTKRTLVFHTGRAPKGERTEWIMHEYNTKDKAQDFLVVCRLRRNNEFRQHSCSNRASSSQ 180

Query: 181 MNLSSLQAHSGEQVDSTSESNQKDAAEAALVECSDGQKDYXXXXXXXXXXXXXXXXXXXX 240
           MNLSSLQAHS EQV                          XXXXXXXXXXXXXXXX    
Sbjct: 181 MNLSSLQAHSSEQVXXXXXXXXXXXXITHXXXXXXXXXXXXXXXXXXXXXXXXXXXLDTA 240

Query: 241 XXXAASDLMPLDFHRSDTARESQTEANDGLEWLPSQGFANRRIRLKRREATKAMKLDAVK 263
               ASD +PL F RSDT R SQ E ND  EWL +QG ANRRIRLK+REAT   KL+++K
Sbjct: 241 PFNGASDPLPLIFQRSDTERRSQHEENDVFEWLQNQGSANRRIRLKKREATGGKKLESMK 300

[Close]

BLAST of Carg26502 vs. TrEMBL
Match: tr|A0A1S3CJR1|A0A1S3CJR1_CUCME (NAC domain-containing protein 89-like isoform X1 OS=Cucumis melo OX=3656 GN=LOC103501742 PE=4 SV=1)

HSP 1 Score: 224.6 bits (571), Expect = 2.7e-55
Identity = 177/366 (48.36%), Postives = 192/366 (52.46%), Query Frame = 0


Query: 1   MAAAAENGVSKELQLSMAVSSMFPGFRFSPTDEELISFYLKKKLDGYEKSVEIIAEVEIY 60
           MAA AEN VS+E+QLSMAVSSMFPGFRFSPTDEELISFYLKKKL+G+EKSVE+IAEVEIY
Sbjct: 1   MAAGAENRVSREVQLSMAVSSMFPGFRFSPTDEELISFYLKKKLEGHEKSVEVIAEVEIY 60

Query: 61  KYEPWDLP---------------------------------------------------- 120
           KYEPWDLP                                                    
Sbjct: 61  KYEPWDLPVAKSIIQSDNEWFFFSPRGKKYPNGNQTRRATDLGYWKATGKERNVKSGSNT 120

Query: 121 ---------------------------------------------------GHSNRASCS 180
                                                                SNRAS S
Sbjct: 121 IGTKRTLVFHTGRAPKGERTEWIMHEYNTKDKAQDFLVVCRLRRNNEFRQHSCSNRASSS 180

Query: 181 QMNLSSLQAHSGEQVDSTSESNQKDAAEAALVECSDGQKDYXXXXXXXXXXXXXXXXXXX 240
           QMNLSSLQAHS EQV                          XXXXXXXXXXXXXXXX   
Sbjct: 181 QMNLSSLQAHSSEQVXXXXXXXXXXXXITHXXXXXXXXXXXXXXXXXXXXXXXXXXXLDT 240

Query: 241 XXXXAASDLMPLDFHRSDTARESQTEANDGLEWLPSQGFANRRIRLKRREATKAMKLDAV 263
                ASD +PL F RSDT R SQ E ND  EWL +QG ANRRIRLK+REAT   KL+++
Sbjct: 241 APFNGASDPLPLIFQRSDTERRSQHEENDVFEWLQNQGSANRRIRLKKREATGGKKLESM 300

[Close]

BLAST of Carg26502 vs. TrEMBL
Match: tr|A0A0A0LYC3|A0A0A0LYC3_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G168870 PE=4 SV=1)

HSP 1 Score: 219.2 bits (557), Expect = 1.1e-53
Identity = 161/365 (44.11%), Postives = 174/365 (47.67%), Query Frame = 0


Query: 1   MAAAAENGVSKELQLSMAVSSMFPGFRFSPTDEELISFYLKKKLDGYEKSVEIIAEVEIY 60
           MAAAAEN VS+E+QLSMAVSSMFPGFRFSPTDEELISFYLKKKL+GYEKSVE+IA+VEIY
Sbjct: 1   MAAAAENRVSREVQLSMAVSSMFPGFRFSPTDEELISFYLKKKLEGYEKSVEVIADVEIY 60

Query: 61  KYEPWDLPGH-------------------------------------------------- 120
           KYEPWDLP                                                    
Sbjct: 61  KYEPWDLPAKSIIQSDNEWFFFSPRGKKYPNGNQTRRATDLGYWKATGKERNVKSGSNTI 120

Query: 121 ----------------------------------------------------SNRASCSQ 180
                                                               SNRAS SQ
Sbjct: 121 GTKRTLVFHTGRAPKGERTEWIMHEYNTKDKAQDFLVVCRLRRNNEFRQHSCSNRASSSQ 180

Query: 181 MNLSSLQAHSGEQVDSTSESNQKDAAEAALVECSDGQKDYXXXXXXXXXXXXXXXXXXXX 240
           MNLS LQAHS EQVDST                       XXXX                
Sbjct: 181 MNLSLLQAHSSEQVDSTEXXXXXXXXXXXXXXXXXXXXXXXXXXFYSDILKDDIINLDTA 240

Query: 241 XXXAASDLMPLDFHRSDTARESQTEANDGLEWLPSQGFANRRIRLKRREATKAMKLDAVK 263
               A D +PL F RSDT R SQ E +DG EWLP+QG ANRRIRLK+REAT   KL++ K
Sbjct: 241 PLDGALDPLPLIFQRSDTERRSQHEGSDGFEWLPNQGSANRRIRLKKREATGGKKLESTK 300

[Close]

BLAST of Carg26502 vs. TrEMBL
Match: tr|A0A1S3CK82|A0A1S3CK82_CUCME (NAC domain-containing protein 89-like isoform X3 OS=Cucumis melo OX=3656 GN=LOC103501742 PE=4 SV=1)

HSP 1 Score: 147.9 bits (372), Expect = 3.2e-32
Identity = 116/193 (60.10%), Postives = 126/193 (65.28%), Query Frame = 0


Query: 71  SNRASCSQMNLSSLQAHSGEQVDSTSESNQKDAAEAALVECSDGQKDYXXXXXXXXXXXX 130
           SNRAS SQMNLSSLQAHS EQV                          XXXXXXXXXXXX
Sbjct: 120 SNRASSSQMNLSSLQAHSSEQVXXXXXXXXXXXXITHXXXXXXXXXXXXXXXXXXXXXXX 179

Query: 131 XXXXXXXXXXXAASDLMPLDFHRSDTARESQTEANDGLEWLPSQGFANRRIRLKRREATK 190
           XXXX        ASD +PL F RSDT R SQ E ND  EWL +QG ANRRIRLK+REAT 
Sbjct: 180 XXXXLDTAPFNGASDPLPLIFQRSDTERRSQHEENDVFEWLQNQGSANRRIRLKKREATG 239

Query: 191 AMKLDAVKIGGSRYKVEKVRFSSLKLWRSRLMNTASSISIF-GCYVRVVIFFLLILLALF 250
             KL+++KIG  R KVEK R  S ++  SRLMN  S  SI  G YVRVVIFFLLIL+ALF
Sbjct: 240 GKKLESMKIGDCRNKVEKARLCSTEVCESRLMNPDSCGSILRGYYVRVVIFFLLILMALF 299

Query: 251 MSRLEVFGMPKGL 263
           MSR +VFGMPKGL
Sbjct: 300 MSRWKVFGMPKGL 312

[Close]

BLAST of Carg26502 vs. TrEMBL
Match: tr|A0A2K3LVF6|A0A2K3LVF6_TRIPR (NAC domain-containing protein OS=Trifolium pratense OX=57577 GN=L195_g038549 PE=4 SV=1)

HSP 1 Score: 107.8 bits (268), Expect = 3.6e-20
Identity = 49/73 (67.12%), Postives = 61/73 (83.56%), Query Frame = 0


Query: 9  VSKELQLSMAVSSMFPGFRFSPTDEELISFYLKKKLDGYEKSVEIIAEVEIYKYEPWDLP 68
          VSKE Q+S+A SSMFPGFRF PTDEELIS+YL+KKLDG+E+SV++I+EVE+ KYEPWDLP
Sbjct: 6  VSKEAQMSIAASSMFPGFRFCPTDEELISYYLRKKLDGHEESVQVISEVELCKYEPWDLP 65

Query: 69 GHSNRASCSQMNL 82
          G+   A     N+
Sbjct: 66 GYIYEAQIPDTNI 78

The following BLAST results are available for this feature:

BLAST of Carg26502 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022927558.1	1.9e-105	70.95	NAC domain-containing protein 40-like isoform X2 [Cucurbita moschata]	[more]
XP_022927557.1	1.6e-104	69.59	NAC domain-containing protein 40-like isoform X1 [Cucurbita moschata]	[more]
XP_022973142.1	2.1e-104	67.51	NAC domain-containing protein 40-like isoform X2 [Cucurbita maxima]	[more]
XP_022973141.1	1.8e-103	66.21	NAC domain-containing protein 89-like isoform X1 [Cucurbita maxima]	[more]
XP_023520689.1	1.1e-97	65.85	LOW QUALITY PROTEIN: NAC domain-containing protein 89-like [Cucurbita pepo subsp...	[more]

BLAST of Carg26502 vs. TAIR10


Match Name	E-value	Identity	Description
AT2G27300.1	6.1e-21	67.16	NTM1-like 8	[more]
AT5G22290.1	2.0e-19	64.06	NAC domain containing protein 89	[more]
AT3G44290.1	1.8e-17	72.22	NAC domain containing protein 60	[more]
AT3G03200.1	1.3e-15	65.45	NAC domain containing protein 45	[more]
AT5G17260.1	3.8e-15	65.45	NAC domain containing protein 86	[more]

BLAST of Carg26502 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|Q9XIN7\|NAC40_ARATH	1.1e-19	67.16	NAC domain-containing protein 40 OS=Arabidopsis thaliana OX=3702 GN=NTL8 PE=1 SV...	[more]
sp\|Q94F58\|NAC89_ARATH	3.5e-18	64.06	NAC domain-containing protein 89 OS=Arabidopsis thaliana OX=3702 GN=NAC089 PE=1 ...	[more]
sp\|Q9LXL9\|NAC60_ARATH	3.3e-16	72.22	NAC domain-containing protein 60 OS=Arabidopsis thaliana OX=3702 GN=NAC60 PE=2 S...	[more]
sp\|A4VCM0\|NAC45_ARATH	2.4e-14	65.45	NAC domain-containing protein 45 OS=Arabidopsis thaliana OX=3702 GN=NAC045 PE=2 ...	[more]
sp\|Q9FFI5\|NAC86_ARATH	6.9e-14	65.45	NAC domain-containing protein 86 OS=Arabidopsis thaliana OX=3702 GN=NAC086 PE=2 ...	[more]

BLAST of Carg26502 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A1S3CJQ8\|A0A1S3CJQ8_CUCME	1.2e-55	48.49	NAC domain-containing protein 89-like isoform X2 OS=Cucumis melo OX=3656 GN=LOC1...	[more]
tr\|A0A1S3CJR1\|A0A1S3CJR1_CUCME	2.7e-55	48.36	NAC domain-containing protein 89-like isoform X1 OS=Cucumis melo OX=3656 GN=LOC1...	[more]
tr\|A0A0A0LYC3\|A0A0A0LYC3_CUCSA	1.1e-53	44.11	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G168870 PE=4 SV=1	[more]
tr\|A0A1S3CK82\|A0A1S3CK82_CUCME	3.2e-32	60.10	NAC domain-containing protein 89-like isoform X3 OS=Cucumis melo OX=3656 GN=LOC1...	[more]
tr\|A0A2K3LVF6\|A0A2K3LVF6_TRIPR	3.6e-20	67.12	NAC domain-containing protein OS=Trifolium pratense OX=57577 GN=L195_g038549 PE=...	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Molecular Function**
Term	Definition
GO:0003677	DNA binding

Vocabulary: **Biological Process**
Term	Definition
GO:0006355	regulation of transcription, DNA-templated

Vocabulary: **INTERPRO**
Term	Definition
IPR036093	NAC_dom_sf
IPR003441	NAC-dom

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006355	regulation of transcription, DNA-templated
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003677	DNA binding

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg26502-RA	Carg26502-RA	mRNA

InterPro

Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR003441	NAC domain	PFAM	PF02365	NAM	coord: 24..74 e-value: 2.7E-12 score: 47.6
IPR003441	NAC domain	PROSITE	PS51005	NAC	coord: 22..184 score: 14.357
IPR036093	NAC domain superfamily	GENE3D	G3DSA:3.30.310.150		coord: 31..104 e-value: 1.6E-11 score: 46.3
IPR036093	NAC domain superfamily	SUPERFAMILY	SSF101941	NAC domain	coord: 13..71
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 80..106
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 80..102
None	No IPR available	PANTHER	PTHR31989:SF40	NAC DOMAIN-CONTAINING PROTEIN 40-RELATED	coord: 73..248 coord: 9..71
None	No IPR available	PANTHER	PTHR31989	FAMILY NOT NAMED	coord: 73..248 coord: 9..71

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Carg26502	Csa1G168870	Cucumber (Chinese Long) v2	carcuB0998
Carg26502	ClCG01G011710	Watermelon (Charleston Gray)	carwcgB0960
Carg26502	CSPI01G15020	Wild cucumber (PI 183967)	carcpiB1021
Carg26502	CmaCh13G003480	Cucurbita maxima (Rimu)	carcmaB1362
Carg26502	CmoCh13G003790	Cucurbita moschata (Rifu)	carcmoB1323
Carg26502	Cp4.1LG00g01680	Cucurbita pepo (Zucchini)	carcpeB1370
Carg26502	CsGy1G014800	Cucumber (Gy14) v2	carcgybB0971
Carg26502	MELO3C025584.2	Melon (DHL92) v3.6.1	carmedB0967
Carg26502	Cla97C01G011320	Watermelon (97103) v2	carwmbB1037
Carg26502	Bhi08G000021	Wax gourd	carwgoB1154

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:

None