Carg26185 (gene) Silver-seed gourd | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Carg26185
Type	gene
Organism	Cucurbita argyrosperma (Silver-seed gourd)
Description	MND1-interacting protein 1
Location	Cucurbita_argyrosperma_scaffold_219 : 50141 .. 52568 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexonthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAGAATGCGTTGAGAAAGGCCAGTGGTCAGGTGGACCGTGCAAATTCGACAGTACGACGACTGAGACAGAAAATGCAGAAATTAGAGCAGAGATGGAAGCTTTAAAGTTAAGTGCCTCCGAGTCTGTCACAACTTGTTTGGAGGTTGCAAAGAGGAGAAAAAAAAGCTTAAAGAGACTATTGGCCTGGGAAAAGCAAAAAACACAAATTACAGAGCAGATTGCAGAGGAGAAGGAGAAGATTTCAAGGTTGCAAGATGAAATGGAGATGATCAAGGTAGCTCAAAAAAAGAGCTGAGGTAAGAAATCATCTTTCTTTCCTGTTCCTCTTACACTGTCCTAATTTCTAGGCCATCCCTGTCGTTTTGATATTCAATTTAAAACAGCAAATTCAGTGTTAGAAATAGTTATATCTTTACACAAATAATAACAATGAATCAACACAAGTCATAATACTAGCAAGGGGTCGTAAATCAGCTGTCAGCTCCATTTAGGATATGATTAGTGGCCAGTTTACCTCTTTCAGCCTAATGATTTACTATTTTTCTGACCACCCAACTGGATTGGGAACTGTGGGCTTGATATTGTCAGAAAATAGTCTCATAATCCAAGGTTTGCATTGTCATGTAACCCAAGAGGTCTTAGTTGTTTTGCTGATTGTGTCATCTGAGGTTGACAACAGAGCATTGAAGGCTATGATTCAAAATCATTACAGTTACGAGGCTGTTCTTTATTCCTGCTTGTTTTTCATATCACATGAAATAATGTTTCATTACAAGTTGGAACTGTGAGATGTTGGGGAGGAGAACGAAGCATTCTTTATAAGAGTGTGGAAACCTCTACCTAGCAGACGCGTTTTAAAAACCTTGAGGAAAGTCCGAAGGGGAAAGCCCAAAGAGGACAATATCTGCTAGGTGTCGGCTTGGGCTGTTACAAATGGTATTAGAGCTATTGGATACTGGGCAATGTGCCAGAAAGAGGCTAAGACCCGAAGGGGTGGACACGGGGCAGGTTGTGTCAAACCAGGACACTGGGCCCTAAAAGAGGGTAGGATGAGGGGTCCAAACATCGATTGGAGAAGAGAATGAGTGCTAGGGAGGACGCTGGGTCCTAAAGGGGGTGGATTGTGAGATCCTACGTCGGTTGGGGAGAAAAACGAAGCATTATTTATAAGGGTGTAGAAATCCCTCCCTAGTAGACGTGTTTTAGAAACCTTGAGGGGAAGCCTGAAAGGGAAAGCCCAAAAAGGATAATATTTGCTAGCGGTGGACTTGAGCTGTTACCGGAACTGCCATGTGAAACTTTTTATTATAATTTTTATCGCTCAGCCAATTTCCGACTCACGAAACCATAGTGATTCTGCTTCTGTGATGTTCATACCCTTGCTTTTGTTATTTGTCAAAGAATCTGCATATAGTATATGGTAATTTTGATTCTGATCACTCTTTTCTTTTTTCTTTTAAATGTTCAATCAAACGTTTGCCTGAGATGGAGTTATGAAAGTTATTCTTAAGATAGTTGAATTGTAGCTGTCAATTTGTCCTGCATTCCTTGTTCAATCAAACACCTTGCCCTTCCTTAATCATTTGGCAATTAACAAATACCACGTTATTTATCGATGATTATCGTCTCGAGTCTGAAAACGCTTCATATAGTCTTCATTATCATCTACTGTGCAAATGATGACGTATTTATAGGCTAGGTGGAGGCAGGAGTTGAATGCTAAGGAAGCTGCCATGACACAAGTGGAAGACGAAAGACTTCGTAAAGAAGCAGCGGAGGCGAGTAGTAAAAGAAAGCTCGAGGCATTACGACTTAAGATAGAGATAGATTTCCAGCGCCACAAGGATGATCTCCAAAGGCTCGAACAAGAACTTTTGCGTCTAAAGGCATCTGCACAATCTATTGACTCACACCAACCCTCCAATAACACACCTAGAGGGAATTCCGAGGGCGTAAAACCCCAGGGAGAAACGATTGCGAAAATGCTTCGGGAATTAGATAGCTATGAGGAATCAACAGAGGAAGACGTCAACCACGACCGCGAATGCATGATATGTATGAGAGGTGAGGTCTCCATTGTTTTCTTACCTTGCGCTCACCAAGTTGTGTGTGCGAGTTGCAGTGATAGTTACGGGAAAAAGGGTAAAGCAGCATGCCCGTGTTGTCGGGTTCCGATAGAACAGAGAATCCGAGTTTTTGGTGCGAGTTCATAGAAGAATAGTAAGAGTTGTGTCAAGTGTAGCATTTCTTTGTTAAAAACACAGCATTTCAGTGCGGTGCAGGTATTGGGTAGTATGTATACCTTTGAATATGTTTACAGTTTACTGAATATACTTGGTTGAACATGCTTCTGGTCTGGTATATCAAAATGGCTATCAGTGTGTATAAATAAAATGAACATATGGGGTGTGATGCCCTTTGTCT

mRNA sequence

ATGGAGAATGCGTTGAGAAAGGCCAGTGGTGGACCGTGCAAATTCGACAGTACGACGACTGAGACAGAAAATGCAGAAATTAGAGCAGAGATGGAAGCTTTAAAGTTAAGTGCCTCCGAGTCTGTCACAACTTGTTTGGAGGTTGCAAAGAGGAGAAAAAAAAGCTTAAAGAGACTATTGGCCTGGGAAAAGCAAAAAACACAAATTACAGAGCAGATTGCAGAGGAGAAGGAGAAGATTTCAAGGTTGCAAGATGAAATGGAGATGATCAAGGCTAGGTGGAGGCAGGAGTTGAATGCTAAGGAAGCTGCCATGACACAAGTGGAAGACGAAAGACTTCGTAAAGAAGCAGCGGAGGCGAGTAGTAAAAGAAAGCTCGAGGCATTACGACTTAAGATAGAGATAGATTTCCAGCGCCACAAGGATGATCTCCAAAGGCTCGAACAAGAACTTTTGCGTCTAAAGGCATCTGCACAATCTATTGACTCACACCAACCCTCCAATAACACACCTAGAGGGAATTCCGAGGGCGTAAAACCCCAGGGAGAAACGATTGCGAAAATGCTTCGGGAATTAGATAGCTATGAGGAATCAACAGAGGAAGACGTCAACCACGACCGCGAATGCATGATATGTATGAGAGGTGAGGTCTCCATTGTTTTCTTACCTTGCGCTCACCAAGTTGTGTGTGCGAGTTGCAGTGATAGTTACGGGAAAAAGGGTAAAGCAGCATGCCCGTGTTGTCGGGTTCCGATAGAACAGAGAATCCGAGTTTTTGGTGCGAGTTCATAGAAGAATAGTAAGAGTTGTGTCAAGTGTAGCATTTCTTTGTTAAAAACACAGCATTTCAGTGCGGTGCAGGTATTGGGTAGTATGTATACCTTTGAATATGTTTACAGTTTACTGAATATACTTGGTTGAACATGCTTCTGGTCTGGTATATCAAAATGGCTATCAGTGTGTATAAATAAAATGAACATATGGGGTGTGATGCCCTTTGTCT

Coding sequence (CDS)

ATGGAGAATGCGTTGAGAAAGGCCAGTGGTGGACCGTGCAAATTCGACAGTACGACGACTGAGACAGAAAATGCAGAAATTAGAGCAGAGATGGAAGCTTTAAAGTTAAGTGCCTCCGAGTCTGTCACAACTTGTTTGGAGGTTGCAAAGAGGAGAAAAAAAAGCTTAAAGAGACTATTGGCCTGGGAAAAGCAAAAAACACAAATTACAGAGCAGATTGCAGAGGAGAAGGAGAAGATTTCAAGGTTGCAAGATGAAATGGAGATGATCAAGGCTAGGTGGAGGCAGGAGTTGAATGCTAAGGAAGCTGCCATGACACAAGTGGAAGACGAAAGACTTCGTAAAGAAGCAGCGGAGGCGAGTAGTAAAAGAAAGCTCGAGGCATTACGACTTAAGATAGAGATAGATTTCCAGCGCCACAAGGATGATCTCCAAAGGCTCGAACAAGAACTTTTGCGTCTAAAGGCATCTGCACAATCTATTGACTCACACCAACCCTCCAATAACACACCTAGAGGGAATTCCGAGGGCGTAAAACCCCAGGGAGAAACGATTGCGAAAATGCTTCGGGAATTAGATAGCTATGAGGAATCAACAGAGGAAGACGTCAACCACGACCGCGAATGCATGATATGTATGAGAGGTGAGGTCTCCATTGTTTTCTTACCTTGCGCTCACCAAGTTGTGTGTGCGAGTTGCAGTGATAGTTACGGGAAAAAGGGTAAAGCAGCATGCCCGTGTTGTCGGGTTCCGATAGAACAGAGAATCCGAGTTTTTGGTGCGAGTTCATAG

Protein sequence

MENALRKASGGPCKFDSTTTETENAEIRAEMEALKLSASESVTTCLEVAKRRKKSLKRLLAWEKQKTQITEQIAEEKEKISRLQDEMEMIKARWRQELNAKEAAMTQVEDERLRKEAAEASSKRKLEALRLKIEIDFQRHKDDLQRLEQELLRLKASAQSIDSHQPSNNTPRGNSEGVKPQGETIAKMLRELDSYEESTEEDVNHDRECMICMRGEVSIVFLPCAHQVVCASCSDSYGKKGKAACPCCRVPIEQRIRVFGASS

Homology

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BLAST of Carg26185 vs. NCBI nr
Match: XP_022923356.1 (MND1-interacting protein 1 [Cucurbita moschata])

HSP 1 Score: 458.0 bits (1177), Expect = 2.2e-125
Identity = 251/272 (92.28%), Postives = 255/272 (93.75%), Query Frame = 0


Query: 1   MENALRKASGGPCKFDSTT--TETENAEIRAEMEALKLSASESVTTCLEVAKRRKKSLKR 60
           MENALRKASG   + +ST    ETENAEIRAEMEALKLSASESVTTCLEVAKR KKSLKR
Sbjct: 500 MENALRKASGQVDRANSTVRRLETENAEIRAEMEALKLSASESVTTCLEVAKREKKSLKR 559

Query: 61  LLAWEKQKTQITEQIAEEKEKISRLQDEMEMIK-------ARWRQELNAKEAAMTQVEDE 120
           LLAWEKQKT++ EQIAEEKEKISRLQDEMEMIK       ARWRQELNAKEAAMTQVEDE
Sbjct: 560 LLAWEKQKTKLQEQIAEEKEKISRLQDEMEMIKVAQKEAEARWRQELNAKEAAMTQVEDE 619

Query: 121 RLRKEAAEASSKRKLEALRLKIEIDFQRHKDDLQRLEQELLRLKASAQSIDSHQPSNNTP 180
           RLRKEAAEASSKRKLEALRLKIEIDFQRHKDDLQRLEQELLRLKASAQSIDSHQPSNNTP
Sbjct: 620 RLRKEAAEASSKRKLEALRLKIEIDFQRHKDDLQRLEQELLRLKASAQSIDSHQPSNNTP 679

Query: 181 RGNSEGVKPQGETIAKMLRELDSYEESTEEDVNHDRECMICMRGEVSIVFLPCAHQVVCA 240
           RGNSEGVKPQGETIAKMLRELDSYEESTEEDVNHDRECMICMRGEVSIVFLPCAHQVVCA
Sbjct: 680 RGNSEGVKPQGETIAKMLRELDSYEESTEEDVNHDRECMICMRGEVSIVFLPCAHQVVCA 739

Query: 241 SCSDSYGKKGKAACPCCRVPIEQRIRVFGASS 264
           SCSDSYGKKGKAACPCCRVPIEQRIRVFGASS
Sbjct: 740 SCSDSYGKKGKAACPCCRVPIEQRIRVFGASS 771

[Close]

BLAST of Carg26185 vs. NCBI nr
Match: XP_023552320.1 (MND1-interacting protein 1-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 450.7 bits (1158), Expect = 3.5e-123
Identity = 246/272 (90.44%), Postives = 253/272 (93.01%), Query Frame = 0


Query: 1   MENALRKASGGPCKFDSTT--TETENAEIRAEMEALKLSASESVTTCLEVAKRRKKSLKR 60
           MENALRKASG   + +ST    ETENAEIRAEMEALKLSASESVTTCLEVAKR KKSLKR
Sbjct: 493 MENALRKASGQVDRANSTVRRLETENAEIRAEMEALKLSASESVTTCLEVAKREKKSLKR 552

Query: 61  LLAWEKQKTQITEQIAEEKEKISRLQDEMEMIK-------ARWRQELNAKEAAMTQVEDE 120
           LLAWEKQKT++ EQI EEK+KISRLQDEMEMIK       ARWRQELNAKEAAMTQVEDE
Sbjct: 553 LLAWEKQKTKLQEQIVEEKDKISRLQDEMEMIKVAQKEAEARWRQELNAKEAAMTQVEDE 612

Query: 121 RLRKEAAEASSKRKLEALRLKIEIDFQRHKDDLQRLEQELLRLKASAQSIDSHQPSNNTP 180
           RLRKEAAEASSKRKLEALRLKIEIDFQRHKDDLQRLEQELLRLKASAQSIDSHQPSNNTP
Sbjct: 613 RLRKEAAEASSKRKLEALRLKIEIDFQRHKDDLQRLEQELLRLKASAQSIDSHQPSNNTP 672

Query: 181 RGNSEGVKPQGETIAKMLRELDSYEESTEEDVNHDRECMICMRGEVSIVFLPCAHQVVCA 240
           RGNSEGVKPQGETIAKMLRELDSYEESTEEDVNHDRECMICMRGEVSIVFLPCAHQV+CA
Sbjct: 673 RGNSEGVKPQGETIAKMLRELDSYEESTEEDVNHDRECMICMRGEVSIVFLPCAHQVLCA 732

Query: 241 SCSDSYGKKGKAACPCCRVPIEQRIRVFGASS 264
           SCSDSYGK+ KAACPCCRVPIEQRIRVFGASS
Sbjct: 733 SCSDSYGKRSKAACPCCRVPIEQRIRVFGASS 764

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BLAST of Carg26185 vs. NCBI nr
Match: XP_023007713.1 (MND1-interacting protein 1-like [Cucurbita maxima])

HSP 1 Score: 449.1 bits (1154), Expect = 1.0e-122
Identity = 246/272 (90.44%), Postives = 253/272 (93.01%), Query Frame = 0


Query: 1   MENALRKASGGPCKFDSTT--TETENAEIRAEMEALKLSASESVTTCLEVAKRRKKSLKR 60
           MENALRKASG   + +ST    ETENAEIRAEMEALKLSASESVTTCLEVAKR KKSLKR
Sbjct: 495 MENALRKASGQVDRANSTVRRLETENAEIRAEMEALKLSASESVTTCLEVAKREKKSLKR 554

Query: 61  LLAWEKQKTQITEQIAEEKEKISRLQDEMEMIK-------ARWRQELNAKEAAMTQVEDE 120
           LLAWEKQKT++ EQIAEEK+KISRLQDEMEMIK       ARWRQELNAKEAAM QVEDE
Sbjct: 555 LLAWEKQKTKLQEQIAEEKDKISRLQDEMEMIKVAQKEAEARWRQELNAKEAAMAQVEDE 614

Query: 121 RLRKEAAEASSKRKLEALRLKIEIDFQRHKDDLQRLEQELLRLKASAQSIDSHQPSNNTP 180
           RLRKEAAEASSKRKLEALRLKIEIDFQRHKDDLQRLEQELLRLKASAQSIDSHQPS+NTP
Sbjct: 615 RLRKEAAEASSKRKLEALRLKIEIDFQRHKDDLQRLEQELLRLKASAQSIDSHQPSSNTP 674

Query: 181 RGNSEGVKPQGETIAKMLRELDSYEESTEEDVNHDRECMICMRGEVSIVFLPCAHQVVCA 240
           RGNSEGVKPQGETIAKMLRELDSYEESTEE VNHDRECMICMRGEVSIVFLPCAHQV+CA
Sbjct: 675 RGNSEGVKPQGETIAKMLRELDSYEESTEEGVNHDRECMICMRGEVSIVFLPCAHQVLCA 734

Query: 241 SCSDSYGKKGKAACPCCRVPIEQRIRVFGASS 264
           SCSDSYGKKGKAACPCCRVPIEQRIRVFGASS
Sbjct: 735 SCSDSYGKKGKAACPCCRVPIEQRIRVFGASS 766

[Close]

BLAST of Carg26185 vs. NCBI nr
Match: KGN55779.1 (hypothetical protein Csa_3G011800 [Cucumis sativus])

HSP 1 Score: 377.9 bits (969), Expect = 2.9e-101
Identity = 210/273 (76.92%), Postives = 230/273 (84.25%), Query Frame = 0


Query: 1   MENALRKASGGPCKFDSTT--TETENAEIRAEMEALKLSASESVTTCLEVAKRRKKSLKR 60
           MENALRKASG   + ++     E ENAEIRAEMEALKLSASESVTTCLEVAKR KKSLKR
Sbjct: 274 MENALRKASGQVDRANAAVRRLEIENAEIRAEMEALKLSASESVTTCLEVAKREKKSLKR 333

Query: 61  LLAWEKQKTQITEQIAEEKEKISRLQDEMEMIK-------ARWRQELNAKEAAMTQVEDE 120
           LLAWEKQKT++ EQIAEEK+KIS+LQD++EMIK        RWRQE+NAKEAAM QVEDE
Sbjct: 334 LLAWEKQKTKLQEQIAEEKDKISKLQDQLEMIKLDQKEAEVRWRQEVNAKEAAMAQVEDE 393

Query: 121 RLRKEAAEASSKRKLEALRLKIEIDFQRHKDDLQRLEQELLRLKASAQSIDSHQPS-NNT 180
           R  KEAAEASSKRKLEALRLKIEIDFQRHKD              SAQS +SH PS NNT
Sbjct: 394 RHSKEAAEASSKRKLEALRLKIEIDFQRHKDXXXXXXXXXXXXXXSAQSTESHHPSNNNT 453

Query: 181 PRGNSEGVKPQGETIAKMLRELDSYEESTEEDVNHDRECMICMRGEVSIVFLPCAHQVVC 240
           P+GNS+ VKPQGETIAKMLRELDSYE+S+E+DVN DREC+ICMRGEVSIVFLPCAHQV+C
Sbjct: 454 PKGNSDSVKPQGETIAKMLRELDSYEDSSEKDVNQDRECIICMRGEVSIVFLPCAHQVLC 513

Query: 241 ASCSDSYGKKGKAACPCCRVPIEQRIRVFGASS 264
           ASCSD+YGKKG+AACPCCRV IEQRIRVFGASS
Sbjct: 514 ASCSDNYGKKGRAACPCCRVTIEQRIRVFGASS 546

[Close]

BLAST of Carg26185 vs. NCBI nr
Match: XP_011650349.1 (PREDICTED: MND1-interacting protein 1 [Cucumis sativus])

HSP 1 Score: 377.9 bits (969), Expect = 2.9e-101
Identity = 210/273 (76.92%), Postives = 230/273 (84.25%), Query Frame = 0


Query: 1   MENALRKASGGPCKFDSTT--TETENAEIRAEMEALKLSASESVTTCLEVAKRRKKSLKR 60
           MENALRKASG   + ++     E ENAEIRAEMEALKLSASESVTTCLEVAKR KKSLKR
Sbjct: 500 MENALRKASGQVDRANAAVRRLEIENAEIRAEMEALKLSASESVTTCLEVAKREKKSLKR 559

Query: 61  LLAWEKQKTQITEQIAEEKEKISRLQDEMEMIK-------ARWRQELNAKEAAMTQVEDE 120
           LLAWEKQKT++ EQIAEEK+KIS+LQD++EMIK        RWRQE+NAKEAAM QVEDE
Sbjct: 560 LLAWEKQKTKLQEQIAEEKDKISKLQDQLEMIKLDQKEAEVRWRQEVNAKEAAMAQVEDE 619

Query: 121 RLRKEAAEASSKRKLEALRLKIEIDFQRHKDDLQRLEQELLRLKASAQSIDSHQPS-NNT 180
           R  KEAAEASSKRKLEALRLKIEIDFQRHKD              SAQS +SH PS NNT
Sbjct: 620 RHSKEAAEASSKRKLEALRLKIEIDFQRHKDXXXXXXXXXXXXXXSAQSTESHHPSNNNT 679

Query: 181 PRGNSEGVKPQGETIAKMLRELDSYEESTEEDVNHDRECMICMRGEVSIVFLPCAHQVVC 240
           P+GNS+ VKPQGETIAKMLRELDSYE+S+E+DVN DREC+ICMRGEVSIVFLPCAHQV+C
Sbjct: 680 PKGNSDSVKPQGETIAKMLRELDSYEDSSEKDVNQDRECIICMRGEVSIVFLPCAHQVLC 739

Query: 241 ASCSDSYGKKGKAACPCCRVPIEQRIRVFGASS 264
           ASCSD+YGKKG+AACPCCRV IEQRIRVFGASS
Sbjct: 740 ASCSDNYGKKGRAACPCCRVTIEQRIRVFGASS 772

[Close]

BLAST of Carg26185 vs. TAIR10
Match: AT1G32530.1 (RING/U-box superfamily protein)

HSP 1 Score: 203.8 bits (517), Expect = 1.3e-52
Identity = 127/254 (50.00%), Postives = 156/254 (61.42%), Query Frame = 0


Query: 21  ETENAEIRAEMEALKLSASESVTTCLEVAKRRKKSLKRLLAWEKQKTQITEQIAEEKEKI 80
           E +NAEIRAE E  KLSASES+  C+E +K+ KK LK+L+AWEKQ  ++ ++I  EKEKI
Sbjct: 463 ENQNAEIRAEREGSKLSASESLKACMEASKKEKKCLKKLVAWEKQILKLQDEITAEKEKI 522

Query: 81  SRLQDEMEMI-------KARWRQELNAKEAAMTQVEDERLRKEAAEASSKRKLEALRLKI 140
             L   +  I                                      +KRKLE LRLKI
Sbjct: 523 KALYKTLAQITEYXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGHNKRKLETLRLKI 582

Query: 141 EIDFQRHKDDLQRLEQELLRLKASAQSIDSHQPSNNTPRGNSEGVKPQGETIAKMLRELD 200
           E+DFQRHKDD QRLEQEL RLKAS+ S DS   SNN  +      K QGE IAK+L E+D
Sbjct: 583 ELDFQRHKDDHQRLEQELGRLKASSDS-DSSHISNNAWKPK----KSQGENIAKLLEEID 642

Query: 201 SYEESTEEDVNHDRECMICMRGEVSIVFLPCAHQVVCASCSDSY----GKKGKAACPCCR 260
             E S + + N+DREC+ICM+ EVS+VFLPCAHQVVC SCSDS+        K  CPCCR
Sbjct: 643 KLEGSYDNEANYDRECIICMKDEVSVVFLPCAHQVVCGSCSDSFFASNNGGSKVTCPCCR 702

Query: 261 VPIEQRIRVFGASS 264
             ++QRIR+FGA+S
Sbjct: 703 GLVQQRIRIFGATS 711

[Close]

BLAST of Carg26185 vs. TAIR10
Match: AT2G35330.1 (RING/U-box superfamily protein)

HSP 1 Score: 189.9 bits (481), Expect = 2.0e-48
Identity = 121/272 (44.49%), Postives = 154/272 (56.62%), Query Frame = 0


Query: 1   MENALRKASGGPCKFDST--TTETENAEIRAEMEALKLSASESVTTCLEVAKRRKKSLKR 60
           MENALRKASG   K ++     E E+AEIRAEMEA KLSASES+T C+E +K+ KK LK+
Sbjct: 468 MENALRKASGQVDKANAVVRALENESAEIRAEMEASKLSASESLTACMEASKKEKKCLKK 527

Query: 61  LLAWEKQKTQITEQIAEE-------KEKISRLQDEMEMIKARWRQELNAKEAAMTQVEDE 120
           LLAWEKQK                    ++++  E +  +A+WR                
Sbjct: 528 LLAWEKQKMXXXXXXXXXXXXXXALNRALAQITQEEKEYEAKWRXXXXXXXXXXXXXXXX 587

Query: 121 RLRKEAAEASSKRKLEALRLKIEIDFQRHKDDLQRLEQELLRLKASAQSIDSHQPSNNTP 180
                       RK+E+LRL  EIDFQRHK                            T 
Sbjct: 588 XXXXXXXXXXXXRKVESLRLXXEIDFQRHK-XXXXXXXXXXXXXXXXXXXXXXXXXXXTS 647

Query: 181 RGNSEGVKPQGETIAKMLRELDSYEESTEEDVNHDRECMICMRGEVSIVFLPCAHQVVCA 240
               +  K +GET++K+L EL+  + S E++ N+DREC+ICM+ EVS+VFLPCAHQVVCA
Sbjct: 648 HTKVKSDKSKGETMSKLLEELNRLDGSYEKEANYDRECLICMKDEVSVVFLPCAHQVVCA 707

Query: 241 SCSDSYGKKGKAACPCCRVPIEQRIRVFGASS 264
           SCSDS+   GKA CPCCR P++QRIRVFGASS
Sbjct: 708 SCSDSFMGSGKATCPCCRAPVQQRIRVFGASS 738

[Close]

BLAST of Carg26185 vs. TAIR10
Match: AT1G03365.1 (RING/U-box superfamily protein)

HSP 1 Score: 107.1 bits (266), Expect = 1.7e-23
Identity = 85/272 (31.25%), Postives = 140/272 (51.47%), Query Frame = 0


Query: 1   MENALRKASGGPCKFDSTT--TETENAEIRAEMEALKLSASESVTTCLEVAKRRKKSLKR 60
           M+ AL+ A+    K  +T    E E + ++ EMEA K+ A ES  +  E  +R ++SLK 
Sbjct: 568 MDFALKNATSQLEKAFNTAHRLELEQSILKKEMEAAKIKAVESAESFREAKERGERSLKD 627

Query: 61  LLAWEKQKTQITEQIAEEKEKISRLQDEM-------EMIKARWRQELNAKEAAMTQVEDE 120
           + +WE QK  + E++  ++EK++ LQ E+         I+A  +QE  AK     Q    
Sbjct: 628 IHSWEGQKIMLQEELKGQREKVTVLQKEVTKAKNRQNQIEAALKQERTAKGKLSAQASLI 687

Query: 121 RLRKEAAEASSKRKLEALRLKIEIDFQRHKDDLQRLEQELLRLKASAQSIDSHQPSNNTP 180
           R   +  EA  K + E ++ K E D + + D+++RLE+E+  LK  +     +       
Sbjct: 688 RKETKELEALGKVEEERIKGKAETDVKYYIDNIKRLEREISELKLKS----DYSRIIALK 747

Query: 181 RGNSEGVKPQGETIAKMLRELDSYEESTEEDVNHDRECMICMRGEVSIVFLPCAHQVVCA 240
           +G+SE    + E++                 V  +REC++C+  E+S++FLPCAHQV+C 
Sbjct: 748 KGSSESKATKRESLGM-------------PKVKRERECVMCLSEEMSVIFLPCAHQVLCF 807

Query: 241 SCSDSYGKKGKAACPCCRVPIEQRIRVFGASS 264
            C+  + K+G   CP CR  I +RI+   A S
Sbjct: 808 KCNQLHEKEGMMDCPSCRGTIHRRIQARFARS 822

[Close]

BLAST of Carg26185 vs. TAIR10
Match: AT4G03000.1 (RING/U-box superfamily protein)

HSP 1 Score: 106.7 bits (265), Expect = 2.2e-23
Identity = 70/244 (28.69%), Postives = 124/244 (50.82%), Query Frame = 0


Query: 30  EMEALKLSASESVTTCLEVAKRRKKSLKRLLAWEKQKTQITEQIAEEKEKISRLQDEM-- 89
           E EA  + ASES  +C E  +R ++ LK   +WE QK  + E++  +++K++ LQ E+  
Sbjct: 569 EREAANIRASESAESCREAKERVQRLLKNSQSWEGQKNLLQEELKSQRDKVAGLQQEVAK 628

Query: 90  -----EMIKARWRQELNAKEAAMTQVEDERLRKEAAEASSKRKLEALRLKIEIDFQRHKD 149
                  I+A W+QE +A      Q    +  +   E   K + E ++ K E D + + +
Sbjct: 629 AKTRQNQIEATWKQEKSATGKLTAQAAALKKERGKLEELGKAEEERIKTKAENDVKYYIE 688

Query: 150 DLQRLEQELLRLKASAQS---------IDSHQPSNNTPRGNSEGVKPQGETIAKMLRELD 209
           +++RL+ E+ +LK  + S         ID +         ++   K      AK+     
Sbjct: 689 NIKRLDTEISKLKLKSDSLKIAALKKGIDGNNDXXXXXMNHTTNTKANSMASAKVWEN-- 748

Query: 210 SYEESTEEDVNHDRECMICMRGEVSIVFLPCAHQVVCASCSDSYGKKGKAACPCCRVPIE 258
              +  E  +  +REC++C+  E+S++FLPCAHQV+C+ C+  + K+    CP CR  I+
Sbjct: 749 --NQGAESKIKRERECVMCLSEEMSVIFLPCAHQVLCSKCNQLHEKEAMEDCPSCRAKIQ 808

[Close]

BLAST of Carg26185 vs. TAIR10
Match: AT1G73950.1 (Transmembrane Fragile-X-F-associated protein)

HSP 1 Score: 57.4 bits (137), Expect = 1.6e-08
Identity = 25/70 (35.71%), Postives = 42/70 (60.00%), Query Frame = 0


Query: 191 ELDSYEESTEEDVNHDRE-CMICMRGEVSIVFLPCAHQVVCASCSDSYGKKGKAACPCCR 250
           E+  + +   E + +++  C +C   E+S+V LPC H+V+C +CSD   K     CP CR
Sbjct: 400 EITKFSQQEYERLQNEKVLCRVCFEREISVVLLPCRHRVLCRNCSDKCKK-----CPFCR 459

Query: 251 VPIEQRIRVF 260
           + IE+R+ V+
Sbjct: 460 ITIEERLPVY 464

[Close]

BLAST of Carg26185 vs. Swiss-Prot
Match: sp|Q8RX22|MIP1_ARATH (MND1-interacting protein 1 OS=Arabidopsis thaliana OX=3702 GN=MIP1 PE=1 SV=1)

HSP 1 Score: 203.8 bits (517), Expect = 2.4e-51
Identity = 127/254 (50.00%), Postives = 156/254 (61.42%), Query Frame = 0


Query: 21  ETENAEIRAEMEALKLSASESVTTCLEVAKRRKKSLKRLLAWEKQKTQITEQIAEEKEKI 80
           E +NAEIRAE E  KLSASES+  C+E +K+ KK LK+L+AWEKQ  ++ ++I  EKEKI
Sbjct: 463 ENQNAEIRAEREGSKLSASESLKACMEASKKEKKCLKKLVAWEKQILKLQDEITAEKEKI 522

Query: 81  SRLQDEMEMI-------KARWRQELNAKEAAMTQVEDERLRKEAAEASSKRKLEALRLKI 140
             L   +  I                                      +KRKLE LRLKI
Sbjct: 523 KALYKTLAQITEYXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGHNKRKLETLRLKI 582

Query: 141 EIDFQRHKDDLQRLEQELLRLKASAQSIDSHQPSNNTPRGNSEGVKPQGETIAKMLRELD 200
           E+DFQRHKDD QRLEQEL RLKAS+ S DS   SNN  +      K QGE IAK+L E+D
Sbjct: 583 ELDFQRHKDDHQRLEQELGRLKASSDS-DSSHISNNAWKPK----KSQGENIAKLLEEID 642

Query: 201 SYEESTEEDVNHDRECMICMRGEVSIVFLPCAHQVVCASCSDSY----GKKGKAACPCCR 260
             E S + + N+DREC+ICM+ EVS+VFLPCAHQVVC SCSDS+        K  CPCCR
Sbjct: 643 KLEGSYDNEANYDRECIICMKDEVSVVFLPCAHQVVCGSCSDSFFASNNGGSKVTCPCCR 702

Query: 261 VPIEQRIRVFGASS 264
             ++QRIR+FGA+S
Sbjct: 703 GLVQQRIRIFGATS 711

[Close]

BLAST of Carg26185 vs. Swiss-Prot
Match: sp|Q9ZVT8|RF4_ARATH (Putative E3 ubiquitin-protein ligase RF4 OS=Arabidopsis thaliana OX=3702 GN=RF4 PE=3 SV=1)

HSP 1 Score: 107.1 bits (266), Expect = 3.1e-22
Identity = 85/272 (31.25%), Postives = 140/272 (51.47%), Query Frame = 0


Query: 1   MENALRKASGGPCKFDSTT--TETENAEIRAEMEALKLSASESVTTCLEVAKRRKKSLKR 60
           M+ AL+ A+    K  +T    E E + ++ EMEA K+ A ES  +  E  +R ++SLK 
Sbjct: 568 MDFALKNATSQLEKAFNTAHRLELEQSILKKEMEAAKIKAVESAESFREAKERGERSLKD 627

Query: 61  LLAWEKQKTQITEQIAEEKEKISRLQDEM-------EMIKARWRQELNAKEAAMTQVEDE 120
           + +WE QK  + E++  ++EK++ LQ E+         I+A  +QE  AK     Q    
Sbjct: 628 IHSWEGQKIMLQEELKGQREKVTVLQKEVTKAKNRQNQIEAALKQERTAKGKLSAQASLI 687

Query: 121 RLRKEAAEASSKRKLEALRLKIEIDFQRHKDDLQRLEQELLRLKASAQSIDSHQPSNNTP 180
           R   +  EA  K + E ++ K E D + + D+++RLE+E+  LK  +     +       
Sbjct: 688 RKETKELEALGKVEEERIKGKAETDVKYYIDNIKRLEREISELKLKS----DYSRIIALK 747

Query: 181 RGNSEGVKPQGETIAKMLRELDSYEESTEEDVNHDRECMICMRGEVSIVFLPCAHQVVCA 240
           +G+SE    + E++                 V  +REC++C+  E+S++FLPCAHQV+C 
Sbjct: 748 KGSSESKATKRESLGM-------------PKVKRERECVMCLSEEMSVIFLPCAHQVLCF 807

Query: 241 SCSDSYGKKGKAACPCCRVPIEQRIRVFGASS 264
            C+  + K+G   CP CR  I +RI+   A S
Sbjct: 808 KCNQLHEKEGMMDCPSCRGTIHRRIQARFARS 822

[Close]

BLAST of Carg26185 vs. Swiss-Prot
Match: sp|Q0WPJ7|RF298_ARATH (Putative E3 ubiquitin-protein ligase RF298 OS=Arabidopsis thaliana OX=3702 GN=RF298 PE=2 SV=1)

HSP 1 Score: 106.7 bits (265), Expect = 4.0e-22
Identity = 70/244 (28.69%), Postives = 124/244 (50.82%), Query Frame = 0


Query: 30  EMEALKLSASESVTTCLEVAKRRKKSLKRLLAWEKQKTQITEQIAEEKEKISRLQDEM-- 89
           E EA  + ASES  +C E  +R ++ LK   +WE QK  + E++  +++K++ LQ E+  
Sbjct: 569 EREAANIRASESAESCREAKERVQRLLKNSQSWEGQKNLLQEELKSQRDKVAGLQQEVAK 628

Query: 90  -----EMIKARWRQELNAKEAAMTQVEDERLRKEAAEASSKRKLEALRLKIEIDFQRHKD 149
                  I+A W+QE +A      Q    +  +   E   K + E ++ K E D + + +
Sbjct: 629 AKTRQNQIEATWKQEKSATGKLTAQAAALKKERGKLEELGKAEEERIKTKAENDVKYYIE 688

Query: 150 DLQRLEQELLRLKASAQS---------IDSHQPSNNTPRGNSEGVKPQGETIAKMLRELD 209
           +++RL+ E+ +LK  + S         ID +         ++   K      AK+     
Sbjct: 689 NIKRLDTEISKLKLKSDSLKIAALKKGIDGNNDXXXXXMNHTTNTKANSMASAKVWEN-- 748

Query: 210 SYEESTEEDVNHDRECMICMRGEVSIVFLPCAHQVVCASCSDSYGKKGKAACPCCRVPIE 258
              +  E  +  +REC++C+  E+S++FLPCAHQV+C+ C+  + K+    CP CR  I+
Sbjct: 749 --NQGAESKIKRERECVMCLSEEMSVIFLPCAHQVLCSKCNQLHEKEAMEDCPSCRAKIQ 808

[Close]

BLAST of Carg26185 vs. Swiss-Prot
Match: sp|Q5BKL8|XIAP_XENTR (E3 ubiquitin-protein ligase XIAP OS=Xenopus tropicalis OX=8364 GN=xiap PE=2 SV=1)

HSP 1 Score: 58.5 bits (140), Expect = 1.3e-07
Identity = 27/79 (34.18%), Postives = 43/79 (54.43%), Query Frame = 0


Query: 181 QGETIAKMLRELDSYEESTEEDVNHDRECMICMRGEVSIVFLPCAHQVVCASCSDSYGKK 240
           Q ET+ +  +E++   E     +  ++ C +CM   +SIVF+PC H V CA C+D   K 
Sbjct: 417 QKETVLEKPKEIEISLEEKLRQLEEEKICKVCMDRRISIVFIPCGHLVACAVCADVLDK- 476

Query: 241 GKAACPCCRVPIEQRIRVF 260
               CP C   +E+R ++F
Sbjct: 477 ----CPICCTIVERRQKIF 490

[Close]

BLAST of Carg26185 vs. Swiss-Prot
Match: sp|Q13489|BIRC3_HUMAN (Baculoviral IAP repeat-containing protein 3 OS=Homo sapiens OX=9606 GN=BIRC3 PE=1 SV=2)

HSP 1 Score: 57.0 bits (136), Expect = 3.7e-07
Identity = 26/57 (45.61%), Postives = 33/57 (57.89%), Query Frame = 0


Query: 203 VNHDRECMICMRGEVSIVFLPCAHQVVCASCSDSYGKKGKAACPCCRVPIEQRIRVF 260
           +  +R C +CM  EVSIVF+PC H VVC  C+ S  K     CP CR  I+  +R F
Sbjct: 551 LQEERTCKVCMDKEVSIVFIPCGHLVVCKDCAPSLRK-----CPICRSTIKGTVRTF 602

[Close]

BLAST of Carg26185 vs. TrEMBL
Match: tr|A0A0A0L411|A0A0A0L411_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G011800 PE=4 SV=1)

HSP 1 Score: 377.9 bits (969), Expect = 1.9e-101
Identity = 210/273 (76.92%), Postives = 230/273 (84.25%), Query Frame = 0


Query: 1   MENALRKASGGPCKFDSTT--TETENAEIRAEMEALKLSASESVTTCLEVAKRRKKSLKR 60
           MENALRKASG   + ++     E ENAEIRAEMEALKLSASESVTTCLEVAKR KKSLKR
Sbjct: 274 MENALRKASGQVDRANAAVRRLEIENAEIRAEMEALKLSASESVTTCLEVAKREKKSLKR 333

Query: 61  LLAWEKQKTQITEQIAEEKEKISRLQDEMEMIK-------ARWRQELNAKEAAMTQVEDE 120
           LLAWEKQKT++ EQIAEEK+KIS+LQD++EMIK        RWRQE+NAKEAAM QVEDE
Sbjct: 334 LLAWEKQKTKLQEQIAEEKDKISKLQDQLEMIKLDQKEAEVRWRQEVNAKEAAMAQVEDE 393

Query: 121 RLRKEAAEASSKRKLEALRLKIEIDFQRHKDDLQRLEQELLRLKASAQSIDSHQPS-NNT 180
           R  KEAAEASSKRKLEALRLKIEIDFQRHKD              SAQS +SH PS NNT
Sbjct: 394 RHSKEAAEASSKRKLEALRLKIEIDFQRHKDXXXXXXXXXXXXXXSAQSTESHHPSNNNT 453

Query: 181 PRGNSEGVKPQGETIAKMLRELDSYEESTEEDVNHDRECMICMRGEVSIVFLPCAHQVVC 240
           P+GNS+ VKPQGETIAKMLRELDSYE+S+E+DVN DREC+ICMRGEVSIVFLPCAHQV+C
Sbjct: 454 PKGNSDSVKPQGETIAKMLRELDSYEDSSEKDVNQDRECIICMRGEVSIVFLPCAHQVLC 513

Query: 241 ASCSDSYGKKGKAACPCCRVPIEQRIRVFGASS 264
           ASCSD+YGKKG+AACPCCRV IEQRIRVFGASS
Sbjct: 514 ASCSDNYGKKGRAACPCCRVTIEQRIRVFGASS 546

[Close]

BLAST of Carg26185 vs. TrEMBL
Match: tr|A0A1S3BJQ6|A0A1S3BJQ6_CUCME (MND1-interacting protein 1 OS=Cucumis melo OX=3656 GN=LOC103490797 PE=4 SV=1)

HSP 1 Score: 372.1 bits (954), Expect = 1.0e-99
Identity = 206/273 (75.46%), Postives = 228/273 (83.52%), Query Frame = 0


Query: 1   MENALRKASGGPCKFDSTT--TETENAEIRAEMEALKLSASESVTTCLEVAKRRKKSLKR 60
           MENAL+KASG   + ++     E ENAEIRAEMEALKLSASESVTTCLEVAKR KKSLKR
Sbjct: 497 MENALKKASGQVDRANAAVRRLEIENAEIRAEMEALKLSASESVTTCLEVAKREKKSLKR 556

Query: 61  LLAWEKQKTQITEQIAEEKEKISRLQDEMEMIK-------ARWRQELNAKEAAMTQVEDE 120
           LLAWEKQKT++ EQIAEEK+KIS+LQD++EMIK        RWRQE+NAKEAAM QVEDE
Sbjct: 557 LLAWEKQKTKLQEQIAEEKDKISKLQDQLEMIKLGQKEAEVRWRQEVNAKEAAMAQVEDE 616

Query: 121 RLRKEAAEASSKRKLEALRLKIEIDFQRHKDDLQRLEQELLRLKASAQSIDSHQPS-NNT 180
           R  KEAAEASSKRKLEALRLKIEIDFQRHKD              SAQS +SH PS NNT
Sbjct: 617 RRSKEAAEASSKRKLEALRLKIEIDFQRHKDXXXXXXXXXXXXXXSAQSTESHHPSNNNT 676

Query: 181 PRGNSEGVKPQGETIAKMLRELDSYEESTEEDVNHDRECMICMRGEVSIVFLPCAHQVVC 240
           P+GNS+ VKPQGETIAKMLRELDSYE+S+E+DVN DR+C+IC RGEVSIVFLPCAHQV+C
Sbjct: 677 PKGNSDSVKPQGETIAKMLRELDSYEDSSEKDVNQDRDCIICKRGEVSIVFLPCAHQVLC 736

Query: 241 ASCSDSYGKKGKAACPCCRVPIEQRIRVFGASS 264
           ASCSD+YGKKG+A CPCCRV IEQRIRVFGASS
Sbjct: 737 ASCSDNYGKKGRATCPCCRVTIEQRIRVFGASS 769

[Close]

BLAST of Carg26185 vs. TrEMBL
Match: tr|A0A1R3JEB9|A0A1R3JEB9_9ROSI (Zinc finger, RING/FYVE/PHD-type OS=Corchorus olitorius OX=93759 GN=COLO4_17067 PE=4 SV=1)

HSP 1 Score: 340.1 bits (871), Expect = 4.4e-90
Identity = 186/272 (68.38%), Postives = 219/272 (80.51%), Query Frame = 0


Query: 1   MENALRKASGGPCKFDSTT--TETENAEIRAEMEALKLSASESVTTCLEVAKRRKKSLKR 60
           MENALRKASG   + ++     ETENAEIRAEMEA KLSASESV TCLE+AKR KK LK+
Sbjct: 243 MENALRKASGQVDRANAAVRRLETENAEIRAEMEASKLSASESVKTCLEIAKREKKCLKK 302

Query: 61  LLAWEKQKTQITEQIAEEKEKISRLQ-------DEMEMIKARWRQELNAKEAAMTQVEDE 120
           LLAWEKQKT++ E+IA+EKEKI  LQ        + +  +++WRQE+ AKE A+ +VED 
Sbjct: 303 LLAWEKQKTKLQEEIADEKEKIKELQRCLGQIDQDQKETESKWRQEVKAKELALAKVEDX 362

Query: 121 RLRKEAAEASSKRKLEALRLKIEIDFQRHKDDLQRLEQELLRLKASAQSIDSHQPSNNTP 180
           +  KEAAEAS+KRKLEALRLKIEIDFQRHKDD QRLEQEL RLK SAQS + +  SNN  
Sbjct: 363 QHSKEAAEASNKRKLEALRLKIEIDFQRHKDDHQRLEQELARLKLSAQSTELNHQSNNLH 422

Query: 181 RGNSEGVKPQGETIAKMLRELDSYEESTEEDVNHDRECMICMRGEVSIVFLPCAHQVVCA 240
            G SEG KPQGETIA++L ELD  E+S+E+++N DREC+IC + EVSIVFLPCAHQV+CA
Sbjct: 423 TGKSEGAKPQGETIARLLHELDKLEDSSEKEINCDRECIICSKDEVSIVFLPCAHQVLCA 482

Query: 241 SCSDSYGKKGKAACPCCRVPIEQRIRVFGASS 264
           +C+DSYGKKGKA CPCCR PIEQRIRVFGASS
Sbjct: 483 NCNDSYGKKGKATCPCCRAPIEQRIRVFGASS 514

[Close]

BLAST of Carg26185 vs. TrEMBL
Match: tr|A0A2P5C7L1|A0A2P5C7L1_PARAD (43kDa postsynaptic protein OS=Parasponia andersonii OX=3476 GN=PanWU01x14_176560 PE=4 SV=1)

HSP 1 Score: 339.3 bits (869), Expect = 7.5e-90
Identity = 182/272 (66.91%), Postives = 220/272 (80.88%), Query Frame = 0


Query: 1   MENALRKASGGPCKFDSTT--TETENAEIRAEMEALKLSASESVTTCLEVAKRRKKSLKR 60
           MENALRKASG   + ++     ETENAEIRAEMEA KLSA+ESVTTCLE+AK+ K+ LKR
Sbjct: 462 MENALRKASGQVDRANAAVKRLETENAEIRAEMEASKLSAAESVTTCLELAKKEKRCLKR 521

Query: 61  LLAWEKQKTQITEQIAEEKEKISRLQDEMEMIK-------ARWRQELNAKEAAMTQVEDE 120
           LLAWEKQK ++ E+I +E+EKIS++Q  +  IK        +WRQEL AKE A  Q+E+E
Sbjct: 522 LLAWEKQKARLQEEIKDEREKISQVQQALSRIKQSHKETELKWRQELKAKELASAQLEEE 581

Query: 121 RLRKEAAEASSKRKLEALRLKIEIDFQRHKDDLQRLEQELLRLKASAQSIDSHQPSNNTP 180
           R  KEAAEAS+KRKLEALRLKIEIDFQRHKDDL RLEQEL RLKAS+Q  +SHQPSN   
Sbjct: 582 RCLKEAAEASNKRKLEALRLKIEIDFQRHKDDLLRLEQELSRLKASSQYTESHQPSNALS 641

Query: 181 RGNSEGVKPQGETIAKMLRELDSYEESTEEDVNHDRECMICMRGEVSIVFLPCAHQVVCA 240
            G+ EG KPQGETIAK+LRELD+ E+S++++ N DREC++C++ EVS+VFLPCAHQV+CA
Sbjct: 642 TGSFEGAKPQGETIAKLLRELDNLEDSSDKEANSDRECIVCLKDEVSVVFLPCAHQVMCA 701

Query: 241 SCSDSYGKKGKAACPCCRVPIEQRIRVFGASS 264
            CSD +G KGK  CPCCRVP+EQ+IRVFGASS
Sbjct: 702 GCSDDFGLKGKPTCPCCRVPVEQKIRVFGASS 733

[Close]

BLAST of Carg26185 vs. TrEMBL
Match: tr|A0A061G2E4|A0A061G2E4_THECC (RING/U-box superfamily protein isoform 1 OS=Theobroma cacao OX=3641 GN=TCM_015744 PE=4 SV=1)

HSP 1 Score: 339.0 bits (868), Expect = 9.8e-90
Identity = 187/272 (68.75%), Postives = 219/272 (80.51%), Query Frame = 0


Query: 1   MENALRKASGGPCKFDSTT--TETENAEIRAEMEALKLSASESVTTCLEVAKRRKKSLKR 60
           MENALRKASG   + ++     E ENAEIRAEMEA KLSASESV TCLEVAKR KK LK+
Sbjct: 449 MENALRKASGQVDRANAAVRRLENENAEIRAEMEASKLSASESVKTCLEVAKREKKCLKK 508

Query: 61  LLAWEKQKTQITEQIAEEKEKISRLQ-------DEMEMIKARWRQELNAKEAAMTQVEDE 120
           LLAWEKQKT++ E+IA EKEKI+ LQ        + +  +++WRQEL AKE A+ QVE+E
Sbjct: 509 LLAWEKQKTKLQEEIAIEKEKINELQRCLARVEQDQKETESKWRQELKAKELALAQVEEE 568

Query: 121 RLRKEAAEASSKRKLEALRLKIEIDFQRHKDDLQRLEQELLRLKASAQSIDSHQPSNNTP 180
           R  KEAAE ++KRKLEALRLKIEIDFQRHKDD QRLEQEL RLK SAQS + +  SNN  
Sbjct: 569 RRSKEAAEVNNKRKLEALRLKIEIDFQRHKDDHQRLEQELSRLKVSAQSTELNHQSNNLL 628

Query: 181 RGNSEGVKPQGETIAKMLRELDSYEESTEEDVNHDRECMICMRGEVSIVFLPCAHQVVCA 240
            G SEG KPQGETIA++L ELD  E+S+E++VN DREC+IC + EVSIVFLPCAHQV+CA
Sbjct: 629 TGKSEGAKPQGETIARLLHELDKLEDSSEKEVNCDRECIICSKDEVSIVFLPCAHQVLCA 688

Query: 241 SCSDSYGKKGKAACPCCRVPIEQRIRVFGASS 264
           +C+DSYGKKGKA CPCCR+PIEQRIRVFGA+S
Sbjct: 689 NCNDSYGKKGKATCPCCRMPIEQRIRVFGAAS 720

The following BLAST results are available for this feature:

BLAST of Carg26185 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022923356.1	2.2e-125	92.28	MND1-interacting protein 1 [Cucurbita moschata]	[more]
XP_023552320.1	3.5e-123	90.44	MND1-interacting protein 1-like [Cucurbita pepo subsp. pepo]	[more]
XP_023007713.1	1.0e-122	90.44	MND1-interacting protein 1-like [Cucurbita maxima]	[more]
KGN55779.1	2.9e-101	76.92	hypothetical protein Csa_3G011800 [Cucumis sativus]	[more]
XP_011650349.1	2.9e-101	76.92	PREDICTED: MND1-interacting protein 1 [Cucumis sativus]	[more]

BLAST of Carg26185 vs. TAIR10


Match Name	E-value	Identity	Description
AT1G32530.1	1.3e-52	50.00	RING/U-box superfamily protein	[more]
AT2G35330.1	2.0e-48	44.49	RING/U-box superfamily protein	[more]
AT1G03365.1	1.7e-23	31.25	RING/U-box superfamily protein	[more]
AT4G03000.1	2.2e-23	28.69	RING/U-box superfamily protein	[more]
AT1G73950.1	1.6e-08	35.71	Transmembrane Fragile-X-F-associated protein	[more]

BLAST of Carg26185 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|Q8RX22\|MIP1_ARATH	2.4e-51	50.00	MND1-interacting protein 1 OS=Arabidopsis thaliana OX=3702 GN=MIP1 PE=1 SV=1	[more]
sp\|Q9ZVT8\|RF4_ARATH	3.1e-22	31.25	Putative E3 ubiquitin-protein ligase RF4 OS=Arabidopsis thaliana OX=3702 GN=RF4 ...	[more]
sp\|Q0WPJ7\|RF298_ARATH	4.0e-22	28.69	Putative E3 ubiquitin-protein ligase RF298 OS=Arabidopsis thaliana OX=3702 GN=RF...	[more]
sp\|Q5BKL8\|XIAP_XENTR	1.3e-07	34.18	E3 ubiquitin-protein ligase XIAP OS=Xenopus tropicalis OX=8364 GN=xiap PE=2 SV=1	[more]
sp\|Q13489\|BIRC3_HUMAN	3.7e-07	45.61	Baculoviral IAP repeat-containing protein 3 OS=Homo sapiens OX=9606 GN=BIRC3 PE=...	[more]

BLAST of Carg26185 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A0A0L411\|A0A0A0L411_CUCSA	1.9e-101	76.92	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G011800 PE=4 SV=1	[more]
tr\|A0A1S3BJQ6\|A0A1S3BJQ6_CUCME	1.0e-99	75.46	MND1-interacting protein 1 OS=Cucumis melo OX=3656 GN=LOC103490797 PE=4 SV=1	[more]
tr\|A0A1R3JEB9\|A0A1R3JEB9_9ROSI	4.4e-90	68.38	Zinc finger, RING/FYVE/PHD-type OS=Corchorus olitorius OX=93759 GN=COLO4_17067 P...	[more]
tr\|A0A2P5C7L1\|A0A2P5C7L1_PARAD	7.5e-90	66.91	43kDa postsynaptic protein OS=Parasponia andersonii OX=3476 GN=PanWU01x14_176560...	[more]
tr\|A0A061G2E4\|A0A061G2E4_THECC	9.8e-90	68.75	RING/U-box superfamily protein isoform 1 OS=Theobroma cacao OX=3641 GN=TCM_01574...	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR001841	Znf_RING
IPR013083	Znf_RING/FYVE/PHD

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg26185-RA	Carg26185-RA	mRNA

InterPro

Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 130..164
None	No IPR available	COILS	Coil	Coil	coord: 59..121
None	No IPR available	PFAM	PF13920	zf-C3HC4_3	coord: 206..254 e-value: 3.8E-13 score: 49.0
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 158..177
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 158..181
None	No IPR available	PANTHER	PTHR10044:SF133	MND1-INTERACTING PROTEIN 1	coord: 1..261
None	No IPR available	PANTHER	PTHR10044	INHIBITOR OF APOPTOSIS	coord: 1..261
None	No IPR available	SUPERFAMILY	SSF57850	RING/U-box	coord: 200..255
IPR013083	Zinc finger, RING/FYVE/PHD-type	GENE3D	G3DSA:3.30.40.10		coord: 185..260 e-value: 2.7E-16 score: 60.7
IPR001841	Zinc finger, RING-type	PROSITE	PS50089	ZF_RING_2	coord: 209..249 score: 10.409

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Carg26185	Cla008790	Watermelon (97103) v1	carwmB0497
Carg26185	Csa3G011800	Cucumber (Chinese Long) v2	carcuB0526
Carg26185	MELO3C013861	Melon (DHL92) v3.5.1	carmeB0503
Carg26185	ClCG10G001770	Watermelon (Charleston Gray)	carwcgB0487
Carg26185	CSPI03G01830	Wild cucumber (PI 183967)	carcpiB0534
Carg26185	CmaCh16G011470	Cucurbita maxima (Rimu)	carcmaB0697
Carg26185	CmoCh16G011980	Cucurbita moschata (Rifu)	carcmoB0677
Carg26185	Lsi07G012150	Bottle gourd (USVL1VR-Ls)	carlsiB451
Carg26185	Cp4.1LG14g09520	Cucurbita pepo (Zucchini)	carcpeB0702
Carg26185	CsGy3G001700	Cucumber (Gy14) v2	carcgybB0503
Carg26185	MELO3C013861.2	Melon (DHL92) v3.6.1	carmedB0508
Carg26185	CsaV3_3G001870	Cucumber (Chinese Long) v3	carcucB0532
Carg26185	Cla97C10G186400	Watermelon (97103) v2	carwmbB0524
Carg26185	Bhi11G000121	Wax gourd	carwgoB0606

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:

None