Carg26449 (gene) Silver-seed gourd
The following sequences are available for this feature:
Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.TCCCATTCCCTCCCCCACTGACCTAAATCCATTCTCCACGACCTTCACCTCCGTATCCATGGTGGGCGACGCCCACTTTGTTCAGACGCCGCCCAATTCCAAGAAATCCAAGAAGAAGAAGAAGAAGCGAGGCGGCACCAAGAAGAAGATGACTTCCGAGCAAACTGCGGCGTTTAAGTATGTCACGGAGTGGGTTTATTTGGATCAATCTAATTCTCTTGCCTCCACTGCCGCGGCGTCTGTGGTGGACGATTTTGGAGTTCAGAAAACTCTTGGCAAAGGTGGGGAGAAGGTCGTCTTTGACTTGCATTCGCATTCCAAATTCAGTGATGGATTTCTTTCCCCTTCGAAGCTGGTGGAGCGAGCTCATGGAAATGGGGTGATTCTTTCTTGTTTTTTCTTCCTCTTCTTCTGCTTTGTTTACTCAAAACTCCCGCTATTGAAATCCTTCTTCTCCCTGTCTGTTCTTCTGTTCTTATCCTGTTTCTGATATAGAATTTGTCTCAAATTTACATTCAAAAATGGGTGTTAGATGCAGAACAACACTTAACAATCTGTGCTACTTGTGAGATGAAACCTTTGGATTTCCAATATACCCTGTTTCTATTGTTCAGGTTTCTTCAGTAATCTGTGCTGTTTTTTAAAAGATTTGGTATCACATTCATCTAAAACATTTATGTATAGTTTGTTCAAGCATTACATTATTGGCCTTGTATTTTGTAGCCATATCTGTCATGCTTTAGTTAATTAGAAACATGTACCAACAACAGGTGAAAGTTCTTGCTTTGACAGATCATGATACAATGTCTGGTATCCCAGAGGCCATCGAAGCAGCTCGTAGATTTGGTATCAAAATAATTCCGGGTGTCGAAATCAGTACGATATTCTCTTCAGGGTGAGATCTTTGTTTCTTTTTCCCTCTTTGATGTTAAAATTCTGGAATTTGTATGCTATTATAGTACTCTCCTCAAGGTACGTTTTGTTTGTATTAAAACTCTGAGATTTTCATGCTTTTTTGATACTATTTAATGCAACATTGTGTTCAGTTGTTGAAAATTTTGTTGAATTGTGCCATGACATCTGTGTTGAGTTTTCGTTTGAAATAACTTTTGACCTTCTGATACATGGTAACTGATTTGGAGCAGTAACTCAGAATCAGAAGAACCAGTACACATCCTTGCATATTACAGCAGCTGTGGACCAGCAAAGATTGAGAAGTTGGAGAAGTTTTTAGAAAATATAAGAGAGGGGCGGTTTTTGCGTGCAAAGAACATGGTGTCAAAACTGAATGAGCTAAAGCTGCCTCTTAAATGGGATCATGTGGCTAAGATTACTGGTAAAGGAGTTGCTCCTGGGAGACTCCATGTGGCTCGTGCCATGGTTGAAGCAGGCTATGTCGAAAATCTAAAACAGGCATTTTCTCGTTACCTTTTTGATGGTGGACCGGCTTACTCAACGTGAGAATCTGAACTTGCTGTGCTTTTTTTTTATCATGGATTGTTGAACAATGTTGATGCATCATGGCTAAATAAGGGTGTGATATATCCTGCTCTATTTGTTTACCTCAAGCATCGGCATAGACTAATCCCTCCTACTTAAGGCTATCATTTGAGTCATTATGTTCATGAAATTGAAATCGATTTTCGTCCATAATTTTAAACAAGGTCACTAGTAAGTATGGCCACATGGATGTTTAAGTTACGTATCTAGTTGATTTTGCTACATGTATATGTCTATTGTTCTTTCTCATTCATACTTAACTTCATGGGATGTGGAATTTCTTCAGCTTCTTTATGTGTAACGGCCCAAGCCCACCGCTAGTAGATATTTTCCTCTTTAGGCTTCCCCTCAAGGTTTTTTAAACGTGTTTGGTAGGGAGAGGTTTCTACACCCTTATAAAGAATGTTTCCTTCTCCTCCCCAACATTCGGGGCTTAGCATCCTCGCTGGCACTCGTTCCCTTCTCCAGTCTATGTGGGATCCTCAATCCACTCCCATTCGAGGCCCAGCGTCCTTGCGACACACCTTCTCATGTCTACTCCCTTTGGGGCTCAGCCTCATTGCTGGCATATCGCCCGGTATCTGACTTTGATACCATTTGTAATGGCCCAAGCCTACCCCTAGCAGATATTGTTCTCTTTGGGTTTTCCCTTTCGGGTTTTTCCTCTAGGTTTTTAAAACGTGTCTGCTAGGGAGAGGTTTCCACACCGTTATAAAGAATGTTTCGTTCTCCTCCCCAACCGATGTGGGATCTCACAATATGCATATGCATCTTTATCTGCATATGATTCCGTGGAAGAAAGAATCCTAAGTTTACTTAAAATGCCAGGACATGAGAAGAGCTTACTTAATTTTCCTGGTTTAGTTTTGGACGAAACTAATCATATCACTTGTTAGCAGGCTGTGAATCTGTCTCTATGTTTCTGTACTTAAACCTATGCGTTTGAGTCGGACTTTCTTTCTTGCTCATTATGAAGATGGTGGCGGGATATGCATACTTGTTAGCCAAAATGTTCGTTATTTGGATTGGGTAAAAGTACGTCTTGCCCGGTTTTTAAACTGTAACAATGAGAAACGAGTTTATTTTCCAGGGGATCAGAGCCTTGTGCAGAGAAAGCAATACAATTGATACACGAAACAGGGGGTGTGGCTGTCCTAGCTCATCCATGGGCCTTGAAGAATCCTGTTGCTATCATTAGAAGATTGAAAGATGCCGGTCTTCACGGGCTGGAGGTTTACCGGAGCGATGGAAAATTAGCAGGTACACAATTCGCTCGGCCATATATACTTTCTTGTTATGTTATAAGCATGCTCTTGTTTTTCCAGTATTCTAGAATGGTCTGAAAAATTTGAGCCATGTAATGCATAGCTTGTTAAGGATTAAAGGCCCTTGGAGTATCTTCTGATAACATGTTGCCATTTTTCCCGGCCCGTGTATTGTTCTTTTAGCTGTTTGGATCGGTTTTCAAATATCTTGACTTAGACAATCGACATCGAATTCATATGTTTGTGTCGATTGACAGCGTACAGTGACCTAGCAGACATGAATGGGCTTCTAAAACTTGGAGGATCAGATTTTCACGGAAGAGGTGGAAACAGTGAATCCGAAGTTGGAAGTGTAAACCTTCCTGTTCTTGCTATGCACGACTTTCTCAAGGTCGCTCGACCAATTTGGTGCAGTGCCATTCGAGACATTCTCGATAGTTACGTCGAAGAGCCTTCAGACTCAAATCTAGCAAAAATTACCAGATTCGGAAGGACCCGGGTTTTGAAGGGTGGCTCCCCACCGCCGAGCTGCGTAAATGACATCATCGATCATTGTTTAACTTCGTGGCTGACGAACGAAGAGAAGCAAGATGCCGAGTTTGAAGCTATCAGATTAAAGCTCTCCCATATTTCAATGAAACAACAAGAAGTTCAGGTGCCTTAAGAGTTCATAACACTAACCAAGGTCGATCATGAATACTCGCTCGTCGTGCTAACATAGTCGACATGTGGATCAGATTCAGTAAGTTTTTTGTACTTTCCATAGTTACTGTTCTTTTGATGGGGAAAGCAGGTTGCAGTAGATGATTCGTTGAGGTACGTCGACGAACGAAAAGCTCCGATTATCGTAAGTTATATACTTTTTGTTCAAATCAATAAAACTTGATTCAATCTCTTGCAAGTATTTTGTTGATTGTTTATGTATTTAATTGGATCTCCATGCCTACACCAATCTTTTTGGCAACGTTGAAAATGAAAAAGGACTTGATGGAAGAGTTTTTGTGCTTAATTTTCTTTTAATCTCTCAATAGGGTTTGCTATTCTCGGGTTAAATTAATAAAAATATCATCATTCAATTTGCATACTATCTCGAAATTATCTTTAAATTTCCAAAAAGTTCCAATAATACCCTTGAATATCATTGAATTTTG TCCCATTCCCTCCCCCACTGACCTAAATCCATTCTCCACGACCTTCACCTCCGTATCCATGGTGGGCGACGCCCACTTTGTTCAGACGCCGCCCAATTCCAAGAAATCCAAGAAGAAGAAGAAGAAGCGAGGCGGCACCAAGAAGAAGATGACTTCCGAGCAAACTGCGGCGTTTAAGTATGTCACGGAGTGGGTTTATTTGGATCAATCTAATTCTCTTGCCTCCACTGCCGCGGCGTCTGTGGTGGACGATTTTGGAGTTCAGAAAACTCTTGGCAAAGGTGGGGAGAAGGTCGTCTTTGACTTGCATTCGCATTCCAAATTCAGTGATGGATTTCTTTCCCCTTCGAAGCTGGTGGAGCGAGCTCATGGAAATGGGTTAATTAGAAACATGTACCAACAACAGGTGAAAGTTCTTGCTTTGACAGATCATGATACAATGTCTGGTATCCCAGAGGCCATCGAAGCAGCTCGTAGATTTGGTATCAAAATAATTCCGGGTGTCGAAATCAGTACGATATTCTCTTCAGGTAACTCAGAATCAGAAGAACCAGTACACATCCTTGCATATTACAGCAGCTGTGGACCAGCAAAGATTGAGAAGTTGGAGAAGTTTTTAGAAAATATAAGAGAGGGGCGGTTTTTGCGTGCAAAGAACATGGTGTCAAAACTGAATGAGCTAAAGCTGCCTCTTAAATGGGATCATGTGGCTAAGATTACTGGTAAAGGAGTTGCTCCTGGGAGACTCCATGTGGCTCGTGCCATGGTTGAAGCAGGCTATGTCGAAAATCTAAAACAGGCATTTTCTCGTTACCTTTTTGATGGTGGACCGGCTTACTCAACGGGATCAGAGCCTTGTGCAGAGAAAGCAATACAATTGATACACGAAACAGGGGGTGTGGCTGTCCTAGCTCATCCATGGGCCTTGAAGAATCCTGTTGCTATCATTAGAAGATTGAAAGATGCCGGTCTTCACGGGCTGGAGGTTTACCGGAGCGATGGAAAATTAGCAGCGTACAGTGACCTAGCAGACATGAATGGGCTTCTAAAACTTGGAGGATCAGATTTTCACGGAAGAGGTGGAAACAGTGAATCCGAAGTTGGAAGTGTAAACCTTCCTGTTCTTGCTATGCACGACTTTCTCAAGGTCGCTCGACCAATTTGGTGCAGTGCCATTCGAGACATTCTCGATAGTTACGTCGAAGAGCCTTCAGACTCAAATCTAGCAAAAATTACCAGATTCGGAAGGACCCGGGTTTTGAAGGGTGGCTCCCCACCGCCGAGCTGCGTAAATGACATCATCGATCATTGTTTAACTTCGTGGCTGACGAACGAAGAGAAGCAAGATGCCGAGTTTGAAGCTATCAGATTAAAGCTCTCCCATATTTCAATGAAACAACAAGAAGTTCAGGTGCCTTAAGAGTTCATAACACTAACCAAGGTCGATCATGAATACTCGCTCGTCGTGCTAACATAGTCGACATGTGGATCAGATTCAGTAAGTTTTTTGTACTTTCCATAGTTACTGTTCTTTTGATGGGGAAAGCAGGTTGCAGTAGATGATTCGTTGAGGTACGTCGACGAACGAAAAGCTCCGATTATCGTAAGTTATATACTTTTTGTTCAAATCAATAAAACTTGATTCAATCTCTTGCAAGTATTTTGTTGATTGTTTATGTATTTAATTGGATCTCCATGCCTACACCAATCTTTTTGGCAACGTTGAAAATGAAAAAGGACTTGATGGAAGAGTTTTTGTGCTTAATTTTCTTTTAATCTCTCAATAGGGTTTGCTATTCTCGGGTTAAATTAATAAAAATATCATCATTCAATTTGCATACTATCTCGAAATTATCTTTAAATTTCCAAAAAGTTCCAATAATACCCTTGAATATCATTGAATTTTG ATGGTGGGCGACGCCCACTTTGTTCAGACGCCGCCCAATTCCAAGAAATCCAAGAAGAAGAAGAAGAAGCGAGGCGGCACCAAGAAGAAGATGACTTCCGAGCAAACTGCGGCGTTTAAGTATGTCACGGAGTGGGTTTATTTGGATCAATCTAATTCTCTTGCCTCCACTGCCGCGGCGTCTGTGGTGGACGATTTTGGAGTTCAGAAAACTCTTGGCAAAGGTGGGGAGAAGGTCGTCTTTGACTTGCATTCGCATTCCAAATTCAGTGATGGATTTCTTTCCCCTTCGAAGCTGGTGGAGCGAGCTCATGGAAATGGGTTAATTAGAAACATGTACCAACAACAGGTGAAAGTTCTTGCTTTGACAGATCATGATACAATGTCTGGTATCCCAGAGGCCATCGAAGCAGCTCGTAGATTTGGTATCAAAATAATTCCGGGTGTCGAAATCAGTACGATATTCTCTTCAGGTAACTCAGAATCAGAAGAACCAGTACACATCCTTGCATATTACAGCAGCTGTGGACCAGCAAAGATTGAGAAGTTGGAGAAGTTTTTAGAAAATATAAGAGAGGGGCGGTTTTTGCGTGCAAAGAACATGGTGTCAAAACTGAATGAGCTAAAGCTGCCTCTTAAATGGGATCATGTGGCTAAGATTACTGGTAAAGGAGTTGCTCCTGGGAGACTCCATGTGGCTCGTGCCATGGTTGAAGCAGGCTATGTCGAAAATCTAAAACAGGCATTTTCTCGTTACCTTTTTGATGGTGGACCGGCTTACTCAACGGGATCAGAGCCTTGTGCAGAGAAAGCAATACAATTGATACACGAAACAGGGGGTGTGGCTGTCCTAGCTCATCCATGGGCCTTGAAGAATCCTGTTGCTATCATTAGAAGATTGAAAGATGCCGGTCTTCACGGGCTGGAGGTTTACCGGAGCGATGGAAAATTAGCAGCGTACAGTGACCTAGCAGACATGAATGGGCTTCTAAAACTTGGAGGATCAGATTTTCACGGAAGAGGTGGAAACAGTGAATCCGAAGTTGGAAGTGTAAACCTTCCTGTTCTTGCTATGCACGACTTTCTCAAGGTCGCTCGACCAATTTGGTGCAGTGCCATTCGAGACATTCTCGATAGTTACGTCGAAGAGCCTTCAGACTCAAATCTAGCAAAAATTACCAGATTCGGAAGGACCCGGGTTTTGAAGGGTGGCTCCCCACCGCCGAGCTGCGTAAATGACATCATCGATCATTGTTTAACTTCGTGGCTGACGAACGAAGAGAAGCAAGATGCCGAGTTTGAAGCTATCAGATTAAAGCTCTCCCATATTTCAATGAAACAACAAGAAGTTCAGGTGCCTTAA MVGDAHFVQTPPNSKKSKKKKKKRGGTKKKMTSEQTAAFKYVTEWVYLDQSNSLASTAAASVVDDFGVQKTLGKGGEKVVFDLHSHSKFSDGFLSPSKLVERAHGNGLIRNMYQQQVKVLALTDHDTMSGIPEAIEAARRFGIKIIPGVEISTIFSSGNSESEEPVHILAYYSSCGPAKIEKLEKFLENIREGRFLRAKNMVSKLNELKLPLKWDHVAKITGKGVAPGRLHVARAMVEAGYVENLKQAFSRYLFDGGPAYSTGSEPCAEKAIQLIHETGGVAVLAHPWALKNPVAIIRRLKDAGLHGLEVYRSDGKLAAYSDLADMNGLLKLGGSDFHGRGGNSESEVGSVNLPVLAMHDFLKVARPIWCSAIRDILDSYVEEPSDSNLAKITRFGRTRVLKGGSPPPSCVNDIIDHCLTSWLTNEEKQDAEFEAIRLKLSHISMKQQEVQVP
BLAST of Carg26449 vs. NCBI nr
Match: XP_022927883.1 (uncharacterized protein LOC111434646 [Cucurbita moschata]) HSP 1 Score: 822.4 bits (2123), Expect = 7.6e-235 Identity = 440/453 (97.13%), Postives = 441/453 (97.35%), Query Frame = 0
BLAST of Carg26449 vs. NCBI nr
Match: XP_023531739.1 (uncharacterized protein LOC111793902 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 822.0 bits (2122), Expect = 9.9e-235 Identity = 440/453 (97.13%), Postives = 443/453 (97.79%), Query Frame = 0
BLAST of Carg26449 vs. NCBI nr
Match: XP_022988784.1 (uncharacterized protein LOC111486022 [Cucurbita maxima]) HSP 1 Score: 813.9 bits (2101), Expect = 2.7e-232 Identity = 436/453 (96.25%), Postives = 440/453 (97.13%), Query Frame = 0
BLAST of Carg26449 vs. NCBI nr
Match: XP_004136869.1 (PREDICTED: uncharacterized protein LOC101218042 [Cucumis sativus] >KGN43710.1 hypothetical protein Csa_7G062760 [Cucumis sativus]) HSP 1 Score: 744.2 bits (1920), Expect = 2.6e-211 Identity = 398/454 (87.67%), Postives = 420/454 (92.51%), Query Frame = 0
BLAST of Carg26449 vs. NCBI nr
Match: XP_008455216.1 (PREDICTED: 3',5'-nucleoside bisphosphate phosphatase [Cucumis melo]) HSP 1 Score: 738.8 bits (1906), Expect = 1.1e-209 Identity = 401/454 (88.33%), Postives = 423/454 (93.17%), Query Frame = 0
BLAST of Carg26449 vs. TAIR10
Match: AT2G13840.1 (Polymerase/histidinol phosphatase-like) HSP 1 Score: 528.5 bits (1360), Expect = 4.1e-150 Identity = 258/408 (63.24%), Postives = 324/408 (79.41%), Query Frame = 0
BLAST of Carg26449 vs. Swiss-Prot
Match: sp|Q7NXD4|35NBP_CHRVO (3',5'-nucleoside bisphosphate phosphatase OS=Chromobacterium violaceum (strain ATCC 12472 / DSM 30191 / JCM 1249 / NBRC 12614 / NCIMB 9131 / NCTC 9757) OX=243365 GN=CV_1693 PE=1 SV=1) HSP 1 Score: 129.0 bits (323), Expect = 1.3e-28 Identity = 100/297 (33.67%), Postives = 141/297 (47.47%), Query Frame = 0
BLAST of Carg26449 vs. Swiss-Prot
Match: sp|P44176|RNAAM_HAEIN (5'-3' exoribonuclease OS=Haemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd) OX=71421 GN=HI_1400 PE=3 SV=1) HSP 1 Score: 124.0 bits (310), Expect = 4.2e-27 Identity = 96/269 (35.69%), Postives = 133/269 (49.44%), Query Frame = 0
BLAST of Carg26449 vs. Swiss-Prot
Match: sp|O54453|RNAAM_SALTY (5'-3' exoribonuclease OS=Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720) OX=99287 GN=trpH PE=3 SV=3) HSP 1 Score: 122.1 bits (305), Expect = 1.6e-26 Identity = 90/270 (33.33%), Postives = 127/270 (47.04%), Query Frame = 0
BLAST of Carg26449 vs. Swiss-Prot
Match: sp|P77766|RNAAM_ECOLI (5'-3' exoribonuclease OS=Escherichia coli (strain K12) OX=83333 GN=yciV PE=1 SV=1) HSP 1 Score: 114.8 bits (286), Expect = 2.6e-24 Identity = 89/271 (32.84%), Postives = 127/271 (46.86%), Query Frame = 0
BLAST of Carg26449 vs. Swiss-Prot
Match: sp|C8WJZ5|PHNPP_EGGLE (Phosphoribosyl 1,2-cyclic phosphate 1,2-diphosphodiesterase OS=Eggerthella lenta (strain ATCC 25559 / DSM 2243 / JCM 9979 / NCTC 11813 / VPI 0255) OX=479437 GN=phnPP PE=1 SV=1) HSP 1 Score: 91.3 bits (225), Expect = 3.0e-17 Identity = 75/268 (27.99%), Postives = 124/268 (46.27%), Query Frame = 0
BLAST of Carg26449 vs. TrEMBL
Match: tr|A0A0A0K205|A0A0A0K205_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G062760 PE=4 SV=1) HSP 1 Score: 744.2 bits (1920), Expect = 1.7e-211 Identity = 398/454 (87.67%), Postives = 420/454 (92.51%), Query Frame = 0
BLAST of Carg26449 vs. TrEMBL
Match: tr|A0A1S3C0E5|A0A1S3C0E5_CUCME (3',5'-nucleoside bisphosphate phosphatase OS=Cucumis melo OX=3656 GN=LOC103495435 PE=4 SV=1) HSP 1 Score: 738.8 bits (1906), Expect = 7.3e-210 Identity = 401/454 (88.33%), Postives = 423/454 (93.17%), Query Frame = 0
BLAST of Carg26449 vs. TrEMBL
Match: tr|A0A2C9UND5|A0A2C9UND5_MANES (Uncharacterized protein OS=Manihot esculenta OX=3983 GN=MANES_14G166700 PE=4 SV=1) HSP 1 Score: 666.8 bits (1719), Expect = 3.5e-188 Identity = 329/418 (78.71%), Postives = 373/418 (89.23%), Query Frame = 0
BLAST of Carg26449 vs. TrEMBL
Match: tr|A0A067JX52|A0A067JX52_JATCU (Uncharacterized protein OS=Jatropha curcas OX=180498 GN=JCGZ_20197 PE=4 SV=1) HSP 1 Score: 659.1 bits (1699), Expect = 7.3e-186 Identity = 327/419 (78.04%), Postives = 374/419 (89.26%), Query Frame = 0
BLAST of Carg26449 vs. TrEMBL
Match: tr|A0A2I4GGG7|A0A2I4GGG7_9ROSI (uncharacterized protein LOC109007680 OS=Juglans regia OX=51240 GN=LOC109007680 PE=4 SV=1) HSP 1 Score: 656.8 bits (1693), Expect = 3.6e-185 Identity = 327/417 (78.42%), Postives = 366/417 (87.77%), Query Frame = 0
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene: None |