Carg26388 (gene) Silver-seed gourd
The following sequences are available for this feature:
Legend: exonfive_prime_UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.AGTTACTCGGTTAGTGGGCGCTTTTCTCCTTCTTCTCCGCCCCTAAGCCCCCATTATCTAGCACACCACAACTCAAACATCGGGGGACCGAACTGGATTTCTCTTCAAATGCTTCTTTTTTGATCGCAGTCAATAGCAGTTCACGAGTGTTGGTCTTGTTTTACTGTTCTAGCCATGGATGATTGCGCCAAAAACAAGTAAGATCGCTGTTCTTCTGCTCTATCTGTTTGTTTATGTGATTGGTTTGGTTTCTCCGTGTTTTTTTTTTGTGTTTTGGAAGATCTAGCTGTTCCTGTTGATTCCTTGTTTTGGGGGAAGCTGTTTTTTGGGGTTTTATTGTAATGGTTCTTCGATTTGTTCTGATTTTCTTGCGCTGTAATCGGTAATTTGAAGTCGAAATGGAGTGGAGGATGAGGCTGTTGGATTTAATTTAAGTAGCGGATCATTGACAGCTAATGACTTGTTATTATTGTTTATAGCGTTCTTGCAGTCTTCCGAGTTGTTTAATTATTGTGTTAATTTGTTGAGAAAATCCTCAAGAAGTATGGTTTAATTTGCTTCTTTCAGTAGTTTGACTTGCTTGGTTGAGATTGAATCAATTGTTTTCCATTTCTATTATGGTAATAAGCGTTGCATGTGCTTAATCTTTCACTTTTGTTGCTTTTATGTGTGATTTTATCAGTGATTCTTGGAATTGGGAAGGAGATGGGTATACCATTCAGAAGGATGCGGATTTAGGTGAGTAATTTTCTTGTTTACTTTGTTTGTTATGTGTTATATGTGAGATCCCACGTTAGTGGAAGAGAGGAACGAAACATTCCTTATAAGGGTGTGGAAACTTCTATCTAGTAGACGTGTTTTAAAACCTTGAGGGGAAGTCTGGAAGGGTAAGGTCAATGAGGACAATATCTGCTAGTGGTGAGCTTGAGTTGTTACATTATTGGTGAGATTCCACGTTAGTTGGAGAGAGGAACGAAGCATTCCTTATAAAGGTGTGGAAACCTCTCCCTAGTAGACGCGTTTTAAAACCTGGAGGGGAAGTTCGGAAGGGAATGCTCAAAGAGGATAATATCTGCTAATAATGCGCTTGAGTTGTTATATTCTCTGATCACATTGTGTTAAAATTCATCCTTGGGACCTTTTTTGTTTTCATTGTCATGAGTAGAGATATCAGAATTCCTGTGGGACGGGGTATCCGAAAATGGAAATCTTTCGTACGTGTTTGATGAAACAACTCCTGTTAAAGCTTGTGGGGACTTGGCATTCAATGTTTCATATAGTGGTAAGAACATTACACTTGATTTTAATCTAAGGGGTCGTTGGTTCTTTGTCATTTCTAATGTGGAGAAGTGGGTTTCAGATGACAGGAACAAGAAATCAGAAGAGTCCAGGGAGACTCAATCACAGGCAAAGAGACGTCGGATGTTACAGTTTACTGCACAAGATATGGAAACTTCCCTATGCAATGAAGATTTATCTTCTAGATTCCTAAAAGCACATGTAAGTGATATGCACTTCCTGGTGTATGGTTGTAAGAATTCGGATCGACTTCAGTCAAACATGTCAATTCTATAAGTTGTTCTATCTTATTGCTTGTAGTTGCAATAAGTTTGCTTTGCTTTTGATTGAGTTTGCTTGAAAGAATATATAACGTATTACATAGTTTAAGAGAGAGAATCAATCTTCAGTTGAGTAGTATGCTCGTTTCACGAGGTTCTACCATAGTAGGGTGCAATCATACTCAAAATCTGAGTTTGATCCTGGCTTAGAAGGGATGCTAGCTATATGCTTAACACATGAAAGTCGAATGTAGTTTAATAAAAACCTGTGCCAGCACCTCGGATGCAAAACGCTTCTTTATAGGAGAGTCAAGGGCGCTTCCGCGGGCGATTCTAAGTTGCTCCAAGGAGCTTATTGTCGATCTTTAGTGTTTGGGAGATATACTTTTAACAAGGAGTTCCGTTGATAGGAGCTCCTTTTCGAGCTTACGGTCCACTTTTTAAAAAATCAGGCTTCTCCTTTGTCTTTTATTTCAGCACTTGTTTGCTGTCGATCCTCTTAGATGCAAAAACTTAAGTTCTCTGCTATGATGTTAGACTTGTCGATAGATACAAGTATACTGTAGAACTTGTATGAAATTTGTTGTGGCCTTTTGTTCTATATCCAGAAGAAGGATGTTTCCGGTCCAGCTGCTCTCCCGGAAGCTTCATACGGGATTCCCGAGTGTTCTCAACTCTCAGGTTTGTCTCAAACACGATACTTTATACGGGATTCCCGAGTGCTCTTGGATTTGTCTAATCATATAATGTATTTGCCTTAGATAATGTGTCCACTTTCTGTCATGAGAATTTGGATCACTCACCTGAAGGTTGGATTGCTGAATGCTTTACTGATGCTGATATGCTTTGCAGCCCTGAGGATTTGTATGTGTCTTGTTTGCATCCGAATTGTTTTGCTTACAATTATTAA AGTTACTCGGTTAGTGGGCGCTTTTCTCCTTCTTCTCCGCCCCTAAGCCCCCATTATCTAGCACACCACAACTCAAACATCGGGGGACCGAACTGGATTTCTCTTCAAATGCTTCTTTTTTGATCGCAGTCAATAGCAGTTCACGAGTGTTGGTCTTGTTTTACTGTTCTAGCCATGGATGATTGCGCCAAAAACAAGAACAAGAAATCAGAAGAGTCCAGGGAGACTCAATCACAGGCAAAGAGACGTCGGATGTTACAGTTTACTGCACAAGATATGGAAACTTCCCTATGCAATGAAGATTTATCTTCTAGATTCCTAAAAGCACATAAGAAGGATGTTTCCGGTCCAGCTGCTCTCCCGGAAGCTTCATACGGGATTCCCGAGTGTTCTCAACTCTCAGATAATGTGTCCACTTTCTGTCATGAGAATTTGGATCACTCACCTGAAGGTTGGATTGCTGAATGCTTTACTGATGCTGATATGCTTTGCAGCCCTGAGGATTTGTATGTGTCTTGTTTGCATCCGAATTGTTTTGCTTACAATTATTAA ATGGATGATTGCGCCAAAAACAAGAACAAGAAATCAGAAGAGTCCAGGGAGACTCAATCACAGGCAAAGAGACGTCGGATGTTACAGTTTACTGCACAAGATATGGAAACTTCCCTATGCAATGAAGATTTATCTTCTAGATTCCTAAAAGCACATAAGAAGGATGTTTCCGGTCCAGCTGCTCTCCCGGAAGCTTCATACGGGATTCCCGAGTGTTCTCAACTCTCAGATAATGTGTCCACTTTCTGTCATGAGAATTTGGATCACTCACCTGAAGGTTGGATTGCTGAATGCTTTACTGATGCTGATATGCTTTGCAGCCCTGAGGATTTGTATGTGTCTTGTTTGCATCCGAATTGTTTTGCTTACAATTATTAA MDDCAKNKNKKSEESRETQSQAKRRRMLQFTAQDMETSLCNEDLSSRFLKAHKKDVSGPAALPEASYGIPECSQLSDNVSTFCHENLDHSPEGWIAECFTDADMLCSPEDLYVSCLHPNCFAYNY
BLAST of Carg26388 vs. NCBI nr
Match: XP_022963649.1 (protein XRI1-like [Cucurbita moschata]) HSP 1 Score: 209.1 bits (531), Expect = 8.4e-51 Identity = 102/105 (97.14%), Postives = 104/105 (99.05%), Query Frame = 0
BLAST of Carg26388 vs. NCBI nr
Match: XP_023511506.1 (protein XRI1-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 206.8 bits (525), Expect = 4.2e-50 Identity = 101/105 (96.19%), Postives = 103/105 (98.10%), Query Frame = 0
BLAST of Carg26388 vs. NCBI nr
Match: XP_022967302.1 (protein XRI1-like [Cucurbita maxima]) HSP 1 Score: 206.5 bits (524), Expect = 5.4e-50 Identity = 101/105 (96.19%), Postives = 103/105 (98.10%), Query Frame = 0
BLAST of Carg26388 vs. NCBI nr
Match: XP_008461885.1 (PREDICTED: protein XRI1 isoform X1 [Cucumis melo]) HSP 1 Score: 176.8 bits (447), Expect = 4.6e-41 Identity = 87/108 (80.56%), Postives = 93/108 (86.11%), Query Frame = 0
BLAST of Carg26388 vs. NCBI nr
Match: XP_008461886.1 (PREDICTED: protein XRI1 isoform X2 [Cucumis melo]) HSP 1 Score: 176.8 bits (447), Expect = 4.6e-41 Identity = 87/108 (80.56%), Postives = 93/108 (86.11%), Query Frame = 0
BLAST of Carg26388 vs. TrEMBL
Match: tr|A0A1S3CH27|A0A1S3CH27_CUCME (protein XRI1 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103500376 PE=4 SV=1) HSP 1 Score: 176.8 bits (447), Expect = 3.1e-41 Identity = 87/108 (80.56%), Postives = 93/108 (86.11%), Query Frame = 0
BLAST of Carg26388 vs. TrEMBL
Match: tr|A0A1S3CFL6|A0A1S3CFL6_CUCME (protein XRI1 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103500376 PE=4 SV=1) HSP 1 Score: 176.8 bits (447), Expect = 3.1e-41 Identity = 87/108 (80.56%), Postives = 93/108 (86.11%), Query Frame = 0
BLAST of Carg26388 vs. TrEMBL
Match: tr|A0A0A0LBN6|A0A0A0LBN6_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G628730 PE=4 SV=1) HSP 1 Score: 176.4 bits (446), Expect = 4.0e-41 Identity = 86/108 (79.63%), Postives = 93/108 (86.11%), Query Frame = 0
BLAST of Carg26388 vs. TrEMBL
Match: tr|W9S460|W9S460_9ROSA (Uncharacterized protein OS=Morus notabilis OX=981085 GN=L484_003040 PE=4 SV=1) HSP 1 Score: 93.6 bits (231), Expect = 3.4e-16 Identity = 50/103 (48.54%), Postives = 73/103 (70.87%), Query Frame = 0
BLAST of Carg26388 vs. TrEMBL
Match: tr|A0A1Q3BRT3|A0A1Q3BRT3_CEPFO (Uncharacterized protein OS=Cephalotus follicularis OX=3775 GN=CFOL_v3_14204 PE=4 SV=1) HSP 1 Score: 88.6 bits (218), Expect = 1.1e-14 Identity = 54/108 (50.00%), Postives = 72/108 (66.67%), Query Frame = 0
The following BLAST results are available for this feature:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene:
The following block(s) are covering this gene:
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