Carg26074 (gene) Silver-seed gourd | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Carg26074
Type	gene
Organism	Cucurbita argyrosperma (Silver-seed gourd)
Description	Histone H2A
Location	Cucurbita_argyrosperma_scaffold_145 : 110694 .. 125195 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGATCTCCAACTCCTTCAAAGCTGCACTCCAATGTCTAGATGGAAGAACTAGACGGTACCTTAAGAAAGGCCGCTACGAAAAGCGCACTAGCGTAGATGCTCTGATCTACCTAGTTGTCGTCCCCAAATACCTTGCTTCTATGGTTTTGAAATTGGCCACCAATGTAACGCGTGATAACAAGAAAAATAAGATAAACTCTAGACATGTTCTTCTAGCTGCGAAGAACGACGAGAAACTCAAAATTGCTTCAAGAAGTCACCATTGCTAACGATGAATTTCTTCCAAACATCAATCGATTCTCTTTCAGTGAGTACTAGAGGGGCAAACAACGCTCGTGAAAATATTCCAAGAGAAGTGAGCACGAGAGAGACAACCAATATTCGTAGAAGTGCTCTAAGAGGAGTGTGCACAATTGAACCAAGTGGAAGTGCTCCAAGAGGAGTGAGGATGAGAGAGAAAAGCAACACTCGTGAAAGTGCTCCAAGGGGCATATGCATGAGTTATGTTCTCTCAAAGCTTCAATGACAAATGTCCTAGCAAATGGATTTCACACCTTACTGTTTTATGAGTTAGTATCCGACCCGAGAATAAATTATATCTATTACATCTTGATATAAGGAATATTTGTGTATTCCCATTAAACCATTACTAATAAGAAAAGTTGGGCTATAGTCTTTTTTAATAAGATATAAACTTTTTCAAACAGTGTTTTCGTAAGAGGGTTGTGCACCTTTATTTTCATGAAAGCTTCTGATGGAAAGAAGGGAAAAAGATATAGCATTCTTACCCATTCAAGTAGAAAAACTCTGTCCTCCTCCAAGCCTGGGGCCGAATTTGGCCTACCGCTAACAATTTCAAGAGCCACAACACCAAAACTAAAGACATCAGCCTTCTCAGTTAGATGCCCACGCATGGCATACTCAGGTGCAAGATATCCACTGCATTAGTAAACATTAATGCTCTACTTTAGTACAACTATTTTAAAGTAATAACTTTCATGGGGTGGGGAACTTATCTCAATGAAATATTACATTGTTCCAGCAACAAGGGTGCTCATATGAGTCTTTTTGTCATCATAAAGCTTCGCTAACCCAAAATCTGAAATTTTGGGGTTGAGATCAGCATCAAGTAGAATGTTACTGGCTTTGATATCTCTATGAACAATTCGAAGTCTCGATTCCTCATGAAGATATGTTAGGCCTCTCGCGACACCCATGCATATAGCAAATCGTTTTGGCCAATCAAGAACGAAAGTTCGTTTTCCTATCTCACAAAAGCCAGCAAACATTACCACTTTTGTATAGCAAATTAAATTAAAAAGAAAGAAAAACACAATTAGGTTGTTAGTTTACCAAATAATGCTTGGTCGAGACTCTTTTTCTCCAAGTACTCATAAACAAGGAGACGTTTTTGACCCTCAATGCAACAGCCATACAACTTCACAAGGTTGCGATGTTGCACGGCAGATATTGTAGAAATCTCAGCCAAAAACTGGTTTCTTCCTTGGTCAGATTTTATTGAAAGTTGCTTTACAGCGATTACTCTTCCATCATTTAGAATTCCCTAAAAGAAAGAAGAAAACAACACAACCATGAAAAGACGCGAGCATAGTCCGAAGGACCTTTTTAAGAAATGAAATATTTTAGGAATCACGACTCTCCACAATGGTATGATATTGTCCACTTTGAGCATAAGCTCTCATGACTTTGCTTTGGGCTTCCCCAAAAGGCCTCATGCCAACAGAGATGTATTCCTTACTTATAAACCCATGATCATTCCCTAAATTAGCCAATGTAGGACTCCCTCACAACAATCCTCAACAAAATATACCTTGGTAACCGGTCCAAAACCTCCTTCTCCGAGTTTGTTGGATGAACTAAAATCCTCTGTAGCATTCCTGAGTTCAGAATAACTAAAAGTGTGCGGTCTTTCATCAATTCCAAAGAGCTCTGCAGGTAAAGAATATAGGTTATTGATTGTGCAACTAAACATATTTGTTATATAAAGCACTTTTTAGAAAATGTAATAATAAAAATATTTTCATTGAACATACTTTTTTAAAAGTGCTTAGATTAGAAGGTATTACAAACAAACCCTTTTTTCAAAAGTGCTTCTAGAAAAGTGACTCAAAGGCAAAGAACTAATTTGATGTAGTAAGCTTTAACCACCTTCATCTTCCAAGGAGCGTCCTTTCCTTCTTTGAAAAAGAATGAAAATTGTGACAACTAGAAAGCAAACAAATCCTACACCAACAACAATCCCCACTATTAGACTGGCTTCATTCTTGTGACTACCAGTCCCCTTTATTTCACTGGTTCCATTCTTCACATTACTTACAGGTTCAGAATCTGCAAAAAGCTCTCCATTTAATTGAGAAGTACGTCATAACAAGCTTTTAAAAAATAATAGAGATATGAATGGTCCCATTACTCATTACCTAGACTTGCACTGATTGCTGAAATAGAAGGTCCATAAGTACCTTCGTCAGGTATGCAGCAAGTACCTTTCCCAGCCCAAAAAAGATGAATTTCCATGTAGTTTTCTGAAACTTGTGCCTTAAATATCTTTGTAACAGCACGAAAAGACCCACCTGCCTCATTTTGAATATTAAAATCTTTGAAAACCCGGTTCCCCTGAGAACAATGATCTTAAACTCAAACAAGATGGAATAATAGATCAAAGCAAACGACAATCAGATTCTAAAGGAGTTATAGATGATAGAAGTTAAACTAGATTCATGATACATATACATGAACTTTTAAATTATAGAACCATGAATTCCAAAATAGAAGTTCTATTGCTAAAGCATATTATTAGTATGTACCTCTAGTTCTATTGCTAAAGCCAGTAGGAGACACCTCATAACATCCATCTAAAATAAACTTAAATCGTCAAAAACAAAATAGATAACCTGAATATATATATCAAAGACACGCCTCCCAAGGCTGCTCCATGTAGATGAATCTGCGAAAGCATGTTCTGCAAAGTGAAGCTTCACAGTGTAGTTCCCATTTTTAAGCTCTAGACCATAAAATCTCAACGACGAAGTAGATAATTCTTGTGTCTGAAAAAGGTCTGAATCATTTGTATTTGCAATTGGATGTTCCGTGTCATTGTATCTGTTATATTGACTAGAGTTTTTGTTGATCTCAGGAAAGTATCCAACATCACTAACAGCCCAAGTTTCTGAGTCACTAACATAGTATGAAGCCATACCATCAATCTCAATTTCCCTTTCATACTCCTGAGAGGAACTCTCAAATTTTGGACCCCCACAGTTGATCCCAAAACTAGGACCTATAATATGCATAAGAAAGATTATGAGAAGATATCCATCCATTAAACAAAACAATAAAACCGTATGAAGATGATGTAGACTAGCTAAGGAACTCAATGACAAGTAGAGAAATAAACCCTCCCCGCCCTCCCCCCTCCCCCCCCCCCCCCCCCCCAACTCCTTGTAGGTTCAAATTTTTTATTCAGTATGAACTTGAATTTAAGTATTTCCATAATTATATATTAAAAGAACAAAAACAAGTCTCAATTAGTTCGTCCCCTCCTTTGTAACAAACAAGAGAAACACATATTTTTCATTTAACTCACGGAGTTCAGAAGCTTGATTACAAGAAAATTCTCGTCGAAGACAGTTCAAACCCGTAGGGAAATGGCTGAAAGCAAGAGAAAAATGTACTAAGACAAGCAATACAGCAAGATATTCAATAGTTTAATTGGCAGTTGGTACACATGAAAATTAAAGATAGTACACAAACTCATTGAATTACCCAGTATGTGATGTTCCAAACGTGAAGTTGTTGGCAACTAAATTTCTGCAAATCATTCCCAACAAAAATTATATTCTTAACTCCATTCCATCCAAATTTTTAAGAACATGTTAAAGAATGTGTATTCGCATGATTGTAAAGAAAAATAAACGAGTAGCATCTAAATTACAAATGCTTGGCTGAATCCTCATCGACCCAGTCAGGAAAGCTACCCGATAAACCATTGTATGATAAGTCTCTACAAGCATCATGTGGAAGGTGTAAGCGCATAAGACAAACGTTAATGGCCATAATAAATAGATGCACTAATCAAGACAATCATTCGACTTCAATTGGAAAGTGTTTCAAATGGACAACCGATTCTGTGATTACTGAAATCAACAATTATAAGAACTTACATGCTAAGAAGATAACCAGGCTTTTCTGAAGGTAGCGTACCAGTTAACTTGTTATTTCCAAGAAACCTGGAAAAAAGACCAATAATACACCAATCAATACAACAGAAAACATGGACAAATTTACATGTTCATGCAAGAAAGATGTATTACAAGTATCTTAGCGAATTCAACTTGAAAAGTGACTTTGGAATCTCTCCCCATAACTCGTTAAAGCTTAAGTCTCTGCAAGGAAAATAAGATCGATGTTAAAATATTATCAAAGGAAAAATATAAAAAGATCACAAAAATAAATATAAAAATAAAGAATATGACCCTCTCATGGTTCAAAACAACCCATGAAAATAAAAGTAACAAAAAAAGGTATAATAGACTAGTAAAAACATGACTCAAATTTTCTATATACAGGGGTTCTGGTTGAGGATTGTTGGGAGGGATTCCCACATTGACCAATTTAGGGAATGATCCTGGGTTTATAAGTAAGGAATACATCTCCATTGGTATGAGGCTTTCTGGAGAAACCTAAAGCAAAGTCATGAGAGCTTATGCTCTAAGTGGACAAATATCATATCATTGTGAAGAGCCGTGATTCCTTAACTTAGTCATGTTAATAGAATCCTCAAATGTCGAACAAAGAAGTTGTGAGCCTCGAAAGTGTAGTCAAAAGTGACTCAAGTGTCGAACAAAGGGTATACTTTGTTCGAGGACTCCAGAGAAAGGAGTTGAGCCTCAATTAAGGGGAGGCATTCGAGGGCTCCATAGGCCTCAGGGGAGGCTTATAGTGTACTTTGTTCGAGGGGAGGATTGTTGAGGATGGTTGGGAGGGAGTCCCACATTGACTAATTTAGGAAACGATCATGGGTGTAAGGAATACATCTCCATTGGTTTGAGGCCTTTTGGGGAAGCCCAAAACTGAGCTCGACAATATCATACCATTGTGGAGATCTGTGATTCCTAACAGTTCTATCTCATTTCAAAATTTGGTTACCACATCAACATTCTGGTAAAAAAAGGACAAAATCCCTTTTTAGGTTGAGGTTATCGCAGAACAGAAACAACCTATTCAAAATATTTAAGCTCAGTTGGTTTGCAAGCAAGCATATCCAACCAAGCTCATTACCAGCAAAACAGGCATTTATACATCAATTTATTAACAATTAATTCTTACAGCAGGCTCAATTCTTTAAACTCTTCAATGTAGGTAGGAATTGTATCTGATATCTTATTATTTCTCAATACTCTGCAAAAATAAAAAGAACATTATCAGGTTCAGAAGATTGTAAGAAAATTCCCCATAAGGAAATCAAGAGCAATCTAATAAAGGTTGGTGTTAACTTACAAGGTCTTCAAAGATGTCATTTTCCTGATAAATTCTAGGGACGATCTCCCATTTGATAAATCACCAATTCTCCTTCATGAAGTTTATCCAATGACATAATTACAATAAAGAACCTTTTTCTTGGGTCATTTTATATTTCATTCATTTAAATTGCAATTAGCTTCTTATATACATAAAATGTTGAACTAGGGAGAATGCAAAAAATAAACAAAAATTTAGAAACTATTGATCACTCACAACTCATTCATAGCTGTCAATTTTGAAAATGTCAAGGGTATGGGACCCATGAAAGAGTTTCCTTGAAACCTCCTGCAATAGCAAGTTGATAATATATATGATGAGCTTATTGTAAAGCAAAGAAATCTTATGGAATACCATCAGGTCTTTGGAACAAGAGCAGTTTTTAGTAGTTCTTCGACTGTTTAGAGTATAGGCTAGGCAGCTTAGGAGGATTTGGAATCTTAAACTAGCCCATGTTTGGGGTGAGAGCTTGCAAAGCTCAAGTTGGATTTGGCCAACCCAGGCACTGTTCATCCCTAACCAACACCCAAGCGAAGGATGAGAACACTTAAAAAGGGCTAGAGCTCCCACAACCTTACCAATATCCAAAATGATCCAATATTCTCCCACAATCTGACCAATACCTAAAAAGATTTGGTTTGAGAGAAATAAAGGGTTTCAAGTCGTCTGGTCAGAAGATATTTGGGGTTCTATTAGAACTATGCTACCATTTTTTTTTTTTTTTTTTTTTTTTTTTTTAAAGAGAAAATTTCATTGATGTTTTAAAATTTACCAAAGGGATGTGTTATCCATGATATTTACAAAAAATCTCTCAATTTTCGATAAGGGAGGTATGGCTATAGAAAGCAAAAGTATTAGATAAAAGCTGTTTACTGCTGAATAATTAGGAAAGAGAGGACCCTTTTAGGACGACAGCACCCTTGCTATAATTTTGCATAGTCCACTCATAAGACTTATAGGATGAAAGTAAACAACAATGCATGCATCCATTTTCTTTGAGATCAAATAGATGTATGTTTCATTTAAGTTGTCATTGATAATTCCATTCTGAAAAAAATATTGGAACACTCTCATGATGTCATCTCTCAGATTGTTCCAACATTTTTGTTAAAAATCTCGAGTAAAATCATCTGATTCGGGAGTTTTGACGAAGTCTAGGAATTGTATCACCTTCCCTACCTCTTCTACAATGAAAGCAACCTCGAGGGAAGTTGCTTGTTGTTGGTCAATTGGACTACAATCAAGATCAGGACGTGTAAAGGACACAAATTTTGACATAACTTCATCTTCATTTACTAAACTTCTACATTGTATTGATAGAATTTCCATGATGATACCTTTTCGTTTCTTTAATGCCATAATACAATGGAAAATTTTGGAGTTTATGTCACCATTCTCTAGCCATTGTTTTTAACATTTCCTTTGCTGCCAACGATATTAGTTCTACTTTCTGTTAAAATGTCATCACTAGCCCAATAGTGTTAAGCCCAACCATGGTATGAGTAATTATATTTATGATTTAGGATTTTAGAAATAAATTTAGGAAAATGATTTAGTCATTCTAGAAAAAAGATTGAGAAATTTTAGGAATAGATTTACTACCCCTCCATCCTACTTATTCATCATCCCAAGAAATCCTAAGAAATTACAAGCAATACAAAGGAGTAGTTTCTACCGAGTGTCTAGTAAATTAAAAGTGTGCGAGTGTTTCCCACATAGAGTTGTGTTCAACACTTTCGTGAGCATATTATGTGTGTGTTGAACTACTATGATAGAGTCCGTTTCCTCAATCGAGAGAACTCCATTTTAAGCATTCCGCTGGATTCTTTCCAATCTTCTTATTTTATGATCTCACTGGAAATCATATAAAAACAATTCCTATTTAATATAGTGACTTGGGCAAGTTCAGTGAGGAGTTGGTTTTTTTTTTTTTTTTTTTTTTTTTGTGGCAATACAATCAAAAACCTCATTGTTTCATTTCTTCAAGACTTCTTTTAGCCTTCGAAGTTCGTTGATGAAACCATGCCCCAACCATCCACAGAGGGGCGTGTTCTTCCACTAGTATTCTAACATGGGCAAAAATTCAAAGTGACTCATTCACATTTTCTCGAAATAGAAGGGCAAGGGGCCCATTTATACAACCCATGGAAAGTGCAATGGGATAATGATCAATGTAAGTCTACTCAATCTTCGGACACCGGTGTTACTAAATTTTCCTAGGAGACATTTTGTAGCTAGAAATTTGTCGATGAGTGTCAAGGTGGGTAGGGATCTATTGTTTGATTAGGTATAGAGATCATTACTGAGAGGAAGGTCAATAAGTTCAGCTTCTCTTATGACGTTATTGAATTGTCTCATGCCTTTGGTGACTTTTCCATTGGATTTTTCATTTGTCCACTGAGAAATATTGAAGTTGTTCACCAGAAGTCAATTCTCTGTGGCAAGATAGGTCATGTAATTCCTGTTAGAAGAGATGTCTTTCTTGATATCTACCGGGGCCATAGATCTTTGTAAACCAAAAAATGTAATCATTGACCAATGTAATATGTGTGGTTAGGGTATAAGGACATTAAATGACTTCAGAGATGATCAGAGTTAGGTCATACCACGTTATTAAGATCCTCCCGATGTTTGTGAGACATCCAAAGATGTCCAACCAATATGTCTAGCACTCCAAAGGGAATTAACCATCTGGAAATCAACCCAATTCAATTTTGTTTCTTGAAAAATGACCATACAGTGGGGATTGTATTTGAGGAGAAAGGCCTTGATGAGGGCTCTCTTTTGCCCATCTAAGTCTTTAACATTCCAAAAGATGATAATCATAAAAGGTAGATGCCGCATCTAGTGAGATCCCACGTCAGTTGGAGAGAGAAACAAAGCATTCCTTATAAGGGTGTGGAAACATCTCCCTAGCAGATGCATTTTAAAATCTGTGAGGCTGACGGCGATACATAACGGGCCAAAACAGATAATATCTGCTAGCAGTGGGCTTGGGTTGTTACACATCTAATTGTAACTTGCTAGATTTCTCATAATTAATGTTCGAAAGGAGGCCAGCGATCTCCCTAGTCAATTTACTAGTCAATTTGCTATGTTTCTTGACTGTAGTGGCCTTCTTTTTCCGAGATGAAATATTTATGATGCATATGTGGTGTTCTTTTAGCCCTGGTTCCAAGATTGGATGGTCGTTGATAGCATGAGTTTTACCAGTATCGAGTTGACTTCTTCTACCTCTGCTTCATTCTGGTTTTCCTGGAGAAAAGTGGCAAGCTTTGTATTTGCAAAGATAATTTTCGGCGGCAGGAGAGAGAGATTCAGCACATTCGCAGTGTTAAGAACAAAGAGAAAACTAAAAAGATCAGAAGAATGGGGAGAAATCTCACACTCTATTGAAGAATGAAATTGGCTATTATATAGCGTTATAGAATACACAAAAAATAAGGAAATCTAAATCAAATAACTAAATCAAATCTAATTCAAATAACTATATTAAATCTAAATCAAACCTAACAATTCCTCCCTTAAACCGAACACAAACACTAATCAGTTTACATCTATATCACAACAGACTCCCAATAGTCCTCTTTCCATTTTACTCTAACCTTCTTTCAGCCCTCAAGTAACTTCATGAATTCTCAAGTGCCATTTCTGTTTATTGCTTCCATTTCCAGATCAAAGACTTATTGCTTCCATTTTCAGATCCATGACTTGCCTCCATTTCTCACTCTTCAATGGGTCTTCAAAGTTTACAGGATCAGTAGTGGTAAACATGGCTGAGTGAGATTCATTATCTTCTTCAGAAAGATCTTCTCCTGTTGCATAGTCTCTCATCCAGACTGGTGGTCTCCTATTCCTCCCCTTATTCGAGCTAGGAGAGCTTGCTTCAGCCAAAACACATCTGTTGCCTCCTCTTGATCACCCCATTCCAGATCGCACATAATGGATTCTTCATAGATCTTATCCCAGTCCCAACTCTTATCTTCCCCGAATACAACATCCCTACTTACTATGATCCTTTGTGAAGTTGGATCAAAGAGTCGGTAAGTCTTTGACTCTTCACTAACTACTAGCAAAACACAACTCAAACTCTTATCATCCAACTTAGTTCTTATACTGTCAGGCACATGAACATGAGAGATGCATCCAAAAACTCTAAAATGCTCAACTAAAGGTTTGACTCCACTCCAAGCTTCTTTTAGAGTTTTATTCTTGACAGCCAACGTTGGACTTCGATTCAGTACATGCACAGTCCAATTGACTACTTCAGGCCAGAAACTTTTCGAAATTTTCTTTTCTGAAATCATACTACGAACCATATTCATAATAGTTTTATTTCTTCGTTTCACAACTCCGTTCTGTTGTGGCGTGTAGGCAGTTGTCAGTTGTCTTTGTATACCATTTACATCACAAAAATTGGTGAATTCTTGTGAGTAAACTCTCCTCCTCGATCAGTTCGCAAGGCTTTAATAAATGAGTTTGTTTCCTTCTAAACATGAATCTTAAAGTTTTTAAATACAGCTAAGGCTTCCGATTTTTCCATTAAGAAATAAACCCATGTTTTTCTGCTGAAGTCATCTGTGAAAGTAATCAAGTACCTTTTCTTACTGTTTGAGATGGGTTTGATCGGTCCACAATATCAGCATGCACCAATTGGAGAATTTGTGAAACTCACCATGTGCTCCTTTTTGGAAACGAGTGCCTTTGTTGCTTACCACTAGACAATTTTTACACAGTCTCAATGGAGACTTGAGCTGTGGTAAACCATCCACCTCTTCTTTTGCTGAAGAGTCTTTAATCCGTCCATATCTACAGTGCCAAAGTTGCTCAATATCTTCTGTGATTGTATTGAAATAAGTGGATGCTAAAGGCTGAGATGTAGCATGCATGACGAACATTCGATTCAAAGACATCTTTGTCTCCATGATTAAGCCTCTCTCAGGATGAAACACCTTGCACGTTCCATTTTAAAACAAAATGATAAGCCCCTTTGCTTGCAATTTCCCAATACTCAACACATTGTTCTTCAGCGCTGGCACATAGAACACTCCTGTGATTATCTGTATGATTCTATTCGCTTGCAGCCGTACATTACCCTTTCCTGTTACAACCATGCTTGAGTTGTTGCCCAGCTTCACTGAATCTCTGAAACTTCCATCAAAATCTGAAAAATAGTCCTTCTTCCCACACATATGATTGCTACATCCCGAGTCAAGGAACCACATATCTTCTCTATTAGCCTTATTCATATTCACGTAAGCCATCAGCAACATCCCTTCTTGAGTCTCTACATAGTTTGTCTCCTTCTCCTTGCTTTGACATTCCTTTGAAAATGTCCTAGCTTGTGACACTTATAGAACTCCACTGTGGCCCTGTTGAAGGTTTGTCTGTCTCTTCCCCTTCCTCTGCCTTTAAAACTTCCACGACCTTGACCCCTTCCTCTAGATTGTTCACCATGAGTGATCTTCAAAGCGTGTTCTTCTTCAACATGAGAACTCATGCATTATTCATGCACAAGCAGGCTGCTTTGCAACTCATCAATGGTTAAGATGGTTGTATCCTTGGACTCCTCAATGGAACACACAATATAATCTCAGAACCTTTTCAACTACTTCAACATCTCCTTTGTTCTCACCATTTAGTTTCATTTTGTTGGATATGCTAAGGGTCCGAGCAAAGTACTCATCCACAAATTCTCCTGACTTCATGTGAAGCATTTCAATCTCCTTCCAAAGAGCTTGCAAATGTGCATGCTTTACACGTGTCGAACCTTGATATTTCTGCTTCATAGAATCCCATATGTTCTTTGTTGTATCCTTGTTGAGGATTGTCTCCAAGATCGAACGATCTAATGCTTGAAATAGGCAATTCTTTGCTTTCAAATCTTTCAACTTCTGATCTTCAATGTGCTTCTTCTGGGTATCTGTGAAAACAATGTCTTCTATTGCTGTAGGAATCCCATTCTCCACCAAATCCCAGTACTCCTTTGAATGCAAAAGTTTTCCATGAGCATCGTCCAATGATCATAGTACCCATCAAATTTCAGAATTGCAGGTTGCACAAATGAACTCTCCATGGACATACTTTTATTATGACACATGTAGAAGACTGCTACTTCTATTTTTAACTTGGCTAAGTTTAGGGCATGGCTCTAATACCAAATGTTAAGAACAAAGATGAAACTGGAAAGATCAGAAGAATTGGGAGAAATCTCACCCCTATTGAAGAATGAAATTGGCTATTATATAGCCTTACAGAATACACGGAAAACAATGAAATCTAAATCAAATAACTAAATCAAATCTAATTCAAATAACTAAATCAAATGTAAATCAAACCTAACACGCAGTAGGGGATGCGGAGCTGTGGAGAGGAGAAGAGAACTAGATGTATATTCGTCATCGGTTTCTTGGTGAGAGCTAATAGTGGAGAATTTTATTCTAGGGATGATGAAGGTTAAGACGAGGAAGGTTTTTTGGTTCTTTATGATGATGGCATGTTTTCCTTGTTATGCTATCACAACTTGTGGATCGGAAATAAGAAGTGGTATAGTAGATGGGATTGTGGAGGTTGACGAAAAATGGGGTGGGGAGCTAGTGGCCTTTAGTTTATGTGAGCAAGGTGGACTTTCATTTATGGAGGTGGGTTAGACGAATGGGAAATATTTGGCTCCATGACGCATGGTCGATGGGGTTGATCGGGAGCTGGGTTTGGCTAAGGGGTTGAGCTATTTTTGTACGAGTGGGCCTCAAAAGTTAGGGGTGATCCATGGTGTTTCAACGAGTGGGCCACAAGCATCTCATGTGTTTCAACGTTTCAATATCCCAAGGGTTGAGAGGGAGATTCTTTTTATTTTAATCCATCCTCAATATGAGTGAACCATTGGATTGTTCTATCATAATAAGTGTTATACCCCTCCAAAGAACAAAAGAAATAATAGATTCTCTCACTCTCTAGTTTTTTACTGTTTCGAAAAGGTGGGTGGAAATAAGCATAAGAAAGTATTGTATTACAAAGTAGTGAGCTTTGACCAGTCCCCAATGAACCCAGGTATTTTGCCGGTAAGTTCATTGTCCGATGCCCATCTGTCATGAGAAGAAGAAAAAGAAAACAGAAACCATTGTGATGCATAGTGGGTTCTAAAAATTTCTTAATCGATTATGTAAACACAAAGCTGGACAATTCTCTTACACTGTCCGCAAATTCGTTAGATTTGAAAATGTTGTGGGAATATCGCCTTGCACTCCAGAGCTATCAAAGTACCTTTAAGGTAAACATAGTCTAACCCATCATGAATGATCAGTGCAAGTAGATAATCACAACTAACAAGTTTAACACATCTTTAATGATTAATACAAAATGAGAGAATATTCAACGATCCTTTTACTCAACTCTATTATTGAAAAGATTATTATTATATCTTGTTTCATTCAACTATTTATACATTATTCTTTAGTTTCCCCTGTAATATATTTTTAATGGTTAGTAATTTCCTTTTATATCTTTTTAATATAGATGGTATGTTATGTGTATGTTTATTATTTATATTTATGATTTTTATTTCCTTATTGGAAGACCGTCTTTCTTTTATGCAAGAGGACCTTGTATTTTAAGATCTAATACAAGAGAATATGAAAAGAAATACATGAAGTTTATATTCTTCCAAAATTTGAGGTCGTACTTAGTCTGGTCTCTAGAAACCTTAGCCATTACCCAAGGCTTTAGCCACCGCTACTGTCGGAACTCTAGCTATTGTTAGAAATGGCACACTCTACCTCCGACAAGTCTCATCTGAAACAAGTGTGCCACAAGGCAAGTCAGTTCATTTGAGTTTGCAAGGTTTTCGTTGGCATTTGCTCGTTCCTTCGTAGTCGTCGTGAGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGTTGCAAATATTGCAGTGTCATCCTACATCACTAAGGGCTTTGACATACAAAGCTTCCAAAACCTTTTTATTTAATTTATAGTGGCCTTGGGAAAAGTTTATCAACTATATTTGTTTATCTTAGGTTTATTTAATGGAAAATTTTAGGTGAAATAAAGTTTTACAATGCGTTTGAAACTCGATCAAACCAAGGTTGTTAAGAGAACCTTGACAACTATTCTCAGGACTATTCTTGATAAGAATCTTAAGACTTGGGAAGATTGTTTGTCATTTACAAAATTTGCACATAATAAGGTTGTTTGTAGCACTACCAAATACACTCCCTTTGAAATAGTTTATGGTTTAAATTATTTAACCTCTATTGATTTGTTACCCTACATGTTGTGCAAAGGTGAGCTTCAAGATGGAGATGCACTAAATGTATTTTAACTTACCTTTCTTGAACTCATAGTTAAAATTAAGTTTAAACTATGGAACTTAGTTCATGTACGGTTACTAGACAATACATTTTTTTTTATTATATTATTTTAATTGTAATTTTTATTTATCATTTAAACTAATTTTTAAATGGGAGTTAAAGGTTGTCCGATAACTCAAATAAGTTACCATATTTCATGGTCATTCTAACATGGAGGTTATGAGTGTATTATGACTCACATAAGCTACCGTCCAAGATTAGCCTTAAGTTGGAGATATTTGTGTAACTCAGTGAGTTAGTATCCAAACGGCAAATGAATGATATCTATTATTCAAGGGAGTGCCAAAGGGTATTTTTGTGATCCTATTCAATTAGGAGAGTGTTAACTCCTTAAGCAATGTAATTCTCTAAAAAATTATATCAAAAAACAGTAGTCTAGTTTCTATTCTAATTTAGAAAATCTGATTCGAACCAAAATCCTAACTCAATTGATAAAGCTTCATTTCGAGCCTGCTTAGCTGCCGTTCAAGTTTCCTTTGAAGCCTTCATAGATGATCGTGACCAAATTTCATTAAGTCTGCATATTTGGAGTCCCACATTGCAGATAAAGAAGTAG

mRNA sequence

ATGATCTCCAACTCCTTCAAAGCTGCACTCCAATGTCTAGATGGAAGAACTAGACGGTACCTTAAGAAAGGCCGCTACGAAAAGCGCACTAGCGTAGATGCTCTGATCTACCTAGTTGTCGTCCCCAAATACCTTGCTTCTATGGTTTTGAAATTGGCCACCAATGTAACGCGTGATAACAAGAAAAATAAGATAAACTCTAGACATCCATTACCCAAGGCTTTAGCCACCGCTACTGTCGGAACTCTAGCTATTGTTAGAAATGGCACACTCTACCTCCGACAAGTCTCATCTGAAACAAGTGTGCCACAAGGCAAAAAATCTGATTCGAACCAAAATCCTAACTCAATTGATAAAGCTTCATTTCGAGCCTGCTTAGCTGCCGTTCAAGTTTCCTTTGAAGCCTTCATAGATGATCGTGACCAAATTTCATTAAGTCTGCATATTTGGAGTCCCACATTGCAGATAAAGAAGTAG

Coding sequence (CDS)

ATGATCTCCAACTCCTTCAAAGCTGCACTCCAATGTCTAGATGGAAGAACTAGACGGTACCTTAAGAAAGGCCGCTACGAAAAGCGCACTAGCGTAGATGCTCTGATCTACCTAGTTGTCGTCCCCAAATACCTTGCTTCTATGGTTTTGAAATTGGCCACCAATGTAACGCGTGATAACAAGAAAAATAAGATAAACTCTAGACATCCATTACCCAAGGCTTTAGCCACCGCTACTGTCGGAACTCTAGCTATTGTTAGAAATGGCACACTCTACCTCCGACAAGTCTCATCTGAAACAAGTGTGCCACAAGGCAAAAAATCTGATTCGAACCAAAATCCTAACTCAATTGATAAAGCTTCATTTCGAGCCTGCTTAGCTGCCGTTCAAGTTTCCTTTGAAGCCTTCATAGATGATCGTGACCAAATTTCATTAAGTCTGCATATTTGGAGTCCCACATTGCAGATAAAGAAGTAG

Protein sequence

MISNSFKAALQCLDGRTRRYLKKGRYEKRTSVDALIYLVVVPKYLASMVLKLATNVTRDNKKNKINSRHPLPKALATATVGTLAIVRNGTLYLRQVSSETSVPQGKKSDSNQNPNSIDKASFRACLAAVQVSFEAFIDDRDQISLSLHIWSPTLQIKK

Homology

[Close]

BLAST of Carg26074 vs. NCBI nr
Match: XP_015875055.1 (histone H2A.1 [Ziziphus jujuba])

HSP 1 Score: 82.4 bits (202), Expect = 1.5e-12
Identity = 56/131 (42.75%), Postives = 71/131 (54.20%), Query Frame = 0


Query: 2   ISNSFKAALQCLDGRTRRYLKKGRYEKRTSVDALIYLVVVPKYLASMVLKLATNVTRDNK 61
           +S S KA LQ   GR  R+LKKGRY +RT   A IYL  V +YLA+ VL+LA N  RDNK
Sbjct: 23  VSKSIKAGLQFPVGRIARFLKKGRYAQRTGTGAPIYLAAVLEYLAAEVLELAGNAARDNK 82

Query: 62  KNKINSRH---------PLPKALATATVGTLAIVRNGTLYLRQVSSETSVPQGKKSDSNQ 121
           KN+IN RH          L K L   T+ +  ++ N    L    S T+    K S + +
Sbjct: 83  KNRINPRHVLLAVRNDDELGKLLQGVTIASGGVLPNIHQVLLPKKSSTASESDKASQAKK 142

Query: 122 NPNSIDKASFR 124
           +P    KASFR
Sbjct: 143 SPK---KASFR 150

[Close]

BLAST of Carg26074 vs. NCBI nr
Match: XP_022150784.1 (probable histone H2A.5 [Momordica charantia])

HSP 1 Score: 81.6 bits (200), Expect = 2.6e-12
Identity = 56/123 (45.53%), Postives = 68/123 (55.28%), Query Frame = 0


Query: 2   ISNSFKAALQCLDGRTRRYLKKGRYEKRTSVDALIYLVVVPKYLASMVLKLATNVTRDNK 61
           +S S KA LQ   GR  RYLKKGRY KRT+  A IYL  V +YLA+ VL+LA N  RDNK
Sbjct: 18  VSKSVKAGLQFPVGRIGRYLKKGRYAKRTAAGAPIYLAAVLEYLAAEVLELAGNAARDNK 77

Query: 62  KNKINSRHPLPKALATATVGTL----AIVRNGTLYLRQVSSETSVPQGKKSDSNQNPNSI 121
           KN+IN RH L        +G L     I   G L      +   V   KK+ SN  P++ 
Sbjct: 78  KNRINPRHVLLAVRNDEELGKLLQGVTIASGGVL-----PNINPVLLPKKTSSNSTPSTA 135

[Close]

BLAST of Carg26074 vs. NCBI nr
Match: XP_008454292.1 (PREDICTED: probable histone H2A.5 [Cucumis melo])

HSP 1 Score: 79.3 bits (194), Expect = 1.3e-11
Identity = 51/120 (42.50%), Postives = 68/120 (56.67%), Query Frame = 0


Query: 2   ISNSFKAALQCLDGRTRRYLKKGRYEKRTSVDALIYLVVVPKYLASMVLKLATNVTRDNK 61
           +S S KA LQ   GR  RYLKKGRY KRT+  A IYL  V +YLA+ VL+LA N  RDNK
Sbjct: 18  VSKSVKAGLQFPVGRIGRYLKKGRYAKRTAAGAPIYLAAVLEYLAAEVLELAGNAARDNK 77

Query: 62  KNKINSRH---------PLPKALATATVGTLAIVRN-GTLYLRQVSSETSVPQGKKSDSN 112
           KN+IN RH          L K L   T+ +  ++ N   + L + ++  S P  +K+  +
Sbjct: 78  KNRINPRHVLLAVRNDEELGKLLQGVTIASGGVLPNINPVLLPKKTASNSTPTAEKAQKS 137

[Close]

BLAST of Carg26074 vs. NCBI nr
Match: XP_018845908.1 (PREDICTED: histone H2A.1-like [Juglans regia])

HSP 1 Score: 78.2 bits (191), Expect = 2.8e-11
Identity = 42/70 (60.00%), Postives = 48/70 (68.57%), Query Frame = 0


Query: 2  ISNSFKAALQCLDGRTRRYLKKGRYEKRTSVDALIYLVVVPKYLASMVLKLATNVTRDNK 61
          +S S KA LQ   GR  RYLKKGRY +RT   A IYL  V +YLA+ VL+LA N  RDNK
Sbjct: 23 VSKSIKAGLQFPVGRIARYLKKGRYAQRTGTGAPIYLAAVLEYLAAEVLELAGNAARDNK 82

Query: 62 KNKINSRHPL 72
          KN+IN RH L
Sbjct: 83 KNRINPRHVL 92

[Close]

BLAST of Carg26074 vs. NCBI nr
Match: XP_004144786.1 (PREDICTED: probable histone H2A.5 [Cucumis sativus] >KGN60951.1 hypothetical protein Csa_2G030610 [Cucumis sativus])

HSP 1 Score: 77.8 bits (190), Expect = 3.7e-11
Identity = 50/120 (41.67%), Postives = 68/120 (56.67%), Query Frame = 0


Query: 2   ISNSFKAALQCLDGRTRRYLKKGRYEKRTSVDALIYLVVVPKYLASMVLKLATNVTRDNK 61
           +S S KA LQ   GR  RYLKKGRY +RT+  A IYL  V +YLA+ VL+LA N  RDNK
Sbjct: 18  VSKSVKAGLQFPVGRIGRYLKKGRYAQRTAAGAPIYLAAVLEYLAAEVLELAGNAARDNK 77

Query: 62  KNKINSRH---------PLPKALATATVGTLAIVRN-GTLYLRQVSSETSVPQGKKSDSN 112
           KN+IN RH          L K L   T+ +  ++ N   + L + ++  S P  +K+  +
Sbjct: 78  KNRINPRHVLLAVRNDEELGKLLQGVTIASGGVLPNINPVLLPKKTASNSTPTAEKAQKS 137

[Close]

BLAST of Carg26074 vs. TAIR10
Match: AT5G27670.1 (histone H2A 7)

HSP 1 Score: 74.7 bits (182), Expect = 5.7e-14
Identity = 49/122 (40.16%), Postives = 65/122 (53.28%), Query Frame = 0


Query: 2   ISNSFKAALQCLDGRTRRYLKKGRYEKRTSVDALIYLVVVPKYLASMVLKLATNVTRDNK 61
           +S S KA LQ   GR  RYLKKGRY  R    A +YL  V +YLA+ VL+LA N  RDNK
Sbjct: 26  VSKSVKAGLQFPVGRIARYLKKGRYALRYGSGAPVYLAAVLEYLAAEVLELAGNAARDNK 85

Query: 62  KNKINSRH---------PLPKALATATVGTLAIVRNGTLYLRQVSSETSVPQGKKSDSNQ 115
           KN+IN RH          L + L   T+ +  ++ N    L    S  S  Q +K+ + +
Sbjct: 86  KNRINPRHLCLAIRNDEELGRLLHGVTIASGGVLPNINPVLLPKKSTASSSQAEKASATK 145

[Close]

BLAST of Carg26074 vs. TAIR10
Match: AT5G59870.1 (histone H2A 6)

HSP 1 Score: 65.5 bits (158), Expect = 3.4e-11
Identity = 45/118 (38.14%), Postives = 61/118 (51.69%), Query Frame = 0


Query: 2   ISNSFKAALQCLDGRTRRYLKKGRYEKRTSVDALIYLVVVPKYLASMVLKLATNVTRDNK 61
           +S S KA LQ   GR  R+LKKGRY +R    A +Y+  V +YLA+ VL+LA N  RDNK
Sbjct: 25  VSKSMKAGLQFPVGRITRFLKKGRYAQRLGGGAPVYMAAVLEYLAAEVLELAGNAARDNK 84

Query: 62  KNKINSRH---------PLPKALATATVGTLAIVRNGTLYLRQVSSETSVPQGKKSDS 111
           K++I  RH          L K L+  T+    ++ N    L    S T   + K + S
Sbjct: 85  KSRIIPRHLLLAIRNDEELGKLLSGVTIAHGGVLPNINSVLLPKKSATKPAEEKATKS 142

[Close]

BLAST of Carg26074 vs. TAIR10
Match: AT1G08880.1 (Histone superfamily protein)

HSP 1 Score: 63.9 bits (154), Expect = 1.0e-10
Identity = 39/96 (40.62%), Postives = 52/96 (54.17%), Query Frame = 0


Query: 2   ISNSFKAALQCLDGRTRRYLKKGRYEKRTSVDALIYLVVVPKYLASMVLKLATNVTRDNK 61
           +S S KA LQ   GR  R+LK G+Y +R    A +YL  V +YLA+ VL+LA N  RDNK
Sbjct: 23  VSRSSKAGLQFPVGRIARFLKSGKYAERVGAGAPVYLSAVLEYLAAEVLELAGNAARDNK 82

Query: 62  KNKINSRH---------PLPKALATATVGTLAIVRN 89
           K +I  RH          L K L + T+    ++ N
Sbjct: 83  KTRIVPRHIQLAVRNDEELSKLLGSVTIANGGVLPN 118

[Close]

BLAST of Carg26074 vs. TAIR10
Match: AT1G54690.1 (gamma histone variant H2AX)

HSP 1 Score: 63.5 bits (153), Expect = 1.3e-10
Identity = 39/96 (40.62%), Postives = 52/96 (54.17%), Query Frame = 0


Query: 2   ISNSFKAALQCLDGRTRRYLKKGRYEKRTSVDALIYLVVVPKYLASMVLKLATNVTRDNK 61
           +S S KA LQ   GR  R+LK G+Y +R    A +YL  V +YLA+ VL+LA N  RDNK
Sbjct: 23  VSRSSKAGLQFPVGRIARFLKAGKYAERVGAGAPVYLSAVLEYLAAEVLELAGNAARDNK 82

Query: 62  KNKINSRH---------PLPKALATATVGTLAIVRN 89
           K +I  RH          L K L + T+    ++ N
Sbjct: 83  KTRIVPRHIQLAVRNDEELSKLLGSVTIANGGVLPN 118

[Close]

BLAST of Carg26074 vs. TAIR10
Match: AT1G51060.1 (histone H2A 10)

HSP 1 Score: 63.2 bits (152), Expect = 1.7e-10
Identity = 39/95 (41.05%), Postives = 51/95 (53.68%), Query Frame = 0


Query: 3   SNSFKAALQCLDGRTRRYLKKGRYEKRTSVDALIYLVVVPKYLASMVLKLATNVTRDNKK 62
           + S KA LQ   GR  R+LKKG+Y +R    A +YL  V +YLA+ VL+LA N  RDNKK
Sbjct: 18  TRSSKAGLQFPVGRIARFLKKGKYAERVGAGAPVYLAAVLEYLAAEVLELAGNAARDNKK 77

Query: 63  NKINSRH---------PLPKALATATVGTLAIVRN 89
            +I  RH          L K L   T+    ++ N
Sbjct: 78  TRIVPRHIQLAVRNDEELSKLLGDVTIANGGVMPN 112

[Close]

BLAST of Carg26074 vs. Swiss-Prot
Match: sp|Q94F49|H2A5_ARATH (Probable histone H2A.5 OS=Arabidopsis thaliana OX=3702 GN=At5g27670 PE=1 SV=1)

HSP 1 Score: 74.7 bits (182), Expect = 1.0e-12
Identity = 49/122 (40.16%), Postives = 65/122 (53.28%), Query Frame = 0


Query: 2   ISNSFKAALQCLDGRTRRYLKKGRYEKRTSVDALIYLVVVPKYLASMVLKLATNVTRDNK 61
           +S S KA LQ   GR  RYLKKGRY  R    A +YL  V +YLA+ VL+LA N  RDNK
Sbjct: 26  VSKSVKAGLQFPVGRIARYLKKGRYALRYGSGAPVYLAAVLEYLAAEVLELAGNAARDNK 85

Query: 62  KNKINSRH---------PLPKALATATVGTLAIVRNGTLYLRQVSSETSVPQGKKSDSNQ 115
           KN+IN RH          L + L   T+ +  ++ N    L    S  S  Q +K+ + +
Sbjct: 86  KNRINPRHLCLAIRNDEELGRLLHGVTIASGGVLPNINPVLLPKKSTASSSQAEKASATK 145

[Close]

BLAST of Carg26074 vs. Swiss-Prot
Match: sp|Q9LZ46|H2A4_ARATH (Probable histone H2A.4 OS=Arabidopsis thaliana OX=3702 GN=At5g02560 PE=1 SV=1)

HSP 1 Score: 73.9 bits (180), Expect = 1.7e-12
Identity = 42/82 (51.22%), Postives = 50/82 (60.98%), Query Frame = 0


Query: 2   ISNSFKAALQCLDGRTRRYLKKGRYEKRTSVDALIYLVVVPKYLASMVLKLATNVTRDNK 61
           +S S K+ LQ   GR  RYLKKGRY KR    A +YL  V +YLA+ VL+LA N  RDNK
Sbjct: 25  VSRSVKSGLQFPVGRIGRYLKKGRYSKRVGTGAPVYLAAVLEYLAAEVLELAGNAARDNK 84

Query: 62  KNKINSRHPLPKALATATVGTL 84
           KN+I  RH L        +GTL
Sbjct: 85  KNRIIPRHVLLAVRNDEELGTL 106

[Close]

BLAST of Carg26074 vs. Swiss-Prot
Match: sp|A2WQG7|H2A5_ORYSI (Probable histone H2A.5 OS=Oryza sativa subsp. indica OX=39946 GN=OsI_002060 PE=3 SV=1)

HSP 1 Score: 72.8 bits (177), Expect = 3.9e-12
Identity = 49/119 (41.18%), Postives = 66/119 (55.46%), Query Frame = 0


Query: 2   ISNSFKAALQCLDGRTRRYLKKGRYEKRTSVDALIYLVVVPKYLASMVLKLATNVTRDNK 61
           +S S KA LQ   GR  RYLKKGRY +R    A +YL  V +YLA+ VL+LA N  RDNK
Sbjct: 29  VSRSVKAGLQFPVGRIGRYLKKGRYAQRIGTGAPVYLAAVLEYLAAEVLELAGNAARDNK 88

Query: 62  KNKINSRH---------PLPKALATATVGTLAIVRN-GTLYLRQVSSETSVPQGKKSDS 111
           KN+I  RH          L K LA  T+    ++ N   + L + ++E +   GK++ S
Sbjct: 89  KNRIIPRHVLLAIRNDEELGKLLAGVTIAHGGVLPNINPVLLPKKTAEKAAAAGKEAKS 147

[Close]

BLAST of Carg26074 vs. Swiss-Prot
Match: sp|Q94E96|H2A5_ORYSJ (Probable histone H2A.5 OS=Oryza sativa subsp. japonica OX=39947 GN=Os01g0502700 PE=2 SV=1)

HSP 1 Score: 72.8 bits (177), Expect = 3.9e-12
Identity = 49/119 (41.18%), Postives = 66/119 (55.46%), Query Frame = 0


Query: 2   ISNSFKAALQCLDGRTRRYLKKGRYEKRTSVDALIYLVVVPKYLASMVLKLATNVTRDNK 61
           +S S KA LQ   GR  RYLKKGRY +R    A +YL  V +YLA+ VL+LA N  RDNK
Sbjct: 29  VSRSVKAGLQFPVGRIGRYLKKGRYAQRIGTGAPVYLAAVLEYLAAEVLELAGNAARDNK 88

Query: 62  KNKINSRH---------PLPKALATATVGTLAIVRN-GTLYLRQVSSETSVPQGKKSDS 111
           KN+I  RH          L K LA  T+    ++ N   + L + ++E +   GK++ S
Sbjct: 89  KNRIIPRHVLLAIRNDEELGKLLAGVTIAHGGVLPNINPVLLPKKTAEKAAAAGKEAKS 147

[Close]

BLAST of Carg26074 vs. Swiss-Prot
Match: sp|A2XZN0|H2A6_ORYSI (Probable histone H2A.6 OS=Oryza sativa subsp. indica OX=39946 GN=OsI_017523 PE=3 SV=2)

HSP 1 Score: 71.6 bits (174), Expect = 8.6e-12
Identity = 39/70 (55.71%), Postives = 46/70 (65.71%), Query Frame = 0


Query: 2  ISNSFKAALQCLDGRTRRYLKKGRYEKRTSVDALIYLVVVPKYLASMVLKLATNVTRDNK 61
          +S S KA LQ   GR  RYLKKGRY +R    A +YL  V +YLA+ VL+LA N  RDNK
Sbjct: 26 VSRSVKAGLQFPVGRIGRYLKKGRYAQRVGTGAPVYLAAVLEYLAAEVLELAGNAARDNK 85

Query: 62 KNKINSRHPL 72
          KN+I  RH L
Sbjct: 86 KNRIIPRHVL 95

[Close]

BLAST of Carg26074 vs. TrEMBL
Match: tr|A0A1S3BZ15|A0A1S3BZ15_CUCME (Histone H2A OS=Cucumis melo OX=3656 GN=LOC103494731 PE=3 SV=1)

HSP 1 Score: 79.3 bits (194), Expect = 8.4e-12
Identity = 51/120 (42.50%), Postives = 68/120 (56.67%), Query Frame = 0


Query: 2   ISNSFKAALQCLDGRTRRYLKKGRYEKRTSVDALIYLVVVPKYLASMVLKLATNVTRDNK 61
           +S S KA LQ   GR  RYLKKGRY KRT+  A IYL  V +YLA+ VL+LA N  RDNK
Sbjct: 18  VSKSVKAGLQFPVGRIGRYLKKGRYAKRTAAGAPIYLAAVLEYLAAEVLELAGNAARDNK 77

Query: 62  KNKINSRH---------PLPKALATATVGTLAIVRN-GTLYLRQVSSETSVPQGKKSDSN 112
           KN+IN RH          L K L   T+ +  ++ N   + L + ++  S P  +K+  +
Sbjct: 78  KNRINPRHVLLAVRNDEELGKLLQGVTIASGGVLPNINPVLLPKKTASNSTPTAEKAQKS 137

[Close]

BLAST of Carg26074 vs. TrEMBL
Match: tr|A0A2I4GPT2|A0A2I4GPT2_9ROSI (Histone H2A OS=Juglans regia OX=51240 GN=LOC109009751 PE=3 SV=1)

HSP 1 Score: 78.2 bits (191), Expect = 1.9e-11
Identity = 42/70 (60.00%), Postives = 48/70 (68.57%), Query Frame = 0


Query: 2  ISNSFKAALQCLDGRTRRYLKKGRYEKRTSVDALIYLVVVPKYLASMVLKLATNVTRDNK 61
          +S S KA LQ   GR  RYLKKGRY +RT   A IYL  V +YLA+ VL+LA N  RDNK
Sbjct: 23 VSKSIKAGLQFPVGRIARYLKKGRYAQRTGTGAPIYLAAVLEYLAAEVLELAGNAARDNK 82

Query: 62 KNKINSRHPL 72
          KN+IN RH L
Sbjct: 83 KNRINPRHVL 92

[Close]

BLAST of Carg26074 vs. TrEMBL
Match: tr|A0A0A0LLV9|A0A0A0LLV9_CUCSA (Histone H2A OS=Cucumis sativus OX=3659 GN=Csa_2G030610 PE=3 SV=1)

HSP 1 Score: 77.8 bits (190), Expect = 2.4e-11
Identity = 50/120 (41.67%), Postives = 68/120 (56.67%), Query Frame = 0


Query: 2   ISNSFKAALQCLDGRTRRYLKKGRYEKRTSVDALIYLVVVPKYLASMVLKLATNVTRDNK 61
           +S S KA LQ   GR  RYLKKGRY +RT+  A IYL  V +YLA+ VL+LA N  RDNK
Sbjct: 18  VSKSVKAGLQFPVGRIGRYLKKGRYAQRTAAGAPIYLAAVLEYLAAEVLELAGNAARDNK 77

Query: 62  KNKINSRH---------PLPKALATATVGTLAIVRN-GTLYLRQVSSETSVPQGKKSDSN 112
           KN+IN RH          L K L   T+ +  ++ N   + L + ++  S P  +K+  +
Sbjct: 78  KNRINPRHVLLAVRNDEELGKLLQGVTIASGGVLPNINPVLLPKKTASNSTPTAEKAQKS 137

[Close]

BLAST of Carg26074 vs. TrEMBL
Match: tr|W9RPN4|W9RPN4_9ROSA (Histone H2A OS=Morus notabilis OX=981085 GN=L484_002853 PE=3 SV=1)

HSP 1 Score: 77.4 bits (189), Expect = 3.2e-11
Identity = 50/116 (43.10%), Postives = 65/116 (56.03%), Query Frame = 0


Query: 2   ISNSFKAALQCLDGRTRRYLKKGRYEKRTSVDALIYLVVVPKYLASMVLKLATNVTRDNK 61
           +S S KA LQ   GR  RYLKKGRY +RT   A IYL  V +YLA+ VL+LA N  RDNK
Sbjct: 20  VSKSVKAGLQFPVGRIVRYLKKGRYAQRTGTGAPIYLSAVLEYLAAEVLELAGNAARDNK 79

Query: 62  KNKINSRH---------PLPKALATATVGTLAIVRNGTLYLRQVSSETSVPQGKKS 109
           KN+IN RH          L K L + T+ +  ++ N    L    S ++   G+K+
Sbjct: 80  KNRINPRHVLLAVRNDDELGKLLQSVTISSGGVLPNINPVLLPKKSHSASADGEKA 135

[Close]

BLAST of Carg26074 vs. TrEMBL
Match: tr|A0A2I4HFN0|A0A2I4HFN0_9ROSI (Histone H2A OS=Juglans regia OX=51240 GN=LOC109017111 PE=3 SV=1)

HSP 1 Score: 77.4 bits (189), Expect = 3.2e-11
Identity = 42/70 (60.00%), Postives = 48/70 (68.57%), Query Frame = 0


Query: 2  ISNSFKAALQCLDGRTRRYLKKGRYEKRTSVDALIYLVVVPKYLASMVLKLATNVTRDNK 61
          +S S KA LQ   GR  RYLKKGRY +RT   A IYL  V +YLA+ VL+LA N  RDNK
Sbjct: 22 VSKSMKAGLQFPVGRIARYLKKGRYAQRTGSGAPIYLAAVLEYLAAEVLELAGNAARDNK 81

Query: 62 KNKINSRHPL 72
          KN+IN RH L
Sbjct: 82 KNRINPRHVL 91

The following BLAST results are available for this feature:

BLAST of Carg26074 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_015875055.1	1.5e-12	42.75	histone H2A.1 [Ziziphus jujuba]	[more]
XP_022150784.1	2.6e-12	45.53	probable histone H2A.5 [Momordica charantia]	[more]
XP_008454292.1	1.3e-11	42.50	PREDICTED: probable histone H2A.5 [Cucumis melo]	[more]
XP_018845908.1	2.8e-11	60.00	PREDICTED: histone H2A.1-like [Juglans regia]	[more]
XP_004144786.1	3.7e-11	41.67	PREDICTED: probable histone H2A.5 [Cucumis sativus] >KGN60951.1 hypothetical pro...	[more]

BLAST of Carg26074 vs. TAIR10


Match Name	E-value	Identity	Description
AT5G27670.1	5.7e-14	40.16	histone H2A 7	[more]
AT5G59870.1	3.4e-11	38.14	histone H2A 6	[more]
AT1G08880.1	1.0e-10	40.63	Histone superfamily protein	[more]
AT1G54690.1	1.3e-10	40.63	gamma histone variant H2AX	[more]
AT1G51060.1	1.7e-10	41.05	histone H2A 10	[more]

BLAST of Carg26074 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|Q94F49\|H2A5_ARATH	1.0e-12	40.16	Probable histone H2A.5 OS=Arabidopsis thaliana OX=3702 GN=At5g27670 PE=1 SV=1	[more]
sp\|Q9LZ46\|H2A4_ARATH	1.7e-12	51.22	Probable histone H2A.4 OS=Arabidopsis thaliana OX=3702 GN=At5g02560 PE=1 SV=1	[more]
sp\|A2WQG7\|H2A5_ORYSI	3.9e-12	41.18	Probable histone H2A.5 OS=Oryza sativa subsp. indica OX=39946 GN=OsI_002060 PE=3...	[more]
sp\|Q94E96\|H2A5_ORYSJ	3.9e-12	41.18	Probable histone H2A.5 OS=Oryza sativa subsp. japonica OX=39947 GN=Os01g0502700 ...	[more]
sp\|A2XZN0\|H2A6_ORYSI	8.6e-12	55.71	Probable histone H2A.6 OS=Oryza sativa subsp. indica OX=39946 GN=OsI_017523 PE=3...	[more]

BLAST of Carg26074 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A1S3BZ15\|A0A1S3BZ15_CUCME	8.4e-12	42.50	Histone H2A OS=Cucumis melo OX=3656 GN=LOC103494731 PE=3 SV=1	[more]
tr\|A0A2I4GPT2\|A0A2I4GPT2_9ROSI	1.9e-11	60.00	Histone H2A OS=Juglans regia OX=51240 GN=LOC109009751 PE=3 SV=1	[more]
tr\|A0A0A0LLV9\|A0A0A0LLV9_CUCSA	2.4e-11	41.67	Histone H2A OS=Cucumis sativus OX=3659 GN=Csa_2G030610 PE=3 SV=1	[more]
tr\|W9RPN4\|W9RPN4_9ROSA	3.2e-11	43.10	Histone H2A OS=Morus notabilis OX=981085 GN=L484_002853 PE=3 SV=1	[more]
tr\|A0A2I4HFN0\|A0A2I4HFN0_9ROSI	3.2e-11	60.00	Histone H2A OS=Juglans regia OX=51240 GN=LOC109017111 PE=3 SV=1	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Molecular Function**
Term	Definition
GO:0046982	protein heterodimerization activity
GO:0003677	DNA binding

Vocabulary: **Cellular Component**
Term	Definition
GO:0005634	nucleus
GO:0000786	nucleosome

Vocabulary: **INTERPRO**
Term	Definition
IPR009072	Histone-fold
IPR002119	Histone_H2A

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0000786	nucleosome
cellular_component	GO:0005634	nucleus
molecular_function	GO:0003677	DNA binding
molecular_function	GO:0046982	protein heterodimerization activity

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg26074-RA	Carg26074-RA	mRNA

InterPro

Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002119	Histone H2A	PRINTS	PR00620	HISTONEH2A	coord: 58..72 score: 49.9 coord: 29..44 score: 35.3 coord: 44..57 score: 47.89
IPR009072	Histone-fold	GENE3D	G3DSA:1.10.20.10		coord: 1..94 e-value: 8.8E-16 score: 60.0
IPR009072	Histone-fold	SUPERFAMILY	SSF47113	Histone-fold	coord: 3..69
None	No IPR available	PANTHER	PTHR23430:SF208	SUBFAMILY NOT NAMED	coord: 2..71
None	No IPR available	PANTHER	PTHR23430	HISTONE H2A	coord: 2..71

Synteny

The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Carg26074	Cucumber (Gy14) v2	carcgybB0329
Carg26074	Cucumber (Gy14) v1	carcgyB0375
Carg26074	Cucurbita maxima (Rimu)	carcmaB0446
Carg26074	Cucurbita maxima (Rimu)	carcmaB0447
Carg26074	Cucurbita moschata (Rifu)	carcmoB0438
Carg26074	Cucurbita pepo (Zucchini)	carcpeB0442
Carg26074	Cucurbita pepo (Zucchini)	carcpeB0444
Carg26074	Wild cucumber (PI 183967)	carcpiB0351
Carg26074	Cucumber (Chinese Long) v2	carcuB0345
Carg26074	Cucumber (Chinese Long) v3	carcucB0350
Carg26074	Bottle gourd (USVL1VR-Ls)	carlsiB292
Carg26074	Melon (DHL92) v3.5.1	carmeB0323
Carg26074	Melon (DHL92) v3.6.1	carmedB0332
Carg26074	Watermelon (Charleston Gray)	carwcgB0311
Carg26074	Watermelon (97103) v1	carwmB0309
Carg26074	Watermelon (97103) v2	carwmbB0327
Carg26074	Wax gourd	carwgoB0403