Carg26389 (gene) Silver-seed gourd | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Carg26389
Type	gene
Organism	Cucurbita argyrosperma (Silver-seed gourd)
Description	protein XRI1
Location	Cucurbita_argyrosperma_scaffold_377 : 90005 .. 91043 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTGGAACTCAGGAACTTTGTTGGGACTCCGGACATTCAAATTGATGTATCAGGTGACGTTCGTTAAACCATTTGTTTAAGTGTTGATCTTGTTATGGTGGATGACATTAGTTTATTCGAACGTGTAGAGTTTTGTGACGTTATACCTGAGTTCAAATCTAATGCCGTTCAACATCATCCTACTCGAACTCCTCGGAACATAATCTTTAAAGGTTCTATTCTGCTCAACTTTTTTGATGCATCATTTTGTCTATGGACCGTATTCCATTTTCTCGTGTCACCGAGTTAATGTCTTGCATACCATTGGCCTGTACGTGCAGGTCGAAAGTCATACATTAGAACTCCCACTAAACTGGCTTCTTCAATTGCCTACCCATTTGCCTTCATCAAGCCCTGTGGATTCCATGGCGACGTTACCTTGAAAGACATAAACCAGCGGATCCGCACACCTCCACCGTCAAAATCGAAGCATCATCCGGAAGACCCCTCTCTATCTTACCCAACTTCAGCATTCTCTGGAAAGCCCGTGGTAGGTAAAACCAAGATTCATACCGAAGGCGGTAAGGGAAGCATCACAATCATGAGGACCAAAGGTTGAACAAACCGAAAACGATTTCCGCTATCCAGACTTTCCTTTTAACTGCCCGTCGGTCCATCCCGGGGGGATTTGTAAAATGTCAGGGCCATCAAGTAAGTAGTACAGAAGGTGATTAACTTCCATTTTTGGTCGGGATAGATAGATAGATAGATAAATAGAAAGAAAGAGACAAAGAGAGAGATATGTAGGAGTATTAGAGTTGCTCTTGGAATCCCTAATCATATGTTCGAGTTTGTCGACATATGTTTACGCTTCCAAGTGAACTCTTGTAGGTCGTTCGAGTTCAAGCTCGACACCGATATGATTATGCATCGTTTTTAGATTTGAAAACACTTCTTATCCTTATGTTTATTATCAAATCATTCCATTCCTTATGCATTGTGAACCTGTTCTGTAATGCTTTTGCTGGAAAGCTTAAAAGAATTGGATCTCTCTCTCTC

mRNA sequence

ATGTGGAACTCAGGAACTTTGTTGGGACTCCGGACATTCAAATTGATGTATCAGGTGACTGTTGATCTTGTTATGGTGGATGACATTAGTTTATTCGAACGTGTAGAGTTTTGTGACGTTATACCTGAGTTCAAATCTAATGCCGTTCAACATCATCCTACTCGAACTCCTCGGAACATAATCTTTAAAGGTCGAAAGTCATACATTAGAACTCCCACTAAACTGGCTTCTTCAATTGCCTACCCATTTGCCTTCATCAAGCCCTGTGGATTCCATGGCGACGTTACCTTGAAAGACATAAACCAGCGGATCCGCACACCTCCACCGTCAAAATCGAAGCATCATCCGGAAGACCCCTCTCTATCTTACCCAACTTCAGCATTCTCTGGAAAGCCCGTGGTAGGTAAAACCAAGATTCATACCGAAGGCGGTAAGGGAAGCATCACAATCATGAGGACCAAAGGTTGAACAAACCGAAAACGATTTCCGCTATCCAGACTTTCCTTTTAACTGCCCGTCGGTCCATCCCGGGGGGATTTGTAAAATGTCAGGGCCATCAAGTAAGTAGTACAGAAGGTGATTAACTTCCATTTTTGGTCGGGATAGATAGATAGATAGATAAATAGAAAGAAAGAGACAAAGAGAGAGATATGTAGGAGTATTAGAGTTGCTCTTGGAATCCCTAATCATATGTTCGAGTTTGTCGACATATGTTTACGCTTCCAAGTGAACTCTTGTAGGTCGTTCGAGTTCAAGCTCGACACCGATATGATTATGCATCGTTTTTAGATTTGAAAACACTTCTTATCCTTATGTTTATTATCAAATCATTCCATTCCTTATGCATTGTGAACCTGTTCTGTAATGCTTTTGCTGGAAAGCTTAAAAGAATTGGATCTCTCTCTCTC

Coding sequence (CDS)

ATGTGGAACTCAGGAACTTTGTTGGGACTCCGGACATTCAAATTGATGTATCAGGTGACTGTTGATCTTGTTATGGTGGATGACATTAGTTTATTCGAACGTGTAGAGTTTTGTGACGTTATACCTGAGTTCAAATCTAATGCCGTTCAACATCATCCTACTCGAACTCCTCGGAACATAATCTTTAAAGGTCGAAAGTCATACATTAGAACTCCCACTAAACTGGCTTCTTCAATTGCCTACCCATTTGCCTTCATCAAGCCCTGTGGATTCCATGGCGACGTTACCTTGAAAGACATAAACCAGCGGATCCGCACACCTCCACCGTCAAAATCGAAGCATCATCCGGAAGACCCCTCTCTATCTTACCCAACTTCAGCATTCTCTGGAAAGCCCGTGGTAGGTAAAACCAAGATTCATACCGAAGGCGGTAAGGGAAGCATCACAATCATGAGGACCAAAGGTTGA

Protein sequence

MWNSGTLLGLRTFKLMYQVTVDLVMVDDISLFERVEFCDVIPEFKSNAVQHHPTRTPRNIIFKGRKSYIRTPTKLASSIAYPFAFIKPCGFHGDVTLKDINQRIRTPPPSKSKHHPEDPSLSYPTSAFSGKPVVGKTKIHTEGGKGSITIMRTKG

Homology

[Close]

BLAST of Carg26389 vs. NCBI nr
Match: XP_022963649.1 (protein XRI1-like [Cucurbita moschata])

HSP 1 Score: 251.5 bits (641), Expect = 1.8e-63
Identity = 119/120 (99.17%), Postives = 120/120 (100.00%), Query Frame = 0


Query: 36  EFCDVIPEFKSNAVQHHPTRTPRNIIFKGRKSYIRTPTKLASSIAYPFAFIKPCGFHGDV 95
           EFCDVIPEFKSNAVQHHPTRTPRNIIFKGRKSYIRTPTKLASSIAYPFAFIKPCGFHGDV
Sbjct: 185 EFCDVIPEFKSNAVQHHPTRTPRNIIFKGRKSYIRTPTKLASSIAYPFAFIKPCGFHGDV 244

Query: 96  TLKDINQRIRTPPPSKSKHHPEDPSLSYPTSAFSGKPVVGKTKIHTEGGKGSITIMRTKG 155
           TLKDINQRIRTPPPSKSKHHPEDPSLSYPTSAFSGKPVVGKTKIHTEGGKGSITIMRT+G
Sbjct: 245 TLKDINQRIRTPPPSKSKHHPEDPSLSYPTSAFSGKPVVGKTKIHTEGGKGSITIMRTRG 304

[Close]

BLAST of Carg26389 vs. NCBI nr
Match: XP_023511506.1 (protein XRI1-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 251.5 bits (641), Expect = 1.8e-63
Identity = 119/120 (99.17%), Postives = 120/120 (100.00%), Query Frame = 0


Query: 36  EFCDVIPEFKSNAVQHHPTRTPRNIIFKGRKSYIRTPTKLASSIAYPFAFIKPCGFHGDV 95
           EFCDVIPEFKSNAVQHHPTRTPRNIIFKGRKSYIRTPTKLASSIAYPFAFIKPCGFHGDV
Sbjct: 185 EFCDVIPEFKSNAVQHHPTRTPRNIIFKGRKSYIRTPTKLASSIAYPFAFIKPCGFHGDV 244

Query: 96  TLKDINQRIRTPPPSKSKHHPEDPSLSYPTSAFSGKPVVGKTKIHTEGGKGSITIMRTKG 155
           TLKDINQRIRTPPPSKSKHHPEDPSLSYPTSAFSGKPVVGKTKIHTEGGKGSITIMRT+G
Sbjct: 245 TLKDINQRIRTPPPSKSKHHPEDPSLSYPTSAFSGKPVVGKTKIHTEGGKGSITIMRTRG 304

[Close]

BLAST of Carg26389 vs. NCBI nr
Match: XP_022967302.1 (protein XRI1-like [Cucurbita maxima])

HSP 1 Score: 246.5 bits (628), Expect = 5.9e-62
Identity = 117/120 (97.50%), Postives = 119/120 (99.17%), Query Frame = 0


Query: 36  EFCDVIPEFKSNAVQHHPTRTPRNIIFKGRKSYIRTPTKLASSIAYPFAFIKPCGFHGDV 95
           EFCDVIPEFKSNAVQHHPTRTPRNIIFKGRKSYIRTPTKLASSIAYPFAFIKPCGFHGDV
Sbjct: 185 EFCDVIPEFKSNAVQHHPTRTPRNIIFKGRKSYIRTPTKLASSIAYPFAFIKPCGFHGDV 244

Query: 96  TLKDINQRIRTPPPSKSKHHPEDPSLSYPTSAFSGKPVVGKTKIHTEGGKGSITIMRTKG 155
           TLKDINQRIRTPPPSKSKHH EDPSLSYPTSAFSGKPVVGKTKIHT+GGKGSITIMRT+G
Sbjct: 245 TLKDINQRIRTPPPSKSKHHLEDPSLSYPTSAFSGKPVVGKTKIHTDGGKGSITIMRTRG 304

[Close]

BLAST of Carg26389 vs. NCBI nr
Match: XP_022159878.1 (protein XRI1 [Momordica charantia])

HSP 1 Score: 241.1 bits (614), Expect = 2.5e-60
Identity = 113/120 (94.17%), Postives = 116/120 (96.67%), Query Frame = 0


Query: 36  EFCDVIPEFKSNAVQHHPTRTPRNIIFKGRKSYIRTPTKLASSIAYPFAFIKPCGFHGDV 95
           EFCDV+PE KSNAVQHHPTR PRNIIFKGRKSYIRTPTKLASS+AYPFAFIKPCGFHGDV
Sbjct: 185 EFCDVMPELKSNAVQHHPTRAPRNIIFKGRKSYIRTPTKLASSVAYPFAFIKPCGFHGDV 244

Query: 96  TLKDINQRIRTPPPSKSKHHPEDPSLSYPTSAFSGKPVVGKTKIHTEGGKGSITIMRTKG 155
           TLKDINQRIRTPPPSK KHHPEDPS SYPTSAFSGKPVVGKTKIHTEGGKGSITIMRT+G
Sbjct: 245 TLKDINQRIRTPPPSKLKHHPEDPSQSYPTSAFSGKPVVGKTKIHTEGGKGSITIMRTRG 304

[Close]

BLAST of Carg26389 vs. NCBI nr
Match: XP_022930895.1 (protein XRI1-like [Cucurbita moschata] >XP_023532484.1 protein XRI1-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 237.7 bits (605), Expect = 2.7e-59
Identity = 112/120 (93.33%), Postives = 115/120 (95.83%), Query Frame = 0


Query: 36  EFCDVIPEFKSNAVQHHPTRTPRNIIFKGRKSYIRTPTKLASSIAYPFAFIKPCGFHGDV 95
           EFC+V PEFKSNAVQHHPTR PRNIIFKGRKSYIRTPTKLASS+AYPFAFIKPCGFHGDV
Sbjct: 182 EFCNVAPEFKSNAVQHHPTRVPRNIIFKGRKSYIRTPTKLASSVAYPFAFIKPCGFHGDV 241

Query: 96  TLKDINQRIRTPPPSKSKHHPEDPSLSYPTSAFSGKPVVGKTKIHTEGGKGSITIMRTKG 155
           TLKDINQRIRTPPPSK KH PEDPS SYPTSAFSGKPVVGKTKIHTEGGKGSITIMRT+G
Sbjct: 242 TLKDINQRIRTPPPSKLKHQPEDPSQSYPTSAFSGKPVVGKTKIHTEGGKGSITIMRTRG 301

[Close]

BLAST of Carg26389 vs. TAIR10
Match: AT5G48720.2 (x-ray induced transcript 1)

HSP 1 Score: 152.1 bits (383), Expect = 2.7e-37
Identity = 79/120 (65.83%), Postives = 94/120 (78.33%), Query Frame = 0


Query: 36  EFCDVIPEFKSNAVQHHPTRTPRNIIFKGRKSYIRTPTKLASSIAYPFAFIKPCGFHGDV 95
           E+ +V PE ++  VQ   TR+  N+IFKGRKS+ R  +KL SSI YPFAFIKPCG HG +
Sbjct: 183 EYLNVPPETETREVQRPVTRSSPNVIFKGRKSFSRPVSKLPSSIIYPFAFIKPCGVHGGM 242

Query: 96  TLKDINQRIRTPPPSKSKHHPEDPSLSYPTSAFSGKPVVGKTKIHTEGGKGSITIMRTKG 155
           TLKDINQ+IR  PP+K K H E+P++   TSAFSGKPVVGKTKI TEGGKGSITIMRT+G
Sbjct: 243 TLKDINQKIRN-PPAKPKAHIEEPAV-IQTSAFSGKPVVGKTKIRTEGGKGSITIMRTRG 300

[Close]

BLAST of Carg26389 vs. TAIR10
Match: AT2G01990.1 (unknown protein)

HSP 1 Score: 67.0 bits (162), Expect = 1.2e-11
Identity = 39/86 (45.35%), Postives = 50/86 (58.14%), Query Frame = 0


Query: 74  KLASSIAYPFAFIKPCGFHGDVTLKDINQRIRTPPPSKSKHHPED----PSLSYPTSAFS 133
           +L + + YPF  +KP G   DVTL DIN+RI   P    +H   D    P +S      S
Sbjct: 129 RLITKLVYPFGLVKPGGRENDVTLNDINERILMAPSRPIRHPVGDFASRPCVSGRGPGLS 188

Query: 134 GKPVVGKTKIHTEGGKGSITIMRTKG 156
           GK VV  TKI T+ G+G+ITI+RTKG
Sbjct: 189 GKAVVALTKIQTQ-GRGTITIIRTKG 213

[Close]

BLAST of Carg26389 vs. TAIR10
Match: AT1G14630.1 (unknown protein)

HSP 1 Score: 61.2 bits (147), Expect = 6.4e-10
Identity = 37/81 (45.68%), Postives = 46/81 (56.79%), Query Frame = 0


Query: 79  IAYPFAFIKPCGFHGDVTLKDINQRIRTPPPSKSKHHPED----PSLSYPTSAFSGKPVV 138
           + YPF  +KP G   D+TL DIN+RI  P     +H   D    P +S      SGK VV
Sbjct: 147 VVYPFGVVKPGGREEDITLNDINKRILMPSARPVRHPVGDFACRPCVSADGPGLSGKAVV 206

Query: 139 GKTKIHTEGGKGSITIMRTKG 156
             TKI T  G+G+ITI+RTKG
Sbjct: 207 AFTKIQTL-GRGTITIIRTKG 226

[Close]

BLAST of Carg26389 vs. Swiss-Prot
Match: sp|Q6NLW5|XRI1_ARATH (Protein XRI1 OS=Arabidopsis thaliana OX=3702 GN=XRI1 PE=1 SV=2)

HSP 1 Score: 152.1 bits (383), Expect = 4.9e-36
Identity = 79/120 (65.83%), Postives = 94/120 (78.33%), Query Frame = 0


Query: 36  EFCDVIPEFKSNAVQHHPTRTPRNIIFKGRKSYIRTPTKLASSIAYPFAFIKPCGFHGDV 95
           E+ +V PE ++  VQ   TR+  N+IFKGRKS+ R  +KL SSI YPFAFIKPCG HG +
Sbjct: 183 EYLNVPPETETREVQRPVTRSSPNVIFKGRKSFSRPVSKLPSSIIYPFAFIKPCGVHGGM 242

Query: 96  TLKDINQRIRTPPPSKSKHHPEDPSLSYPTSAFSGKPVVGKTKIHTEGGKGSITIMRTKG 155
           TLKDINQ+IR  PP+K K H E+P++   TSAFSGKPVVGKTKI TEGGKGSITIMRT+G
Sbjct: 243 TLKDINQKIRN-PPAKPKAHIEEPAV-IQTSAFSGKPVVGKTKIRTEGGKGSITIMRTRG 300

[Close]

BLAST of Carg26389 vs. TrEMBL
Match: tr|A0A0A0LBN6|A0A0A0LBN6_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G628730 PE=4 SV=1)

HSP 1 Score: 232.3 bits (591), Expect = 7.6e-58
Identity = 110/120 (91.67%), Postives = 112/120 (93.33%), Query Frame = 0


Query: 36  EFCDVIPEFKSNAVQHHPTRTPRNIIFKGRKSYIRTPTKLASSIAYPFAFIKPCGFHGDV 95
           EFCD  PEFKSN VQHHPTR P NIIFKGRKSYIRTPTKLASS+AYPFAFIKPCGFHGDV
Sbjct: 185 EFCDGAPEFKSNVVQHHPTRAPPNIIFKGRKSYIRTPTKLASSVAYPFAFIKPCGFHGDV 244

Query: 96  TLKDINQRIRTPPPSKSKHHPEDPSLSYPTSAFSGKPVVGKTKIHTEGGKGSITIMRTKG 155
           TLKDINQRIRTPPPSK KH PEDPS SYPTSAFSGKPVVGKTKIHTEGGKGSITIMRT+G
Sbjct: 245 TLKDINQRIRTPPPSKLKHQPEDPSESYPTSAFSGKPVVGKTKIHTEGGKGSITIMRTRG 304

[Close]

BLAST of Carg26389 vs. TrEMBL
Match: tr|A0A1S3CH27|A0A1S3CH27_CUCME (protein XRI1 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103500376 PE=4 SV=1)

HSP 1 Score: 230.7 bits (587), Expect = 2.2e-57
Identity = 109/120 (90.83%), Postives = 111/120 (92.50%), Query Frame = 0


Query: 36  EFCDVIPEFKSNAVQHHPTRTPRNIIFKGRKSYIRTPTKLASSIAYPFAFIKPCGFHGDV 95
           EFCD  PEFKSN V HHPTR P NIIFKGRKSYIRTPTKLASS+AYPFAFIKPCGFHGDV
Sbjct: 186 EFCDGAPEFKSNVVHHHPTRAPPNIIFKGRKSYIRTPTKLASSVAYPFAFIKPCGFHGDV 245

Query: 96  TLKDINQRIRTPPPSKSKHHPEDPSLSYPTSAFSGKPVVGKTKIHTEGGKGSITIMRTKG 155
           TLKDINQRIRTPPPSK KH PEDPS SYPTSAFSGKPVVGKTKIHTEGGKGSITIMRT+G
Sbjct: 246 TLKDINQRIRTPPPSKLKHQPEDPSQSYPTSAFSGKPVVGKTKIHTEGGKGSITIMRTRG 305

[Close]

BLAST of Carg26389 vs. TrEMBL
Match: tr|A0A1S3CFL6|A0A1S3CFL6_CUCME (protein XRI1 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103500376 PE=4 SV=1)

HSP 1 Score: 230.7 bits (587), Expect = 2.2e-57
Identity = 109/120 (90.83%), Postives = 111/120 (92.50%), Query Frame = 0


Query: 36  EFCDVIPEFKSNAVQHHPTRTPRNIIFKGRKSYIRTPTKLASSIAYPFAFIKPCGFHGDV 95
           EFCD  PEFKSN V HHPTR P NIIFKGRKSYIRTPTKLASS+AYPFAFIKPCGFHGDV
Sbjct: 185 EFCDGAPEFKSNVVHHHPTRAPPNIIFKGRKSYIRTPTKLASSVAYPFAFIKPCGFHGDV 244

Query: 96  TLKDINQRIRTPPPSKSKHHPEDPSLSYPTSAFSGKPVVGKTKIHTEGGKGSITIMRTKG 155
           TLKDINQRIRTPPPSK KH PEDPS SYPTSAFSGKPVVGKTKIHTEGGKGSITIMRT+G
Sbjct: 245 TLKDINQRIRTPPPSKLKHQPEDPSQSYPTSAFSGKPVVGKTKIHTEGGKGSITIMRTRG 304

[Close]

BLAST of Carg26389 vs. TrEMBL
Match: tr|A5B5D7|A5B5D7_VITVI (Uncharacterized protein OS=Vitis vinifera OX=29760 GN=VITISV_010925 PE=4 SV=1)

HSP 1 Score: 204.5 bits (519), Expect = 1.7e-49
Identity = 99/135 (73.33%), Postives = 116/135 (85.93%), Query Frame = 0


Query: 21  VDLVMVDDISLFERVEFCDVIPEFKSNAVQHHPTRTPRNIIFKGRKSYIRTPTKLASSIA 80
           ++L  + D+ + +  EF ++  E+++N VQ   TRTP+N+IFKGRKSY+RTPTKLASS+A
Sbjct: 187 MNLSEISDVQI-DVTEFYNIPTEYEANTVQERATRTPQNVIFKGRKSYMRTPTKLASSVA 246

Query: 81  YPFAFIKPCGFHGDVTLKDINQRIRTPPPSKSKHHPEDPSLSYPTSAFSGKPVVGKTKIH 140
           YPFAFIKPCG HGDVTLKDINQRIRTPPPSKS+   EDPS+SYPTSAFSGKPVVGKTKI 
Sbjct: 247 YPFAFIKPCGVHGDVTLKDINQRIRTPPPSKSRQSNEDPSVSYPTSAFSGKPVVGKTKIR 306

Query: 141 TEGGKGSITIMRTKG 156
           TEGGKGSITIMRTKG
Sbjct: 307 TEGGKGSITIMRTKG 320

[Close]

BLAST of Carg26389 vs. TrEMBL
Match: tr|A0A1Q3BRT3|A0A1Q3BRT3_CEPFO (Uncharacterized protein OS=Cephalotus follicularis OX=3775 GN=CFOL_v3_14204 PE=4 SV=1)

HSP 1 Score: 202.6 bits (514), Expect = 6.4e-49
Identity = 98/128 (76.56%), Postives = 107/128 (83.59%), Query Frame = 0


Query: 28  DISLFERVEFCDVIPEFKSNAVQHHPTRTPRNIIFKGRKSYIRTPTKLASSIAYPFAFIK 87
           DIS  +   FC+V PE ++N VQ H  RTPRNIIFKGRKS+IRTPTK  SS+AYPFAF+K
Sbjct: 179 DISGRDECHFCNVTPEVEANTVQQHIPRTPRNIIFKGRKSFIRTPTKSPSSVAYPFAFVK 238

Query: 88  PCGFHGDVTLKDINQRIRTPPPSKSKHHPEDPSLSYPTSAFSGKPVVGKTKIHTEGGKGS 147
           PC FHGDVTLKDINQ+I TPPPSKSK   EDP+  YPTSAFSGKPVVGKTKI TEGGKGS
Sbjct: 239 PCTFHGDVTLKDINQKILTPPPSKSKESDEDPTAGYPTSAFSGKPVVGKTKIRTEGGKGS 298

Query: 148 ITIMRTKG 156
           ITIMRTKG
Sbjct: 299 ITIMRTKG 306

The following BLAST results are available for this feature:

BLAST of Carg26389 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022963649.1	1.8e-63	99.17	protein XRI1-like [Cucurbita moschata]	[more]
XP_023511506.1	1.8e-63	99.17	protein XRI1-like [Cucurbita pepo subsp. pepo]	[more]
XP_022967302.1	5.9e-62	97.50	protein XRI1-like [Cucurbita maxima]	[more]
XP_022159878.1	2.5e-60	94.17	protein XRI1 [Momordica charantia]	[more]
XP_022930895.1	2.7e-59	93.33	protein XRI1-like [Cucurbita moschata] >XP_023532484.1 protein XRI1-like [Cucurb...	[more]

BLAST of Carg26389 vs. TAIR10


Match Name	E-value	Identity	Description
AT5G48720.2	2.7e-37	65.83	x-ray induced transcript 1	[more]
AT2G01990.1	1.2e-11	45.35	unknown protein	[more]
AT1G14630.1	6.4e-10	45.68	unknown protein	[more]

BLAST of Carg26389 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|Q6NLW5\|XRI1_ARATH	4.9e-36	65.83	Protein XRI1 OS=Arabidopsis thaliana OX=3702 GN=XRI1 PE=1 SV=2	[more]

BLAST of Carg26389 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A0A0LBN6\|A0A0A0LBN6_CUCSA	7.6e-58	91.67	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G628730 PE=4 SV=1	[more]
tr\|A0A1S3CH27\|A0A1S3CH27_CUCME	2.2e-57	90.83	protein XRI1 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103500376 PE=4 SV=1	[more]
tr\|A0A1S3CFL6\|A0A1S3CFL6_CUCME	2.2e-57	90.83	protein XRI1 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103500376 PE=4 SV=1	[more]
tr\|A5B5D7\|A5B5D7_VITVI	1.7e-49	73.33	Uncharacterized protein OS=Vitis vinifera OX=29760 GN=VITISV_010925 PE=4 SV=1	[more]
tr\|A0A1Q3BRT3\|A0A1Q3BRT3_CEPFO	6.4e-49	76.56	Uncharacterized protein OS=Cephalotus follicularis OX=3775 GN=CFOL_v3_14204 PE=4...	[more]

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg26389-RA	Carg26389-RA	mRNA

InterPro

Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 103..155
None	No IPR available	PANTHER	PTHR33385	FAMILY NOT NAMED	coord: 26..155
None	No IPR available	PANTHER	PTHR33385:SF4	PROTEIN XRI1	coord: 26..155

Synteny

The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Carg26389	Wax gourd	carwgoB0380
Carg26389	Silver-seed gourd	carcarB323
Carg26389	Cucumber (Gy14) v2	carcgybB0306
Carg26389	Cucumber (Gy14) v1	carcgyB0342
Carg26389	Cucurbita maxima (Rimu)	carcmaB0403
Carg26389	Cucurbita maxima (Rimu)	carcmaB0404
Carg26389	Cucurbita moschata (Rifu)	carcmoB0399
Carg26389	Cucurbita moschata (Rifu)	carcmoB0400
Carg26389	Cucurbita pepo (Zucchini)	carcpeB0404
Carg26389	Cucurbita pepo (Zucchini)	carcpeB0405
Carg26389	Cucurbita pepo (Zucchini)	carcpeB0406
Carg26389	Wild cucumber (PI 183967)	carcpiB0325
Carg26389	Cucumber (Chinese Long) v2	carcuB0319
Carg26389	Cucumber (Chinese Long) v3	carcucB0325
Carg26389	Bottle gourd (USVL1VR-Ls)	carlsiB266
Carg26389	Watermelon (Charleston Gray)	carwcgB0284
Carg26389	Watermelon (97103) v1	carwmB0285
Carg26389	Watermelon (97103) v2	carwmbB0299