Carg26042 (gene) Silver-seed gourd | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Carg26042
Type	gene
Organism	Cucurbita argyrosperma (Silver-seed gourd)
Description	Heavy metal-associated isoprenylated plant protein
Location	Cucurbita_argyrosperma_scaffold_258 : 38201 .. 38702 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGTGAAGATGGACTGTGATGGGTGTGAAAGGAGAATTAAAAATGCTGTTTCCTCCATCAAAGGTCTCCCCTTTCTACTCTTTGATTTATACGTGTTCTTACCTAATTGAGTTATGTTAAGCAATACTAAAAAGACACGAACGACGACTTAATTACAATGTATTACGACTCCTTTTCCCCTTGTTTGTTTGATATTTCACTGATTCCTGATAAGGAGTGAAGTCAGTGGAGGTGAACAGGAAGCAAAGCAAGGTAACAGTGATTGGATATGCTGAACCAAGCAAGGTTCTAAAAAGGGTTCAAAGCACAGGAAAGAAGGCTGAGTTTTGGCCTTATGTCCCCTACAACTTGGTGGCTTATCCTTATGTTGCTCAGGCTTACGACAAGAAGGCGCCTGCCGGGTACGTAAAGAACGCCACTCAAGCGCTCTCGGTTGCGGAGGCACCCGACGAGAGGTTGATAATGATGTTCAGCGATGAAAATCCTCATGCTTGTTCTATT

mRNA sequence

ATGGTGAAGATGGACTGTGATGGGTGTGAAAGGAGAATTAAAAATGCTGTTTCCTCCATCAAAGGAGTGAAGTCAGTGGAGGTGAACAGGAAGCAAAGCAAGGTAACAGTGATTGGATATGCTGAACCAAGCAAGGTTCTAAAAAGGGTTCAAAGCACAGGAAAGAAGGCTGAGTTTTGGCCTTATGTCCCCTACAACTTGGTGGCTTATCCTTATGTTGCTCAGGCTTACGACAAGAAGGCGCCTGCCGGGTACGTAAAGAACGCCACTCAAGCGCTCTCGGTTGCGGAGGCACCCGACGAGAGGTTGATAATGATGTTCAGCGATGAAAATCCTCATGCTTGTTCTATT

Coding sequence (CDS)

ATGGTGAAGATGGACTGTGATGGGTGTGAAAGGAGAATTAAAAATGCTGTTTCCTCCATCAAAGGAGTGAAGTCAGTGGAGGTGAACAGGAAGCAAAGCAAGGTAACAGTGATTGGATATGCTGAACCAAGCAAGGTTCTAAAAAGGGTTCAAAGCACAGGAAAGAAGGCTGAGTTTTGGCCTTATGTCCCCTACAACTTGGTGGCTTATCCTTATGTTGCTCAGGCTTACGACAAGAAGGCGCCTGCCGGGTACGTAAAGAACGCCACTCAAGCGCTCTCGGTTGCGGAGGCACCCGACGAGAGGTTGATAATGATGTTCAGCGATGAAAATCCTCATGCTTGTTCTATT

Protein sequence

MVKMDCDGCERRIKNAVSSIKGVKSVEVNRKQSKVTVIGYAEPSKVLKRVQSTGKKAEFWPYVPYNLVAYPYVAQAYDKKAPAGYVKNATQALSVAEAPDERLIMMFSDENPHACSI

Homology

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BLAST of Carg26042 vs. NCBI nr
Match: XP_022989989.1 (heavy metal-associated isoprenylated plant protein 20-like [Cucurbita maxima])

HSP 1 Score: 233.8 bits (595), Expect = 3.0e-58
Identity = 116/117 (99.15%), Postives = 116/117 (99.15%), Query Frame = 0


Query: 1   MVKMDCDGCERRIKNAVSSIKGVKSVEVNRKQSKVTVIGYAEPSKVLKRVQSTGKKAEFW 60
           MVKMDCDGCERRIKNA SSIKGVKSVEVNRKQSKVTVIGYAEPSKVLKRVQSTGKKAEFW
Sbjct: 32  MVKMDCDGCERRIKNAASSIKGVKSVEVNRKQSKVTVIGYAEPSKVLKRVQSTGKKAEFW 91

Query: 61  PYVPYNLVAYPYVAQAYDKKAPAGYVKNATQALSVAEAPDERLIMMFSDENPHACSI 118
           PYVPYNLVAYPYVAQAYDKKAPAGYVKNATQALSVAEAPDERLIMMFSDENPHACSI
Sbjct: 92  PYVPYNLVAYPYVAQAYDKKAPAGYVKNATQALSVAEAPDERLIMMFSDENPHACSI 148

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BLAST of Carg26042 vs. NCBI nr
Match: XP_023520934.1 (heavy metal-associated isoprenylated plant protein 20-like isoform X1 [Cucurbita pepo subsp. pepo] >XP_023520935.1 heavy metal-associated isoprenylated plant protein 20-like isoform X2 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 233.8 bits (595), Expect = 3.0e-58
Identity = 116/117 (99.15%), Postives = 116/117 (99.15%), Query Frame = 0


Query: 1   MVKMDCDGCERRIKNAVSSIKGVKSVEVNRKQSKVTVIGYAEPSKVLKRVQSTGKKAEFW 60
           MVKMDCDGCERRIKNAVSSIKGVKSVEVNRKQSKVTVIGYAEPSKVLKRVQSTGKKAEFW
Sbjct: 32  MVKMDCDGCERRIKNAVSSIKGVKSVEVNRKQSKVTVIGYAEPSKVLKRVQSTGKKAEFW 91

Query: 61  PYVPYNLVAYPYVAQAYDKKAPAGYVKNATQALSVAEAPDERLIMMFSDENPHACSI 118
           PYVPYNLVAYPYVAQAYDKKAPAGYVKNATQ LSVAEAPDERLIMMFSDENPHACSI
Sbjct: 92  PYVPYNLVAYPYVAQAYDKKAPAGYVKNATQVLSVAEAPDERLIMMFSDENPHACSI 148

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BLAST of Carg26042 vs. NCBI nr
Match: XP_022963087.1 (heavy metal-associated isoprenylated plant protein 20-like [Cucurbita moschata])

HSP 1 Score: 233.4 bits (594), Expect = 3.9e-58
Identity = 116/117 (99.15%), Postives = 116/117 (99.15%), Query Frame = 0


Query: 1   MVKMDCDGCERRIKNAVSSIKGVKSVEVNRKQSKVTVIGYAEPSKVLKRVQSTGKKAEFW 60
           MVKMDCDGCERRIKNAVSSIKGVKSVEVNRKQSKVTVIGYAEPSKVLKRVQSTGKKAEFW
Sbjct: 32  MVKMDCDGCERRIKNAVSSIKGVKSVEVNRKQSKVTVIGYAEPSKVLKRVQSTGKKAEFW 91

Query: 61  PYVPYNLVAYPYVAQAYDKKAPAGYVKNATQALSVAEAPDERLIMMFSDENPHACSI 118
           PYVPYNLVAYPYVAQAYDKKAPAGYVKNATQALS AEAPDERLIMMFSDENPHACSI
Sbjct: 92  PYVPYNLVAYPYVAQAYDKKAPAGYVKNATQALSFAEAPDERLIMMFSDENPHACSI 148

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BLAST of Carg26042 vs. NCBI nr
Match: XP_022152320.1 (heavy metal-associated isoprenylated plant protein 20-like [Momordica charantia])

HSP 1 Score: 210.3 bits (534), Expect = 3.5e-51
Identity = 99/116 (85.34%), Postives = 111/116 (95.69%), Query Frame = 0


Query: 2   VKMDCDGCERRIKNAVSSIKGVKSVEVNRKQSKVTVIGYAEPSKVLKRVQSTGKKAEFWP 61
           VKMDCDGCER++KNAVSSIKGVKSVEV+RKQSKVT +GYAEP+KVLK+VQSTGK+AEFWP
Sbjct: 29  VKMDCDGCERKVKNAVSSIKGVKSVEVDRKQSKVTAVGYAEPNKVLKKVQSTGKRAEFWP 88

Query: 62  YVPYNLVAYPYVAQAYDKKAPAGYVKNATQALSVAEAPDERLIMMFSDENPHACSI 118
           YVPYNLVAYPYVAQAYDKKAPAGYVKNA QA  +A+APDERL +MFSDENP+ACS+
Sbjct: 89  YVPYNLVAYPYVAQAYDKKAPAGYVKNAAQAFPLAQAPDERLTVMFSDENPNACSV 144

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BLAST of Carg26042 vs. NCBI nr
Match: XP_022993216.1 (heavy metal-associated isoprenylated plant protein 22-like [Cucurbita maxima])

HSP 1 Score: 209.1 bits (531), Expect = 7.9e-51
Identity = 101/116 (87.07%), Postives = 108/116 (93.10%), Query Frame = 0


Query: 2   VKMDCDGCERRIKNAVSSIKGVKSVEVNRKQSKVTVIGYAEPSKVLKRVQSTGKKAEFWP 61
           VKMDCDGCERRIKNAVSS+KGVKSVEVNRKQSKVT +GYAEPSKVLK+VQSTGKKAE WP
Sbjct: 33  VKMDCDGCERRIKNAVSSVKGVKSVEVNRKQSKVTAVGYAEPSKVLKKVQSTGKKAELWP 92

Query: 62  YVPYNLVAYPYVAQAYDKKAPAGYVKNATQALSVAEAPDERLIMMFSDENPHACSI 118
           YVPY++VAYPYVAQAYDKKAP GYVKNA QA  V EAPD+RL MMFSDENP+ACSI
Sbjct: 93  YVPYSVVAYPYVAQAYDKKAPPGYVKNAVQAFPVDEAPDQRLTMMFSDENPNACSI 148

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BLAST of Carg26042 vs. TAIR10
Match: AT1G71050.1 (Heavy metal transport/detoxification superfamily protein )

HSP 1 Score: 169.1 bits (427), Expect = 1.6e-42
Identity = 81/118 (68.64%), Postives = 95/118 (80.51%), Query Frame = 0


Query: 2   VKMDCDGCERRIKNAVSSIKGVKSVEVNRKQSKVTVIGYAEPSKVLKRVQSTGKKAEFWP 61
           VKMDCDGCERR+KNAVSS+KGVKSVEVNRK  KVTV GY EP KVLKR++ TGKKAE WP
Sbjct: 34  VKMDCDGCERRVKNAVSSMKGVKSVEVNRKIHKVTVSGYVEPKKVLKRIERTGKKAEIWP 93

Query: 62  YVPYNLVAYPYVAQAYDKKAPAGYVKNA--TQALSVAEAPDERLIMMFSDENPHACSI 118
           YVPYN+VAYPY    YDKKAPAGYV+ +  +Q   +  AP+   I +FSDENP+AC++
Sbjct: 94  YVPYNMVAYPYAVGTYDKKAPAGYVRKSEQSQLQLLPGAPENHYISLFSDENPNACTV 151

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BLAST of Carg26042 vs. TAIR10
Match: AT1G22990.1 (Heavy metal transport/detoxification superfamily protein )

HSP 1 Score: 164.9 bits (416), Expect = 3.1e-41
Identity = 79/117 (67.52%), Postives = 96/117 (82.05%), Query Frame = 0


Query: 2   VKMDCDGCERRIKNAVSSIKGVKSVEVNRKQSKVTVIGYAEPSKVLKRVQSTG-KKAEFW 61
           VK+DCDGCER+IKNAVSSIKG KSVEVNRK  KVTV GY +P KVLK VQSTG KKAE W
Sbjct: 35  VKIDCDGCERKIKNAVSSIKGAKSVEVNRKMHKVTVSGYVDPKKVLKTVQSTGKKKAELW 94

Query: 62  PYVPYNLVAYPYVAQAYDKKAPAGYVKNATQALSVAEAPDERLIMMFSDENPHACSI 118
           PYVPY +VAYPY A AYDK+AP G+V+ + QA +   + D++L+ +FSDENP+AC++
Sbjct: 95  PYVPYTMVAYPYAAGAYDKRAPPGFVRKSEQAQAQPGSTDDKLMSLFSDENPNACTV 151

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BLAST of Carg26042 vs. TAIR10
Match: AT5G17450.1 (Heavy metal transport/detoxification superfamily protein )

HSP 1 Score: 162.5 bits (410), Expect = 1.5e-40
Identity = 74/117 (63.25%), Postives = 96/117 (82.05%), Query Frame = 0


Query: 2   VKMDCDGCERRIKNAVSSIKGVKSVEVNRKQSKVTVIGYAEPSKVLKRVQSTGKKAEFWP 61
           VKMDCDGCERR++N V  +KGVKSVEVNRKQS++TV G+ +P+KVLKRV+STGKKAEFWP
Sbjct: 32  VKMDCDGCERRVRNVVRRMKGVKSVEVNRKQSRITVNGHVDPNKVLKRVKSTGKKAEFWP 91

Query: 62  YVPYNLVAYPYVAQAYDKKAPAGYVKNATQALSVAEAPDERLIMMFSDENPH-ACSI 118
           Y+P ++V YP+    YDK+APAG+++N TQ+   A AP+E  + +FSD+N H ACSI
Sbjct: 92  YIPQHMVYYPFAPGMYDKRAPAGHIRNPTQSFPTANAPEENYVSLFSDDNVHAACSI 148

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BLAST of Carg26042 vs. TAIR10
Match: AT4G39700.1 (Heavy metal transport/detoxification superfamily protein )

HSP 1 Score: 155.6 bits (392), Expect = 1.9e-38
Identity = 75/120 (62.50%), Postives = 92/120 (76.67%), Query Frame = 0


Query: 2   VKMDCDGCERRIKNAVSSIKGVKSVEVNRKQSKVTVIGYAEPSKVLKRVQSTGKKAEFWP 61
           V+MDCDGC  +IKN++SS+KGVK+VE+N+KQ KVTV GYA+ SKVLK+ ++TGKKAE WP
Sbjct: 38  VRMDCDGCVLKIKNSLSSLKGVKTVEINKKQQKVTVSGYADASKVLKKAKATGKKAEIWP 97

Query: 62  YVPYNLVAYPYVAQAYDKKAPAGYVK----NATQALSVAEAPDERLIMMFSDENPHACSI 118
           YVPYNLVA PY+AQAYDKKAP GYV+    N T         D     +FSD+NP+ACSI
Sbjct: 98  YVPYNLVAQPYIAQAYDKKAPPGYVRKVDPNVTTGTMAVYYDDPSYTSLFSDDNPNACSI 157

[Close]

BLAST of Carg26042 vs. TAIR10
Match: AT4G08570.1 (Heavy metal transport/detoxification superfamily protein )

HSP 1 Score: 136.0 bits (341), Expect = 1.5e-32
Identity = 64/118 (54.24%), Postives = 86/118 (72.88%), Query Frame = 0


Query: 1   MVKMDCDGCERRIKNAVSSIKGVKSVEVNRKQSKVTVIGYAEPSKVLKRVQSTGKKAEFW 60
           + ++DC+GCER+IK+ +S +KGVKSV+V+ K  KVTV GY +P KVL+  +ST KK E W
Sbjct: 32  VARIDCEGCERKIKHVLSGVKGVKSVDVDVKLQKVTVTGYIDPKKVLEAAKSTKKKVELW 91

Query: 61  PYVPYNLVAYPYVAQAYDKKAPAGYVKNATQALSVAEAP-DERLIMMFSDENPHACSI 118
           PYVPY +VA PY++QAYDKKAP   V+      SV E   D+   +MFSDENP++C+I
Sbjct: 92  PYVPYTMVANPYISQAYDKKAPPNMVRKVPDTASVNETTVDDSYTIMFSDENPNSCAI 149

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BLAST of Carg26042 vs. Swiss-Prot
Match: sp|Q9C9A3|HIP20_ARATH (Heavy metal-associated isoprenylated plant protein 20 OS=Arabidopsis thaliana OX=3702 GN=HIPP20 PE=1 SV=1)

HSP 1 Score: 169.1 bits (427), Expect = 2.9e-41
Identity = 81/118 (68.64%), Postives = 95/118 (80.51%), Query Frame = 0


Query: 2   VKMDCDGCERRIKNAVSSIKGVKSVEVNRKQSKVTVIGYAEPSKVLKRVQSTGKKAEFWP 61
           VKMDCDGCERR+KNAVSS+KGVKSVEVNRK  KVTV GY EP KVLKR++ TGKKAE WP
Sbjct: 34  VKMDCDGCERRVKNAVSSMKGVKSVEVNRKIHKVTVSGYVEPKKVLKRIERTGKKAEIWP 93

Query: 62  YVPYNLVAYPYVAQAYDKKAPAGYVKNA--TQALSVAEAPDERLIMMFSDENPHACSI 118
           YVPYN+VAYPY    YDKKAPAGYV+ +  +Q   +  AP+   I +FSDENP+AC++
Sbjct: 94  YVPYNMVAYPYAVGTYDKKAPAGYVRKSEQSQLQLLPGAPENHYISLFSDENPNACTV 151

[Close]

BLAST of Carg26042 vs. Swiss-Prot
Match: sp|Q93VP2|HIP22_ARATH (Heavy metal-associated isoprenylated plant protein 22 OS=Arabidopsis thaliana OX=3702 GN=HIPP22 PE=1 SV=1)

HSP 1 Score: 164.9 bits (416), Expect = 5.6e-40
Identity = 79/117 (67.52%), Postives = 96/117 (82.05%), Query Frame = 0


Query: 2   VKMDCDGCERRIKNAVSSIKGVKSVEVNRKQSKVTVIGYAEPSKVLKRVQSTG-KKAEFW 61
           VK+DCDGCER+IKNAVSSIKG KSVEVNRK  KVTV GY +P KVLK VQSTG KKAE W
Sbjct: 35  VKIDCDGCERKIKNAVSSIKGAKSVEVNRKMHKVTVSGYVDPKKVLKTVQSTGKKKAELW 94

Query: 62  PYVPYNLVAYPYVAQAYDKKAPAGYVKNATQALSVAEAPDERLIMMFSDENPHACSI 118
           PYVPY +VAYPY A AYDK+AP G+V+ + QA +   + D++L+ +FSDENP+AC++
Sbjct: 95  PYVPYTMVAYPYAAGAYDKRAPPGFVRKSEQAQAQPGSTDDKLMSLFSDENPNACTV 151

[Close]

BLAST of Carg26042 vs. Swiss-Prot
Match: sp|Q9LF57|HIP21_ARATH (Heavy metal-associated isoprenylated plant protein 21 OS=Arabidopsis thaliana OX=3702 GN=HIPP21 PE=1 SV=1)

HSP 1 Score: 162.5 bits (410), Expect = 2.8e-39
Identity = 74/117 (63.25%), Postives = 96/117 (82.05%), Query Frame = 0


Query: 2   VKMDCDGCERRIKNAVSSIKGVKSVEVNRKQSKVTVIGYAEPSKVLKRVQSTGKKAEFWP 61
           VKMDCDGCERR++N V  +KGVKSVEVNRKQS++TV G+ +P+KVLKRV+STGKKAEFWP
Sbjct: 32  VKMDCDGCERRVRNVVRRMKGVKSVEVNRKQSRITVNGHVDPNKVLKRVKSTGKKAEFWP 91

Query: 62  YVPYNLVAYPYVAQAYDKKAPAGYVKNATQALSVAEAPDERLIMMFSDENPH-ACSI 118
           Y+P ++V YP+    YDK+APAG+++N TQ+   A AP+E  + +FSD+N H ACSI
Sbjct: 92  YIPQHMVYYPFAPGMYDKRAPAGHIRNPTQSFPTANAPEENYVSLFSDDNVHAACSI 148

[Close]

BLAST of Carg26042 vs. Swiss-Prot
Match: sp|O65657|HIP23_ARATH (Heavy metal-associated isoprenylated plant protein 23 OS=Arabidopsis thaliana OX=3702 GN=HIPP23 PE=1 SV=1)

HSP 1 Score: 155.6 bits (392), Expect = 3.4e-37
Identity = 75/120 (62.50%), Postives = 92/120 (76.67%), Query Frame = 0


Query: 2   VKMDCDGCERRIKNAVSSIKGVKSVEVNRKQSKVTVIGYAEPSKVLKRVQSTGKKAEFWP 61
           V+MDCDGC  +IKN++SS+KGVK+VE+N+KQ KVTV GYA+ SKVLK+ ++TGKKAE WP
Sbjct: 38  VRMDCDGCVLKIKNSLSSLKGVKTVEINKKQQKVTVSGYADASKVLKKAKATGKKAEIWP 97

Query: 62  YVPYNLVAYPYVAQAYDKKAPAGYVK----NATQALSVAEAPDERLIMMFSDENPHACSI 118
           YVPYNLVA PY+AQAYDKKAP GYV+    N T         D     +FSD+NP+ACSI
Sbjct: 98  YVPYNLVAQPYIAQAYDKKAPPGYVRKVDPNVTTGTMAVYYDDPSYTSLFSDDNPNACSI 157

[Close]

BLAST of Carg26042 vs. Swiss-Prot
Match: sp|O81464|HIP24_ARATH (Heavy metal-associated isoprenylated plant protein 24 OS=Arabidopsis thaliana OX=3702 GN=HIPP24 PE=1 SV=1)

HSP 1 Score: 136.0 bits (341), Expect = 2.8e-31
Identity = 64/118 (54.24%), Postives = 86/118 (72.88%), Query Frame = 0


Query: 1   MVKMDCDGCERRIKNAVSSIKGVKSVEVNRKQSKVTVIGYAEPSKVLKRVQSTGKKAEFW 60
           + ++DC+GCER+IK+ +S +KGVKSV+V+ K  KVTV GY +P KVL+  +ST KK E W
Sbjct: 32  VARIDCEGCERKIKHVLSGVKGVKSVDVDVKLQKVTVTGYIDPKKVLEAAKSTKKKVELW 91

Query: 61  PYVPYNLVAYPYVAQAYDKKAPAGYVKNATQALSVAEAP-DERLIMMFSDENPHACSI 118
           PYVPY +VA PY++QAYDKKAP   V+      SV E   D+   +MFSDENP++C+I
Sbjct: 92  PYVPYTMVANPYISQAYDKKAPPNMVRKVPDTASVNETTVDDSYTIMFSDENPNSCAI 149

[Close]

BLAST of Carg26042 vs. TrEMBL
Match: tr|A0A067L0K9|A0A067L0K9_JATCU (Uncharacterized protein OS=Jatropha curcas OX=180498 GN=JCGZ_04678 PE=4 SV=1)

HSP 1 Score: 197.6 bits (501), Expect = 1.6e-47
Identity = 94/116 (81.03%), Postives = 104/116 (89.66%), Query Frame = 0


Query: 2   VKMDCDGCERRIKNAVSSIKGVKSVEVNRKQSKVTVIGYAEPSKVLKRVQSTGKKAEFWP 61
           VKMDCDGCERR++N+VS +KGVKSVEVNRKQS+VTV GY EPSKVLK+V+STGK+AEFWP
Sbjct: 34  VKMDCDGCERRVRNSVSHMKGVKSVEVNRKQSRVTVSGYVEPSKVLKKVKSTGKRAEFWP 93

Query: 62  YVPYNLVAYPYVAQAYDKKAPAGYVKNATQALSVAEAPDERLIMMFSDENPHACSI 118
           YVPYNLVAYPYVAQAYDKKAP+GYVKN  QAL    A DERL  +FSDENPHACSI
Sbjct: 94  YVPYNLVAYPYVAQAYDKKAPSGYVKNVVQALPSPNATDERLTSLFSDENPHACSI 149

[Close]

BLAST of Carg26042 vs. TrEMBL
Match: tr|A0A1R3IZV5|A0A1R3IZV5_9ROSI (Uncharacterized protein OS=Corchorus olitorius OX=93759 GN=COLO4_20461 PE=4 SV=1)

HSP 1 Score: 197.2 bits (500), Expect = 2.0e-47
Identity = 92/116 (79.31%), Postives = 105/116 (90.52%), Query Frame = 0


Query: 2   VKMDCDGCERRIKNAVSSIKGVKSVEVNRKQSKVTVIGYAEPSKVLKRVQSTGKKAEFWP 61
           VKMDCDGCERR+KNAVSS+KG KSV+VNRKQSKVTV GY EP+KVLK+V+STGK+AEFWP
Sbjct: 8   VKMDCDGCERRVKNAVSSMKGAKSVDVNRKQSKVTVTGYVEPNKVLKKVKSTGKRAEFWP 67

Query: 62  YVPYNLVAYPYVAQAYDKKAPAGYVKNATQALSVAEAPDERLIMMFSDENPHACSI 118
           YVPYNLVAYPYVAQAYDKKAP+GYVKNA QAL    A DE+ + +FSDENP+ACS+
Sbjct: 68  YVPYNLVAYPYVAQAYDKKAPSGYVKNAVQALPTPNAVDEKFVTLFSDENPNACSV 123

[Close]

BLAST of Carg26042 vs. TrEMBL
Match: tr|A0A2P5FK73|A0A2P5FK73_9ROSA (Heavy metal-associated domain containing protein OS=Trema orientalis OX=63057 GN=TorRG33x02_060250 PE=4 SV=1)

HSP 1 Score: 196.8 bits (499), Expect = 2.7e-47
Identity = 93/116 (80.17%), Postives = 103/116 (88.79%), Query Frame = 0


Query: 2   VKMDCDGCERRIKNAVSSIKGVKSVEVNRKQSKVTVIGYAEPSKVLKRVQSTGKKAEFWP 61
           VKMDCDGCERR+KNAVSS+KG K VEVNRKQS+VTV GY EP+KVLK+V+STGK+AEFWP
Sbjct: 30  VKMDCDGCERRVKNAVSSMKGAKQVEVNRKQSRVTVTGYVEPNKVLKKVKSTGKRAEFWP 89

Query: 62  YVPYNLVAYPYVAQAYDKKAPAGYVKNATQALSVAEAPDERLIMMFSDENPHACSI 118
           YVPYNLVAYPYVAQAYDKKAP+GYVKN  QAL    APDE+   MFSDENP+ACSI
Sbjct: 90  YVPYNLVAYPYVAQAYDKKAPSGYVKNVVQALPSPNAPDEKFTTMFSDENPNACSI 145

[Close]

BLAST of Carg26042 vs. TrEMBL
Match: tr|A0A2I4E609|A0A2I4E609_9ROSI (heavy metal-associated isoprenylated plant protein 20-like OS=Juglans regia OX=51240 GN=LOC108986619 PE=4 SV=1)

HSP 1 Score: 196.8 bits (499), Expect = 2.7e-47
Identity = 91/116 (78.45%), Postives = 104/116 (89.66%), Query Frame = 0


Query: 2   VKMDCDGCERRIKNAVSSIKGVKSVEVNRKQSKVTVIGYAEPSKVLKRVQSTGKKAEFWP 61
           VKMDCDGCERR+KNAVS++KGVK V+VNRKQS+VTV GY EP+K+L +V+STGK+AEFWP
Sbjct: 30  VKMDCDGCERRVKNAVSNLKGVKQVDVNRKQSRVTVTGYVEPNKILNKVKSTGKRAEFWP 89

Query: 62  YVPYNLVAYPYVAQAYDKKAPAGYVKNATQALSVAEAPDERLIMMFSDENPHACSI 118
           YVPYNLVAYPYVAQAYDKKAP+GYVKN  QAL    APDE+ I +FSDENPHACSI
Sbjct: 90  YVPYNLVAYPYVAQAYDKKAPSGYVKNVFQALPSPNAPDEKFISLFSDENPHACSI 145

[Close]

BLAST of Carg26042 vs. TrEMBL
Match: tr|B9SYJ6|B9SYJ6_RICCO (Metal ion binding protein, putative OS=Ricinus communis OX=3988 GN=RCOM_1288720 PE=4 SV=1)

HSP 1 Score: 196.8 bits (499), Expect = 2.7e-47
Identity = 94/116 (81.03%), Postives = 104/116 (89.66%), Query Frame = 0


Query: 2   VKMDCDGCERRIKNAVSSIKGVKSVEVNRKQSKVTVIGYAEPSKVLKRVQSTGKKAEFWP 61
           VKMDCDGCERR+K+AVS+IKGVKSVEVNRKQS+V V GY EP+KVLK+V+STGK+AEFWP
Sbjct: 34  VKMDCDGCERRVKHAVSNIKGVKSVEVNRKQSRVVVSGYIEPNKVLKKVRSTGKRAEFWP 93

Query: 62  YVPYNLVAYPYVAQAYDKKAPAGYVKNATQALSVAEAPDERLIMMFSDENPHACSI 118
           YVPYNLVAYPYVAQAYDKKAP+GYVKN  QAL    APDE+   MFSDENPHACSI
Sbjct: 94  YVPYNLVAYPYVAQAYDKKAPSGYVKNVFQALPSPNAPDEKYTTMFSDENPHACSI 149

The following BLAST results are available for this feature:

BLAST of Carg26042 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022989989.1	3.0e-58	99.15	heavy metal-associated isoprenylated plant protein 20-like [Cucurbita maxima]	[more]
XP_023520934.1	3.0e-58	99.15	heavy metal-associated isoprenylated plant protein 20-like isoform X1 [Cucurbita...	[more]
XP_022963087.1	3.9e-58	99.15	heavy metal-associated isoprenylated plant protein 20-like [Cucurbita moschata]	[more]
XP_022152320.1	3.5e-51	85.34	heavy metal-associated isoprenylated plant protein 20-like [Momordica charantia]	[more]
XP_022993216.1	7.9e-51	87.07	heavy metal-associated isoprenylated plant protein 22-like [Cucurbita maxima]	[more]

BLAST of Carg26042 vs. TAIR10


Match Name	E-value	Identity	Description
AT1G71050.1	1.6e-42	68.64	Heavy metal transport/detoxification superfamily protein	[more]
AT1G22990.1	3.1e-41	67.52	Heavy metal transport/detoxification superfamily protein	[more]
AT5G17450.1	1.5e-40	63.25	Heavy metal transport/detoxification superfamily protein	[more]
AT4G39700.1	1.9e-38	62.50	Heavy metal transport/detoxification superfamily protein	[more]
AT4G08570.1	1.5e-32	54.24	Heavy metal transport/detoxification superfamily protein	[more]

BLAST of Carg26042 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|Q9C9A3\|HIP20_ARATH	2.9e-41	68.64	Heavy metal-associated isoprenylated plant protein 20 OS=Arabidopsis thaliana OX...	[more]
sp\|Q93VP2\|HIP22_ARATH	5.6e-40	67.52	Heavy metal-associated isoprenylated plant protein 22 OS=Arabidopsis thaliana OX...	[more]
sp\|Q9LF57\|HIP21_ARATH	2.8e-39	63.25	Heavy metal-associated isoprenylated plant protein 21 OS=Arabidopsis thaliana OX...	[more]
sp\|O65657\|HIP23_ARATH	3.4e-37	62.50	Heavy metal-associated isoprenylated plant protein 23 OS=Arabidopsis thaliana OX...	[more]
sp\|O81464\|HIP24_ARATH	2.8e-31	54.24	Heavy metal-associated isoprenylated plant protein 24 OS=Arabidopsis thaliana OX...	[more]

BLAST of Carg26042 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A067L0K9\|A0A067L0K9_JATCU	1.6e-47	81.03	Uncharacterized protein OS=Jatropha curcas OX=180498 GN=JCGZ_04678 PE=4 SV=1	[more]
tr\|A0A1R3IZV5\|A0A1R3IZV5_9ROSI	2.0e-47	79.31	Uncharacterized protein OS=Corchorus olitorius OX=93759 GN=COLO4_20461 PE=4 SV=1	[more]
tr\|A0A2P5FK73\|A0A2P5FK73_9ROSA	2.7e-47	80.17	Heavy metal-associated domain containing protein OS=Trema orientalis OX=63057 GN...	[more]
tr\|A0A2I4E609\|A0A2I4E609_9ROSI	2.7e-47	78.45	heavy metal-associated isoprenylated plant protein 20-like OS=Juglans regia OX=5...	[more]
tr\|B9SYJ6\|B9SYJ6_RICCO	2.7e-47	81.03	Metal ion binding protein, putative OS=Ricinus communis OX=3988 GN=RCOM_1288720 ...	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Biological Process**
Term	Definition
GO:0030001	metal ion transport

Vocabulary: **Molecular Function**
Term	Definition
GO:0046872	metal ion binding

Vocabulary: **INTERPRO**
Term	Definition
IPR036163	HMA_dom_sf
IPR006121	HMA_dom

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0030001	metal ion transport
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0046872	metal ion binding

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg26042-RA	Carg26042-RA	mRNA

InterPro

Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR006121	Heavy metal-associated domain, HMA	PFAM	PF00403	HMA	coord: 2..56 e-value: 2.9E-15 score: 56.4
IPR006121	Heavy metal-associated domain, HMA	PROSITE	PS50846	HMA_2	coord: 1..59 score: 12.955
IPR006121	Heavy metal-associated domain, HMA	CDD	cd00371	HMA	coord: 4..58 e-value: 2.87328E-14 score: 62.2381
None	No IPR available	GENE3D	G3DSA:3.30.70.100		coord: 1..61 e-value: 3.5E-17 score: 64.6
None	No IPR available	PANTHER	PTHR22814	COPPER TRANSPORT PROTEIN ATOX1-RELATED	coord: 2..116
None	No IPR available	PANTHER	PTHR22814:SF47	HEAVY METAL-ASSOCIATED ISOPRENYLATED PLANT PROTEIN 21	coord: 2..116
IPR036163	Heavy metal-associated domain superfamily	SUPERFAMILY	SSF55008	HMA, heavy metal-associated domain	coord: 2..61

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Carg26042	Cla003915	Watermelon (97103) v1	carwmB0423
Carg26042	Csa5G571510	Cucumber (Chinese Long) v2	carcuB0461
Carg26042	MELO3C005315	Melon (DHL92) v3.5.1	carmeB0436
Carg26042	ClCG01G006120	Watermelon (Charleston Gray)	carwcgB0419
Carg26042	CSPI05G19710	Wild cucumber (PI 183967)	carcpiB0465
Carg26042	Cucsa.280480	Cucumber (Gy14) v1	carcgyB0495
Carg26042	CmaCh15G009470	Cucurbita maxima (Rimu)	carcmaB0593
Carg26042	CmaCh04G020940	Cucurbita maxima (Rimu)	carcmaB0595
Carg26042	CmoCh15G009860	Cucurbita moschata (Rifu)	carcmoB0578
Carg26042	CmoCh04G021970	Cucurbita moschata (Rifu)	carcmoB0580
Carg26042	Lsi09G006480	Bottle gourd (USVL1VR-Ls)	carlsiB387
Carg26042	CsGy5G019210	Cucumber (Gy14) v2	carcgybB0437
Carg26042	MELO3C005315.2	Melon (DHL92) v3.6.1	carmedB0438
Carg26042	CsaV3_5G028540	Cucumber (Chinese Long) v3	carcucB0461
Carg26042	Cla97C01G006420	Watermelon (97103) v2	carwmbB0450
Carg26042	Bhi12G000769	Wax gourd	carwgoB0512

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
Carg26042	Carg26353	Silver-seed gourd	carcarB229

The following block(s) are covering this gene:

None