Carg26299 (gene) Silver-seed gourd | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Carg26299
Type	gene
Organism	Cucurbita argyrosperma (Silver-seed gourd)
Description	cyclin-D3-3-like
Location	Cucurbita_argyrosperma_scaffold_399 : 16710 .. 18043 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAGAAACTACAGAATGGCGAAACGGCATTGCTACCCACTTTCAATTGCGCATTCAATTTCAGGTCACCAAAACGGTTCACTTTTTCTTGATTCCCTCTACTGCTTGGAGGAGGAGGAAGAAATTGGGGATGGACATTCCCAGCCGAAGATCGAAGCTTTCTCGATAAATGTTAACGTCGATTCCCCGAATTCTGTGTTCTTGTCGGACAGGGACTTTCTCTGGGAAGACGAGGAATTGGTGTCTCTGTTCTCAAAGGAGAACAGAAATAAGCTCCACGACGCTCTCCCACACAACCCCTCTCTAGCAGCGGCTCGCTCCGACGCGGTTGAGTGGATTCTCAAGGTCAATGCCCATTACTCCTTTACTGCCCTCACCGCCGTTTTGGCCGTTGATTATGTCGACAGGTTCCTGTCCAGCCCCCATTTTCAGATTGACAAGCCATGGATGACCCATCTCACCGCCATTGCCTGTTTATCTCTCGCTGCTAAAGTGGAGGAAACCGAAGTTCCCCTTCTTTTAGATCTCCAGGTAAACACAATTCCCATCTCGTTTGAATTCAATCTCCACATTTACGATTGTTAATTTCTTAAATCAAAATTGGGTTGTGGGTTGTCTTTTAATTTGTGGTAGGTGGAGGAAAATGGGTACTTTTTCGAAGCTAAAACCATTAAAAGAATGGAGATTCTTGTTCTCTCTACGCTTCTTTGGAGAATGAATCCGGTGAACCCACTTTCATTTTTGGACTATATTGTAAGACGGCTCGGCTTCAAGGACCAGCTCTGTTCTGAATTCCTCTGTAAATGTGAAAGATTACTTCTTTCTGTCATTTTAGGTGAGCCCCTATCAAAATCGACATAATTAATAACACCAAATTTGACTTCTGTCTTCATTAATTATTCTCTTTAACTCCCAGATTCCAGATTCGTATGCTTTCTTCCATCAGTGATAGCAAGCGCCATTATTTTTCAAGTTATCAACGACAAAGAACCCCATGTCGCAGCAAAATTCCACGATCAGCTTCTGGGTTTTCTTCAAATCGACAAGGTTTCTTTCTTTTTTTCCTTGTTCCCCCTTTATAGTCGTCTTTGGCAAACGAATTAACCGAAACTTATAATGTTTTTGTCGTGCTCTGTTTGTTCGGGTAGAATAAGGTGGAAGATTGCTCACAATTCATCATAGAGGCTTCACCGAGAGGACACACAAACAAACAAAGATTTGGTTTAGTGGACATGTCGTGCAGCTCAAATGGTCGGACTCAGAATGTGGACCGTGTAGTGTCGTCGCCGGAGACAGCAACGAAGAAGAGAAAAATTGATGAACAGCCACCGTAG

mRNA sequence

ATGAGAAACTACAGAATGGCGAAACGGCATTGCTACCCACTTTCAATTGCGCATTCAATTTCAGGTCACCAAAACGGTTCACTTTTTCTTGATTCCCTCTACTGCTTGGAGGAGGAGGAAGAAATTGGGGATGGACATTCCCAGCCGAAGATCGAAGCTTTCTCGATAAATGTTAACGTCGATTCCCCGAATTCTGTGTTCTTGTCGGACAGGGACTTTCTCTGGGAAGACGAGGAATTGGTGTCTCTGTTCTCAAAGGAGAACAGAAATAAGCTCCACGACGCTCTCCCACACAACCCCTCTCTAGCAGCGGCTCGCTCCGACGCGGTTGAGTGGATTCTCAAGGTCAATGCCCATTACTCCTTTACTGCCCTCACCGCCGTTTTGGCCGTTGATTATGTCGACAGGTTCCTGTCCAGCCCCCATTTTCAGATTGACAAGCCATGGATGACCCATCTCACCGCCATTGCCTGTTTATCTCTCGCTGCTAAAGTGGAGGAAACCGAAGTTCCCCTTCTTTTAGATCTCCAGGTGGAGGAAAATGGGTACTTTTTCGAAGCTAAAACCATTAAAAGAATGGAGATTCTTGTTCTCTCTACGCTTCTTTGGAGAATGAATCCGGTGAACCCACTTTCATTTTTGGACTATATTGTAAGACGGCTCGGCTTCAAGGACCAGCTCTGTTCTGAATTCCTCTGTAAATGTGAAAGATTACTTCTTTCTGTCATTTTAGATTCCAGATTCGTATGCTTTCTTCCATCAGTGATAGCAAGCGCCATTATTTTTCAAGTTATCAACGACAAAGAACCCCATGTCGCAGCAAAATTCCACGATCAGCTTCTGGGTTTTCTTCAAATCGACAAGAATAAGGTGGAAGATTGCTCACAATTCATCATAGAGGCTTCACCGAGAGGACACACAAACAAACAAAGATTTGGTTTAGTGGACATGTCGTGCAGCTCAAATGGTCGGACTCAGAATGTGGACCGTGTAGTGTCGTCGCCGGAGACAGCAACGAAGAAGAGAAAAATTGATGAACAGCCACCGTAG

Coding sequence (CDS)

ATGAGAAACTACAGAATGGCGAAACGGCATTGCTACCCACTTTCAATTGCGCATTCAATTTCAGGTCACCAAAACGGTTCACTTTTTCTTGATTCCCTCTACTGCTTGGAGGAGGAGGAAGAAATTGGGGATGGACATTCCCAGCCGAAGATCGAAGCTTTCTCGATAAATGTTAACGTCGATTCCCCGAATTCTGTGTTCTTGTCGGACAGGGACTTTCTCTGGGAAGACGAGGAATTGGTGTCTCTGTTCTCAAAGGAGAACAGAAATAAGCTCCACGACGCTCTCCCACACAACCCCTCTCTAGCAGCGGCTCGCTCCGACGCGGTTGAGTGGATTCTCAAGGTCAATGCCCATTACTCCTTTACTGCCCTCACCGCCGTTTTGGCCGTTGATTATGTCGACAGGTTCCTGTCCAGCCCCCATTTTCAGATTGACAAGCCATGGATGACCCATCTCACCGCCATTGCCTGTTTATCTCTCGCTGCTAAAGTGGAGGAAACCGAAGTTCCCCTTCTTTTAGATCTCCAGGTGGAGGAAAATGGGTACTTTTTCGAAGCTAAAACCATTAAAAGAATGGAGATTCTTGTTCTCTCTACGCTTCTTTGGAGAATGAATCCGGTGAACCCACTTTCATTTTTGGACTATATTGTAAGACGGCTCGGCTTCAAGGACCAGCTCTGTTCTGAATTCCTCTGTAAATGTGAAAGATTACTTCTTTCTGTCATTTTAGATTCCAGATTCGTATGCTTTCTTCCATCAGTGATAGCAAGCGCCATTATTTTTCAAGTTATCAACGACAAAGAACCCCATGTCGCAGCAAAATTCCACGATCAGCTTCTGGGTTTTCTTCAAATCGACAAGAATAAGGTGGAAGATTGCTCACAATTCATCATAGAGGCTTCACCGAGAGGACACACAAACAAACAAAGATTTGGTTTAGTGGACATGTCGTGCAGCTCAAATGGTCGGACTCAGAATGTGGACCGTGTAGTGTCGTCGCCGGAGACAGCAACGAAGAAGAGAAAAATTGATGAACAGCCACCGTAG

Protein sequence

MRNYRMAKRHCYPLSIAHSISGHQNGSLFLDSLYCLEEEEEIGDGHSQPKIEAFSINVNVDSPNSVFLSDRDFLWEDEELVSLFSKENRNKLHDALPHNPSLAAARSDAVEWILKVNAHYSFTALTAVLAVDYVDRFLSSPHFQIDKPWMTHLTAIACLSLAAKVEETEVPLLLDLQVEENGYFFEAKTIKRMEILVLSTLLWRMNPVNPLSFLDYIVRRLGFKDQLCSEFLCKCERLLLSVILDSRFVCFLPSVIASAIIFQVINDKEPHVAAKFHDQLLGFLQIDKNKVEDCSQFIIEASPRGHTNKQRFGLVDMSCSSNGRTQNVDRVVSSPETATKKRKIDEQPP

Homology

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BLAST of Carg26299 vs. NCBI nr
Match: XP_022936814.1 (cyclin-D3-3-like [Cucurbita moschata])

HSP 1 Score: 691.4 bits (1783), Expect = 1.6e-195
Identity = 345/349 (98.85%), Postives = 347/349 (99.43%), Query Frame = 0


Query: 1   MRNYRMAKRHCYPLSIAHSISGHQNGSLFLDSLYCLEEEEEIGDGHSQPKIEAFSINVNV 60
           MRNYRMAKRHCYPLSIAHSISGHQNGSLFLDSLYCLEEEEEIGDGHSQPKIEAFSINVNV
Sbjct: 1   MRNYRMAKRHCYPLSIAHSISGHQNGSLFLDSLYCLEEEEEIGDGHSQPKIEAFSINVNV 60

Query: 61  DSPNSVFLSDRDFLWEDEELVSLFSKENRNKLHDALPHNPSLAAARSDAVEWILKVNAHY 120
           DSPNSVFLSDRDFLWEDEELVSLFSKENRNKLHDALPHNPSLAAARSDAVEWILKVNAHY
Sbjct: 61  DSPNSVFLSDRDFLWEDEELVSLFSKENRNKLHDALPHNPSLAAARSDAVEWILKVNAHY 120

Query: 121 SFTALTAVLAVDYVDRFLSSPHFQIDKPWMTHLTAIACLSLAAKVEETEVPLLLDLQVEE 180
           SFTALTAVLAVDYVDRFLSSPHFQIDKPWMTHLTAIACLSLAAKVEETEVPLLLDLQVEE
Sbjct: 121 SFTALTAVLAVDYVDRFLSSPHFQIDKPWMTHLTAIACLSLAAKVEETEVPLLLDLQVEE 180

Query: 181 NGYFFEAKTIKRMEILVLSTLLWRMNPVNPLSFLDYIVRRLGFKDQLCSEFLCKCERLLL 240
           N YFFEAKTIKRMEILVLSTLLWRMNPVNPLSFLDYIVRRLGFKDQLCSEFLCKCERLLL
Sbjct: 181 NRYFFEAKTIKRMEILVLSTLLWRMNPVNPLSFLDYIVRRLGFKDQLCSEFLCKCERLLL 240

Query: 241 SVILDSRFVCFLPSVIASAIIFQVINDKEPHVAAKFHDQLLGFLQIDKNKVEDCSQFIIE 300
           SVILDSRFVCFLPS+IASAIIFQVINDKEPHVAAK+HDQLLGFLQIDKNKVEDCSQFIIE
Sbjct: 241 SVILDSRFVCFLPSMIASAIIFQVINDKEPHVAAKYHDQLLGFLQIDKNKVEDCSQFIIE 300

Query: 301 ASPRGHTNKQRFGLVDMSCSSNGRTQNVDRVVSSPETATKKRKIDEQPP 350
           AS RGHTNKQRFGLVDMSCSSNGRTQNVDRVVSSPETATKKRKIDEQPP
Sbjct: 301 ASSRGHTNKQRFGLVDMSCSSNGRTQNVDRVVSSPETATKKRKIDEQPP 349

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BLAST of Carg26299 vs. NCBI nr
Match: XP_023536077.1 (cyclin-D3-1-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 689.9 bits (1779), Expect = 4.5e-195
Identity = 345/349 (98.85%), Postives = 347/349 (99.43%), Query Frame = 0


Query: 1   MRNYRMAKRHCYPLSIAHSISGHQNGSLFLDSLYCLEEEEEIGDGHSQPKIEAFSINVNV 60
           MRNYRMAKRHCYPLSIAHSISGHQNGSLFLDSLYCLEEEEEIGDGHSQPKIEAFSINVNV
Sbjct: 1   MRNYRMAKRHCYPLSIAHSISGHQNGSLFLDSLYCLEEEEEIGDGHSQPKIEAFSINVNV 60

Query: 61  DSPNSVFLSDRDFLWEDEELVSLFSKENRNKLHDALPHNPSLAAARSDAVEWILKVNAHY 120
           DSPNSVFLSDRDFLWEDEELVSLFSKENRNKLHDALPHNPSLAAARSDAVEWILKVNAHY
Sbjct: 61  DSPNSVFLSDRDFLWEDEELVSLFSKENRNKLHDALPHNPSLAAARSDAVEWILKVNAHY 120

Query: 121 SFTALTAVLAVDYVDRFLSSPHFQIDKPWMTHLTAIACLSLAAKVEETEVPLLLDLQVEE 180
           SFTALTAVLAVDYVDRFLSS HFQIDKPWMTHLTAIACLSLAAKVEETEVPLLLDLQVEE
Sbjct: 121 SFTALTAVLAVDYVDRFLSSSHFQIDKPWMTHLTAIACLSLAAKVEETEVPLLLDLQVEE 180

Query: 181 NGYFFEAKTIKRMEILVLSTLLWRMNPVNPLSFLDYIVRRLGFKDQLCSEFLCKCERLLL 240
           NGYFFEAKTIKRMEILVLSTLLWRMNPVNPLSFLDYIVRRLGFKDQLCSEFLCKCERLLL
Sbjct: 181 NGYFFEAKTIKRMEILVLSTLLWRMNPVNPLSFLDYIVRRLGFKDQLCSEFLCKCERLLL 240

Query: 241 SVILDSRFVCFLPSVIASAIIFQVINDKEPHVAAKFHDQLLGFLQIDKNKVEDCSQFIIE 300
           SVILDSRFVCFLPSVIASAIIFQVINDKEPHVAAK++DQLLGFLQIDKNKVEDCSQFIIE
Sbjct: 241 SVILDSRFVCFLPSVIASAIIFQVINDKEPHVAAKYNDQLLGFLQIDKNKVEDCSQFIIE 300

Query: 301 ASPRGHTNKQRFGLVDMSCSSNGRTQNVDRVVSSPETATKKRKIDEQPP 350
           AS RGHTNKQRFGLVDMSCSSNGRTQNVDRVVSSPETATKKRKIDEQPP
Sbjct: 301 ASSRGHTNKQRFGLVDMSCSSNGRTQNVDRVVSSPETATKKRKIDEQPP 349

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BLAST of Carg26299 vs. NCBI nr
Match: XP_022977063.1 (cyclin-D3-1-like [Cucurbita maxima])

HSP 1 Score: 682.2 bits (1759), Expect = 9.4e-193
Identity = 340/349 (97.42%), Postives = 344/349 (98.57%), Query Frame = 0


Query: 1   MRNYRMAKRHCYPLSIAHSISGHQNGSLFLDSLYCLEEEEEIGDGHSQPKIEAFSINVNV 60
           MRNYRMAKRHCYPLS+AHSISGHQN SLFLDSLYCLEEE+ IGDGHSQPKIEAFSINVNV
Sbjct: 1   MRNYRMAKRHCYPLSVAHSISGHQNVSLFLDSLYCLEEEDGIGDGHSQPKIEAFSINVNV 60

Query: 61  DSPNSVFLSDRDFLWEDEELVSLFSKENRNKLHDALPHNPSLAAARSDAVEWILKVNAHY 120
           DSPNSVFLSDRDFLWEDEELVSLFSKENRNKLHDALPHNPSLAAARSDAVEWILKVNAHY
Sbjct: 61  DSPNSVFLSDRDFLWEDEELVSLFSKENRNKLHDALPHNPSLAAARSDAVEWILKVNAHY 120

Query: 121 SFTALTAVLAVDYVDRFLSSPHFQIDKPWMTHLTAIACLSLAAKVEETEVPLLLDLQVEE 180
           SFT LTAVLAVDYVDRFLSSPHFQIDKPWMTHLTAIACLSLAAKVEETEVPLLLDLQVEE
Sbjct: 121 SFTTLTAVLAVDYVDRFLSSPHFQIDKPWMTHLTAIACLSLAAKVEETEVPLLLDLQVEE 180

Query: 181 NGYFFEAKTIKRMEILVLSTLLWRMNPVNPLSFLDYIVRRLGFKDQLCSEFLCKCERLLL 240
           NGYFFEAKTIKRMEILVLSTLLWRMNPVNPLSFLDYIVRRLGFKDQLCSEFLCKCERLLL
Sbjct: 181 NGYFFEAKTIKRMEILVLSTLLWRMNPVNPLSFLDYIVRRLGFKDQLCSEFLCKCERLLL 240

Query: 241 SVILDSRFVCFLPSVIASAIIFQVINDKEPHVAAKFHDQLLGFLQIDKNKVEDCSQFIIE 300
           SVILDSRFVCFLPS+IASAIIFQVINDKEPHVAAK+ DQLLGFLQIDKNKVEDCSQFIIE
Sbjct: 241 SVILDSRFVCFLPSLIASAIIFQVINDKEPHVAAKYQDQLLGFLQIDKNKVEDCSQFIIE 300

Query: 301 ASPRGHTNKQRFGLVDMSCSSNGRTQNVDRVVSSPETATKKRKIDEQPP 350
           AS RGHTNKQRFGLVDMSCSSNGRTQNVDRVVSSPETATKKRKIDEQPP
Sbjct: 301 ASSRGHTNKQRFGLVDMSCSSNGRTQNVDRVVSSPETATKKRKIDEQPP 349

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BLAST of Carg26299 vs. NCBI nr
Match: XP_004141274.1 (PREDICTED: cyclin-D3-2-like [Cucumis sativus] >KGN55234.1 hypothetical protein Csa_4G641660 [Cucumis sativus])

HSP 1 Score: 544.3 bits (1401), Expect = 3.1e-151
Identity = 277/354 (78.25%), Postives = 309/354 (87.29%), Query Frame = 0


Query: 1   MRNYRMAKRHCYPLSIAHSISGHQNGSLFLDSLYCLEEEEEIGDGHSQPKIEAFSINVNV 60
           MRNYRMAK HCYP   + SIS H N SL LDSLYC E+E E G  +SQPK + FSIN+N+
Sbjct: 1   MRNYRMAKPHCYP---SLSISTHHNTSLLLDSLYCFEDEVEDGHSNSQPKFQPFSINLNI 60

Query: 61  DSPNSVFLSDRDFLWEDEELVSLFSKENRNKLHDALPHNPSLAAARSDAVEWILKVNAHY 120
           +SPNSVFLSD    WED+ELVSLFSKEN NKLH+ LPHNPSLAAARS AV WILKVN+HY
Sbjct: 61  NSPNSVFLSD----WEDDELVSLFSKENGNKLHNTLPHNPSLAAARSKAVHWILKVNSHY 120

Query: 121 SFTALTAVLAVDYVDRFLSSPHFQIDKPWMTHLTAIACLSLAAKVEETEVPLLLDLQVEE 180
           SF+A TAVLAVDYVDRFLS+PHF I+KPWMTHLTAIA LSLAAKVEET+VPLLLDLQVEE
Sbjct: 121 SFSAHTAVLAVDYVDRFLSTPHFHIEKPWMTHLTAIASLSLAAKVEETQVPLLLDLQVEE 180

Query: 181 NGYFFEAKTIKRMEILVLSTLLWRMNPVNPLSFLDYIVRRLGFKDQLCSEFLCKCERLLL 240
           N YFFEAKTI RMEILVLSTL+WRMNPVNPLSFLDYIVRRLGFKDQLCS+ LCKCERLLL
Sbjct: 181 NEYFFEAKTITRMEILVLSTLVWRMNPVNPLSFLDYIVRRLGFKDQLCSQLLCKCERLLL 240

Query: 241 SVILDSRFVCFLPSVIASAIIFQVINDKEPHVAAKFHDQLLGFLQIDKNKVEDCSQFIIE 300
           SVI+D RFVCFLPSV+A+AIIFQVIND EPH+A K+H+QL+GFLQIDK+K+E+CS+FI+E
Sbjct: 241 SVIIDCRFVCFLPSVLATAIIFQVINDIEPHLATKYHNQLMGFLQIDKDKMEECSRFILE 300

Query: 301 ASPRGH-----TNKQRFGLVDMSCSSNGRTQNVDRVVSSPETATKKRKIDEQPP 350
           AS +G       NKQRFGLVDMSCSSNG  +NVD +VSSPETA+KKRKIDEQ P
Sbjct: 301 ASWKGQRKEWKNNKQRFGLVDMSCSSNGGNRNVDTMVSSPETASKKRKIDEQHP 347

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BLAST of Carg26299 vs. NCBI nr
Match: XP_022135319.1 (cyclin-D3-1-like [Momordica charantia] >XP_022135326.1 cyclin-D3-1-like [Momordica charantia])

HSP 1 Score: 542.3 bits (1396), Expect = 1.2e-150
Identity = 285/356 (80.06%), Postives = 310/356 (87.08%), Query Frame = 0


Query: 1   MRNYRMAKRHCYPLSIAHSI-SGHQN-GSLFLDSLYCLEEEEEIGDGHSQPKIEAFSI-N 60
           MRNYRMAKRHCYP+SIAHSI SG+QN  S+ LDSLYCLEE+ E      +PK EA S+ N
Sbjct: 1   MRNYRMAKRHCYPISIAHSISSGYQNSSSILLDSLYCLEEQWE-----EEPKHEANSVLN 60

Query: 61  VNVDSPNSVFLSDRDFLWEDEELVSLFSKENRNKLHDALPHNPSLAAARSDAVEWILKVN 120
           VN+ SPNSV LS+RDFLWEDEELVSLFSKE +NK H+ LP NP LAAAR+ AV+WILKVN
Sbjct: 61  VNIHSPNSVVLSERDFLWEDEELVSLFSKETKNKXHNTLPQNPLLAAARAKAVDWILKVN 120

Query: 121 AHYSFTALTAVLAVDYVDRFLSSPHFQIDKPWMTHLTAIACLSLAAKVEETEVPLLLDLQ 180
           AHYSFTALTAVLAVDYVDRFLSSPHFQI KPWMTHLTAIACLSLAAKVEET+VPLLLDLQ
Sbjct: 121 AHYSFTALTAVLAVDYVDRFLSSPHFQIGKPWMTHLTAIACLSLAAKVEETQVPLLLDLQ 180

Query: 181 VEENGYFFEAKTIKRMEILVLSTLLWRMNPVNPLSFLDYIVRRLGFKDQLCSEFLCKCER 240
           VEEN YFFEAKTIKRMEILVLSTLLWRMNPVNPLSFLDYIVRRLG KDQLCSEFLC+CER
Sbjct: 181 VEENEYFFEAKTIKRMEILVLSTLLWRMNPVNPLSFLDYIVRRLGLKDQLCSEFLCRCER 240

Query: 241 LLLSVILDSRFVCFLPSVIASAIIFQVINDKEPHVAAKFHDQLLGFLQIDKNKVEDCSQF 300
           LLLSVILDSRFVCFLPSV+ASAI+ +VIND EP VA K+HDQLLGFLQ+DK+KVEDCS+F
Sbjct: 241 LLLSVILDSRFVCFLPSVMASAIMLRVINDVEPCVAVKYHDQLLGFLQVDKDKVEDCSRF 300

Query: 301 IIEASPRGHTN-----KQRFGLVDMSCSSNGRTQNVDRVVSSPETATKKRKIDEQP 349
           I EAS RGH N     K+RFG +DMSC SNGR +NVD    SPE ATKK K+DEQP
Sbjct: 301 ITEAS-RGHINEFEFKKRRFGSIDMSCVSNGRNRNVD----SPEAATKKSKVDEQP 346

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BLAST of Carg26299 vs. TAIR10
Match: AT3G50070.1 (CYCLIN D3;3)

HSP 1 Score: 254.6 bits (649), Expect = 8.8e-68
Identity = 154/338 (45.56%), Postives = 207/338 (61.24%), Query Frame = 0


Query: 30  LDSLYCLEEEEEIGDGHSQPKIEAFSINVNVDSPNSVFLSDRDFLWEDEELVSLFSKENR 89
           LD L+C EE E     H Q  ++    +V      ++ LSD D LW+D+EL +L SK+  
Sbjct: 17  LDGLFCEEESE----FHEQ--VDLCDESVEKFPFLNLGLSDHDMLWDDDELSTLISKQ-E 76

Query: 90  NKLHDALPHNPSLAAARSDAVEWILKVNAHYSFTALTAVLAVDYVDRFLSSPHFQIDKPW 149
             L+D +  +  L   R  A++WI KV +HY F +LTA+LAV+Y DRF++S  FQ DKPW
Sbjct: 77  PCLYDEILDDEFLVLCREKALDWIFKVKSHYGFNSLTALLAVNYFDRFITSRKFQTDKPW 136

Query: 150 MTHLTAIACLSLAAKVEETEVPLLLDLQVEENGYFFEAKTIKRMEILVLSTLLWRMNPVN 209
           M+ LTA+ACLSLAAKVEE  VP LLD QVEE  Y FEAKTI+RME+LVLSTL WRM+PV 
Sbjct: 137 MSQLTALACLSLAAKVEEIRVPFLLDFQVEEARYVFEAKTIQRMELLVLSTLDWRMHPVT 196

Query: 210 PLSFLDYIVRRLGFKDQLCSEFLCKCERLLLSVILDSRFVCFLPSVIASAIIFQVINDKE 269
           P+SF D+I+RR  FK     EFL +CE LLLS+I DSRF+ F PSV+A+AI+  VI D +
Sbjct: 197 PISFFDHIIRRYSFKSHHQLEFLSRCESLLLSIIPDSRFLSFSPSVLATAIMVSVIRDLK 256

Query: 270 PHVAAKFHDQLLGFLQIDKNKVEDCSQFIIEASPRGHTNKQR-----------FGLVDMS 329
               A +  QL+  L++D  KV  C + +++ SP    +K+R            G+ D S
Sbjct: 257 MCDEAVYQSQLMTLLKVDSEKVNKCYELVLDHSP----SKKRMMNWMQQPASPIGVFDAS 316

Query: 330 CSSNGRTQNVDRVVSS---------PETATKKRKIDEQ 348
            SS+  + N   VVS+              K+R++ EQ
Sbjct: 317 FSSD--SSNESWVVSAXXXXXXXXXXXXLLKRRRVQEQ 341

[Close]

BLAST of Carg26299 vs. TAIR10
Match: AT5G67260.1 (CYCLIN D3;2)

HSP 1 Score: 251.9 bits (642), Expect = 5.7e-67
Identity = 141/305 (46.23%), Postives = 198/305 (64.92%), Query Frame = 0


Query: 24  QNGSL-FLDSLYCLEE----EEEIGDGHSQPKIEAFSINVNVDSPNSVFLSDRD-FLWED 83
           QNG+   LD LYC EE    E+++ D      +E    +V        FL   D FLW+D
Sbjct: 11  QNGAFCVLDGLYCEEETGFVEDDLDDDGDLDFLEKSDESV----VKFQFLPLLDMFLWDD 70

Query: 84  EELVSLFSKENR-NKLHDALPHNPSLAAARSDAVEWILKVNAHYSFTALTAVLAVDYVDR 143
           +E++SL SKEN  N        +  L + R +A++W+L+V +HY FT+LTA+LAV+Y DR
Sbjct: 71  DEILSLISKENETNPCFGEQILDGFLVSCRKEALDWVLRVKSHYGFTSLTAILAVNYFDR 130

Query: 144 FLSSPHFQIDKPWMTHLTAIACLSLAAKVEETEVPLLLDLQVEENGYFFEAKTIKRMEIL 203
           F++S   Q DKPWM+ L A+A LSLAAKVEE +VPLLLDLQVEE  Y FEAKTI+RME+L
Sbjct: 131 FMTSIKLQTDKPWMSQLVAVASLSLAAKVEEIQVPLLLDLQVEEARYLFEAKTIQRMELL 190

Query: 204 VLSTLLWRMNPVNPLSFLDYIVRRLGFKDQLCSEFLCKCERLLLSVILDSRFVCFLPSVI 263
           +LSTL WRM+PV P+SF D+I+RR G K     +F  KCERLL+SVI D+RF+ + PSV+
Sbjct: 191 ILSTLQWRMHPVTPISFFDHIIRRFGSKWHQQLDFCRKCERLLISVIADTRFMRYFPSVL 250

Query: 264 ASAIIFQVINDKEPHVAAKFHDQLLGFLQIDKNKVEDCSQFIIEASPRGHTNKQRFGLVD 322
           A+AI+  V  + +P    ++  Q+   L++++ KV +C + ++E +P   + K+   LVD
Sbjct: 251 ATAIMILVFEELKPCDEVEYQSQITTLLKVNQEKVNECYELLLEHNP---SKKRMMNLVD 308

[Close]

BLAST of Carg26299 vs. TAIR10
Match: AT4G34160.1 (CYCLIN D3;1)

HSP 1 Score: 232.6 bits (592), Expect = 3.6e-61
Identity = 119/221 (53.85%), Postives = 157/221 (71.04%), Query Frame = 0


Query: 80  LVSLFSKENRNKLHDALPHNPSLAAARSDAVEWILKVNAHYSFTALTAVLAVDYVDRFLS 139
           LV+LFSKE    L  +   +  L+  R +AV WIL+VNAHY F+ L AVLA+ Y+D+F+ 
Sbjct: 63  LVTLFSKEEEQGL--SCLDDVYLSTDRKEAVGWILRVNAHYGFSTLAAVLAITYLDKFIC 122

Query: 140 SPHFQIDKPWMTHLTAIACLSLAAKVEETEVPLLLDLQVEENGYFFEAKTIKRMEILVLS 199
           S   Q DKPWM  L ++ACLSLAAKVEET+VPLLLD QVEE  Y FEAKTI+RME+L+LS
Sbjct: 123 SYSLQRDKPWMLQLVSVACLSLAAKVEETQVPLLLDFQVEETKYVFEAKTIQRMELLILS 182

Query: 200 TLLWRMNPVNPLSFLDYIVRRLGFKDQLCSEFLCKCERLLLSVILDSRFVCFLPSVIASA 259
           TL W+M+ + P+SF+D+I+RRLG K+    +FL KC RLLLSVI DSRFV +LPSV+A+A
Sbjct: 183 TLEWKMHLITPISFVDHIIRRLGLKNNAHWDFLNKCHRLLLSVISDSRFVGYLPSVVAAA 242

Query: 260 IIFQVINDKEPHVAAKFHDQLLGFLQIDKNKVEDCSQFIIE 301
            + ++I   +P     +   LLG L + K KV+ C   I++
Sbjct: 243 TMMRIIEQVDPFDPLSYQTNLLGVLNLTKEKVKTCYDLILQ 281

[Close]

BLAST of Carg26299 vs. TAIR10
Match: AT1G70210.1 (CYCLIN D1;1)

HSP 1 Score: 139.8 bits (351), Expect = 3.2e-33
Identity = 77/165 (46.67%), Postives = 101/165 (61.21%), Query Frame = 0


Query: 103 AAARSDAVEWILKVNAHYSFTALTAVLAVDYVDRFLSSPHFQIDKPWMTHLTAIACLSLA 162
           A+AR D+V WILKV A+Y+F  LTA LAV+Y+DRFL +        W   L A+ACLSLA
Sbjct: 79  ASAREDSVAWILKVQAYYNFQPLTAYLAVNYMDRFLYARRLPETSGWPMQLLAVACLSLA 138

Query: 163 AKVEETEVPLLLDLQVEENGYFFEAKTIKRMEILVLSTLLWRMNPVNPLSFLDYIVRRLG 222
           AK+EE  VP L D QV    Y FEAKTIKRME+LVLS L WR+  V P  F+ +   ++ 
Sbjct: 139 AKMEEILVPSLFDFQVAGVKYLFEAKTIKRMELLVLSVLDWRLRSVTPFDFISFFAYKID 198

Query: 223 FKDQLCSEFLCKCERLLLSVILDSRFVCFLPSVIASAIIFQVIND 268
                   F+     ++LS I ++ F+ + PS IA+A I  V N+
Sbjct: 199 PSGTFLGFFISHATEIILSNIKEASFLEYWPSSIAAAAILCVANE 243

[Close]

BLAST of Carg26299 vs. TAIR10
Match: AT2G22490.2 (Cyclin D2;1)

HSP 1 Score: 138.7 bits (348), Expect = 7.1e-33
Identity = 72/161 (44.72%), Postives = 105/161 (65.22%), Query Frame = 0


Query: 104 AARSDAVEWILKVNAHYSFTALTAVLAVDYVDRFLSSPHFQIDKPWMTHLTAIACLSLAA 163
           + R+ A++WILKV AHY F  L   L+++Y+DRFL+S     DK W   L A++CLSLA+
Sbjct: 95  SVRNQALDWILKVCAHYHFGHLCICLSMNYLDRFLTSYELPKDKDWAAQLLAVSCLSLAS 154

Query: 164 KVEETEVPLLLDLQVEENGYFFEAKTIKRMEILVLSTLLWRMNPVNPLSFLDYIVRRLGF 223
           K+EET+VP ++DLQVE+  + FEAKTIKRME+LV++TL WR+  + P SF+DY V ++  
Sbjct: 155 KMEETDVPHIVDLQVEDPKFVFEAKTIKRMELLVVTTLNWRLQALTPFSFIDYFVDKI-- 214

Query: 224 KDQLCSEFLCKCERLLLSVILDSRFVCFLPSVIASAIIFQV 265
              +    + +  R +L+      F+ F PS IA+A    V
Sbjct: 215 SGHVSENLIYRSSRFILNTTKAIEFLDFRPSEIAAAAAVSV 253

[Close]

BLAST of Carg26299 vs. Swiss-Prot
Match: sp|Q9SN11|CCD33_ARATH (Cyclin-D3-3 OS=Arabidopsis thaliana OX=3702 GN=CYCD3-3 PE=2 SV=1)

HSP 1 Score: 254.6 bits (649), Expect = 1.6e-66
Identity = 154/338 (45.56%), Postives = 207/338 (61.24%), Query Frame = 0


Query: 30  LDSLYCLEEEEEIGDGHSQPKIEAFSINVNVDSPNSVFLSDRDFLWEDEELVSLFSKENR 89
           LD L+C EE E     H Q  ++    +V      ++ LSD D LW+D+EL +L SK+  
Sbjct: 17  LDGLFCEEESE----FHEQ--VDLCDESVEKFPFLNLGLSDHDMLWDDDELSTLISKQ-E 76

Query: 90  NKLHDALPHNPSLAAARSDAVEWILKVNAHYSFTALTAVLAVDYVDRFLSSPHFQIDKPW 149
             L+D +  +  L   R  A++WI KV +HY F +LTA+LAV+Y DRF++S  FQ DKPW
Sbjct: 77  PCLYDEILDDEFLVLCREKALDWIFKVKSHYGFNSLTALLAVNYFDRFITSRKFQTDKPW 136

Query: 150 MTHLTAIACLSLAAKVEETEVPLLLDLQVEENGYFFEAKTIKRMEILVLSTLLWRMNPVN 209
           M+ LTA+ACLSLAAKVEE  VP LLD QVEE  Y FEAKTI+RME+LVLSTL WRM+PV 
Sbjct: 137 MSQLTALACLSLAAKVEEIRVPFLLDFQVEEARYVFEAKTIQRMELLVLSTLDWRMHPVT 196

Query: 210 PLSFLDYIVRRLGFKDQLCSEFLCKCERLLLSVILDSRFVCFLPSVIASAIIFQVINDKE 269
           P+SF D+I+RR  FK     EFL +CE LLLS+I DSRF+ F PSV+A+AI+  VI D +
Sbjct: 197 PISFFDHIIRRYSFKSHHQLEFLSRCESLLLSIIPDSRFLSFSPSVLATAIMVSVIRDLK 256

Query: 270 PHVAAKFHDQLLGFLQIDKNKVEDCSQFIIEASPRGHTNKQR-----------FGLVDMS 329
               A +  QL+  L++D  KV  C + +++ SP    +K+R            G+ D S
Sbjct: 257 MCDEAVYQSQLMTLLKVDSEKVNKCYELVLDHSP----SKKRMMNWMQQPASPIGVFDAS 316

Query: 330 CSSNGRTQNVDRVVSS---------PETATKKRKIDEQ 348
            SS+  + N   VVS+              K+R++ EQ
Sbjct: 317 FSSD--SSNESWVVSAXXXXXXXXXXXXLLKRRRVQEQ 341

[Close]

BLAST of Carg26299 vs. Swiss-Prot
Match: sp|Q9FGQ7|CCD32_ARATH (Cyclin-D3-2 OS=Arabidopsis thaliana OX=3702 GN=CYCD3-2 PE=1 SV=1)

HSP 1 Score: 251.9 bits (642), Expect = 1.0e-65
Identity = 141/305 (46.23%), Postives = 198/305 (64.92%), Query Frame = 0


Query: 24  QNGSL-FLDSLYCLEE----EEEIGDGHSQPKIEAFSINVNVDSPNSVFLSDRD-FLWED 83
           QNG+   LD LYC EE    E+++ D      +E    +V        FL   D FLW+D
Sbjct: 11  QNGAFCVLDGLYCEEETGFVEDDLDDDGDLDFLEKSDESV----VKFQFLPLLDMFLWDD 70

Query: 84  EELVSLFSKENR-NKLHDALPHNPSLAAARSDAVEWILKVNAHYSFTALTAVLAVDYVDR 143
           +E++SL SKEN  N        +  L + R +A++W+L+V +HY FT+LTA+LAV+Y DR
Sbjct: 71  DEILSLISKENETNPCFGEQILDGFLVSCRKEALDWVLRVKSHYGFTSLTAILAVNYFDR 130

Query: 144 FLSSPHFQIDKPWMTHLTAIACLSLAAKVEETEVPLLLDLQVEENGYFFEAKTIKRMEIL 203
           F++S   Q DKPWM+ L A+A LSLAAKVEE +VPLLLDLQVEE  Y FEAKTI+RME+L
Sbjct: 131 FMTSIKLQTDKPWMSQLVAVASLSLAAKVEEIQVPLLLDLQVEEARYLFEAKTIQRMELL 190

Query: 204 VLSTLLWRMNPVNPLSFLDYIVRRLGFKDQLCSEFLCKCERLLLSVILDSRFVCFLPSVI 263
           +LSTL WRM+PV P+SF D+I+RR G K     +F  KCERLL+SVI D+RF+ + PSV+
Sbjct: 191 ILSTLQWRMHPVTPISFFDHIIRRFGSKWHQQLDFCRKCERLLISVIADTRFMRYFPSVL 250

Query: 264 ASAIIFQVINDKEPHVAAKFHDQLLGFLQIDKNKVEDCSQFIIEASPRGHTNKQRFGLVD 322
           A+AI+  V  + +P    ++  Q+   L++++ KV +C + ++E +P   + K+   LVD
Sbjct: 251 ATAIMILVFEELKPCDEVEYQSQITTLLKVNQEKVNECYELLLEHNP---SKKRMMNLVD 308

[Close]

BLAST of Carg26299 vs. Swiss-Prot
Match: sp|P42753|CCD31_ARATH (Cyclin-D3-1 OS=Arabidopsis thaliana OX=3702 GN=CYCD3-1 PE=1 SV=3)

HSP 1 Score: 232.6 bits (592), Expect = 6.5e-60
Identity = 119/221 (53.85%), Postives = 157/221 (71.04%), Query Frame = 0


Query: 80  LVSLFSKENRNKLHDALPHNPSLAAARSDAVEWILKVNAHYSFTALTAVLAVDYVDRFLS 139
           LV+LFSKE    L  +   +  L+  R +AV WIL+VNAHY F+ L AVLA+ Y+D+F+ 
Sbjct: 63  LVTLFSKEEEQGL--SCLDDVYLSTDRKEAVGWILRVNAHYGFSTLAAVLAITYLDKFIC 122

Query: 140 SPHFQIDKPWMTHLTAIACLSLAAKVEETEVPLLLDLQVEENGYFFEAKTIKRMEILVLS 199
           S   Q DKPWM  L ++ACLSLAAKVEET+VPLLLD QVEE  Y FEAKTI+RME+L+LS
Sbjct: 123 SYSLQRDKPWMLQLVSVACLSLAAKVEETQVPLLLDFQVEETKYVFEAKTIQRMELLILS 182

Query: 200 TLLWRMNPVNPLSFLDYIVRRLGFKDQLCSEFLCKCERLLLSVILDSRFVCFLPSVIASA 259
           TL W+M+ + P+SF+D+I+RRLG K+    +FL KC RLLLSVI DSRFV +LPSV+A+A
Sbjct: 183 TLEWKMHLITPISFVDHIIRRLGLKNNAHWDFLNKCHRLLLSVISDSRFVGYLPSVVAAA 242

Query: 260 IIFQVINDKEPHVAAKFHDQLLGFLQIDKNKVEDCSQFIIE 301
            + ++I   +P     +   LLG L + K KV+ C   I++
Sbjct: 243 TMMRIIEQVDPFDPLSYQTNLLGVLNLTKEKVKTCYDLILQ 281

[Close]

BLAST of Carg26299 vs. Swiss-Prot
Match: sp|Q6YXH8|CCD41_ORYSJ (Cyclin-D4-1 OS=Oryza sativa subsp. japonica OX=39947 GN=CYCD4-1 PE=2 SV=2)

HSP 1 Score: 160.2 bits (404), Expect = 4.1e-38
Identity = 90/193 (46.63%), Postives = 117/193 (60.62%), Query Frame = 0


Query: 106 RSDAVEWILKVNAHYSFTALTAVLAVDYVDRFLSSPHFQIDKPWMTHLTAIACLSLAAKV 165
           R DA++WI KV+++YSF  LTA LAV+Y+DRFLS       K WMT L A+ACLSLAAK+
Sbjct: 103 RMDAIDWIWKVHSYYSFAPLTACLAVNYLDRFLSLYQLPDGKDWMTQLLAVACLSLAAKM 162

Query: 166 EETEVPLLLDLQVEENGYFFEAKTIKRMEILVLSTLLWRMNPVNPLSFLDYIVRRLGFKD 225
           EET+VP  LDLQV E  Y FEAKTI+RME+LVLSTL WRM  V P S++DY +R L   D
Sbjct: 163 EETDVPQSLDLQVGEERYVFEAKTIQRMELLVLSTLKWRMQAVTPFSYVDYFLRELNGGD 222

Query: 226 QLCSEFLCKCERLLLSVILDSRFVCFLPSVIASAIIFQVINDKEPHVAAKFHDQLLGFLQ 285
                       L+L +   +  + F PS IA+A+   V+   E H A         F  
Sbjct: 223 PPSGRSALLSSELILCIARGTECLGFRPSEIAAAVAAAVVG--EEHAA---------FSH 282

Query: 286 IDKNKVEDCSQFI 299
           ++K ++  C + I
Sbjct: 283 VNKERMSHCQEVI 284

[Close]

BLAST of Carg26299 vs. Swiss-Prot
Match: sp|Q10K98|CCD23_ORYSJ (Putative cyclin-D2-3 OS=Oryza sativa subsp. japonica OX=39947 GN=CYCD2-3 PE=3 SV=1)

HSP 1 Score: 150.6 bits (379), Expect = 3.2e-35
Identity = 102/291 (35.05%), Postives = 151/291 (51.89%), Query Frame = 0


Query: 32  SLYCLEEEEEIGDGHSQPKIEAFSINVNVDSPNSVFLSDRDFLWE----DEELVSLFSKE 91
           SL C E+ E +         E  ++   +    S+  S    L +     EELV  F ++
Sbjct: 18  SLLCEEDSESVFGSDDDGVEETATMAPELGKMMSLGFSASHHLGDGGGGGEELVGSFMEK 77

Query: 92  N--------RNKLHDALPHNPSLAAARSDAVEWILKVNAHYSFTALTAVLAVDYVDRFLS 151
                    R +    L +     + R  A++WI KV A+YSF  L A LAV+Y+DRFLS
Sbjct: 78  EVEQMVETARGEYLTKLSNGGIELSCRIAAIDWICKVQAYYSFGPLCAYLAVNYLDRFLS 137

Query: 152 SPHFQI--DKPWMTHLTAIACLSLAAKVEETEVPLLLDLQVEENGYFFEAKTIKRMEILV 211
           S  F +  D PWM  L  +ACLSLAAK+EET  P  LDLQV    Y F+A+TI RMEI+V
Sbjct: 138 SVEFSVTNDMPWMQQLLIVACLSLAAKMEETAAPGTLDLQVCNPEYVFDAETIHRMEIIV 197

Query: 212 LSTLLWRMNPVNPLSFLDYIVRRLGFKDQLCSEFLCKCERLLLSVILDSRFVCFLPSVIA 271
           L+TL WRM  V P +++ + + ++   +++ SE + +C  ++LS +  + F+ F PS IA
Sbjct: 198 LTTLKWRMQAVTPFTYIGHFLDKINEGNRITSELISRCTEIILSTMKATVFLRFRPSEIA 257

Query: 272 SAIIFQVINDKEPHVAAKFHDQLLGF--------LQIDKNKVEDCSQFIIE 301
           +A+   V+ D           ++L F        L +DK+ V  C Q + E
Sbjct: 258 TAVALSVVAD---------GGRVLDFGGVLESSKLPVDKDNVGRCHQAMQE 299

[Close]

BLAST of Carg26299 vs. TrEMBL
Match: tr|A0A0A0L2H1|A0A0A0L2H1_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G641660 PE=3 SV=1)

HSP 1 Score: 544.3 bits (1401), Expect = 2.0e-151
Identity = 277/354 (78.25%), Postives = 309/354 (87.29%), Query Frame = 0


Query: 1   MRNYRMAKRHCYPLSIAHSISGHQNGSLFLDSLYCLEEEEEIGDGHSQPKIEAFSINVNV 60
           MRNYRMAK HCYP   + SIS H N SL LDSLYC E+E E G  +SQPK + FSIN+N+
Sbjct: 1   MRNYRMAKPHCYP---SLSISTHHNTSLLLDSLYCFEDEVEDGHSNSQPKFQPFSINLNI 60

Query: 61  DSPNSVFLSDRDFLWEDEELVSLFSKENRNKLHDALPHNPSLAAARSDAVEWILKVNAHY 120
           +SPNSVFLSD    WED+ELVSLFSKEN NKLH+ LPHNPSLAAARS AV WILKVN+HY
Sbjct: 61  NSPNSVFLSD----WEDDELVSLFSKENGNKLHNTLPHNPSLAAARSKAVHWILKVNSHY 120

Query: 121 SFTALTAVLAVDYVDRFLSSPHFQIDKPWMTHLTAIACLSLAAKVEETEVPLLLDLQVEE 180
           SF+A TAVLAVDYVDRFLS+PHF I+KPWMTHLTAIA LSLAAKVEET+VPLLLDLQVEE
Sbjct: 121 SFSAHTAVLAVDYVDRFLSTPHFHIEKPWMTHLTAIASLSLAAKVEETQVPLLLDLQVEE 180

Query: 181 NGYFFEAKTIKRMEILVLSTLLWRMNPVNPLSFLDYIVRRLGFKDQLCSEFLCKCERLLL 240
           N YFFEAKTI RMEILVLSTL+WRMNPVNPLSFLDYIVRRLGFKDQLCS+ LCKCERLLL
Sbjct: 181 NEYFFEAKTITRMEILVLSTLVWRMNPVNPLSFLDYIVRRLGFKDQLCSQLLCKCERLLL 240

Query: 241 SVILDSRFVCFLPSVIASAIIFQVINDKEPHVAAKFHDQLLGFLQIDKNKVEDCSQFIIE 300
           SVI+D RFVCFLPSV+A+AIIFQVIND EPH+A K+H+QL+GFLQIDK+K+E+CS+FI+E
Sbjct: 241 SVIIDCRFVCFLPSVLATAIIFQVINDIEPHLATKYHNQLMGFLQIDKDKMEECSRFILE 300

Query: 301 ASPRGH-----TNKQRFGLVDMSCSSNGRTQNVDRVVSSPETATKKRKIDEQPP 350
           AS +G       NKQRFGLVDMSCSSNG  +NVD +VSSPETA+KKRKIDEQ P
Sbjct: 301 ASWKGQRKEWKNNKQRFGLVDMSCSSNGGNRNVDTMVSSPETASKKRKIDEQHP 347

[Close]

BLAST of Carg26299 vs. TrEMBL
Match: tr|A0A1S3BU65|A0A1S3BU65_CUCME (cyclin-D3-3-like OS=Cucumis melo OX=3656 GN=LOC103493575 PE=3 SV=1)

HSP 1 Score: 540.8 bits (1392), Expect = 2.2e-150
Identity = 278/353 (78.75%), Postives = 306/353 (86.69%), Query Frame = 0


Query: 1   MRNYRMAKRHCYPLSIAHSISGHQNGSLFLDSLYCLEEEEEIGDGHSQPKIEAFSINVNV 60
           MRNYRMAK HCYP   + SIS H N SL LDSLYC E+E E G   SQPK + FSI++N+
Sbjct: 1   MRNYRMAKPHCYP---SLSISTHHNTSLLLDSLYCFEDEIEDGHSQSQPKFQPFSIDLNI 60

Query: 61  DSPNSVFLSDRDFLWEDEELVSLFSKENRNKLHDALPHNPSLAAARSDAVEWILKVNAHY 120
           +SPNSVFLSD    WED+EL SLFSKENRNKLH+ALPHNPSLAAARS AV+WILKVN+H+
Sbjct: 61  NSPNSVFLSD----WEDDELASLFSKENRNKLHNALPHNPSLAAARSKAVDWILKVNSHH 120

Query: 121 SFTALTAVLAVDYVDRFLSSPHFQIDKPWMTHLTAIACLSLAAKVEETEVPLLLDLQVEE 180
           SFTA TAVLAVDYVDRFLS+PHF I+KPWMTHLTAIA LSLAAKVEET+VPLLLDLQVEE
Sbjct: 121 SFTAHTAVLAVDYVDRFLSTPHFHIEKPWMTHLTAIASLSLAAKVEETQVPLLLDLQVEE 180

Query: 181 NGYFFEAKTIKRMEILVLSTLLWRMNPVNPLSFLDYIVRRLGFKDQLCSEFLCKCERLLL 240
           N YFFEAKTI RMEILVLSTLLWRMNPVNPLSFLDYIVRRLGFKDQLCSE LCKCE+LLL
Sbjct: 181 NEYFFEAKTITRMEILVLSTLLWRMNPVNPLSFLDYIVRRLGFKDQLCSELLCKCEQLLL 240

Query: 241 SVILDSRFVCFLPSVIASAIIFQVINDKEPHVAAKFHDQLLGFLQIDKNKVEDCSQFIIE 300
           SVI D RFVCF PSVIA+AIIFQVIND EPH+AAK+H QL+GFLQIDK+K+E+CS+FI+E
Sbjct: 241 SVIKDCRFVCFRPSVIATAIIFQVINDIEPHLAAKYHSQLMGFLQIDKDKMEECSRFILE 300

Query: 301 ASPRGH------TNKQRFGLVDMSCSSNGRTQNVDRVVSSPETATKKRKIDEQ 348
           AS +G        NK+RFGLVDMSCSSN   +NVD VVSSPETATKKRKIDEQ
Sbjct: 301 ASSKGRQRNEWKNNKRRFGLVDMSCSSNSGNRNVDIVVSSPETATKKRKIDEQ 346

[Close]

BLAST of Carg26299 vs. TrEMBL
Match: tr|A0A061FAI7|A0A061FAI7_THECC (D3-type cyclin isoform 1 OS=Theobroma cacao OX=3641 GN=TCM_033764 PE=3 SV=1)

HSP 1 Score: 344.4 bits (882), Expect = 3.1e-91
Identity = 185/342 (54.09%), Postives = 242/342 (70.76%), Query Frame = 0


Query: 23  HQNGSLFLDSLYCLEE--EEEIGDGHSQPKIEAFSINVNVDSPNSV-FLSDRDFLWEDEE 82
           HQN +  +D+LYC EE  +EE+G+ H     E    N  ++  N    L ++D  WED+E
Sbjct: 5   HQNSTFVVDALYCSEENWDEEVGEDHFLEVEEESCYNNGINKSNPFPILLEQDLFWEDDE 64

Query: 83  LVSLFSKENRNKLHDALPHNPSLAAARSDAVEWILKVNAHYSFTALTAVLAVDYVDRFLS 142
           L SL SKE +N+L+D+L  N + A AR +AVEW+LKVNAHYSF+ALTAVLAV+Y+DRFL 
Sbjct: 65  LSSLLSKEEQNQLYDSLQTNGNPAGARREAVEWMLKVNAHYSFSALTAVLAVNYLDRFLF 124

Query: 143 SPHFQIDKPWMTHLTAIACLSLAAKVEETEVPLLLDLQVEENGYFFEAKTIKRMEILVLS 202
           +  FQ +KPWM+ L A+ACLSLAAKVEET+VPLLLDLQVEEN Y FEAK I+RME+LVLS
Sbjct: 125 NFRFQNEKPWMSQLAAVACLSLAAKVEETQVPLLLDLQVEENRYVFEAKAIQRMEVLVLS 184

Query: 203 TLLWRMNPVNPLSFLDYIVRRLGFKDQLCSEFLCKCERLLLSVILDSRFVCFLPSVIASA 262
           TL W+MNPV PLSFLDYI RRLG KD LC EFL +C R+LLSVI DSRF+C+LPSV+A+A
Sbjct: 185 TLQWKMNPVTPLSFLDYISRRLGLKDHLCWEFLRRCGRILLSVISDSRFMCYLPSVMATA 244

Query: 263 IIFQVINDKEPHVAAKFHDQLLGFLQIDKNKVEDCSQFIIEASPR---GHTNKQRF---- 322
            +  V++  EP++  ++ +QLLG L IDK KV+ C + IIE + R     +NK+RF    
Sbjct: 245 TMLHVVDSVEPNLRVEYQNQLLGILGIDKEKVDKCCKLIIELATRVQGNQSNKRRFSSIP 304

Query: 323 ----GLVDMSCSSNGRTQN---VDRVVSSPETATKKRKIDEQ 348
               G++D+S SS+    +      V SSPE  +KK +  ++
Sbjct: 305 GSPNGVMDLSFSSDSSNDSWAAASSVSSSPEPVSKKSRSQQE 346

[Close]

BLAST of Carg26299 vs. TrEMBL
Match: tr|A0A2K2BHQ7|A0A2K2BHQ7_POPTR (Uncharacterized protein OS=Populus trichocarpa OX=3694 GN=POPTR_002G123000v3 PE=3 SV=1)

HSP 1 Score: 342.4 bits (877), Expect = 1.2e-90
Identity = 184/351 (52.42%), Postives = 251/351 (71.51%), Query Frame = 0


Query: 12  YPLSIAHSISGHQNGSLFLDSLYCLEE--EEEIGDGHSQPKIEA---FSINVNVDSPNSV 71
           Y   I+      QN +   DSLYC EE  E+E+ + + Q +++    +SI+ N  +   V
Sbjct: 5   YNPEISEQQQYQQNPTFLYDSLYCSEENWEKEVREDYFQDEVKGEYFYSIDSNKRNTFPV 64

Query: 72  FLSDRDFLWEDEELVSLFSKENRNKLHDALPHNPSLAAARSDAVEWILKVNAHYSFTALT 131
           F+  +D  WE+EEL SLF+KE +N+L+  L  NPSLA AR +AVEWILKVN HYSF+A+T
Sbjct: 65  FV-QQDLSWEEEELSSLFAKEEQNQLYKILEINPSLARARCEAVEWILKVNVHYSFSAVT 124

Query: 132 AVLAVDYVDRFLSSPHFQIDKPWMTHLTAIACLSLAAKVEETEVPLLLDLQVEENGYFFE 191
           AVLAV+Y+DRFL S H + DKPWM  L A+ACLSLAAKVEET+VPLLLD QVE++ Y FE
Sbjct: 125 AVLAVNYLDRFLLSVHLEKDKPWMAQLAAVACLSLAAKVEETQVPLLLDFQVEDSKYVFE 184

Query: 192 AKTIKRMEILVLSTLLWRMNPVNPLSFLDYIVRRLGFKDQLCSEFLCKCERLLLSVILDS 251
           AKTI+RMEILVLSTL W+MNP+ P+SFLDYI+RRLG KD LC EFL +CER++LSV+ DS
Sbjct: 185 AKTIQRMEILVLSTLKWKMNPITPISFLDYIIRRLGLKDYLCLEFLKRCERIVLSVVPDS 244

Query: 252 RFVCFLPSVIASAIIFQVINDKEPHVAAKFHDQLLGFLQIDKNKVEDCSQFIIEASPRGH 311
           R + ++PSV+A+A++  +I+  EP +AA++  QLLG L IDK+ VEDCS+ ++E +PR H
Sbjct: 245 RSMLYVPSVMATAVMLYIIDGVEPSLAAEYQSQLLGILGIDKDMVEDCSKLVMELAPRDH 304

Query: 312 ---TNKQRF--------GLVDMSCSSNGRTQN---VDRVVSSPETATKKRK 344
              ++K+++        G++D+S SS+    +   V  V SSPE  +KK +
Sbjct: 305 FKFSSKRKYSSIPGSPNGVIDVSFSSDSSNYSWSVVSSVSSSPEPLSKKTR 354

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BLAST of Carg26299 vs. TrEMBL
Match: tr|A0A0D2NAC1|A0A0D2NAC1_GOSRA (Uncharacterized protein OS=Gossypium raimondii OX=29730 GN=B456_005G101100 PE=3 SV=1)

HSP 1 Score: 336.7 bits (862), Expect = 6.4e-89
Identity = 183/340 (53.82%), Postives = 240/340 (70.59%), Query Frame = 0


Query: 23  HQNGSLFLDSLYCLEEEEEIGDGHSQPKIEAFSINVNVDSPNSVFLSDRDFLWEDEELVS 82
           HQ+ S  LD+LYC EE  E  D   +      + N N  +P  + L ++D  WED+EL S
Sbjct: 5   HQHSSFVLDALYCSEENWE-EDQDERCFNNGINDNDNQLNPFPILL-EQDLFWEDDELSS 64

Query: 83  LFSKENRNKLHDALPHNPSLAAARSDAVEWILKVNAHYSFTALTAVLAVDYVDRFLSSPH 142
           LF+KE RN+L+D+L  N +LA AR +AVEW+LKV+AHYSF+ALTA+LAV+Y+DRFL S  
Sbjct: 65  LFTKEERNQLYDSLQTNGNLAGARREAVEWVLKVSAHYSFSALTALLAVNYLDRFLFSFR 124

Query: 143 FQIDKPWMTHLTAIACLSLAAKVEETEVPLLLDLQVEENGYFFEAKTIKRMEILVLSTLL 202
           FQ +KPWMT L A+ACLSLAAKVEET+VPLLLDLQVEE  Y FEAKTI+RMEILVLS++ 
Sbjct: 125 FQSEKPWMTQLAAVACLSLAAKVEETQVPLLLDLQVEETRYVFEAKTIQRMEILVLSSVQ 184

Query: 203 WRMNPVNPLSFLDYIVRRLGFKDQLCSEFLCKCERLLLSVILDSRFVCFLPSVIASAIIF 262
           W+MNPV P SFLDYI RRLG KD LC EFL +C R+LLS+I DSRF+C+LPSV+A+A + 
Sbjct: 185 WKMNPVTPFSFLDYITRRLGLKDHLCWEFLRRCHRILLSLIADSRFMCYLPSVMATATML 244

Query: 263 QVINDKEPHVAAKFHDQLLGFLQIDKNKVEDCSQFIIEASPR---GHTNKQRF------- 322
            V++  EP++  ++H+QLLG L IDK KV +C + I+E + R     +NK+RF       
Sbjct: 245 HVVDSVEPNLRVEYHNQLLGILGIDKEKVNECCELIMEWATRVEGNQSNKRRFSSIPGSP 304

Query: 323 -GLVDMSCSSNGRTQ-----NVDRVVSSPETATKKRKIDE 347
            G++D+S SS+         +   V SSPE  +KK +  +
Sbjct: 305 NGVMDVSFSSDSSNDSWAVASSASVSSSPEPMSKKTRTQQ 342

The following BLAST results are available for this feature:

BLAST of Carg26299 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022936814.1	1.6e-195	98.85	cyclin-D3-3-like [Cucurbita moschata]	[more]
XP_023536077.1	4.5e-195	98.85	cyclin-D3-1-like [Cucurbita pepo subsp. pepo]	[more]
XP_022977063.1	9.4e-193	97.42	cyclin-D3-1-like [Cucurbita maxima]	[more]
XP_004141274.1	3.1e-151	78.25	PREDICTED: cyclin-D3-2-like [Cucumis sativus] >KGN55234.1 hypothetical protein C...	[more]
XP_022135319.1	1.2e-150	80.06	cyclin-D3-1-like [Momordica charantia] >XP_022135326.1 cyclin-D3-1-like [Momordi...	[more]

BLAST of Carg26299 vs. TAIR10


Match Name	E-value	Identity	Description
AT3G50070.1	8.8e-68	45.56	CYCLIN D3;3	[more]
AT5G67260.1	5.7e-67	46.23	CYCLIN D3;2	[more]
AT4G34160.1	3.6e-61	53.85	CYCLIN D3;1	[more]
AT1G70210.1	3.2e-33	46.67	CYCLIN D1;1	[more]
AT2G22490.2	7.1e-33	44.72	Cyclin D2;1	[more]

BLAST of Carg26299 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|Q9SN11\|CCD33_ARATH	1.6e-66	45.56	Cyclin-D3-3 OS=Arabidopsis thaliana OX=3702 GN=CYCD3-3 PE=2 SV=1	[more]
sp\|Q9FGQ7\|CCD32_ARATH	1.0e-65	46.23	Cyclin-D3-2 OS=Arabidopsis thaliana OX=3702 GN=CYCD3-2 PE=1 SV=1	[more]
sp\|P42753\|CCD31_ARATH	6.5e-60	53.85	Cyclin-D3-1 OS=Arabidopsis thaliana OX=3702 GN=CYCD3-1 PE=1 SV=3	[more]
sp\|Q6YXH8\|CCD41_ORYSJ	4.1e-38	46.63	Cyclin-D4-1 OS=Oryza sativa subsp. japonica OX=39947 GN=CYCD4-1 PE=2 SV=2	[more]
sp\|Q10K98\|CCD23_ORYSJ	3.2e-35	35.05	Putative cyclin-D2-3 OS=Oryza sativa subsp. japonica OX=39947 GN=CYCD2-3 PE=3 SV...	[more]

BLAST of Carg26299 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A0A0L2H1\|A0A0A0L2H1_CUCSA	2.0e-151	78.25	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G641660 PE=3 SV=1	[more]
tr\|A0A1S3BU65\|A0A1S3BU65_CUCME	2.2e-150	78.75	cyclin-D3-3-like OS=Cucumis melo OX=3656 GN=LOC103493575 PE=3 SV=1	[more]
tr\|A0A061FAI7\|A0A061FAI7_THECC	3.1e-91	54.09	D3-type cyclin isoform 1 OS=Theobroma cacao OX=3641 GN=TCM_033764 PE=3 SV=1	[more]
tr\|A0A2K2BHQ7\|A0A2K2BHQ7_POPTR	1.2e-90	52.42	Uncharacterized protein OS=Populus trichocarpa OX=3694 GN=POPTR_002G123000v3 PE=...	[more]
tr\|A0A0D2NAC1\|A0A0D2NAC1_GOSRA	6.4e-89	53.82	Uncharacterized protein OS=Gossypium raimondii OX=29730 GN=B456_005G101100 PE=3 ...	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Cellular Component**
Term	Definition
GO:0005634	nucleus

Vocabulary: **INTERPRO**
Term	Definition
IPR036915	Cyclin-like_sf
IPR039361	Cyclin
IPR006671	Cyclin_N
IPR013763	Cyclin-like
IPR004367	Cyclin_C-dom

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005634	nucleus
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg26299-RA	Carg26299-RA	mRNA

InterPro

Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR004367	Cyclin, C-terminal domain	SMART	SM01332	Cyclin_C_2	coord: 208..326 e-value: 1.1E-6 score: 38.2
IPR004367	Cyclin, C-terminal domain	PFAM	PF02984	Cyclin_C	coord: 208..309 e-value: 1.1E-14 score: 54.4
IPR013763	Cyclin-like	SMART	SM00385	cyclin_7	coord: 111..199 e-value: 1.4E-10 score: 51.2
IPR013763	Cyclin-like	CDD	cd00043	CYCLIN	coord: 106..198 e-value: 2.17069E-12 score: 61.1004
None	No IPR available	GENE3D	G3DSA:1.10.472.10		coord: 207..296 e-value: 1.9E-46 score: 160.2
None	No IPR available	GENE3D	G3DSA:1.10.472.10		coord: 103..206 e-value: 1.9E-46 score: 160.2
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 325..349
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 335..349
None	No IPR available	PANTHER	PTHR10177:SF242	SUBFAMILY NOT NAMED	coord: 26..308
IPR006671	Cyclin, N-terminal	PFAM	PF00134	Cyclin_N	coord: 94..206 e-value: 5.2E-26 score: 90.8
IPR006671	Cyclin, N-terminal	PROSITE	PS00292	CYCLINS	coord: 106..137
IPR039361	Cyclin	PANTHER	PTHR10177	CYCLINE	coord: 26..308
IPR036915	Cyclin-like superfamily	SUPERFAMILY	SSF47954	Cyclin-like	coord: 209..302
IPR036915	Cyclin-like superfamily	SUPERFAMILY	SSF47954	Cyclin-like	coord: 75..206

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Carg26299	Cla020636	Watermelon (97103) v1	carwmB0790
Carg26299	Csa4G641660	Cucumber (Chinese Long) v2	carcuB0808
Carg26299	MELO3C016786	Melon (DHL92) v3.5.1	carmeB0787
Carg26299	ClCG05G020230	Watermelon (Charleston Gray)	carwcgB0765
Carg26299	CSPI04G24470	Wild cucumber (PI 183967)	carcpiB0827
Carg26299	Cucsa.352530	Cucumber (Gy14) v1	carcgyB0903
Carg26299	CmaCh01G018130	Cucurbita maxima (Rimu)	carcmaB1098
Carg26299	CmaCh09G002610	Cucurbita maxima (Rimu)	carcmaB1097
Carg26299	CmoCh01G018690	Cucurbita moschata (Rifu)	carcmoB1068
Carg26299	CmoCh09G002540	Cucurbita moschata (Rifu)	carcmoB1067
Carg26299	Lsi04G015200	Bottle gourd (USVL1VR-Ls)	carlsiB728
Carg26299	Cp4.1LG02g06870	Cucurbita pepo (Zucchini)	carcpeB1107
Carg26299	Cp4.1LG06g01640	Cucurbita pepo (Zucchini)	carcpeB1108
Carg26299	CsGy4G022730	Cucumber (Gy14) v2	carcgybB0783
Carg26299	MELO3C016786.2	Melon (DHL92) v3.6.1	carmedB0799
Carg26299	CsaV3_4G034710	Cucumber (Chinese Long) v3	carcucB0831
Carg26299	Cla97C05G101940	Watermelon (97103) v2	carwmbB0828
Carg26299	Bhi09G002696	Wax gourd	carwgoB0926

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
Carg26299	Carg10622	Silver-seed gourd	carcarB606

The following block(s) are covering this gene:

None