Carg26368 (gene) Silver-seed gourd | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Carg26368
Type	gene
Organism	Cucurbita argyrosperma (Silver-seed gourd)
Description	coiled-coil domain-containing protein 124
Location	Cucurbita_argyrosperma_scaffold_334 : 118952 .. 123105 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TTTGGGCAGCTGTTTTCCGTTCGCGTTATTTGAAGAACTCGGCGGAATCTTCGATTTCCTGCAATTCGATCGATCTTCATCGTCGTTGTCGATACGATATCAGAGCTCAAGAAGCAACGATGCCGAAGAAGATGGGCGTAAACAGCAAAGCTGAGGCGGCGAGAGCACGCAAGAATTCCGCTGAGACCGAGCGCAAGGAGCGGGAGACTCGGGAGAAGGCGGATCAGTACTGGCGTGAAGCTGAGGGTCCCAAGTCCCGTGCCGCCAAGAAGCGAGAGGATGAATCTGAGAAGCGTGCTGAGGCCGCTGCTCGCAAGGCGGAGGCACGCCGCTTGGCTGAACAGGAGGAGAAGGAATTGGAGAAAGCCATGAAGAAGCCTGACAAGAAGGCGAATAGGGTTTCGATTCCGGTCCCCAAGGTGACCGAAGTTCAATTGAGGAAGAACAAAGAGGTGGAGGAAGCGGAGCTTCAGAGGAAGGCCGAGGAGGCTAAGAAAAAGCTGAGCCGGACGGCGGAGGAGGAGGAGTATGAGAGGATGGTGCTGGTGAGCAATACCAATCGGGATGATTCTATTATCGAGGCCAGGACGGTAGAAGACGCGATTTCTCAGATATCTGTTGCGGACAATTTACCCGTGGATAGGCATCCAGAGCGACGGCTCAAGGCCTCATTTAAGGTGCGGCTGGTTTCCCTTGTTCTTACAATTTTAATATCGAAACGAATCCAGAACGTCTATATCACCTTGATTGTTTGTTGTCTCGCTCTTTGTTCCTTCTCGCCGTTTGTTAGTTTTGATGGTTTAATCCTATTTGTTAGAACTCGTGTTCATAACAATGAAATAGGAAAGTTTAGGATGTCTGGAAACGACATGTTGAACGGAAGACTGGGGCATAGAAGCTTATTATAGGATCAACTATGGTAGTATGAATGGTGGGCACATGTTATCTTGAGGCCTGCTGCAAATTTTTTAGCGAGTTATATTGTTGTAATCTATTGGAAATCGAAATCTAACAGAACAGCTTCTAAATTTTGAAATAGCTTCTTTAGGAGTAAGCATTATATCAATTATCTTTGTCACTCAGTATTACATAAGTTATCAACAGTTCAGGTAGCTTGACTTCTTGTGTTGCTGCTTCTCTTAGGATAGAATATGTCTACTGGTGAGTGATGCGAGGAGTTGGATTGATTCTGTGAAGGGAGTTAGTTTTTGTCGACTTCCCTTCACTCTTATTTGCTCTTGGATTGTGCTCTTTATACCCCGCTGTGAGATGCCACATCGGTTGGAGAGGGGAACGAAACATTTTTTATAAGAGTGTGGAAACCTCTCCCTAGAAGACGTGTTTTAAAAACCTTGAAGGGAAGCCCGAAAGGGAAAGCCCAAAGATGACAATATCTGTTAGTGGTGGGCTTGGGCTGTTACAAAGGGTATCAGAGCCAGACACTAAGCAGTGTGTCAGCGAAAACGCTGGTCCCCGAAGGGGGGTGGATTGTGAGATCCCACATCGATTGGAGAGAGGAACGATTGCCAGCAAGTACGCTGGGTTCCGAAGGGGGGTGAATTGTGAGATCCCACGTCAATTGGAAAGAGGAACGAGTGCCAGCGAGGACTCTGGGCCTCGAAGAGGGGTGGATTGTAAGATCTCTCATCGATTGCAGAGGGTAACGAAACATTATTTATAAGGGTGTGAAAATCTCTCCCTAACCGACGCATTTTAAAAACCTTGAGGCAAAGAGGATAATATCTGCCGGTGGGTTTGGGCTGTTACACCCCTCTTTGCACACACTTTATTTCTGATATCTTTGCATGCACTTTATTTCTGATATGATATTTGTCCATCTTCAGAATGTTTATGGTGATGGTACCTGTTGGTAACTTGTCTGGTTCTGATCTTTTAACATAGTTACTTGTGATCTCCCTGAGATGCTGTTTTTTCTTCTTAGCTTTTATGATAATGGCTTTTGTCTCCAACCAAAAAAATTTAATTTCTACACCTATGTTTTGGATTGACGGGCTTTCTGATGTTATCTCAGCTCCTATCATGTGGCAAGTAGAAATTAACCTGTTTCTACTCTTATGTTTTGGATAGACAGCCTTTTCTGATGCTTCTCAAATTTTATGACAGCTATCTAACATTTCAATATATTTTCACTGAATTTTCACTTGTATTCAATGCCTAATGTAAGATCCTACGTCAGTTGGAGAAGGGAACGAATCAATCTTATAAGGGTGTGGAAACCTGTCCCTAGTAGACGAGTTTTAAAACCTTAAGGGGAAGCCCTTGAAGGGAAAGCTCAAAGAAGACAATATCTGCTAGCGGTGGACTTGGGCTGTTACAAATGGTATCAAAGCTAGACAACGGGTGGTTGCCAGCGAGGACGCTGGGCCCCGAGGGGGGTGGATTATGAGATCCTACATCGGTTGGAGAGGGAAACGAAGCATTTCTTATAAGGGTGTGGAAACCTCTTCCTAGTACACGCATTTTAAAACCTTGAGGGGAAGCCCTTGAAGAGAAAGCCCAAAAAGGACAATATTTGATAGCGGTGAGCTTGGGTTGTTATACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTAATTTTTTTTAAATTTTTTATTTAAAGAATCATGTTAAATTATTTGTTCTTGTTTTAACAACTTGCCTTTTTCTGTTCATATCATCAACTAAATGCTTTGTTTCACATTTAAAAAAAAAAACTTGCCCCCTCCTGAGAAGTTCATAGATTATGGATCAACTATTTTGGATGGAGGTGAAGTGGTTAATTATTCATAAAATTTAGACCACAAGCTTTGGAAACATGAAACTCAGGATATTTTTCATCTAAATCTATTGCCTACCAACTCAATACTGCCAGTGAAAAACTCTTAACAATAATAATTAATGAATGTCATCGGGATATTTAGGAGCATATTAGTCATCAGCTTAGGAATTTATAGGTGGGAGATGGTTATAAGTAAGGTGAGAAGAAAAGCTGTGGTTTGTTCAGTTGTGTAAAAGCTCAAGCCCACCGCTAGCAGATATTGTCCTCTTTGGACTTTCTCTTGAGGTTTTTAAAACGTGTCTGCTAGGGAGAGGTTTCCACACCCTTATAAACAATGTTTCGTTATCCTCCCCAACCGATGTGGGATCTCACAATTTGAGTCTAGAGGGAGGTGTCCAAGTTCCTCGAGTTACCTAGGATATTGTATTCTACTTTTCTCTCCAAGTTTTCACTGCAATTTCAATTATTTGGTTCTTGTGGGAGTTGTTAGATCTTCGCAACAAACGTGGATCGTTGGACAGTTTTGTTGGAATTATACGAAATACCGAAAGGAAGAAGCGACTTCAGTTAAATTAAACCCATTTGAGGGGATAAAATTAAAACCCTGATGTTCCGTATAAAATAAAAATGTACTGTTACTGAGTTTTCTTTGCCCCTGGTGTTCTGATGATTAGGCTTTTGAAGAAGCTGAGCTCCCCAGGCTGAAGGAAGAGAAACCTGGTCTTACTCACAATCAGTACAAGGACATGATATGGAAGCTATGGAAGAAGTCTCCTGACAACCCTCTTAATCAGGTAGCTTTAACGTACAAGTTTTTTTAAAGAACATTATTCTGGCTCTCCTTCTTCCTTAGAACCGTGCATGCTTTTAAATTTTGTGGTGGTAGGTTGCAGCAGAGTGATTGGATCCATGTCCTTCAACAAGGGGCAGGCCGGACTATCCCTTGAGTTTTAAGTCTATTTGCTAAACTTCTGTCATAGTTCAAAATCTGACCAATTCCTTTTCAGTTCAGTTGTATCCTGGAATGTTTAGATTGATAATGGGTCTTCGTCTCTCTGTTGCATACTATGGCATGGGTCTCTCGTAAATGCATATAAATAGTTTTGGGTCCTGTGTTGTACAATAAGAATCAATATTATGACCTTGGTTCTGTTGCATTTGGTGCATAGGCATTTAAGTGAATCCTTGAGGTTGTAAGAAATGGTTTGGTTCGTTTCGATCTTACCTCGGAGATTCCGAAATATGGTACATTGGTTTAGAGGCTGCATTTTGGAAGTCATAAGGTTTTAAGAAATGGTTTAGTTTGTTTCGATCTTACCTCGGAGATTCCGAAATATGGTACATAGGTTTAGAGGCTGCATTTTGGAAGTCATAAAG

mRNA sequence

TTTGGGCAGCTGTTTTCCGTTCGCGTTATTTGAAGAACTCGGCGGAATCTTCGATTTCCTGCAATTCGATCGATCTTCATCGTCGTTGTCGATACGATATCAGAGCTCAAGAAGCAACGATGCCGAAGAAGATGGGCGTAAACAGCAAAGCTGAGGCGGCGAGAGCACGCAAGAATTCCGCTGAGACCGAGCGCAAGGAGCGGGAGACTCGGGAGAAGGCGGATCAGTACTGGCGTGAAGCTGAGGGTCCCAAGTCCCGTGCCGCCAAGAAGCGAGAGGATGAATCTGAGAAGCGTGCTGAGGCCGCTGCTCGCAAGGCGGAGGCACGCCGCTTGGCTGAACAGGAGGAGAAGGAATTGGAGAAAGCCATGAAGAAGCCTGACAAGAAGGCGAATAGGGTTTCGATTCCGGTCCCCAAGGTGACCGAAGTTCAATTGAGGAAGAACAAAGAGGTGGAGGAAGCGGAGCTTCAGAGGAAGGCCGAGGAGGCTAAGAAAAAGCTGAGCCGGACGGCGGAGGAGGAGGAGTATGAGAGGATGGTGCTGGTGAGCAATACCAATCGGGATGATTCTATTATCGAGGCCAGGACGGTAGAAGACGCGATTTCTCAGATATCTGTTGCGGACAATTTACCCGTGGATAGGCATCCAGAGCGACGGCTCAAGGCCTCATTTAAGGCTTTTGAAGAAGCTGAGCTCCCCAGGCTGAAGGAAGAGAAACCTGGTCTTACTCACAATCAGTACAAGGACATGATATGGAAGCTATGGAAGAAGTCTCCTGACAACCCTCTTAATCAGGTTGCAGCAGAGTGATTGGATCCATGTCCTTCAACAAGGGGCAGGCCGGACTATCCCTTGAGTTTTAAGTCTATTTGCTAAACTTCTGTCATAGTTCAAAATCTGACCAATTCCTTTTCAGTTCAGTTGTATCCTGGAATGTTTAGATTGATAATGGGTCTTCGTCTCTCTGTTGCATACTATGGCATGGGTCTCTCGTAAATGCATATAAATAGTTTTGGGTCCTGTGTTGTACAATAAGAATCAATATTATGACCTTGGTTCTGTTGCATTTGGTGCATAGGCATTTAAGTGAATCCTTGAGGTTGTAAGAAATGGTTTGGTTCGTTTCGATCTTACCTCGGAGATTCCGAAATATGGTACATTGGTTTAGAGGCTGCATTTTGGAAGTCATAAGGTTTTAAGAAATGGTTTAGTTTGTTTCGATCTTACCTCGGAGATTCCGAAATATGGTACATAGGTTTAGAGGCTGCATTTTGGAAGTCATAAAG

Coding sequence (CDS)

ATGCCGAAGAAGATGGGCGTAAACAGCAAAGCTGAGGCGGCGAGAGCACGCAAGAATTCCGCTGAGACCGAGCGCAAGGAGCGGGAGACTCGGGAGAAGGCGGATCAGTACTGGCGTGAAGCTGAGGGTCCCAAGTCCCGTGCCGCCAAGAAGCGAGAGGATGAATCTGAGAAGCGTGCTGAGGCCGCTGCTCGCAAGGCGGAGGCACGCCGCTTGGCTGAACAGGAGGAGAAGGAATTGGAGAAAGCCATGAAGAAGCCTGACAAGAAGGCGAATAGGGTTTCGATTCCGGTCCCCAAGGTGACCGAAGTTCAATTGAGGAAGAACAAAGAGGTGGAGGAAGCGGAGCTTCAGAGGAAGGCCGAGGAGGCTAAGAAAAAGCTGAGCCGGACGGCGGAGGAGGAGGAGTATGAGAGGATGGTGCTGGTGAGCAATACCAATCGGGATGATTCTATTATCGAGGCCAGGACGGTAGAAGACGCGATTTCTCAGATATCTGTTGCGGACAATTTACCCGTGGATAGGCATCCAGAGCGACGGCTCAAGGCCTCATTTAAGGCTTTTGAAGAAGCTGAGCTCCCCAGGCTGAAGGAAGAGAAACCTGGTCTTACTCACAATCAGTACAAGGACATGATATGGAAGCTATGGAAGAAGTCTCCTGACAACCCTCTTAATCAGGTTGCAGCAGAGTGA

Protein sequence

MPKKMGVNSKAEAARARKNSAETERKERETREKADQYWREAEGPKSRAAKKREDESEKRAEAAARKAEARRLAEQEEKELEKAMKKPDKKANRVSIPVPKVTEVQLRKNKEVEEAELQRKAEEAKKKLSRTAEEEEYERMVLVSNTNRDDSIIEARTVEDAISQISVADNLPVDRHPERRLKASFKAFEEAELPRLKEEKPGLTHNQYKDMIWKLWKKSPDNPLNQVAAE

Homology

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BLAST of Carg26368 vs. NCBI nr
Match: XP_022928519.1 (coiled-coil domain-containing protein 124-like [Cucurbita moschata])

HSP 1 Score: 226.1 bits (575), Expect = 1.2e-55
Identity = 229/230 (99.57%), Postives = 229/230 (99.57%), Query Frame = 0


Query: 1   MPKKMGVNSKAEAARARKNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 60
           MPKKMGVNSKAEAARARKNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 1   MPKKMGVNSKAEAARARKNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 60

Query: 61  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXANRVSIPVPKVTEVQLRKNKXXXXXXXXXX 120
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXANRVSIPVPKVTEVQLRKNK XXXXXXXXX
Sbjct: 61  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXANRVSIPVPKVTEVQLRKNKEXXXXXXXXX 120

Query: 121 XXXXXXXXXXXXXXXXYERMVLVSNTNRDDSIIEARTVEDAISQISVADNLPVDRHPERR 180
           XXXXXXXXXXXXXXXXYERMVLVSNTNRDDSIIEARTVEDAISQISVADNLPVDRHPERR
Sbjct: 121 XXXXXXXXXXXXXXXXYERMVLVSNTNRDDSIIEARTVEDAISQISVADNLPVDRHPERR 180

Query: 181 LKASFKAFEEAELPRLKEEKPGLTHNQYKDMIWKLWKKSPDNPLNQVAAE 231
           LKASFKAFEEAELPRLKEEKPGLTHNQYKDMIWKLWKKSPDNPLNQVAAE
Sbjct: 181 LKASFKAFEEAELPRLKEEKPGLTHNQYKDMIWKLWKKSPDNPLNQVAAE 230

[Close]

BLAST of Carg26368 vs. NCBI nr
Match: XP_022989461.1 (coiled-coil domain-containing protein 124-like [Cucurbita maxima])

HSP 1 Score: 226.1 bits (575), Expect = 1.2e-55
Identity = 229/230 (99.57%), Postives = 229/230 (99.57%), Query Frame = 0


Query: 1   MPKKMGVNSKAEAARARKNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 60
           MPKKMGVNSKAEAARARKNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 1   MPKKMGVNSKAEAARARKNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 60

Query: 61  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXANRVSIPVPKVTEVQLRKNKXXXXXXXXXX 120
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXANRVSIPVPKVTEVQLRKNKXXXXXXXXXX
Sbjct: 61  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXANRVSIPVPKVTEVQLRKNKXXXXXXXXXX 120

Query: 121 XXXXXXXXXXXXXXXXYERMVLVSNTNRDDSIIEARTVEDAISQISVADNLPVDRHPERR 180
           XXXXXXXXXXXXXXX YERMVLVSNTNRDDSIIEARTVEDAISQISVADNLPVDRHPERR
Sbjct: 121 XXXXXXXXXXXXXXXEYERMVLVSNTNRDDSIIEARTVEDAISQISVADNLPVDRHPERR 180

Query: 181 LKASFKAFEEAELPRLKEEKPGLTHNQYKDMIWKLWKKSPDNPLNQVAAE 231
           LKASFKAFEEAELPRLKEEKPGLTHNQYKDMIWKLWKKSPDNPLNQVAAE
Sbjct: 181 LKASFKAFEEAELPRLKEEKPGLTHNQYKDMIWKLWKKSPDNPLNQVAAE 230

[Close]

BLAST of Carg26368 vs. NCBI nr
Match: XP_023529785.1 (coiled-coil domain-containing protein 124-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 226.1 bits (575), Expect = 1.2e-55
Identity = 215/230 (93.48%), Postives = 215/230 (93.48%), Query Frame = 0


Query: 1   MPKKMGVNSKAEAARARKNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 60
           MPKKMGVNSKAEAARARKN        XXXXXXX       XXXXXXXXXXXXXXXXXXX
Sbjct: 1   MPKKMGVNSKAEAARARKNSAETDRKEXXXXXXXDQYWREAXXXXXXXXXXXXXXXXXXX 60

Query: 61  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXANRVSIPVPKVTEVQLRKNKXXXXXXXXXX 120
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXANRVSIPVPKVTEVQLRKNKXXXXXXXXXX
Sbjct: 61  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXANRVSIPVPKVTEVQLRKNKXXXXXXXXXX 120

Query: 121 XXXXXXXXXXXXXXXXYERMVLVSNTNRDDSIIEARTVEDAISQISVADNLPVDRHPERR 180
           XXXXXXXXXXXXXXXXYERMVLVSNTNRDDSIIEARTVEDAISQISVADNLPVDRHPERR
Sbjct: 121 XXXXXXXXXXXXXXXXYERMVLVSNTNRDDSIIEARTVEDAISQISVADNLPVDRHPERR 180

Query: 181 LKASFKAFEEAELPRLKEEKPGLTHNQYKDMIWKLWKKSPDNPLNQVAAE 231
           LKASFKAFEEAELPRLKEEKPGLTHNQYKDMIWKLWKKSPDNPLNQVAAE
Sbjct: 181 LKASFKAFEEAELPRLKEEKPGLTHNQYKDMIWKLWKKSPDNPLNQVAAE 230

[Close]

BLAST of Carg26368 vs. NCBI nr
Match: XP_004144873.1 (PREDICTED: coiled-coil domain-containing protein 124 [Cucumis sativus] >KGN43292.1 hypothetical protein Csa_7G018740 [Cucumis sativus])

HSP 1 Score: 206.8 bits (525), Expect = 7.7e-50
Identity = 215/230 (93.48%), Postives = 222/230 (96.52%), Query Frame = 0


Query: 1   MPKKMGVNSKAEAARARKNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 60
           MPKKMGVNSKAEAARARK+XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 1   MPKKMGVNSKAEAARARKSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 60

Query: 61  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXANRVSIPVPKVTEVQLRKNKXXXXXXXXXX 120
           XXXXXXXXXXXXXXXXXXXXXXXXXXXX  A+RV+IPVPKVTE++L    XXXXXXXXXX
Sbjct: 61  XXXXXXXXXXXXXXXXXXXXXXXXXXXXKKASRVTIPVPKVTELELXXXXXXXXXXXXXX 120

Query: 121 XXXXXXXXXXXXXXXXYERMVLVSNTNRDDSIIEARTVEDAISQISVADNLPVDRHPERR 180
           XXXXXXXXXXXXXX  YERMVLV+NTNRDDSIIEARTVEDAI+QISVADNLPVDRHPERR
Sbjct: 121 XXXXXXXXXXXXXXEEYERMVLVTNTNRDDSIIEARTVEDAIAQISVADNLPVDRHPERR 180

Query: 181 LKASFKAFEEAELPRLKEEKPGLTHNQYKDMIWKLWKKSPDNPLNQVAAE 231
           LKASFKAFEEAELPRLKEEKPGLTHNQYKDMIWKLWKKSPDNPLNQVAAE
Sbjct: 181 LKASFKAFEEAELPRLKEEKPGLTHNQYKDMIWKLWKKSPDNPLNQVAAE 230

[Close]

BLAST of Carg26368 vs. NCBI nr
Match: XP_008447903.1 (PREDICTED: coiled-coil domain-containing protein 124 [Cucumis melo])

HSP 1 Score: 206.8 bits (525), Expect = 7.7e-50
Identity = 200/230 (86.96%), Postives = 207/230 (90.00%), Query Frame = 0


Query: 1   MPKKMGVNSKAEAARARKNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 60
           MPKKMGVNSKAEAARARK+        XXXXXXX         XXXXXXXXXXXXXXXXX
Sbjct: 1   MPKKMGVNSKAEAARARKSAVETERKEXXXXXXXDQFWREAEGXXXXXXXXXXXXXXXXX 60

Query: 61  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXANRVSIPVPKVTEVQLRKNKXXXXXXXXXX 120
           XXXXXXXXXXXXXXXXXXXXXXXXXXXX  A+RV+IPVPKVTE++L    XXXXXXXXXX
Sbjct: 61  XXXXXXXXXXXXXXXXXXXXXXXXXXXXKKASRVAIPVPKVTELELXXXXXXXXXXXXXX 120

Query: 121 XXXXXXXXXXXXXXXXYERMVLVSNTNRDDSIIEARTVEDAISQISVADNLPVDRHPERR 180
           XXXXXXXXXXXXXXXXYERMVLV+NTNRDDSIIEARTVEDAI+QISVADNLPVDRHPERR
Sbjct: 121 XXXXXXXXXXXXXXXXYERMVLVTNTNRDDSIIEARTVEDAIAQISVADNLPVDRHPERR 180

Query: 181 LKASFKAFEEAELPRLKEEKPGLTHNQYKDMIWKLWKKSPDNPLNQVAAE 231
           LKASFKAFEEAELPRLKEEKPGLTHNQYKDMIWKLWKKSPDNPLNQVAAE
Sbjct: 181 LKASFKAFEEAELPRLKEEKPGLTHNQYKDMIWKLWKKSPDNPLNQVAAE 230

[Close]

BLAST of Carg26368 vs. TAIR10
Match: AT1G16210.1 (unknown protein)

HSP 1 Score: 163.3 bits (412), Expect = 1.8e-40
Identity = 74/93 (79.57%), Postives = 88/93 (94.62%), Query Frame = 0


Query: 137 YERMVLVSNTNRDDSIIEARTVEDAISQISVADNLPVDRHPERRLKASFKAFEEAELPRL 196
           YE+MVLV+NTNRDDS+IEA TV++A+++I+V+DNLPVDRHPE+RLKASFKA+EE ELPRL
Sbjct: 137 YEKMVLVTNTNRDDSLIEAHTVDEALARITVSDNLPVDRHPEKRLKASFKAYEEVELPRL 196

Query: 197 KEEKPGLTHNQYKDMIWKLWKKSPDNPLNQVAA 230
           K EKPGLTH QYKD+IWK+WKKSPDNPLNQ AA
Sbjct: 197 KSEKPGLTHTQYKDLIWKMWKKSPDNPLNQAAA 229

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BLAST of Carg26368 vs. Swiss-Prot
Match: sp|Q2TBV6|CC124_BOVIN (Coiled-coil domain-containing protein 124 OS=Bos taurus OX=9913 GN=CCDC124 PE=2 SV=1)

HSP 1 Score: 94.4 bits (233), Expect = 1.8e-18
Identity = 48/90 (53.33%), Postives = 66/90 (73.33%), Query Frame = 0


Query: 142 LVSNTNR---DDSIIEARTVEDAISQISVADNLPVDRHPERRLKASFKAFEEAELPRLKE 201
           L  N NR   ++  +EART+EDAI+ +SV +   VDRHPERR++A++ AFEEA+LPRLK+
Sbjct: 128 LEENVNRRVLEEGSVEARTIEDAIAVLSVTEE-AVDRHPERRMRAAYTAFEEAQLPRLKQ 187

Query: 202 EKPGLTHNQYKDMIWKLWKKSPDNPLNQVA 229
           E P +  +Q K M+ K W +SPDNP+NQ A
Sbjct: 188 ENPNMRLSQLKQMLKKEWLRSPDNPMNQRA 216

[Close]

BLAST of Carg26368 vs. Swiss-Prot
Match: sp|Q96CT7|CC124_HUMAN (Coiled-coil domain-containing protein 124 OS=Homo sapiens OX=9606 GN=CCDC124 PE=1 SV=1)

HSP 1 Score: 94.4 bits (233), Expect = 1.8e-18
Identity = 48/90 (53.33%), Postives = 66/90 (73.33%), Query Frame = 0


Query: 142 LVSNTNR---DDSIIEARTVEDAISQISVADNLPVDRHPERRLKASFKAFEEAELPRLKE 201
           L  N NR   ++  +EART+EDAI+ +SVA+    DRHPERR++A+F AFEEA+LPRLK+
Sbjct: 128 LEENVNRRVLEEGSVEARTIEDAIAVLSVAEE-AADRHPERRMRAAFTAFEEAQLPRLKQ 187

Query: 202 EKPGLTHNQYKDMIWKLWKKSPDNPLNQVA 229
           E P +  +Q K ++ K W +SPDNP+NQ A
Sbjct: 188 ENPNMRLSQLKQLLKKEWLRSPDNPMNQRA 216

[Close]

BLAST of Carg26368 vs. Swiss-Prot
Match: sp|Q9D8X2|CC124_MOUSE (Coiled-coil domain-containing protein 124 OS=Mus musculus OX=10090 GN=Ccdc124 PE=1 SV=1)

HSP 1 Score: 92.8 bits (229), Expect = 5.3e-18
Identity = 48/90 (53.33%), Postives = 65/90 (72.22%), Query Frame = 0


Query: 142 LVSNTNR---DDSIIEARTVEDAISQISVADNLPVDRHPERRLKASFKAFEEAELPRLKE 201
           L  N NR   ++  +EARTVEDAI+ +SVA+    DRHPERR++A+F AFEE +LPRLK+
Sbjct: 123 LEENLNRRLQEEGSVEARTVEDAIAVLSVAEE--ADRHPERRMRAAFTAFEEVQLPRLKQ 182

Query: 202 EKPGLTHNQYKDMIWKLWKKSPDNPLNQVA 229
           E P +  +Q K ++ K W +SPDNP+NQ A
Sbjct: 183 ENPNMRLSQLKQLLKKEWLRSPDNPMNQRA 210

[Close]

BLAST of Carg26368 vs. Swiss-Prot
Match: sp|Q5R8X8|CC124_PONAB (Coiled-coil domain-containing protein 124 OS=Pongo abelii OX=9601 GN=CCDC124 PE=2 SV=1)

HSP 1 Score: 92.8 bits (229), Expect = 5.3e-18
Identity = 48/90 (53.33%), Postives = 65/90 (72.22%), Query Frame = 0


Query: 142 LVSNTNR---DDSIIEARTVEDAISQISVADNLPVDRHPERRLKASFKAFEEAELPRLKE 201
           L  N NR   ++  +EART+EDAI+ +SVA+    DRHPERR +A+F AFEEA+LPRLK+
Sbjct: 128 LEENVNRRVLEEGSVEARTIEDAIAVLSVAEE-AADRHPERRQRAAFTAFEEAQLPRLKQ 187

Query: 202 EKPGLTHNQYKDMIWKLWKKSPDNPLNQVA 229
           E P +  +Q K ++ K W +SPDNP+NQ A
Sbjct: 188 ENPNMRLSQLKQLLKKEWLRSPDNPMNQRA 216

[Close]

BLAST of Carg26368 vs. Swiss-Prot
Match: sp|Q6PHE8|CC124_DANRE (Coiled-coil domain-containing protein 124 OS=Danio rerio OX=7955 GN=ccdc124 PE=2 SV=1)

HSP 1 Score: 90.9 bits (224), Expect = 2.0e-17
Identity = 47/91 (51.65%), Postives = 64/91 (70.33%), Query Frame = 0


Query: 142 LVSNTNR---DDSIIEARTVEDAISQISVADNLPVDRHPERRLKASFKAFEEAELPRLKE 201
           L  N NR   ++  +EART+EDAI+ +S  ++L  DRHPERR+KA++ AFEEA +PR+K 
Sbjct: 123 LEENVNRIVPEEGTVEARTIEDAIAVLSTKEDL--DRHPERRMKAAYTAFEEANMPRVKM 182

Query: 202 EKPGLTHNQYKDMIWKLWKKSPDNPLNQVAA 230
           E P +  +Q K  + K W KSP+NPLNQ AA
Sbjct: 183 ENPNMRLSQLKQQLKKEWTKSPENPLNQRAA 211

[Close]

BLAST of Carg26368 vs. TrEMBL
Match: tr|A0A1S3BJ47|A0A1S3BJ47_CUCME (coiled-coil domain-containing protein 124 OS=Cucumis melo OX=3656 GN=LOC103490249 PE=4 SV=1)

HSP 1 Score: 206.8 bits (525), Expect = 5.1e-50
Identity = 200/230 (86.96%), Postives = 207/230 (90.00%), Query Frame = 0


Query: 1   MPKKMGVNSKAEAARARKNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 60
           MPKKMGVNSKAEAARARK+        XXXXXXX         XXXXXXXXXXXXXXXXX
Sbjct: 1   MPKKMGVNSKAEAARARKSAVETERKEXXXXXXXDQFWREAEGXXXXXXXXXXXXXXXXX 60

Query: 61  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXANRVSIPVPKVTEVQLRKNKXXXXXXXXXX 120
           XXXXXXXXXXXXXXXXXXXXXXXXXXXX  A+RV+IPVPKVTE++L    XXXXXXXXXX
Sbjct: 61  XXXXXXXXXXXXXXXXXXXXXXXXXXXXKKASRVAIPVPKVTELELXXXXXXXXXXXXXX 120

Query: 121 XXXXXXXXXXXXXXXXYERMVLVSNTNRDDSIIEARTVEDAISQISVADNLPVDRHPERR 180
           XXXXXXXXXXXXXXXXYERMVLV+NTNRDDSIIEARTVEDAI+QISVADNLPVDRHPERR
Sbjct: 121 XXXXXXXXXXXXXXXXYERMVLVTNTNRDDSIIEARTVEDAIAQISVADNLPVDRHPERR 180

Query: 181 LKASFKAFEEAELPRLKEEKPGLTHNQYKDMIWKLWKKSPDNPLNQVAAE 231
           LKASFKAFEEAELPRLKEEKPGLTHNQYKDMIWKLWKKSPDNPLNQVAAE
Sbjct: 181 LKASFKAFEEAELPRLKEEKPGLTHNQYKDMIWKLWKKSPDNPLNQVAAE 230

[Close]

BLAST of Carg26368 vs. TrEMBL
Match: tr|A0A0A0K4S7|A0A0A0K4S7_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G018740 PE=4 SV=1)

HSP 1 Score: 206.8 bits (525), Expect = 5.1e-50
Identity = 215/230 (93.48%), Postives = 222/230 (96.52%), Query Frame = 0


Query: 1   MPKKMGVNSKAEAARARKNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 60
           MPKKMGVNSKAEAARARK+XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 1   MPKKMGVNSKAEAARARKSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 60

Query: 61  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXANRVSIPVPKVTEVQLRKNKXXXXXXXXXX 120
           XXXXXXXXXXXXXXXXXXXXXXXXXXXX  A+RV+IPVPKVTE++L    XXXXXXXXXX
Sbjct: 61  XXXXXXXXXXXXXXXXXXXXXXXXXXXXKKASRVTIPVPKVTELELXXXXXXXXXXXXXX 120

Query: 121 XXXXXXXXXXXXXXXXYERMVLVSNTNRDDSIIEARTVEDAISQISVADNLPVDRHPERR 180
           XXXXXXXXXXXXXX  YERMVLV+NTNRDDSIIEARTVEDAI+QISVADNLPVDRHPERR
Sbjct: 121 XXXXXXXXXXXXXXEEYERMVLVTNTNRDDSIIEARTVEDAIAQISVADNLPVDRHPERR 180

Query: 181 LKASFKAFEEAELPRLKEEKPGLTHNQYKDMIWKLWKKSPDNPLNQVAAE 231
           LKASFKAFEEAELPRLKEEKPGLTHNQYKDMIWKLWKKSPDNPLNQVAAE
Sbjct: 181 LKASFKAFEEAELPRLKEEKPGLTHNQYKDMIWKLWKKSPDNPLNQVAAE 230

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BLAST of Carg26368 vs. TrEMBL
Match: tr|V4SFG1|V4SFG1_9ROSI (Uncharacterized protein OS=Citrus clementina OX=85681 GN=CICLE_v10029213mg PE=4 SV=1)

HSP 1 Score: 197.2 bits (500), Expect = 4.0e-47
Identity = 205/227 (90.31%), Postives = 215/227 (94.71%), Query Frame = 0


Query: 1   MPKKMGVNSKAEAARARKNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 60
           MPKKMGVNSKAE ARARK+  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 1   MPKKMGVNSKAEEARARKSATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 60

Query: 61  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXANRVSIPVPKVTEVQLRKNKXXXXXXXXXX 120
           XXXXXXXXXXXXXXXXXXXXXXXXXXX   ANRVSIPVPKVTE  LRK + XXXXXXXXX
Sbjct: 61  XXXXXXXXXXXXXXXXXXXXXXXXXXXDKKANRVSIPVPKVTEADLRKRREXXXXXXXXX 120

Query: 121 XXXXXXXXXXXXXXXXYERMVLVSNTNRDDSIIEARTVEDAISQISVADNLPVDRHPERR 180
           XXXXXXXXXXXXXXXXYERMVLV+NTNRD+SIIEAR+VE+A+ ++ VADNLPVDRHPERR
Sbjct: 121 XXXXXXXXXXXXXXXXYERMVLVTNTNRDESIIEARSVEEALDKMKVADNLPVDRHPERR 180

Query: 181 LKASFKAFEEAELPRLKEEKPGLTHNQYKDMIWKLWKKSPDNPLNQV 228
           LKASFKAFEEAELPRLKEEKPGLTHNQYKDMIWKLWKKSPDNPLNQ+
Sbjct: 181 LKASFKAFEEAELPRLKEEKPGLTHNQYKDMIWKLWKKSPDNPLNQI 227

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BLAST of Carg26368 vs. TrEMBL
Match: tr|A0A067FLH0|A0A067FLH0_CITSI (Uncharacterized protein OS=Citrus sinensis OX=2711 GN=CISIN_1g027000mg PE=4 SV=1)

HSP 1 Score: 197.2 bits (500), Expect = 4.0e-47
Identity = 205/227 (90.31%), Postives = 215/227 (94.71%), Query Frame = 0


Query: 1   MPKKMGVNSKAEAARARKNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 60
           MPKKMGVNSKAE ARARK+  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 1   MPKKMGVNSKAEEARARKSATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 60

Query: 61  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXANRVSIPVPKVTEVQLRKNKXXXXXXXXXX 120
           XXXXXXXXXXXXXXXXXXXXXXXXXXX   ANRVSIPVPKVTE  LRK + XXXXXXXXX
Sbjct: 61  XXXXXXXXXXXXXXXXXXXXXXXXXXXDKKANRVSIPVPKVTEADLRKRREXXXXXXXXX 120

Query: 121 XXXXXXXXXXXXXXXXYERMVLVSNTNRDDSIIEARTVEDAISQISVADNLPVDRHPERR 180
           XXXXXXXXXXXXXXXXYERMVLV+NTNRD+SIIEAR+VE+A+ ++ VADNLPVDRHPERR
Sbjct: 121 XXXXXXXXXXXXXXXXYERMVLVTNTNRDESIIEARSVEEALDKMKVADNLPVDRHPERR 180

Query: 181 LKASFKAFEEAELPRLKEEKPGLTHNQYKDMIWKLWKKSPDNPLNQV 228
           LKASFKAFEEAELPRLKEEKPGLTHNQYKDMIWKLWKKSPDNPLNQ+
Sbjct: 181 LKASFKAFEEAELPRLKEEKPGLTHNQYKDMIWKLWKKSPDNPLNQI 227

[Close]

BLAST of Carg26368 vs. TrEMBL
Match: tr|A0A2H5P143|A0A2H5P143_CITUN (Uncharacterized protein OS=Citrus unshiu OX=55188 GN=CUMW_094280 PE=4 SV=1)

HSP 1 Score: 191.4 bits (485), Expect = 2.2e-45
Identity = 205/228 (89.91%), Postives = 214/228 (93.86%), Query Frame = 0


Query: 1   MPKKMGVNSKAEAARARKNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 60
           MPKKMGVNSKAE ARARK+  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 1   MPKKMGVNSKAEEARARKSATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 60

Query: 61  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXANRVSIPVPKVTEVQLRKNKXXXXXXXXXX 120
           XXXXXXXXXXXXXXXXXXXXXXXXXXX   ANRVSIPVPKVTE  LRK  XXXXXXXXXX
Sbjct: 61  XXXXXXXXXXXXXXXXXXXXXXXXXXXDKKANRVSIPVPKVTEADLRKRXXXXXXXXXXX 120

Query: 121 XXXXXXXXXXXXXXXXYERMVLVSNTNRDDSIIEARTVEDAISQISVADNLPVDRHPERR 180
           XXXXXXXXXXXXXXXX  RMVLV+NTNRD+SIIEAR+VE+A+ ++ VADNLPVDRHPERR
Sbjct: 121 XXXXXXXXXXXXXXXXXXRMVLVTNTNRDESIIEARSVEEALDKMKVADNLPVDRHPERR 180

Query: 181 LKASFKAFEEAELPRLKEEKPGLTHNQYKDMIWKLWKKSPDNPLNQVA 229
           LKASFKAFEEAELPRLKEEKPGLTHNQYKDMIWKLWKKSPDNPLNQV+
Sbjct: 181 LKASFKAFEEAELPRLKEEKPGLTHNQYKDMIWKLWKKSPDNPLNQVS 228

The following BLAST results are available for this feature:

BLAST of Carg26368 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022928519.1	1.2e-55	99.57	coiled-coil domain-containing protein 124-like [Cucurbita moschata]	[more]
XP_022989461.1	1.2e-55	99.57	coiled-coil domain-containing protein 124-like [Cucurbita maxima]	[more]
XP_023529785.1	1.2e-55	93.48	coiled-coil domain-containing protein 124-like [Cucurbita pepo subsp. pepo]	[more]
XP_004144873.1	7.7e-50	93.48	PREDICTED: coiled-coil domain-containing protein 124 [Cucumis sativus] >KGN43292...	[more]
XP_008447903.1	7.7e-50	86.96	PREDICTED: coiled-coil domain-containing protein 124 [Cucumis melo]	[more]

BLAST of Carg26368 vs. TAIR10


Match Name	E-value	Identity	Description
AT1G16210.1	1.8e-40	79.57	unknown protein	[more]

BLAST of Carg26368 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|Q2TBV6\|CC124_BOVIN	1.8e-18	53.33	Coiled-coil domain-containing protein 124 OS=Bos taurus OX=9913 GN=CCDC124 PE=2 ...	[more]
sp\|Q96CT7\|CC124_HUMAN	1.8e-18	53.33	Coiled-coil domain-containing protein 124 OS=Homo sapiens OX=9606 GN=CCDC124 PE=...	[more]
sp\|Q9D8X2\|CC124_MOUSE	5.3e-18	53.33	Coiled-coil domain-containing protein 124 OS=Mus musculus OX=10090 GN=Ccdc124 PE...	[more]
sp\|Q5R8X8\|CC124_PONAB	5.3e-18	53.33	Coiled-coil domain-containing protein 124 OS=Pongo abelii OX=9601 GN=CCDC124 PE=...	[more]
sp\|Q6PHE8\|CC124_DANRE	2.0e-17	51.65	Coiled-coil domain-containing protein 124 OS=Danio rerio OX=7955 GN=ccdc124 PE=2...	[more]

BLAST of Carg26368 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A1S3BJ47\|A0A1S3BJ47_CUCME	5.1e-50	86.96	coiled-coil domain-containing protein 124 OS=Cucumis melo OX=3656 GN=LOC10349024...	[more]
tr\|A0A0A0K4S7\|A0A0A0K4S7_CUCSA	5.1e-50	93.48	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G018740 PE=4 SV=1	[more]
tr\|V4SFG1\|V4SFG1_9ROSI	4.0e-47	90.31	Uncharacterized protein OS=Citrus clementina OX=85681 GN=CICLE_v10029213mg PE=4 ...	[more]
tr\|A0A067FLH0\|A0A067FLH0_CITSI	4.0e-47	90.31	Uncharacterized protein OS=Citrus sinensis OX=2711 GN=CISIN_1g027000mg PE=4 SV=1	[more]
tr\|A0A2H5P143\|A0A2H5P143_CITUN	2.2e-45	89.91	Uncharacterized protein OS=Citrus unshiu OX=55188 GN=CUMW_094280 PE=4 SV=1	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR010422	Ccdc124

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg26368-RA	Carg26368-RA	mRNA

InterPro

Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 103..138
None	No IPR available	COILS	Coil	Coil	coord: 50..86
None	No IPR available	COILS	Coil	Coil	coord: 11..33
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 111..142
IPR010422	Coiled-coil domain-containing protein 124	PFAM	PF06244	Ccdc124	coord: 111..226 e-value: 9.1E-38 score: 129.7
IPR010422	Coiled-coil domain-containing protein 124	PANTHER	PTHR21680	UNCHARACTERIZED	coord: 1..229

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Carg26368	Cla015788	Watermelon (97103) v1	carwmB1048
Carg26368	Csa7G018740	Cucumber (Chinese Long) v2	carcuB1063
Carg26368	MELO3C013309	Melon (DHL92) v3.5.1	carmeB1016
Carg26368	ClCG02G003730	Watermelon (Charleston Gray)	carwcgB1020
Carg26368	CSPI07G01340	Wild cucumber (PI 183967)	carcpiB1084
Carg26368	Cucsa.099230	Cucumber (Gy14) v1	carcgyB1163
Carg26368	CmaCh19G007650	Cucurbita maxima (Rimu)	carcmaB1452
Carg26368	CmoCh11G017630	Cucurbita moschata (Rifu)	carcmoB1405
Carg26368	CmoCh19G007800	Cucurbita moschata (Rifu)	carcmoB1406
Carg26368	Lsi11G012410	Bottle gourd (USVL1VR-Ls)	carlsiB956
Carg26368	Cp4.1LG04g04670	Cucurbita pepo (Zucchini)	carcpeB1460
Carg26368	Cp4.1LG15g06180	Cucurbita pepo (Zucchini)	carcpeB1459
Carg26368	CsGy7G001180	Cucumber (Gy14) v2	carcgybB1032
Carg26368	MELO3C013309.2	Melon (DHL92) v3.6.1	carmedB1028
Carg26368	CsaV3_7G001410	Cucumber (Chinese Long) v3	carcucB1096
Carg26368	Cla97C02G030480	Watermelon (97103) v2	carwmbB1106
Carg26368	Bhi05G001412	Wax gourd	carwgoB1228

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
Carg26368	Carg25751	Silver-seed gourd	carcarB652

The following block(s) are covering this gene:


Gene	Organism	Block
Carg26368	Cucurbita maxima (Rimu)	carcmaB1451