Carg26187 (gene) Silver-seed gourd

NameCarg26187
Typegene
OrganismCucurbita argyrosperma (Silver-seed gourd)
DescriptionMND1-interacting protein 1
LocationCucurbita_argyrosperma_scaffold_219 : 53232 .. 54059 (-)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGGTTGCACGGTGAGAGATAAGCATGTTCGTACGAATCGGAGGTCTCGATCGGTAAAACCCGAATTCGATCCGTGTTGTCACCAAGAACGAGCTTCACTTCCCAAATCTGTACTTGAATCGGGTTCGAAGCCGTTGGATTATCATATAGGGCTTGACGATTCGAACCAGGATAACGCTGTTACCTCGAACTGTAATTCCGGTTCTAGCTTGGATGATCTTGGATGGGGTTACTGTACGGAGGAGCAATTGGAGGAAATTTTGATGAAGAATTTGCAATTTGTTTATACTGAAGCTATTTCGAAGCTTGTTGCATTGGGTTATGATGAGGATGCTGCGATGAGGGCGATTTTGCAAAATGGGCATTGCTATGGTACCATGGATGTTCTAACAAATGTGCTGCATAATTCGCTGTCGTTTTTGAATGGTAACAACAACTCTGATAGTGCTAGCAGCGAGGCTGTTGCAGCTGCTGCTGCCGCTTCTGCTGATGGTGTTGGTATTGGAACCATCGGTATTGGACCCATCGGTAATGGTAATGGTAATGGTATTGCTATTGATAATGTTAATGCTAATGCTAATTTGGTTGTGGATGATCCTGAGCCTGCGTTCTCTGATATAAGGCAATTGCAGGAGTATTCTTTGGCTGGTATGGTATGTTTGTTGCAACAAGTTAGGCCACATTTGACTAAAGGAGATGCTATGTGGTGTTTGCTTATGAGTGATCTTCATGTCGGTCGGGCAAGCACCATGGAAATTCCGGTGCTTCCTTCAGCACCAAGTAATGTTAATGGGTCAGCATCTGGTGCCAATGGTGAGAATGTTTAG

mRNA sequence

ATGGGTTGCACGGTGAGAGATAAGCATGTTCGTACGAATCGGAGGTCTCGATCGGTAAAACCCGAATTCGATCCGTGTTGTCACCAAGAACGAGCTTCACTTCCCAAATCTGTACTTGAATCGGGTTCGAAGCCGTTGGATTATCATATAGGGCTTGACGATTCGAACCAGGATAACGCTGTTACCTCGAACTGTAATTCCGGTTCTAGCTTGGATGATCTTGGATGGGGTTACTGTACGGAGGAGCAATTGGAGGAAATTTTGATGAAGAATTTGCAATTTGTTTATACTGAAGCTATTTCGAAGCTTGTTGCATTGGGTTATGATGAGGATGCTGCGATGAGGGCGATTTTGCAAAATGGGCATTGCTATGGTACCATGGATGTTCTAACAAATGTGCTGCATAATTCGCTGTCGTTTTTGAATGGTAACAACAACTCTGATAGTGCTAGCAGCGAGGCTGTTGCAGCTGCTGCTGCCGCTTCTGCTGATGGTGTTGGTATTGGAACCATCGGTATTGGACCCATCGGTAATGGTAATGGTAATGGTATTGCTATTGATAATGTTAATGCTAATGCTAATTTGGTTGTGGATGATCCTGAGCCTGCGTTCTCTGATATAAGGCAATTGCAGGAGTATTCTTTGGCTGGTATGGTATGTTTGTTGCAACAAGTTAGGCCACATTTGACTAAAGGAGATGCTATGTGGTGTTTGCTTATGAGTGATCTTCATGTCGGTCGGGCAAGCACCATGGAAATTCCGGTGCTTCCTTCAGCACCAAGTAATGTTAATGGGTCAGCATCTGGTGCCAATGGTGAGAATGTTTAG

Coding sequence (CDS)

ATGGGTTGCACGGTGAGAGATAAGCATGTTCGTACGAATCGGAGGTCTCGATCGGTAAAACCCGAATTCGATCCGTGTTGTCACCAAGAACGAGCTTCACTTCCCAAATCTGTACTTGAATCGGGTTCGAAGCCGTTGGATTATCATATAGGGCTTGACGATTCGAACCAGGATAACGCTGTTACCTCGAACTGTAATTCCGGTTCTAGCTTGGATGATCTTGGATGGGGTTACTGTACGGAGGAGCAATTGGAGGAAATTTTGATGAAGAATTTGCAATTTGTTTATACTGAAGCTATTTCGAAGCTTGTTGCATTGGGTTATGATGAGGATGCTGCGATGAGGGCGATTTTGCAAAATGGGCATTGCTATGGTACCATGGATGTTCTAACAAATGTGCTGCATAATTCGCTGTCGTTTTTGAATGGTAACAACAACTCTGATAGTGCTAGCAGCGAGGCTGTTGCAGCTGCTGCTGCCGCTTCTGCTGATGGTGTTGGTATTGGAACCATCGGTATTGGACCCATCGGTAATGGTAATGGTAATGGTATTGCTATTGATAATGTTAATGCTAATGCTAATTTGGTTGTGGATGATCCTGAGCCTGCGTTCTCTGATATAAGGCAATTGCAGGAGTATTCTTTGGCTGGTATGGTATGTTTGTTGCAACAAGTTAGGCCACATTTGACTAAAGGAGATGCTATGTGGTGTTTGCTTATGAGTGATCTTCATGTCGGTCGGGCAAGCACCATGGAAATTCCGGTGCTTCCTTCAGCACCAAGTAATGTTAATGGGTCAGCATCTGGTGCCAATGGTGAGAATGTTTAG

Protein sequence

MGCTVRDKHVRTNRRSRSVKPEFDPCCHQERASLPKSVLESGSKPLDYHIGLDDSNQDNAVTSNCNSGSSLDDLGWGYCTEEQLEEILMKNLQFVYTEAISKLVALGYDEDAAMRAILQNGHCYGTMDVLTNVLHNSLSFLNGNNNSDSASSEAVAAAAAASADGVGIGTIGIGPIGNGNGNGIAIDNVNANANLVVDDPEPAFSDIRQLQEYSLAGMVCLLQQVRPHLTKGDAMWCLLMSDLHVGRASTMEIPVLPSAPSNVNGSASGANGENV
BLAST of Carg26187 vs. NCBI nr
Match: XP_022923356.1 (MND1-interacting protein 1 [Cucurbita moschata])

HSP 1 Score: 424.1 bits (1089), Expect = 3.7e-115
Identity = 272/279 (97.49%), Postives = 274/279 (98.21%), Query Frame = 0

Query: 1   MGCTVRDKHVRTNRRSRSVKPEFDPCCHQERASLPKSVLESGSKPLDYHIGLDDSNQDNA 60
           MGCTVRDKHVRTNRRSRSVKPEFDPCCHQERASLPKSVLESGSKPLDYHIGLDDSN+DNA
Sbjct: 1   MGCTVRDKHVRTNRRSRSVKPEFDPCCHQERASLPKSVLESGSKPLDYHIGLDDSNEDNA 60

Query: 61  VTSNCNSGSSLDDLGWGYCTEEQLEEILMKNLQFVYTEAISKLVALGYDEDAAMRAILQN 120
           VTSNCNSGSSLDDLGWGYCTEEQLEEILMKNLQFVYTEA+SKLVALGYDEDAAMRAILQN
Sbjct: 61  VTSNCNSGSSLDDLGWGYCTEEQLEEILMKNLQFVYTEALSKLVALGYDEDAAMRAILQN 120

Query: 121 GHCYGTMDVLTNVLHNSLSFLNG----XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 180
           GHCYGTMDVLTNVLHNSLSFLNG    XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 121 GHCYGTMDVLTNVLHNSLSFLNGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 180

Query: 181 XXXXXXXXXXXXXXXXXXXXVDDPEPAFSDIRQLQEYSLAGMVCLLQQVRPHLTKGDAMW 240
           XXXXXXXXXXXXXXXXXXXXVDDPEPAFSDIRQLQEYSLAGMVCLLQQVRPHLTKGDAMW
Sbjct: 181 XXXXXXXXXXXXXXXXXXXXVDDPEPAFSDIRQLQEYSLAGMVCLLQQVRPHLTKGDAMW 240

Query: 241 CLLMSDLHVGRASTMEIPVLPSAPSNVNGSASGANGENV 276
           CLLMSDLHVGRASTMEIPVLPSAPSNVNG ASGANGENV
Sbjct: 241 CLLMSDLHVGRASTMEIPVLPSAPSNVNGPASGANGENV 279

BLAST of Carg26187 vs. NCBI nr
Match: XP_023552320.1 (MND1-interacting protein 1-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 422.2 bits (1084), Expect = 1.4e-114
Identity = 265/275 (96.36%), Postives = 266/275 (96.73%), Query Frame = 0

Query: 1   MGCTVRDKHVRTNRRSRSVKPEFDPCCHQERASLPKSVLESGSKPLDYHIGLDDSNQDNA 60
           MGCTVRDKHVRTNRR RSVKPEFDPCCHQERASLPKSVLESGSKPLDYHIGLDDSNQDNA
Sbjct: 1   MGCTVRDKHVRTNRRPRSVKPEFDPCCHQERASLPKSVLESGSKPLDYHIGLDDSNQDNA 60

Query: 61  VTSNCNSGSSLDDLGWGYCTEEQLEEILMKNLQFVYTEAISKLVALGYDEDAAMRAILQN 120
           VTSNCNSGSSLDDLGWGYCTEEQLEEILMKNL FVYTEA+SKLVALGYDED AMRAILQN
Sbjct: 61  VTSNCNSGSSLDDLGWGYCTEEQLEEILMKNLHFVYTEAVSKLVALGYDEDTAMRAILQN 120

Query: 121 GHCYGTMDVLTNVLHNSLSFLNGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 180
           GHCYGTMDVLTNVLHNSLSFLNG   XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 121 GHCYGTMDVLTNVLHNSLSFLNG---XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 180

Query: 181 XXXXXXXXXXXXXXXXVDDPEPAFSDIRQLQEYSLAGMVCLLQQVRPHLTKGDAMWCLLM 240
           XXXXXXXXXXXXXX  VDDPEPAFSDIRQLQEYSLAGMVCLLQQVRPHLTKGDAMWCLLM
Sbjct: 181 XXXXXXXXXXXXXXLVVDDPEPAFSDIRQLQEYSLAGMVCLLQQVRPHLTKGDAMWCLLM 240

Query: 241 SDLHVGRASTMEIPVLPSAPSNVNGSASGANGENV 276
           SDLHVGRASTMEIPVLPSAPSN NGSASGANGENV
Sbjct: 241 SDLHVGRASTMEIPVLPSAPSNANGSASGANGENV 272

BLAST of Carg26187 vs. NCBI nr
Match: XP_023007713.1 (MND1-interacting protein 1-like [Cucurbita maxima])

HSP 1 Score: 421.4 bits (1082), Expect = 2.4e-114
Identity = 268/275 (97.45%), Postives = 268/275 (97.45%), Query Frame = 0

Query: 1   MGCTVRDKHVRTNRRSRSVKPEFDPCCHQERASLPKSVLESGSKPLDYHIGLDDSNQDNA 60
           MGCTVRDKHVRTNRR RSVKPEFDPCCHQERASLPKSVLESGSKPLDYHIGLDDSNQDNA
Sbjct: 1   MGCTVRDKHVRTNRRPRSVKPEFDPCCHQERASLPKSVLESGSKPLDYHIGLDDSNQDNA 60

Query: 61  VTSNCNSGSSLDDLGWGYCTEEQLEEILMKNLQFVYTEAISKLVALGYDEDAAMRAILQN 120
           VTSNCNSGSSLDDLGWGYCTEEQLEEILMKNLQFVYTEAISKLVALGYDEDAAMRAILQN
Sbjct: 61  VTSNCNSGSSLDDLGWGYCTEEQLEEILMKNLQFVYTEAISKLVALGYDEDAAMRAILQN 120

Query: 121 GHCYGTMDVLTNVLHNSLSFLNGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 180
           GHCYGTMDVLTNVLHNSLSFLNG XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 121 GHCYGTMDVLTNVLHNSLSFLNG-XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 180

Query: 181 XXXXXXXXXXXXXXXXVDDPEPAFSDIRQLQEYSLAGMVCLLQQVRPHLTKGDAMWCLLM 240
           XXXXXXXXXXXXXX  VDDPEPAFSDIRQLQEYSLAGMVCLLQQVRP LTKGDAMWCLLM
Sbjct: 181 XXXXXXXXXXXXXXLVVDDPEPAFSDIRQLQEYSLAGMVCLLQQVRPQLTKGDAMWCLLM 240

Query: 241 SDLHVGRASTMEIPVLPSAPSNVNGSASGANGENV 276
           SDLHVGRASTMEIPVLPSAPSNVNG ASG NGENV
Sbjct: 241 SDLHVGRASTMEIPVLPSAPSNVNGDASGGNGENV 274

BLAST of Carg26187 vs. NCBI nr
Match: XP_011650349.1 (PREDICTED: MND1-interacting protein 1 [Cucumis sativus])

HSP 1 Score: 389.4 bits (999), Expect = 1.0e-104
Identity = 245/284 (86.27%), Postives = 252/284 (88.73%), Query Frame = 0

Query: 1   MGCTVRDKHVRTNRRSRSVKPEFDPCCHQERASLPKSVLESGSKPLDYHIGLDDSNQDNA 60
           MGC+VRDKHVRTNRR RSVK EFDPCCHQERASLPKSVLE GSKPLDYHIGLDDSNQ NA
Sbjct: 1   MGCSVRDKHVRTNRRPRSVKSEFDPCCHQERASLPKSVLELGSKPLDYHIGLDDSNQINA 60

Query: 61  VTSNCNSGSSLDDLGWGYCTEEQLEEILMKNLQFVYTEAISKLVALGYDEDAAMRAILQN 120
           VTSN NS S+LDD GWGYCTE+QLEEILMKNLQFVYTEAISKLVALGYDED +M AIL N
Sbjct: 61  VTSNSNSSSNLDDGGWGYCTEDQLEEILMKNLQFVYTEAISKLVALGYDEDTSMNAILHN 120

Query: 121 GHCYGTMDVLTNVLHNSLSFLNG---------XXXXXXXXXXXXXXXXXXXXXXXXXXXX 180
           GHCYG+MDVLTNVLHNSLSFLNG                   XXXXXXXXXXXXXXXXXX
Sbjct: 121 GHCYGSMDVLTNVLHNSLSFLNGDINSDSLNSEVVAAVEAVEXXXXXXXXXXXXXXXXXX 180

Query: 181 XXXXXXXXXXXXXXXXXXXXXXXXXVDDPEPAFSDIRQLQEYSLAGMVCLLQQVRPHLTK 240
           XXXXXXXXXXXXXXXXXXXXXXXX VDDPEP FSD+RQLQEYSLAGMVCLLQQVRPHLTK
Sbjct: 181 XXXXXXXXXXXXXXXXXXXXXXXXVVDDPEPVFSDLRQLQEYSLAGMVCLLQQVRPHLTK 240

Query: 241 GDAMWCLLMSDLHVGRASTMEIPVLPSAPSNVNGSASGANGENV 276
           GDAMWCLLMSDLHVGRAS ME+PVLPSAPSNVNGSASGANGENV
Sbjct: 241 GDAMWCLLMSDLHVGRASAMEVPVLPSAPSNVNGSASGANGENV 284

BLAST of Carg26187 vs. NCBI nr
Match: XP_008448707.1 (PREDICTED: MND1-interacting protein 1 [Cucumis melo])

HSP 1 Score: 388.3 bits (996), Expect = 2.2e-104
Identity = 242/281 (86.12%), Postives = 248/281 (88.26%), Query Frame = 0

Query: 1   MGCTVRDKHVRTNRRSRSVKPEFDPCCHQERASLPKSVLESGSKPLDYHIGLDDSNQDNA 60
           MGC+VRDKHVRTNRR RSVK EFDPCCHQERASL KSVLE GSKPLDYHIGLDDSNQ NA
Sbjct: 1   MGCSVRDKHVRTNRRPRSVKSEFDPCCHQERASLHKSVLELGSKPLDYHIGLDDSNQINA 60

Query: 61  VTSNCNSGSSLDDLGWGYCTEEQLEEILMKNLQFVYTEAISKLVALGYDEDAAMRAILQN 120
           VTSN NS S+LDD GWGYCTE+QLEEILMKNLQFVYTEAISKLVALGYDED AM AIL N
Sbjct: 61  VTSNSNSSSNLDDGGWGYCTEDQLEEILMKNLQFVYTEAISKLVALGYDEDTAMNAILHN 120

Query: 121 GHCYGTMDVLTNVLHNSLSFLNG------XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 180
           GHCYG+MDVLTNVLHNSLSFLNG                   XXXXXXXXXXXXXXXXXX
Sbjct: 121 GHCYGSMDVLTNVLHNSLSFLNGDNNSDNLNSEVVAAVEAVEXXXXXXXXXXXXXXXXXX 180

Query: 181 XXXXXXXXXXXXXXXXXXXXXXVDDPEPAFSDIRQLQEYSLAGMVCLLQQVRPHLTKGDA 240
           XXXXXXXXXXXXXXXXXXXXX VDDPEP FSD+RQLQEYSLAGMVCLLQQVRPHLTKGDA
Sbjct: 181 XXXXXXXXXXXXXXXXXXXXXVVDDPEPVFSDLRQLQEYSLAGMVCLLQQVRPHLTKGDA 240

Query: 241 MWCLLMSDLHVGRASTMEIPVLPSAPSNVNGSASGANGENV 276
           MWCLLMSDLHVGRAS ME+PVLPSAPSNVNGSASGANGENV
Sbjct: 241 MWCLLMSDLHVGRASAMEVPVLPSAPSNVNGSASGANGENV 281

BLAST of Carg26187 vs. TAIR10
Match: AT2G35330.1 (RING/U-box superfamily protein)

HSP 1 Score: 252.7 bits (644), Expect = 2.6e-67
Identity = 141/275 (51.27%), Postives = 174/275 (63.27%), Query Frame = 0

Query: 1   MGCTVRDKHVRTNRRSRSVKPEFDPCCHQERASLPKSVLESGSKPLDYHIGLDDSNQDNA 60
           MGCTVR+KHVR NR++RSVKPEFDPCC  +R +L KS++ES  K L YH GL DS  +  
Sbjct: 28  MGCTVREKHVRPNRKTRSVKPEFDPCCLLDRTALSKSIVESSLKHLVYHPGLLDSCPE-- 87

Query: 61  VTSNCNSGSSLDDLGWGYCTEEQLEEILMKNLQFVYTEAISKLVALGYDEDAAMRAILQN 120
             SN  SGS  D+ GWGYCTEEQLE+IL+K+L+++Y EAISKLV  GYDED A+RA+L N
Sbjct: 88  --SN-PSGSFEDNNGWGYCTEEQLEDILLKHLEYLYNEAISKLVGSGYDEDVALRAVLSN 147

Query: 121 GHCYGTMDVLTNVLHNSLSFLNGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 180
           G+CYG MDV+TN+LHNSL++L                                       
Sbjct: 148 GYCYGGMDVMTNILHNSLAYLKSNTGEGSNVNNE-------------------------- 207

Query: 181 XXXXXXXXXXXXXXXXVDDPEPAFSDIRQLQEYSLAGMVCLLQQVRPHLTKGDAMWCLLM 240
                            D  E  F+D+RQL+EYSLAGMV LLQQV+P+L+KGDAMWCLLM
Sbjct: 208 -----------------DQSETVFTDLRQLEEYSLAGMVYLLQQVKPNLSKGDAMWCLLM 254

Query: 241 SDLHVGRASTMEIPVLPSAPSN---VNGSASGANG 273
           S+LHVGRASTM+IP      S+   V G++S  NG
Sbjct: 268 SELHVGRASTMDIPSSGKGDSSNVGVGGASSTVNG 254

BLAST of Carg26187 vs. TAIR10
Match: AT1G32530.1 (RING/U-box superfamily protein)

HSP 1 Score: 196.1 bits (497), Expect = 2.9e-50
Identity = 126/277 (45.49%), Postives = 169/277 (61.01%), Query Frame = 0

Query: 1   MGCTVRDKHVRTNRRSRSVKPEFD-PCCHQERASLPKSVLESGSKPLDYHIGLDDSNQD- 60
           MGCTVR+KHV+  RR ++     D P C  E+ ++ +S++E+    L YH GL DS    
Sbjct: 1   MGCTVREKHVKPTRRIKAAAFRSDPPLCWVEKIAMSQSIVEN----LVYHPGLTDSGSVN 60

Query: 61  -NAVTSNCNSGSSLDDLGWGYCTEEQLEEILMKNLQFVYTEAISKLVALGYDEDAAMRAI 120
            N+VT N       ++  W YCTEE LEEIL+K+L+F+Y +A+SKL+ LGY+E  A++A+
Sbjct: 61  LNSVTEN------PEENFWAYCTEEHLEEILLKHLEFLYNQAVSKLLELGYEERVALKAV 120

Query: 121 LQNGHCYGTMDVLTNVLHNSLSFLNGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 180
           L NGHCYG +DVLTN+++NSLS+LN                                   
Sbjct: 121 LSNGHCYGELDVLTNIVNNSLSYLNS---------------------------------- 180

Query: 181 XXXXXXXXXXXXXXXXXXXVDDPEPAFSDIRQLQEYSLAGMVCLLQQVRPHLTKGDAMWC 240
                   XXXXXXXXXXX    E  F+D+R L+EYSLAGM+ LLQQV+P+L+KGDAMWC
Sbjct: 181 --------XXXXXXXXXXXXXXTETGFTDLRDLEEYSLAGMIYLLQQVKPNLSKGDAMWC 225

Query: 241 LLMSDLHVGRASTMEIPVLPSA-----PSNVNGSASG 270
           LLMS+LHVGRAST+++P   S+      SNV    +G
Sbjct: 241 LLMSELHVGRASTLDVPTNRSSCCTKEDSNVEDVGTG 225

BLAST of Carg26187 vs. TAIR10
Match: AT4G03000.1 (RING/U-box superfamily protein)

HSP 1 Score: 61.2 bits (147), Expect = 1.1e-09
Identity = 49/203 (24.14%), Postives = 86/203 (42.36%), Query Frame = 0

Query: 72  DDLGWGYCTEEQLEEILMKNLQFVYTEAISKLVALGYDEDAAMRAILQNGHCYGTMDVLT 131
           D +GW       LE +L  NL  ++  A+++++  GY ED  ++AI  +    G  D+++
Sbjct: 82  DSVGWDDPFACHLEGLLSSNLLTLFRSAMNQIMDCGYSEDVVLKAISSSRFYCGGTDLVS 141

Query: 132 NVLHNSLSFLNGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 191
           N+++++LSFL                                                  
Sbjct: 142 NIVNDTLSFLKS------------------------------------------------ 201

Query: 192 XXXXXVDDPEPAFSDIRQLQEYSLAGMVCLLQQVRPHLTKGDAMWCLLMSDLHVGRASTM 251
                    +  F D++QL  YSL   + L+++VRP L+  +AMW LL+ DL+V +A  +
Sbjct: 202 -GKKVAGSRDYVFEDLQQLVAYSLVEKISLVREVRPSLSTDEAMWRLLICDLNVLKAFEV 235

Query: 252 EIPVLP-SAPSNVNGSASGANGE 274
           +   L  S+ SN + S+     E
Sbjct: 262 DADGLEGSSVSNASKSSESPVAE 235

BLAST of Carg26187 vs. TAIR10
Match: AT1G03365.1 (RING/U-box superfamily protein)

HSP 1 Score: 58.5 bits (140), Expect = 7.3e-09
Identity = 46/187 (24.60%), Postives = 80/187 (42.78%), Query Frame = 0

Query: 84  LEEILMKNLQFVYTEAISKLVALGYDEDAAMRAILQNGHCYGTMDVLTNVLHNSLSFLNG 143
           LEE+L  NL  ++ + + +L+ LGY +D  ++A+ +     G  ++L+N+++N+LS L  
Sbjct: 97  LEELLSSNLLTLFLDTMKQLIDLGYTDDEVLKAVSRCRLYCGGNNLLSNIVNNTLSALK- 156

Query: 144 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVDDPEPA 203
                                                                    +  
Sbjct: 157 ------------------------------------------------TGDEGAGSGDYV 216

Query: 204 FSDIRQLQEYSLAGMVCLLQQVRPHLTKGDAMWCLLMSDLHVGRASTMEIPVLPSAPSNV 263
           F D++QL  Y+L  M+ L+++VRP L+  +AMW LLM DL+V +A   E   L S+    
Sbjct: 217 FEDLQQLVSYTLVEMISLIKEVRPSLSTVEAMWRLLMCDLNVLQAFEAEGDGLVSSSKLS 234

Query: 264 NGSASGA 271
           +  + GA
Sbjct: 277 DSESLGA 234

BLAST of Carg26187 vs. Swiss-Prot
Match: sp|Q8RX22|MIP1_ARATH (MND1-interacting protein 1 OS=Arabidopsis thaliana OX=3702 GN=MIP1 PE=1 SV=1)

HSP 1 Score: 196.1 bits (497), Expect = 5.3e-49
Identity = 126/277 (45.49%), Postives = 169/277 (61.01%), Query Frame = 0

Query: 1   MGCTVRDKHVRTNRRSRSVKPEFD-PCCHQERASLPKSVLESGSKPLDYHIGLDDSNQD- 60
           MGCTVR+KHV+  RR ++     D P C  E+ ++ +S++E+    L YH GL DS    
Sbjct: 1   MGCTVREKHVKPTRRIKAAAFRSDPPLCWVEKIAMSQSIVEN----LVYHPGLTDSGSVN 60

Query: 61  -NAVTSNCNSGSSLDDLGWGYCTEEQLEEILMKNLQFVYTEAISKLVALGYDEDAAMRAI 120
            N+VT N       ++  W YCTEE LEEIL+K+L+F+Y +A+SKL+ LGY+E  A++A+
Sbjct: 61  LNSVTEN------PEENFWAYCTEEHLEEILLKHLEFLYNQAVSKLLELGYEERVALKAV 120

Query: 121 LQNGHCYGTMDVLTNVLHNSLSFLNGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 180
           L NGHCYG +DVLTN+++NSLS+LN                                   
Sbjct: 121 LSNGHCYGELDVLTNIVNNSLSYLNS---------------------------------- 180

Query: 181 XXXXXXXXXXXXXXXXXXXVDDPEPAFSDIRQLQEYSLAGMVCLLQQVRPHLTKGDAMWC 240
                   XXXXXXXXXXX    E  F+D+R L+EYSLAGM+ LLQQV+P+L+KGDAMWC
Sbjct: 181 --------XXXXXXXXXXXXXXTETGFTDLRDLEEYSLAGMIYLLQQVKPNLSKGDAMWC 225

Query: 241 LLMSDLHVGRASTMEIPVLPSA-----PSNVNGSASG 270
           LLMS+LHVGRAST+++P   S+      SNV    +G
Sbjct: 241 LLMSELHVGRASTLDVPTNRSSCCTKEDSNVEDVGTG 225

BLAST of Carg26187 vs. Swiss-Prot
Match: sp|Q0WPJ7|RF298_ARATH (Putative E3 ubiquitin-protein ligase RF298 OS=Arabidopsis thaliana OX=3702 GN=RF298 PE=2 SV=1)

HSP 1 Score: 61.2 bits (147), Expect = 2.0e-08
Identity = 49/203 (24.14%), Postives = 86/203 (42.36%), Query Frame = 0

Query: 72  DDLGWGYCTEEQLEEILMKNLQFVYTEAISKLVALGYDEDAAMRAILQNGHCYGTMDVLT 131
           D +GW       LE +L  NL  ++  A+++++  GY ED  ++AI  +    G  D+++
Sbjct: 82  DSVGWDDPFACHLEGLLSSNLLTLFRSAMNQIMDCGYSEDVVLKAISSSRFYCGGTDLVS 141

Query: 132 NVLHNSLSFLNGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 191
           N+++++LSFL                                                  
Sbjct: 142 NIVNDTLSFLKS------------------------------------------------ 201

Query: 192 XXXXXVDDPEPAFSDIRQLQEYSLAGMVCLLQQVRPHLTKGDAMWCLLMSDLHVGRASTM 251
                    +  F D++QL  YSL   + L+++VRP L+  +AMW LL+ DL+V +A  +
Sbjct: 202 -GKKVAGSRDYVFEDLQQLVAYSLVEKISLVREVRPSLSTDEAMWRLLICDLNVLKAFEV 235

Query: 252 EIPVLP-SAPSNVNGSASGANGE 274
           +   L  S+ SN + S+     E
Sbjct: 262 DADGLEGSSVSNASKSSESPVAE 235

BLAST of Carg26187 vs. Swiss-Prot
Match: sp|Q9ZVT8|RF4_ARATH (Putative E3 ubiquitin-protein ligase RF4 OS=Arabidopsis thaliana OX=3702 GN=RF4 PE=3 SV=1)

HSP 1 Score: 58.5 bits (140), Expect = 1.3e-07
Identity = 46/187 (24.60%), Postives = 80/187 (42.78%), Query Frame = 0

Query: 84  LEEILMKNLQFVYTEAISKLVALGYDEDAAMRAILQNGHCYGTMDVLTNVLHNSLSFLNG 143
           LEE+L  NL  ++ + + +L+ LGY +D  ++A+ +     G  ++L+N+++N+LS L  
Sbjct: 97  LEELLSSNLLTLFLDTMKQLIDLGYTDDEVLKAVSRCRLYCGGNNLLSNIVNNTLSALK- 156

Query: 144 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVDDPEPA 203
                                                                    +  
Sbjct: 157 ------------------------------------------------TGDEGAGSGDYV 216

Query: 204 FSDIRQLQEYSLAGMVCLLQQVRPHLTKGDAMWCLLMSDLHVGRASTMEIPVLPSAPSNV 263
           F D++QL  Y+L  M+ L+++VRP L+  +AMW LLM DL+V +A   E   L S+    
Sbjct: 217 FEDLQQLVSYTLVEMISLIKEVRPSLSTVEAMWRLLMCDLNVLQAFEAEGDGLVSSSKLS 234

Query: 264 NGSASGA 271
           +  + GA
Sbjct: 277 DSESLGA 234

BLAST of Carg26187 vs. TrEMBL
Match: tr|A0A1S3BJQ6|A0A1S3BJQ6_CUCME (MND1-interacting protein 1 OS=Cucumis melo OX=3656 GN=LOC103490797 PE=4 SV=1)

HSP 1 Score: 388.3 bits (996), Expect = 1.5e-104
Identity = 242/281 (86.12%), Postives = 248/281 (88.26%), Query Frame = 0

Query: 1   MGCTVRDKHVRTNRRSRSVKPEFDPCCHQERASLPKSVLESGSKPLDYHIGLDDSNQDNA 60
           MGC+VRDKHVRTNRR RSVK EFDPCCHQERASL KSVLE GSKPLDYHIGLDDSNQ NA
Sbjct: 1   MGCSVRDKHVRTNRRPRSVKSEFDPCCHQERASLHKSVLELGSKPLDYHIGLDDSNQINA 60

Query: 61  VTSNCNSGSSLDDLGWGYCTEEQLEEILMKNLQFVYTEAISKLVALGYDEDAAMRAILQN 120
           VTSN NS S+LDD GWGYCTE+QLEEILMKNLQFVYTEAISKLVALGYDED AM AIL N
Sbjct: 61  VTSNSNSSSNLDDGGWGYCTEDQLEEILMKNLQFVYTEAISKLVALGYDEDTAMNAILHN 120

Query: 121 GHCYGTMDVLTNVLHNSLSFLNG------XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 180
           GHCYG+MDVLTNVLHNSLSFLNG                   XXXXXXXXXXXXXXXXXX
Sbjct: 121 GHCYGSMDVLTNVLHNSLSFLNGDNNSDNLNSEVVAAVEAVEXXXXXXXXXXXXXXXXXX 180

Query: 181 XXXXXXXXXXXXXXXXXXXXXXVDDPEPAFSDIRQLQEYSLAGMVCLLQQVRPHLTKGDA 240
           XXXXXXXXXXXXXXXXXXXXX VDDPEP FSD+RQLQEYSLAGMVCLLQQVRPHLTKGDA
Sbjct: 181 XXXXXXXXXXXXXXXXXXXXXVVDDPEPVFSDLRQLQEYSLAGMVCLLQQVRPHLTKGDA 240

Query: 241 MWCLLMSDLHVGRASTMEIPVLPSAPSNVNGSASGANGENV 276
           MWCLLMSDLHVGRAS ME+PVLPSAPSNVNGSASGANGENV
Sbjct: 241 MWCLLMSDLHVGRASAMEVPVLPSAPSNVNGSASGANGENV 281

BLAST of Carg26187 vs. TrEMBL
Match: tr|M5WCP8|M5WCP8_PRUPE (Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_5G040000 PE=4 SV=1)

HSP 1 Score: 295.0 bits (754), Expect = 1.7e-76
Identity = 154/279 (55.20%), Postives = 190/279 (68.10%), Query Frame = 0

Query: 1   MGCTVRDKHVRTNRRSRSVKPEFDPCCHQERASLPKSVLESGSKPLDYHIGLDDSNQDNA 60
           MGCTVR+KH+RTNRR RS KP+FD CCH +RAS+ KS+LESG KP ++H+G ++ +  N 
Sbjct: 1   MGCTVREKHIRTNRRPRSAKPDFDYCCHIDRASISKSILESGLKPFNHHLGSNNDSTQNP 60

Query: 61  VTSNCNSGSSLDDLGWGYCTEEQLEEILMKNLQFVYTEAISKLVALGYDEDAAMRAILQN 120
             S+ +  S+ D+ GWGYCTEEQLEEIL+KNL+F+Y EAISKLVALGYDEDAA++AIL+N
Sbjct: 61  -KSSPSPNSNFDESGWGYCTEEQLEEILLKNLEFLYNEAISKLVALGYDEDAALKAILRN 120

Query: 121 GHCYGTMDVLTNVLHNSLSFLNGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 180
           GHCYG MDVLTN+LHNSL++LN                                      
Sbjct: 121 GHCYGGMDVLTNILHNSLAYLNSNCGSSNGKS---------------------------- 180

Query: 181 XXXXXXXXXXXXXXXXVDDPEPAFSDIRQLQEYSLAGMVCLLQQVRPHLTKGDAMWCLLM 240
                            D+ EP F+D+RQL+EYSLAGMVC+LQQVRPHL+KGDAMWCLLM
Sbjct: 181 -----------------DEAEPVFADLRQLEEYSLAGMVCMLQQVRPHLSKGDAMWCLLM 233

Query: 241 SDLHVGRASTMEIPVLPSA----PSNVNGSA-SGANGEN 275
           SDLHVGRASTMEIPVLP       S+++ S  SG+NG +
Sbjct: 241 SDLHVGRASTMEIPVLPGGGIENSSSISTSVESGSNGNH 233

BLAST of Carg26187 vs. TrEMBL
Match: tr|V4VCA6|V4VCA6_9ROSI (Uncharacterized protein OS=Citrus clementina OX=85681 GN=CICLE_v10030828mg PE=4 SV=1)

HSP 1 Score: 291.6 bits (745), Expect = 1.9e-75
Identity = 152/275 (55.27%), Postives = 183/275 (66.55%), Query Frame = 0

Query: 1   MGCTVRDKHVRTNRRSRSVKPEFDPCCHQERASLPKSVLESGSKPLDYHIGLDDSNQDNA 60
           MGCTVR+KH+RT RR+RSVKPEFDPCC+ ++AS+ KS+LESG KPL YH+GL+D +    
Sbjct: 1   MGCTVREKHIRTTRRTRSVKPEFDPCCYLDKASISKSILESGLKPLSYHLGLNDPSH--- 60

Query: 61  VTSNCNSGSSLDDLGWGYCTEEQLEEILMKNLQFVYTEAISKLVALGYDEDAAMRAILQN 120
                NS  + DD GWGYCTEEQLEEIL+KNL+F+Y EAISKLVALGYDED A++AIL+N
Sbjct: 61  -----NSNPNADDHGWGYCTEEQLEEILLKNLEFLYNEAISKLVALGYDEDVALKAILKN 120

Query: 121 GHCYGTMDVLTNVLHNSLSFLNGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 180
           GHCYG MDVLTN+LHNSL++LN                                      
Sbjct: 121 GHCYGGMDVLTNILHNSLAYLNSSSTSGGNGNTSSVNS---------------------- 180

Query: 181 XXXXXXXXXXXXXXXXVDDPEPAFSDIRQLQEYSLAGMVCLLQQVRPHLTKGDAMWCLLM 240
                            +D EP F+D+RQL+EYSLAGMVCLLQQVRPHL+KGDAMWCLLM
Sbjct: 181 -----------------EDSEPVFNDLRQLEEYSLAGMVCLLQQVRPHLSKGDAMWCLLM 223

Query: 241 SDLHVGRASTMEIPVLPSAPSNVNGSASGANGENV 276
           SDLHVGRAS++EIP      +NV G     N ++V
Sbjct: 241 SDLHVGRASSIEIP-----GTNVCGGTISNNVDSV 223

BLAST of Carg26187 vs. TrEMBL
Match: tr|A0A2H5QJ77|A0A2H5QJ77_CITUN (Uncharacterized protein OS=Citrus unshiu OX=55188 GN=CUMW_235020 PE=4 SV=1)

HSP 1 Score: 291.6 bits (745), Expect = 1.9e-75
Identity = 152/275 (55.27%), Postives = 183/275 (66.55%), Query Frame = 0

Query: 1   MGCTVRDKHVRTNRRSRSVKPEFDPCCHQERASLPKSVLESGSKPLDYHIGLDDSNQDNA 60
           MGCTVR+KH+RT RR+RSVKPEFDPCC+ ++AS+ KS+LESG KPL YH+GL+D +    
Sbjct: 1   MGCTVREKHIRTTRRTRSVKPEFDPCCYLDKASISKSILESGLKPLSYHLGLNDPSH--- 60

Query: 61  VTSNCNSGSSLDDLGWGYCTEEQLEEILMKNLQFVYTEAISKLVALGYDEDAAMRAILQN 120
                NS  + DD GWGYCTEEQLEEIL+KNL+F+Y EAISKLVALGYDED A++AIL+N
Sbjct: 61  -----NSNPNADDHGWGYCTEEQLEEILLKNLEFLYNEAISKLVALGYDEDVALKAILKN 120

Query: 121 GHCYGTMDVLTNVLHNSLSFLNGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 180
           GHCYG MDVLTN+LHNSL++LN                                      
Sbjct: 121 GHCYGGMDVLTNILHNSLAYLNSSSTSGGNGNTSSVNS---------------------- 180

Query: 181 XXXXXXXXXXXXXXXXVDDPEPAFSDIRQLQEYSLAGMVCLLQQVRPHLTKGDAMWCLLM 240
                            +D EP F+D+RQL+EYSLAGMVCLLQQVRPHL+KGDAMWCLLM
Sbjct: 181 -----------------EDSEPVFNDLRQLEEYSLAGMVCLLQQVRPHLSKGDAMWCLLM 223

Query: 241 SDLHVGRASTMEIPVLPSAPSNVNGSASGANGENV 276
           SDLHVGRAS++EIP      +NV G     N ++V
Sbjct: 241 SDLHVGRASSIEIP-----GTNVCGGTISNNVDSV 223

BLAST of Carg26187 vs. TrEMBL
Match: tr|A0A2H5QJ47|A0A2H5QJ47_CITUN (Uncharacterized protein (Fragment) OS=Citrus unshiu OX=55188 GN=CUMW_235020 PE=4 SV=1)

HSP 1 Score: 291.6 bits (745), Expect = 1.9e-75
Identity = 152/275 (55.27%), Postives = 183/275 (66.55%), Query Frame = 0

Query: 1   MGCTVRDKHVRTNRRSRSVKPEFDPCCHQERASLPKSVLESGSKPLDYHIGLDDSNQDNA 60
           MGCTVR+KH+RT RR+RSVKPEFDPCC+ ++AS+ KS+LESG KPL YH+GL+D +    
Sbjct: 9   MGCTVREKHIRTTRRTRSVKPEFDPCCYLDKASISKSILESGLKPLSYHLGLNDPSH--- 68

Query: 61  VTSNCNSGSSLDDLGWGYCTEEQLEEILMKNLQFVYTEAISKLVALGYDEDAAMRAILQN 120
                NS  + DD GWGYCTEEQLEEIL+KNL+F+Y EAISKLVALGYDED A++AIL+N
Sbjct: 69  -----NSNPNADDHGWGYCTEEQLEEILLKNLEFLYNEAISKLVALGYDEDVALKAILKN 128

Query: 121 GHCYGTMDVLTNVLHNSLSFLNGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 180
           GHCYG MDVLTN+LHNSL++LN                                      
Sbjct: 129 GHCYGGMDVLTNILHNSLAYLNSSSTSGGNGNTSSVNS---------------------- 188

Query: 181 XXXXXXXXXXXXXXXXVDDPEPAFSDIRQLQEYSLAGMVCLLQQVRPHLTKGDAMWCLLM 240
                            +D EP F+D+RQL+EYSLAGMVCLLQQVRPHL+KGDAMWCLLM
Sbjct: 189 -----------------EDSEPVFNDLRQLEEYSLAGMVCLLQQVRPHLSKGDAMWCLLM 231

Query: 241 SDLHVGRASTMEIPVLPSAPSNVNGSASGANGENV 276
           SDLHVGRAS++EIP      +NV G     N ++V
Sbjct: 249 SDLHVGRASSIEIP-----GTNVCGGTISNNVDSV 231

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
XP_022923356.13.7e-11597.49MND1-interacting protein 1 [Cucurbita moschata][more]
XP_023552320.11.4e-11496.36MND1-interacting protein 1-like [Cucurbita pepo subsp. pepo][more]
XP_023007713.12.4e-11497.45MND1-interacting protein 1-like [Cucurbita maxima][more]
XP_011650349.11.0e-10486.27PREDICTED: MND1-interacting protein 1 [Cucumis sativus][more]
XP_008448707.12.2e-10486.12PREDICTED: MND1-interacting protein 1 [Cucumis melo][more]
Match NameE-valueIdentityDescription
AT2G35330.12.6e-6751.27RING/U-box superfamily protein[more]
AT1G32530.12.9e-5045.49RING/U-box superfamily protein[more]
AT4G03000.11.1e-0924.14RING/U-box superfamily protein[more]
AT1G03365.17.3e-0924.60RING/U-box superfamily protein[more]
Match NameE-valueIdentityDescription
sp|Q8RX22|MIP1_ARATH5.3e-4945.49MND1-interacting protein 1 OS=Arabidopsis thaliana OX=3702 GN=MIP1 PE=1 SV=1[more]
sp|Q0WPJ7|RF298_ARATH2.0e-0824.14Putative E3 ubiquitin-protein ligase RF298 OS=Arabidopsis thaliana OX=3702 GN=RF... [more]
sp|Q9ZVT8|RF4_ARATH1.3e-0724.60Putative E3 ubiquitin-protein ligase RF4 OS=Arabidopsis thaliana OX=3702 GN=RF4 ... [more]
Match NameE-valueIdentityDescription
tr|A0A1S3BJQ6|A0A1S3BJQ6_CUCME1.5e-10486.12MND1-interacting protein 1 OS=Cucumis melo OX=3656 GN=LOC103490797 PE=4 SV=1[more]
tr|M5WCP8|M5WCP8_PRUPE1.7e-7655.20Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_5G040000 PE=4 SV=1[more]
tr|V4VCA6|V4VCA6_9ROSI1.9e-7555.27Uncharacterized protein OS=Citrus clementina OX=85681 GN=CICLE_v10030828mg PE=4 ... [more]
tr|A0A2H5QJ77|A0A2H5QJ77_CITUN1.9e-7555.27Uncharacterized protein OS=Citrus unshiu OX=55188 GN=CUMW_235020 PE=4 SV=1[more]
tr|A0A2H5QJ47|A0A2H5QJ47_CITUN1.9e-7555.27Uncharacterized protein (Fragment) OS=Citrus unshiu OX=55188 GN=CUMW_235020 PE=4... [more]
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Carg26187-RACarg26187-RAmRNA


Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..22
NoneNo IPR availablePANTHERPTHR10044INHIBITOR OF APOPTOSIScoord: 1..269
NoneNo IPR availablePANTHERPTHR10044:SF133MND1-INTERACTING PROTEIN 1coord: 1..269

The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Carg26187Cucsa.321720Cucumber (Gy14) v1carcgyB0573
The following gene(s) are paralogous to this gene:

None