Carg26012 (gene) Silver-seed gourd

Overview
NameCarg26012
Typegene
OrganismCucurbita argyrosperma (Silver-seed gourd)
Descriptionselenium-binding protein 1
LocationCucurbita_argyrosperma_scaffold_296 : 225 .. 1663 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGTGGAACTATTTTGGATGCTTGTTCTGAATTGTTGTTTGAAAACAGGGACTGGGAGAAACAAGCCTGACTATCTGGCTACGGTGGATGTTGATCCTAATTCTCCTAATTACTCGAAAGTAATCCATCGATTACCTGCACCGTATCTTGGGGATGAATTGCATCATTCTGGGTGGAACTCTTGTAGCTCTTGTCATGGAGATCCTTCTGCAGATCGCCGCTATTTGATCCTTCCGTCGCTTGTGTAAGATATCGAAGTTTTCTTTTGAACTTTAAAACGGTTTCTCCTTTTCTTTACAGACAATTTCTAAATTTTTTGAGACTGTCAAGTGTTTTTAACGAACAAGGAGATTCTAAACTGCTTTGTCGCGTGAGTGCATGTGAACTCAATTCTGTTTTTCTCATCAAACTTCCAAGTTCACGAGTGATTCTTGGATTGGCCTGGTCTGGAATATACTAGGAATTAGAAATTAAAGCGAGTGAAGAATCCAATTCTACTCTTCAACAACAGTTTAAATGTATTAGCATTTGTCTAGATGATTTAATTTTCAACGAAGAAATACATGATTATAATATCCAAAACAATCCTTAAACGGATGTTCAGTAACGGGGAAGTTCATGATTTCAAAGATTGGCATCAAGTGTTTGTGTAAACTCATTGTTGGTTCTGTTCACTTGCAGATCGGGTCGCATATATGTGATTGACACGAAATCAAATCCCAGCGCTCCATCTTTGCACAAGGTTGTTGAACCTGAAGACATCATACAGAAAACTGGATTAGCTTTCCCTCACACGTCTCACTGCCTTGCTTCTGGTGATATAATGGTGTCATGTTTGGGAGACAAAGATGGAAACGCAGCAGGAAGTGGGTTCCTTCTTCTCGATTCAGAATTTAATGTTAAGGGAAGGTACTTGATATTTTGCTTATCCACAAAGAAATAGCTCTTTTTTGTTGAATCCTTTTTGTGGCTTGATTGATAAATTGATGAGCCAATGATTTTCTTTCTTCTGTGTTTCACAATATGGTTAATCTACATGTTAATTTGTAAGTGCGGATAATGAAGATTTTAGGCATTGATGAATTCGAGGATTTCATGCGACATATTTGATATTGGATCCACTTTGCCATTGCACTTTGGTTCAGTTTGCATAGCGTTTCTTGATCAATTTTTGCTTCACCAATTATAAACCAGGTGGGAAAAACCAGGGAATAGTCCCCTATTTGGATATGACTTTTGGTACCAACCACGGCACAAGACAATGGTTAGCTCATCATGGGGTGCTCCCTCTGCTTTCACAAAAGGTTTCAACCTTCAACATGTTGCCGATGGTCTGTACGGGAAGCATCTTCATGTGTATAGTTGGCCCGATGGTGAGCTGAAACAAACATTGGATCTTGGAGACACTGGCCTTATACCCTTGGAAGTGAGTTTGTAA

mRNA sequence

ATGGTGGAACTATTTTGGATGCTTGTTCTGAATTGTTGTTTGAAAACAGGGACTGGGAGAAACAAGCCTGACTATCTGGCTACGGTGGATGTTGATCCTAATTCTCCTAATTACTCGAAAGTAATCCATCGATTACCTGCACCGTATCTTGGGGATGAATTGCATCATTCTGGGTGGAACTCTTGTAGCTCTTGTCATGGAGATCCTTCTGCAGATCGCCGCTATTTGATCCTTCCGTCGCTTGTATCGGGTCGCATATATGTGATTGACACGAAATCAAATCCCAGCGCTCCATCTTTGCACAAGGTTGTTGAACCTGAAGACATCATACAGAAAACTGGATTAGCTTTCCCTCACACGTCTCACTGCCTTGCTTCTGGTGATATAATGGTGTCATGTTTGGGAGACAAAGATGGAAACGCAGCAGGAAGTGGGTGGGAAAAACCAGGGAATAGTCCCCTATTTGGATATGACTTTTGGTACCAACCACGGCACAAGACAATGGTTAGCTCATCATGGGGTGCTCCCTCTGCTTTCACAAAAGGTTTCAACCTTCAACATGTTGCCGATGGTCTGTACGGGAAGCATCTTCATGTGTATAGTTGGCCCGATGGTGAGCTGAAACAAACATTGGATCTTGGAGACACTGGCCTTATACCCTTGGAAGTGAGTTTGTAA

Coding sequence (CDS)

ATGGTGGAACTATTTTGGATGCTTGTTCTGAATTGTTGTTTGAAAACAGGGACTGGGAGAAACAAGCCTGACTATCTGGCTACGGTGGATGTTGATCCTAATTCTCCTAATTACTCGAAAGTAATCCATCGATTACCTGCACCGTATCTTGGGGATGAATTGCATCATTCTGGGTGGAACTCTTGTAGCTCTTGTCATGGAGATCCTTCTGCAGATCGCCGCTATTTGATCCTTCCGTCGCTTGTATCGGGTCGCATATATGTGATTGACACGAAATCAAATCCCAGCGCTCCATCTTTGCACAAGGTTGTTGAACCTGAAGACATCATACAGAAAACTGGATTAGCTTTCCCTCACACGTCTCACTGCCTTGCTTCTGGTGATATAATGGTGTCATGTTTGGGAGACAAAGATGGAAACGCAGCAGGAAGTGGGTGGGAAAAACCAGGGAATAGTCCCCTATTTGGATATGACTTTTGGTACCAACCACGGCACAAGACAATGGTTAGCTCATCATGGGGTGCTCCCTCTGCTTTCACAAAAGGTTTCAACCTTCAACATGTTGCCGATGGTCTGTACGGGAAGCATCTTCATGTGTATAGTTGGCCCGATGGTGAGCTGAAACAAACATTGGATCTTGGAGACACTGGCCTTATACCCTTGGAAGTGAGTTTGTAA

Protein sequence

MVELFWMLVLNCCLKTGTGRNKPDYLATVDVDPNSPNYSKVIHRLPAPYLGDELHHSGWNSCSSCHGDPSADRRYLILPSLVSGRIYVIDTKSNPSAPSLHKVVEPEDIIQKTGLAFPHTSHCLASGDIMVSCLGDKDGNAAGSGWEKPGNSPLFGYDFWYQPRHKTMVSSSWGAPSAFTKGFNLQHVADGLYGKHLHVYSWPDGELKQTLDLGDTGLIPLEVSL
Homology
[Close]
BLAST of Carg26012 vs. NCBI nr
Match: XP_023006568.1 (selenium-binding protein 1-like [Cucurbita maxima])

HSP 1 Score: 442.6 bits (1137), Expect = 8.1e-121
Identity = 208/228 (91.23%), Postives = 210/228 (92.11%), Query Frame = 0 

Query: 8   LVLNCCLKTGTGRNKPDYLATVDVDPNSPNYSKVIHRLPAPYLGDELHHSGWNSCSSCHG 67
           L+    + TGTGRNKPDYLATVDVDPNSPNYSKVIHRLPAPYLGDELHHSGWNSCSSCHG
Sbjct: 34  LIYVTAVYTGTGRNKPDYLATVDVDPNSPNYSKVIHRLPAPYLGDELHHSGWNSCSSCHG 93

Query: 68  DPSADRRYLILPSLVSGRIYVIDTKSNPSAPSLHKVVEPEDIIQKTGLAFPHTSHCLASG 127
           DPSADRRYLILPSLVSGRIYVIDTKSNPSAPSLHKVVEPEDIIQKTGLAFPHTSHCLASG
Sbjct: 94  DPSADRRYLILPSLVSGRIYVIDTKSNPSAPSLHKVVEPEDIIQKTGLAFPHTSHCLASG 153

Query: 128 DIMVSCLGDKDGNAAGSG-------------WEKPGNSPLFGYDFWYQPRHKTMVSSSWG 187
           DIMVSCLGDKDGNAAGSG             WEKPGNSPLFGYDFWYQPRHKTMVSSSWG
Sbjct: 154 DIMVSCLGDKDGNAAGSGFLLLDSEFNVKGRWEKPGNSPLFGYDFWYQPRHKTMVSSSWG 213

Query: 188 APSAFTKGFNLQHVADGLYGKHLHVYSWPDGELKQTLDLGDTGLIPLE 223
           APSAFTKGFNLQHVADGLYGKHLHVYSWPDGELKQTLDLGDTGLIPLE
Sbjct: 214 APSAFTKGFNLQHVADGLYGKHLHVYSWPDGELKQTLDLGDTGLIPLE 261

[Close]
BLAST of Carg26012 vs. NCBI nr
Match: XP_023548464.1 (selenium-binding protein 2-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 439.9 bits (1130), Expect = 5.3e-120
Identity = 206/228 (90.35%), Postives = 209/228 (91.67%), Query Frame = 0 

Query: 8   LVLNCCLKTGTGRNKPDYLATVDVDPNSPNYSKVIHRLPAPYLGDELHHSGWNSCSSCHG 67
           L+    + TGTGRNKPDYLATVDVDPNSPNYSKVIHRLP PYLGDELHHSGWNSCSSCHG
Sbjct: 34  LIYVTAVYTGTGRNKPDYLATVDVDPNSPNYSKVIHRLPVPYLGDELHHSGWNSCSSCHG 93

Query: 68  DPSADRRYLILPSLVSGRIYVIDTKSNPSAPSLHKVVEPEDIIQKTGLAFPHTSHCLASG 127
           DP+ADRRYLILPSLVSGRIYVIDTKSNPSAPSLHKVVEPEDIIQKTGLAFPHTSHCLASG
Sbjct: 94  DPTADRRYLILPSLVSGRIYVIDTKSNPSAPSLHKVVEPEDIIQKTGLAFPHTSHCLASG 153

Query: 128 DIMVSCLGDKDGNAAGSG-------------WEKPGNSPLFGYDFWYQPRHKTMVSSSWG 187
           DIMVSCLGDKDGNAAGSG             WEKPGNSPLFGYDFWYQPRHKTMVSSSWG
Sbjct: 154 DIMVSCLGDKDGNAAGSGFLLLDSEFNVKGRWEKPGNSPLFGYDFWYQPRHKTMVSSSWG 213

Query: 188 APSAFTKGFNLQHVADGLYGKHLHVYSWPDGELKQTLDLGDTGLIPLE 223
           APSAFTKGFNLQHVADGLYGKHLHVYSWPDGELKQTLDLGDTGLIPLE
Sbjct: 214 APSAFTKGFNLQHVADGLYGKHLHVYSWPDGELKQTLDLGDTGLIPLE 261

[Close]
BLAST of Carg26012 vs. NCBI nr
Match: XP_022958900.1 (selenium-binding protein 1-like [Cucurbita moschata])

HSP 1 Score: 438.3 bits (1126), Expect = 1.5e-119
Identity = 205/228 (89.91%), Postives = 208/228 (91.23%), Query Frame = 0 

Query: 8   LVLNCCLKTGTGRNKPDYLATVDVDPNSPNYSKVIHRLPAPYLGDELHHSGWNSCSSCHG 67
           L+    + TGTGRNKPDYLATVDVDPNSPNYSKVIHRLP PYLGDELHHSGWNSCSSCHG
Sbjct: 34  LIYVTAVYTGTGRNKPDYLATVDVDPNSPNYSKVIHRLPVPYLGDELHHSGWNSCSSCHG 93

Query: 68  DPSADRRYLILPSLVSGRIYVIDTKSNPSAPSLHKVVEPEDIIQKTGLAFPHTSHCLASG 127
           DP+ADRRYLILPSLVSGRIYVIDTKSNPS PSLHKVVEPEDIIQKTGLAFPHTSHCLASG
Sbjct: 94  DPTADRRYLILPSLVSGRIYVIDTKSNPSVPSLHKVVEPEDIIQKTGLAFPHTSHCLASG 153

Query: 128 DIMVSCLGDKDGNAAGSG-------------WEKPGNSPLFGYDFWYQPRHKTMVSSSWG 187
           DIMVSCLGDKDGNAAGSG             WEKPGNSPLFGYDFWYQPRHKTMVSSSWG
Sbjct: 154 DIMVSCLGDKDGNAAGSGFLLLDSEFNVKGRWEKPGNSPLFGYDFWYQPRHKTMVSSSWG 213

Query: 188 APSAFTKGFNLQHVADGLYGKHLHVYSWPDGELKQTLDLGDTGLIPLE 223
           APSAFTKGFNLQHVADGLYGKHLHVYSWPDGELKQTLDLGDTGLIPLE
Sbjct: 214 APSAFTKGFNLQHVADGLYGKHLHVYSWPDGELKQTLDLGDTGLIPLE 261

[Close]
BLAST of Carg26012 vs. NCBI nr
Match: XP_022147175.1 (selenium-binding protein 1-like [Momordica charantia])

HSP 1 Score: 426.0 bits (1094), Expect = 7.9e-116
Identity = 195/229 (85.15%), Postives = 208/229 (90.83%), Query Frame = 0 

Query: 8   LVLNCCLKTGTGRNKPDYLATVDVDPNSPNYSKVIHRLPAPYLGDELHHSGWNSCSSCHG 67
           L+    + +GTGRNKPDYLATVDVDPNSPNYSKVIHRLP PY+GDELHHSGWN+CSSCHG
Sbjct: 34  LIYVTAVYSGTGRNKPDYLATVDVDPNSPNYSKVIHRLPVPYIGDELHHSGWNACSSCHG 93

Query: 68  DPSADRRYLILPSLVSGRIYVIDTKSNPSAPSLHKVVEPEDIIQKTGLAFPHTSHCLASG 127
           DPSADRR+LILP+LVSGRIYVIDTK NP+APSLHKVVEPEDIIQKTGLAFPHTSHCLASG
Sbjct: 94  DPSADRRFLILPALVSGRIYVIDTKMNPTAPSLHKVVEPEDIIQKTGLAFPHTSHCLASG 153

Query: 128 DIMVSCLGDKDGNAAGSG-------------WEKPGNSPLFGYDFWYQPRHKTMVSSSWG 187
           DIMVSCLGDKDGNAAG+G             WEKPG+SPLFGYDFWYQPRHKTM+S+SWG
Sbjct: 154 DIMVSCLGDKDGNAAGNGFLLLDSEFKVKGRWEKPGHSPLFGYDFWYQPRHKTMISTSWG 213

Query: 188 APSAFTKGFNLQHVADGLYGKHLHVYSWPDGELKQTLDLGDTGLIPLEV 224
           APSAFTKGFNLQHVADGLYGKHLHVYSWPDGELKQ LDLGDTGLIPLE+
Sbjct: 214 APSAFTKGFNLQHVADGLYGKHLHVYSWPDGELKQMLDLGDTGLIPLEI 262

[Close]
BLAST of Carg26012 vs. NCBI nr
Match: XP_008458148.1 (PREDICTED: selenium-binding protein 2 [Cucumis melo])

HSP 1 Score: 424.1 bits (1089), Expect = 3.0e-115
Identity = 195/228 (85.53%), Postives = 206/228 (90.35%), Query Frame = 0 

Query: 8   LVLNCCLKTGTGRNKPDYLATVDVDPNSPNYSKVIHRLPAPYLGDELHHSGWNSCSSCHG 67
           L+    + +GTGRNKPDYLATVDVDPNSPNYSKVIHRL  PYLGDELHHSGWNSCSSCHG
Sbjct: 34  LIYVTAVYSGTGRNKPDYLATVDVDPNSPNYSKVIHRLSLPYLGDELHHSGWNSCSSCHG 93

Query: 68  DPSADRRYLILPSLVSGRIYVIDTKSNPSAPSLHKVVEPEDIIQKTGLAFPHTSHCLASG 127
           DPSADRR+LILPSL+SGRIYVIDTK+NP+APSLHKVVEPEDIIQKTGL FPHTSHCLASG
Sbjct: 94  DPSADRRFLILPSLLSGRIYVIDTKTNPTAPSLHKVVEPEDIIQKTGLGFPHTSHCLASG 153

Query: 128 DIMVSCLGDKDGNAAGSG-------------WEKPGNSPLFGYDFWYQPRHKTMVSSSWG 187
           DIMVSCLGDKDGNA G+G             WEKPGNSPLFGYDFWYQPRHKTM+SSSWG
Sbjct: 154 DIMVSCLGDKDGNAQGNGFLLLDSEFNVKGRWEKPGNSPLFGYDFWYQPRHKTMISSSWG 213

Query: 188 APSAFTKGFNLQHVADGLYGKHLHVYSWPDGELKQTLDLGDTGLIPLE 223
           APSAFTKGFNLQHVADGLYG+HLHVYSWPDGELKQTLDLGDTGL+PLE
Sbjct: 214 APSAFTKGFNLQHVADGLYGRHLHVYSWPDGELKQTLDLGDTGLLPLE 261

[Close]
BLAST of Carg26012 vs. TAIR10
Match: AT4G14040.1 (selenium-binding protein 2)

HSP 1 Score: 375.2 bits (962), Expect = 2.9e-104
Identity = 164/229 (71.62%), Postives = 195/229 (85.15%), Query Frame = 0 

Query: 8   LVLNCCLKTGTGRNKPDYLATVDVDPNSPNYSKVIHRLPAPYLGDELHHSGWNSCSSCHG 67
           L+    L +GTGR+KPDYLATVDVDP+SP +S VIHRL  PY+GDELHH+GWNSCSSCHG
Sbjct: 40  LIYVTALYSGTGRDKPDYLATVDVDPSSPTFSSVIHRLKMPYIGDELHHTGWNSCSSCHG 99

Query: 68  DPSADRRYLILPSLVSGRIYVIDTKSNPSAPSLHKVVEPEDIIQKTGLAFPHTSHCLASG 127
           D SADRRYL+LP L+SGRIY IDTK++P APSL+KVVEP++I +KTGLAFPHTSHCLASG
Sbjct: 100 DASADRRYLVLPGLISGRIYAIDTKTDPKAPSLYKVVEPKEIAEKTGLAFPHTSHCLASG 159

Query: 128 DIMVSCLGDKDGNAAGSG-------------WEKPGNSPLFGYDFWYQPRHKTMVSSSWG 187
           D++VSCLGDK+GNA G+G             W+KPG+ PLFGYDFWYQPR KTM+S+SWG
Sbjct: 160 DMLVSCLGDKEGNAKGNGFLLLDSDFNVKSRWDKPGHGPLFGYDFWYQPRFKTMISTSWG 219

Query: 188 APSAFTKGFNLQHVADGLYGKHLHVYSWPDGELKQTLDLGDTGLIPLEV 224
           AP AF+KGFNLQHVADGLYG HLH+Y WP+GE+KQ +DLG+TGL+PLE+
Sbjct: 220 APKAFSKGFNLQHVADGLYGSHLHIYQWPEGEMKQIIDLGNTGLLPLEI 268

[Close]
BLAST of Carg26012 vs. TAIR10
Match: AT4G14030.1 (selenium-binding protein 1)

HSP 1 Score: 374.8 bits (961), Expect = 3.8e-104
Identity = 165/229 (72.05%), Postives = 194/229 (84.72%), Query Frame = 0 

Query: 8   LVLNCCLKTGTGRNKPDYLATVDVDPNSPNYSKVIHRLPAPYLGDELHHSGWNSCSSCHG 67
           L+    + TGTG +KPDYLATVDVDP+SP+YS VIHRLP P++GDELHHSGWNSCSSCHG
Sbjct: 43  LIYVTAVYTGTGIDKPDYLATVDVDPSSPSYSSVIHRLPMPFVGDELHHSGWNSCSSCHG 102

Query: 68  DPSADRRYLILPSLVSGRIYVIDTKSNPSAPSLHKVVEPEDIIQKTGLAFPHTSHCLASG 127
           D S DRRYL+LPSL+SGRIY IDTK NP APSL+K V+P++I  KTGLAFPHT+HCLA+G
Sbjct: 103 DASVDRRYLVLPSLISGRIYAIDTKENPRAPSLYKYVDPKEIADKTGLAFPHTAHCLATG 162

Query: 128 DIMVSCLGDKDGNAAGSG-------------WEKPGNSPLFGYDFWYQPRHKTMVSSSWG 187
           +I+VSCLGD++GNA G+G             WEKPG+SPL+GYDFWYQPRHKTM+S+SWG
Sbjct: 163 EILVSCLGDEEGNAKGNGFLLLDSDFNIKNRWEKPGHSPLYGYDFWYQPRHKTMISTSWG 222

Query: 188 APSAFTKGFNLQHVADGLYGKHLHVYSWPDGELKQTLDLGDTGLIPLEV 224
           AP AF+KGFNLQHVADGLYG HLHVYSWP GE+KQ +DLG TGL+PLE+
Sbjct: 223 APKAFSKGFNLQHVADGLYGSHLHVYSWPGGEIKQLIDLGPTGLLPLEI 271

[Close]
BLAST of Carg26012 vs. TAIR10
Match: AT3G23800.1 (selenium-binding protein 3)

HSP 1 Score: 369.8 bits (948), Expect = 1.2e-102
Identity = 166/229 (72.49%), Postives = 192/229 (83.84%), Query Frame = 0 

Query: 8   LVLNCCLKTGTGRNKPDYLATVDVDPNSPNYSKVIHRLPAPYLGDELHHSGWNSCSSCHG 67
           L+    + TGTG+ KPDYLATVDV+P+S  YS VIHRLP PYL DELHHSGWNSCSSC+G
Sbjct: 33  LIYVAAIYTGTGQAKPDYLATVDVEPSSSTYSSVIHRLPMPYLEDELHHSGWNSCSSCYG 92

Query: 68  DPSADRRYLILPSLVSGRIYVIDTKSNPSAPSLHKVVEPEDIIQKTGLAFPHTSHCLASG 127
           D S +RRYLILPSL+SGRIYVIDTK+NP  PSLHK V+P ++++KTGLA+PH  HCLASG
Sbjct: 93  DSSCERRYLILPSLLSGRIYVIDTKTNPREPSLHKFVDPAEVLEKTGLAYPHQPHCLASG 152

Query: 128 DIMVSCLGDKDGNAAGSG-------------WEKPGNSPLFGYDFWYQPRHKTMVSSSWG 187
           D++VSCLGD+DGNA GSG             WEK GNSPL+GYDFWYQPRHKTM+S+SWG
Sbjct: 153 DVLVSCLGDEDGNAEGSGFLLLDSEFNIKGRWEKDGNSPLYGYDFWYQPRHKTMISTSWG 212

Query: 188 APSAFTKGFNLQHVADGLYGKHLHVYSWPDGELKQTLDLGDTGLIPLEV 224
           AP+AFTKGF+L+ V+DGLYGKHLHVYSWP GELKQ LDLGDTGL+PLEV
Sbjct: 213 APAAFTKGFDLKDVSDGLYGKHLHVYSWPQGELKQILDLGDTGLLPLEV 261

[Close]
BLAST of Carg26012 vs. Swiss-Prot
Match: sp|Q93WN0|SEBP2_ARATH (Selenium-binding protein 2 OS=Arabidopsis thaliana OX=3702 GN=SBP2 PE=1 SV=1)

HSP 1 Score: 375.2 bits (962), Expect = 5.2e-103
Identity = 164/229 (71.62%), Postives = 195/229 (85.15%), Query Frame = 0 

Query: 8   LVLNCCLKTGTGRNKPDYLATVDVDPNSPNYSKVIHRLPAPYLGDELHHSGWNSCSSCHG 67
           L+    L +GTGR+KPDYLATVDVDP+SP +S VIHRL  PY+GDELHH+GWNSCSSCHG
Sbjct: 40  LIYVTALYSGTGRDKPDYLATVDVDPSSPTFSSVIHRLKMPYIGDELHHTGWNSCSSCHG 99

Query: 68  DPSADRRYLILPSLVSGRIYVIDTKSNPSAPSLHKVVEPEDIIQKTGLAFPHTSHCLASG 127
           D SADRRYL+LP L+SGRIY IDTK++P APSL+KVVEP++I +KTGLAFPHTSHCLASG
Sbjct: 100 DASADRRYLVLPGLISGRIYAIDTKTDPKAPSLYKVVEPKEIAEKTGLAFPHTSHCLASG 159

Query: 128 DIMVSCLGDKDGNAAGSG-------------WEKPGNSPLFGYDFWYQPRHKTMVSSSWG 187
           D++VSCLGDK+GNA G+G             W+KPG+ PLFGYDFWYQPR KTM+S+SWG
Sbjct: 160 DMLVSCLGDKEGNAKGNGFLLLDSDFNVKSRWDKPGHGPLFGYDFWYQPRFKTMISTSWG 219

Query: 188 APSAFTKGFNLQHVADGLYGKHLHVYSWPDGELKQTLDLGDTGLIPLEV 224
           AP AF+KGFNLQHVADGLYG HLH+Y WP+GE+KQ +DLG+TGL+PLE+
Sbjct: 220 APKAFSKGFNLQHVADGLYGSHLHIYQWPEGEMKQIIDLGNTGLLPLEI 268

[Close]
BLAST of Carg26012 vs. Swiss-Prot
Match: sp|O23264|SEBP1_ARATH (Selenium-binding protein 1 OS=Arabidopsis thaliana OX=3702 GN=SBP1 PE=1 SV=1)

HSP 1 Score: 374.8 bits (961), Expect = 6.8e-103
Identity = 165/229 (72.05%), Postives = 194/229 (84.72%), Query Frame = 0 

Query: 8   LVLNCCLKTGTGRNKPDYLATVDVDPNSPNYSKVIHRLPAPYLGDELHHSGWNSCSSCHG 67
           L+    + TGTG +KPDYLATVDVDP+SP+YS VIHRLP P++GDELHHSGWNSCSSCHG
Sbjct: 43  LIYVTAVYTGTGIDKPDYLATVDVDPSSPSYSSVIHRLPMPFVGDELHHSGWNSCSSCHG 102

Query: 68  DPSADRRYLILPSLVSGRIYVIDTKSNPSAPSLHKVVEPEDIIQKTGLAFPHTSHCLASG 127
           D S DRRYL+LPSL+SGRIY IDTK NP APSL+K V+P++I  KTGLAFPHT+HCLA+G
Sbjct: 103 DASVDRRYLVLPSLISGRIYAIDTKENPRAPSLYKYVDPKEIADKTGLAFPHTAHCLATG 162

Query: 128 DIMVSCLGDKDGNAAGSG-------------WEKPGNSPLFGYDFWYQPRHKTMVSSSWG 187
           +I+VSCLGD++GNA G+G             WEKPG+SPL+GYDFWYQPRHKTM+S+SWG
Sbjct: 163 EILVSCLGDEEGNAKGNGFLLLDSDFNIKNRWEKPGHSPLYGYDFWYQPRHKTMISTSWG 222

Query: 188 APSAFTKGFNLQHVADGLYGKHLHVYSWPDGELKQTLDLGDTGLIPLEV 224
           AP AF+KGFNLQHVADGLYG HLHVYSWP GE+KQ +DLG TGL+PLE+
Sbjct: 223 APKAFSKGFNLQHVADGLYGSHLHVYSWPGGEIKQLIDLGPTGLLPLEI 271

[Close]
BLAST of Carg26012 vs. Swiss-Prot
Match: sp|Q9LK38|SEBP3_ARATH (Selenium-binding protein 3 OS=Arabidopsis thaliana OX=3702 GN=SBP3 PE=2 SV=1)

HSP 1 Score: 369.8 bits (948), Expect = 2.2e-101
Identity = 166/229 (72.49%), Postives = 192/229 (83.84%), Query Frame = 0 

Query: 8   LVLNCCLKTGTGRNKPDYLATVDVDPNSPNYSKVIHRLPAPYLGDELHHSGWNSCSSCHG 67
           L+    + TGTG+ KPDYLATVDV+P+S  YS VIHRLP PYL DELHHSGWNSCSSC+G
Sbjct: 33  LIYVAAIYTGTGQAKPDYLATVDVEPSSSTYSSVIHRLPMPYLEDELHHSGWNSCSSCYG 92

Query: 68  DPSADRRYLILPSLVSGRIYVIDTKSNPSAPSLHKVVEPEDIIQKTGLAFPHTSHCLASG 127
           D S +RRYLILPSL+SGRIYVIDTK+NP  PSLHK V+P ++++KTGLA+PH  HCLASG
Sbjct: 93  DSSCERRYLILPSLLSGRIYVIDTKTNPREPSLHKFVDPAEVLEKTGLAYPHQPHCLASG 152

Query: 128 DIMVSCLGDKDGNAAGSG-------------WEKPGNSPLFGYDFWYQPRHKTMVSSSWG 187
           D++VSCLGD+DGNA GSG             WEK GNSPL+GYDFWYQPRHKTM+S+SWG
Sbjct: 153 DVLVSCLGDEDGNAEGSGFLLLDSEFNIKGRWEKDGNSPLYGYDFWYQPRHKTMISTSWG 212

Query: 188 APSAFTKGFNLQHVADGLYGKHLHVYSWPDGELKQTLDLGDTGLIPLEV 224
           AP+AFTKGF+L+ V+DGLYGKHLHVYSWP GELKQ LDLGDTGL+PLEV
Sbjct: 213 APAAFTKGFDLKDVSDGLYGKHLHVYSWPQGELKQILDLGDTGLLPLEV 261

[Close]
BLAST of Carg26012 vs. Swiss-Prot
Match: sp|Q52KZ7|SBP1A_XENLA (Methanethiol oxidase OS=Xenopus laevis OX=8355 GN=selenbp1-a PE=2 SV=1)

HSP 1 Score: 280.8 bits (717), Expect = 1.3e-74
Identity = 129/224 (57.59%), Postives = 152/224 (67.86%), Query Frame = 0 

Query: 13  CLKTGTGRNKPDYLATVDVDPNSPNYSKVIHRLPAPYLGDELHHSGWNSCSSCHGDPSAD 72
           C+   TG NKPDYLATVDVDP SP+YS+VIHRLP P + DELHHSGWN+CSSC+GD S  
Sbjct: 30  CIYRSTGINKPDYLATVDVDPKSPSYSQVIHRLPMPNVNDELHHSGWNTCSSCYGDSSKV 89

Query: 73  RRYLILPSLVSGRIYVIDTKSNPSAPSLHKVVEPEDIIQKTGLAFPHTSHCLASGDIMVS 132
           R  LILP L+S RIYV+D  S+P AP +HK VEP ++  K GLA PHTSHCL  G+IM+S
Sbjct: 90  RNKLILPCLISSRIYVVDVGSDPRAPRIHKTVEPYEVFWKCGLANPHTSHCLGCGEIMIS 149

Query: 133 CLGDKDGNAAG-------------SGWEKPGNSPLFGYDFWYQPRHKTMVSSSWGAPSAF 192
            LGD  GN  G               WE  G S  FGYDFWYQPRH  M+S+ WGAP AF
Sbjct: 150 SLGDPCGNGKGGFVLLDGETFEVKGNWEVEGESAQFGYDFWYQPRHNVMISTEWGAPKAF 209

Query: 193 TKGFNLQHVADGLYGKHLHVYSWPDGELKQTLDLGDTGLIPLEV 224
             GF ++ V  G YG  L+V+ W +  L QT+DLG  GLIPLE+
Sbjct: 210 ALGFKMEDVQAGHYGHSLNVWDWTEHRLVQTIDLGKDGLIPLEI 253

[Close]
BLAST of Carg26012 vs. Swiss-Prot
Match: sp|Q6PHD9|SBP1_DANRE (Methanethiol oxidase OS=Danio rerio OX=7955 GN=selenbp1 PE=2 SV=1)

HSP 1 Score: 278.9 bits (712), Expect = 5.1e-74
Identity = 129/224 (57.59%), Postives = 150/224 (66.96%), Query Frame = 0 

Query: 13  CLKTGTGRNKPDYLATVDVDPNSPNYSKVIHRLPAPYLGDELHHSGWNSCSSCHGDPSAD 72
           C+   T   KPDYLATVD++P SPN+ KVIHRLP P L DELHHSGWN+CSSC  DPS  
Sbjct: 31  CIYRNTDIQKPDYLATVDINPQSPNFCKVIHRLPMPNLKDELHHSGWNACSSCFDDPSKR 90

Query: 73  RRYLILPSLVSGRIYVIDTKSNPSAPSLHKVVEPEDIIQKTGLAFPHTSHCLASGDIMVS 132
           R  LILPSL+S RIYV+D  ++P AP LHK VEP D+  K GLA PHTSHCL SG IM+S
Sbjct: 91  RNRLILPSLISSRIYVVDVGTDPRAPRLHKTVEPTDLFWKCGLANPHTSHCLGSGQIMIS 150

Query: 133 CLGDKDGNAAG-------------SGWEKPGNSPLFGYDFWYQPRHKTMVSSSWGAPSAF 192
            +GD  GN  G               WE+PG++  FGYDFWYQPRH  M+S+ WGAP A 
Sbjct: 151 TMGDPSGNGKGGFVLLDGETFEVIGNWEQPGDAAPFGYDFWYQPRHNVMISTEWGAPKAL 210

Query: 193 TKGFNLQHVADGLYGKHLHVYSWPDGELKQTLDLGDTGLIPLEV 224
             GFN   V  G YG+ LHV+ W   +  QTLDLG+ G IPLEV
Sbjct: 211 GNGFNPADVKAGHYGQRLHVWDWTTHKRIQTLDLGEEGAIPLEV 254

[Close]
BLAST of Carg26012 vs. TrEMBL
Match: tr|A0A1S3C7S4|A0A1S3C7S4_CUCME (selenium-binding protein 2 OS=Cucumis melo OX=3656 GN=LOC103497673 PE=4 SV=1)

HSP 1 Score: 424.1 bits (1089), Expect = 2.0e-115
Identity = 195/228 (85.53%), Postives = 206/228 (90.35%), Query Frame = 0 

Query: 8   LVLNCCLKTGTGRNKPDYLATVDVDPNSPNYSKVIHRLPAPYLGDELHHSGWNSCSSCHG 67
           L+    + +GTGRNKPDYLATVDVDPNSPNYSKVIHRL  PYLGDELHHSGWNSCSSCHG
Sbjct: 34  LIYVTAVYSGTGRNKPDYLATVDVDPNSPNYSKVIHRLSLPYLGDELHHSGWNSCSSCHG 93

Query: 68  DPSADRRYLILPSLVSGRIYVIDTKSNPSAPSLHKVVEPEDIIQKTGLAFPHTSHCLASG 127
           DPSADRR+LILPSL+SGRIYVIDTK+NP+APSLHKVVEPEDIIQKTGL FPHTSHCLASG
Sbjct: 94  DPSADRRFLILPSLLSGRIYVIDTKTNPTAPSLHKVVEPEDIIQKTGLGFPHTSHCLASG 153

Query: 128 DIMVSCLGDKDGNAAGSG-------------WEKPGNSPLFGYDFWYQPRHKTMVSSSWG 187
           DIMVSCLGDKDGNA G+G             WEKPGNSPLFGYDFWYQPRHKTM+SSSWG
Sbjct: 154 DIMVSCLGDKDGNAQGNGFLLLDSEFNVKGRWEKPGNSPLFGYDFWYQPRHKTMISSSWG 213

Query: 188 APSAFTKGFNLQHVADGLYGKHLHVYSWPDGELKQTLDLGDTGLIPLE 223
           APSAFTKGFNLQHVADGLYG+HLHVYSWPDGELKQTLDLGDTGL+PLE
Sbjct: 214 APSAFTKGFNLQHVADGLYGRHLHVYSWPDGELKQTLDLGDTGLLPLE 261

[Close]
BLAST of Carg26012 vs. TrEMBL
Match: tr|A0A0A0K8A3|A0A0A0K8A3_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G007470 PE=4 SV=1)

HSP 1 Score: 421.8 bits (1083), Expect = 9.8e-115
Identity = 195/228 (85.53%), Postives = 205/228 (89.91%), Query Frame = 0 

Query: 8   LVLNCCLKTGTGRNKPDYLATVDVDPNSPNYSKVIHRLPAPYLGDELHHSGWNSCSSCHG 67
           L+    + +GTG NKPDYLATVDVDPNSPNYSKVIHRL  PYLGDELHHSGWNSCSSCHG
Sbjct: 34  LIYVTAVYSGTGINKPDYLATVDVDPNSPNYSKVIHRLSFPYLGDELHHSGWNSCSSCHG 93

Query: 68  DPSADRRYLILPSLVSGRIYVIDTKSNPSAPSLHKVVEPEDIIQKTGLAFPHTSHCLASG 127
           DPSADRR+LILPSL+SGRIYVIDTKSNP+APSLHKVVEPEDI+QKTGLAFPHTSHCLASG
Sbjct: 94  DPSADRRFLILPSLLSGRIYVIDTKSNPTAPSLHKVVEPEDIVQKTGLAFPHTSHCLASG 153

Query: 128 DIMVSCLGDKDGNAAGSG-------------WEKPGNSPLFGYDFWYQPRHKTMVSSSWG 187
           DIMVSCLGDKDGNA G+G             WEKPGNSPLFGYDFWYQPRHKTM+SSSWG
Sbjct: 154 DIMVSCLGDKDGNAQGNGFLLLDSEFNVKGRWEKPGNSPLFGYDFWYQPRHKTMISSSWG 213

Query: 188 APSAFTKGFNLQHVADGLYGKHLHVYSWPDGELKQTLDLGDTGLIPLE 223
           APSAF KGFNLQHVADGLYGKHLHVYSWPDGELKQTLDLGDTGL+PLE
Sbjct: 214 APSAFIKGFNLQHVADGLYGKHLHVYSWPDGELKQTLDLGDTGLLPLE 261

[Close]
BLAST of Carg26012 vs. TrEMBL
Match: tr|A0A061EKF5|A0A061EKF5_THECC (Selenium-binding protein 2 isoform 1 OS=Theobroma cacao OX=3641 GN=TCM_020211 PE=4 SV=1)

HSP 1 Score: 415.2 bits (1066), Expect = 9.2e-113
Identity = 187/229 (81.66%), Postives = 206/229 (89.96%), Query Frame = 0 

Query: 8   LVLNCCLKTGTGRNKPDYLATVDVDPNSPNYSKVIHRLPAPYLGDELHHSGWNSCSSCHG 67
           L+   C+ TGTGR KPD+LATVDVDPNSP YSKVIHRLP PYLGDELHHSGWNSCSSCHG
Sbjct: 29  LIYVTCVYTGTGREKPDFLATVDVDPNSPTYSKVIHRLPVPYLGDELHHSGWNSCSSCHG 88

Query: 68  DPSADRRYLILPSLVSGRIYVIDTKSNPSAPSLHKVVEPEDIIQKTGLAFPHTSHCLASG 127
           DPSA+RR+LILPSLVSG IYVIDT++NP APSLHKVV+PEDI+QKTGLA+PHTSHCLASG
Sbjct: 89  DPSAERRFLILPSLVSGHIYVIDTQTNPKAPSLHKVVDPEDIVQKTGLAYPHTSHCLASG 148

Query: 128 DIMVSCLGDKDGNAAGSG-------------WEKPGNSPLFGYDFWYQPRHKTMVSSSWG 187
           DIMVSCLGDKDGNA G+G             WEKPG+SPLFGYDFWYQPRHKTM+SSSWG
Sbjct: 149 DIMVSCLGDKDGNAKGNGFLLLDSEFNVKGRWEKPGHSPLFGYDFWYQPRHKTMISSSWG 208

Query: 188 APSAFTKGFNLQHVADGLYGKHLHVYSWPDGELKQTLDLGDTGLIPLEV 224
           AP+AFTKGFNLQHVADGLYG+HL+VYSWPDGELKQTLDLGD+GL+PLE+
Sbjct: 209 APAAFTKGFNLQHVADGLYGRHLYVYSWPDGELKQTLDLGDSGLLPLEI 257

[Close]
BLAST of Carg26012 vs. TrEMBL
Match: tr|A0A2P4HXZ8|A0A2P4HXZ8_QUESU (Selenium-binding protein 1 OS=Quercus suber OX=58331 GN=CFP56_51376 PE=4 SV=1)

HSP 1 Score: 412.5 bits (1059), Expect = 5.9e-112
Identity = 185/229 (80.79%), Postives = 205/229 (89.52%), Query Frame = 0 

Query: 8   LVLNCCLKTGTGRNKPDYLATVDVDPNSPNYSKVIHRLPAPYLGDELHHSGWNSCSSCHG 67
           L+   C+ TGTGR KPDYLATVD+DP+SP YSKVIHRLP PYLGDELHHSGWN+CSSCHG
Sbjct: 45  LIYVTCVYTGTGREKPDYLATVDIDPSSPTYSKVIHRLPVPYLGDELHHSGWNTCSSCHG 104

Query: 68  DPSADRRYLILPSLVSGRIYVIDTKSNPSAPSLHKVVEPEDIIQKTGLAFPHTSHCLASG 127
           DPSADRR+LILPSLVSGRIYVIDTK+N  APSLHKVVEPEDI+QKTGLA+PHTSHCLASG
Sbjct: 105 DPSADRRFLILPSLVSGRIYVIDTKTNSKAPSLHKVVEPEDIVQKTGLAYPHTSHCLASG 164

Query: 128 DIMVSCLGDKDGNAAGSG-------------WEKPGNSPLFGYDFWYQPRHKTMVSSSWG 187
           D++VSCLGDKDGNAAG+G             WEKPG+SPLFGYDFWYQP+HKTM+SSSWG
Sbjct: 165 DLLVSCLGDKDGNAAGNGFLLLDSEFNVKGRWEKPGHSPLFGYDFWYQPQHKTMISSSWG 224

Query: 188 APSAFTKGFNLQHVADGLYGKHLHVYSWPDGELKQTLDLGDTGLIPLEV 224
           AP+AFTKGFNLQHV+DGLYG+HLHVYSWP GELKQTLDLG TGL+PLE+
Sbjct: 225 APAAFTKGFNLQHVSDGLYGRHLHVYSWPGGELKQTLDLGSTGLLPLEI 273

[Close]
BLAST of Carg26012 vs. TrEMBL
Match: tr|A0A0B0MQ75|A0A0B0MQ75_GOSAR (Selenium-binding 2-like protein OS=Gossypium arboreum OX=29729 GN=F383_25067 PE=4 SV=1)

HSP 1 Score: 411.4 bits (1056), Expect = 1.3e-111
Identity = 183/230 (79.57%), Postives = 206/230 (89.57%), Query Frame = 0 

Query: 7   MLVLNCCLKTGTGRNKPDYLATVDVDPNSPNYSKVIHRLPAPYLGDELHHSGWNSCSSCH 66
           +L+   C+ TGTGR KPD+LATVDVDPNSP YSKVIHRLP PY+GDELHHSGWN+CSSCH
Sbjct: 28  VLIYVTCVYTGTGREKPDFLATVDVDPNSPTYSKVIHRLPVPYIGDELHHSGWNACSSCH 87

Query: 67  GDPSADRRYLILPSLVSGRIYVIDTKSNPSAPSLHKVVEPEDIIQKTGLAFPHTSHCLAS 126
           GDPSADRR+LILPSLVSGRIYV+DTK+NP APSLHKVV+P+DI++KTGLA+PHTSHCLAS
Sbjct: 88  GDPSADRRFLILPSLVSGRIYVVDTKTNPKAPSLHKVVQPDDIVKKTGLAYPHTSHCLAS 147

Query: 127 GDIMVSCLGDKDGNAAGSG-------------WEKPGNSPLFGYDFWYQPRHKTMVSSSW 186
           GD+MVSCLGDKDGNA G+G             WEKPG+SP FGYDFWYQPRHKTM+SSSW
Sbjct: 148 GDVMVSCLGDKDGNAKGNGFLLLDSQFNVKGRWEKPGHSPSFGYDFWYQPRHKTMISSSW 207

Query: 187 GAPSAFTKGFNLQHVADGLYGKHLHVYSWPDGELKQTLDLGDTGLIPLEV 224
           GAP+AFTKGFNLQHVADGLYG+HL VYSWPDGELKQT+DLG+TGLIPLE+
Sbjct: 208 GAPAAFTKGFNLQHVADGLYGRHLFVYSWPDGELKQTMDLGNTGLIPLEI 257

The following BLAST results are available for this feature:
BLAST of Carg26012 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_023006568.18.1e-12191.23selenium-binding protein 1-like [Cucurbita maxima][more]
XP_023548464.15.3e-12090.35selenium-binding protein 2-like [Cucurbita pepo subsp. pepo][more]
XP_022958900.11.5e-11989.91selenium-binding protein 1-like [Cucurbita moschata][more]
XP_022147175.17.9e-11685.15selenium-binding protein 1-like [Momordica charantia][more]
XP_008458148.13.0e-11585.53PREDICTED: selenium-binding protein 2 [Cucumis melo][more]
BLAST of Carg26012 vs. TAIR10
Match NameE-valueIdentityDescription
AT4G14040.12.9e-10471.62selenium-binding protein 2[more]
AT4G14030.13.8e-10472.05selenium-binding protein 1[more]
AT3G23800.11.2e-10272.49selenium-binding protein 3[more]
BLAST of Carg26012 vs. Swiss-Prot
Match NameE-valueIdentityDescription
sp|Q93WN0|SEBP2_ARATH5.2e-10371.62Selenium-binding protein 2 OS=Arabidopsis thaliana OX=3702 GN=SBP2 PE=1 SV=1[more]
sp|O23264|SEBP1_ARATH6.8e-10372.05Selenium-binding protein 1 OS=Arabidopsis thaliana OX=3702 GN=SBP1 PE=1 SV=1[more]
sp|Q9LK38|SEBP3_ARATH2.2e-10172.49Selenium-binding protein 3 OS=Arabidopsis thaliana OX=3702 GN=SBP3 PE=2 SV=1[more]
sp|Q52KZ7|SBP1A_XENLA1.3e-7457.59Methanethiol oxidase OS=Xenopus laevis OX=8355 GN=selenbp1-a PE=2 SV=1[more]
sp|Q6PHD9|SBP1_DANRE5.1e-7457.59Methanethiol oxidase OS=Danio rerio OX=7955 GN=selenbp1 PE=2 SV=1[more]
BLAST of Carg26012 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A1S3C7S4|A0A1S3C7S4_CUCME2.0e-11585.53selenium-binding protein 2 OS=Cucumis melo OX=3656 GN=LOC103497673 PE=4 SV=1[more]
tr|A0A0A0K8A3|A0A0A0K8A3_CUCSA9.8e-11585.53Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G007470 PE=4 SV=1[more]
tr|A0A061EKF5|A0A061EKF5_THECC9.2e-11381.66Selenium-binding protein 2 isoform 1 OS=Theobroma cacao OX=3641 GN=TCM_020211 PE... [more]
tr|A0A2P4HXZ8|A0A2P4HXZ8_QUESU5.9e-11280.79Selenium-binding protein 1 OS=Quercus suber OX=58331 GN=CFP56_51376 PE=4 SV=1[more]
tr|A0A0B0MQ75|A0A0B0MQ75_GOSAR1.3e-11179.57Selenium-binding 2-like protein OS=Gossypium arboreum OX=29729 GN=F383_25067 PE=... [more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0008430selenium binding
Vocabulary: INTERPRO
TermDefinition
IPR008826Se-bd
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0008430 selenium binding
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Carg26012-RACarg26012-RAmRNA


InterPro
Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR008826Selenium-binding proteinPFAMPF05694SBP56coord: 10..223
e-value: 6.6E-89
score: 298.7
IPR008826Selenium-binding proteinPANTHERPTHR23300SELENIUM-BINDING PROTEINcoord: 8..223
NoneNo IPR availablePANTHERPTHR23300:SF0SELENIUM-BINDING PROTEIN 1coord: 8..223
NoneNo IPR availableSUPERFAMILYSSF750113-carboxy-cis,cis-mucoante lactonizing enzymecoord: 37..216