Carg25986 (gene) Silver-seed gourd | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Carg25986
Type	gene
Organism	Cucurbita argyrosperma (Silver-seed gourd)
Description	rho GTPase-activating protein 7
Location	Cucurbita_argyrosperma_scaffold_311 : 123067 .. 126370 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCCTTGAAGAGGTTCCCATATCAAAGCACAAGAATACCCCCTGAAGCTCCCACAGAACTGAGAGTCCCCCACTCCACAAGCTTCTTATGAAAGCCTGACAACACTCCCTCACTTCGTCTCGTTTGTGCATTTAGATGCTTATTTGTTGTCTGATATTCACTTTTTGGCCTATGCATGACCATATAGGTTTCAAGATTGCAAGAGCAATTGCAAGCAGAAAGAGATCTTAGAGCTGCTTTGGAAGTTGGCCTAAGCATGTCTTCTGGACAGTTTAATAATTCTCGTGGCATGGATTTGAAGGTTTGTCTGCATGCTTTAGAATTTACTTTTTCTTCACGTCCATTATTGATTAGTCATATACATTCTCATGAGGCATGATTATGCTGATGTGAAGACAAGGGCTGAGCTTGAGGAGATTGCTCTTGCTGAAGCAGATGTGGCTCGGTTAAAGCAGAAAGTTGCTGAACTCCATCACCAATTGAATCAGCAACGGCAGCACAACTATGGTTCTCTCTCTGATGCATCTGACCGATATCAGCATGTTCAGAATCATGGTTCTCAATTGTGAGTGCCTCGTGTTATGTTACCTTGTTGGTTCTTTAGTTTAAGGGTCCGAGGTTATAGACCATGGTTAAACTCTTCTTATGGCAGTTTGTGGCATCTTGTGGTTATTCAAAGTATCTTATATTATAATTCTCTCTATTGAAAATTCTAGATGGCATAATTTTTTTTGGGCATCGTAGAACTGGAAATAAAATTTTAATTATCTTCAAATCTTATCCTCCGATTGGTTTTGTGTTAGCAGAAAATTCATTTATTATTTCTCTATGCTTTAGAGAAGTTTTACACAGAAGTAATAAAGAAAATAGTTAACTGCCGAATTTTTATTGTGTTTAAGAACCAGTGACTTTTGGCAACTCAAGGTATTAGCTTCGTAAATAGATCTACTTTTATCTTATGAGCATGTATAAACTCTATGATTTCAAATTAGAAATTAAAAGTTCAATTTGAACTTTCTGTTCAACTATAGATTATCTTTTGCATTCTCATAAGTTTCAATCTTAATATTCTAAGCTATCCTTAAATATATAGTGACTTCCATAGGGTAAAGTGCCCTACAATCTTGCACAAGAGTGTGAATGAGTCTGTTTCATGGTTCATAAAGATAGTGAAAATTTTGACGATTGCATACAGTTTTTTTTTTTAAAAATCACAAAGTTTGGTCAACTTTTCAGCTGTTACTTGGTTCACTTGCAGACAAATCTTAGGATTTCTTGTTTTCTTTGAAATGGTTCAATGCACGTAGCCTCCGTCCCCCTCTCATTTTCTGAAAAAATGGGCTGGTAGCCTATCTCGGTAGAATTCAGGGCTATTCACATGATTAAATCCTCAAGGGTGTCTTAGAGAAAATGATTAGGCTTGTTATTCTCTAACTTGGAGCTAATTCCTTGCTCATAATAATTAATATTTAGGTTATTTTGTACAATGTTATAGCACTTCACTCCCCATGGTAGTGTCTGGTTGGGTAGGTTACTTTAATATGACATCGAATGTCTTGGTAAATTTGTAGTGTTGAATATGTGAAAATCTCACTAAATTGTTTTTACTCCGAGAAAGCACTACTTCTTTTCTCCTCAATGTTTTTAGTTTCCGCAGGAGATTTCTTCAGCAAGATTTTGATTCGACCCTAGCTTTTGTTAATCATGAAAGGAAACAAAGGAGTGAGGTATCTTTTCTGTCACTATACTTCCTTGTGCATTGTCCTTCATAGTTAAATAAACGGTTTTTTTTTCTTTCTGTATGAGTAGCAAGTGATTATCATCATCTATGGTTCCAATTATGATTGGTTGTTATCTGATATAAACTTTTTACATTGGCACAAAGTTCATCTTTAAACATTGAGAGAATAAAATTTTGAGCTGTTTACTGCCTTAGATGCATGAAATGCCTAGCTGTCTAGACGGCTTATCTGGTTGTCTAGTTCTGTATGTAAATTGTGTGATGTTAATGATAAGGTGGTCATGTACCTAGCGTTTTATATCTTATAATTTTTCTTGGCAACCGTTAAGTTTAAACTCTTATAATTTTCTTTGAATCTCAAATGCGTTCAAAAAAGAAACTCAGTGAGGTATTATTTAATACAGGTAGCCATACAAAGGCATTTGGATTTACTACAATTTACTCTTCCAACGGCATTGGTAGACTAACTTATGGTGGCTGGTTGTCTATCTAGTTTATCACTTAGGAGATGCTTAATAGCTAATATATTATTCCCATATTCTGGCTTCGTCTAGGAGAAGAATGATCTAATCCATCTGCAATTTAACATTTCATTTCCCATATTATTTGATCTTCCTCGTCTCATGCATTAAACTGAAACCTGTTTCTATTTATTTATTATTATTGTTTTTTTATTTTGGTACAGGAGGGTATGATGGGAGGTGATTGGAGAAATATCAAAGGACAAGTATTAGGATCTTCAAATAGTAATAAGCAAATTCCACGGAAGCTATTTATGGATTCATTAAGCCCAAGCGACTCTAAAAGTACCGAGGTTTCTACAAGCATGTCTGTGGATGAACTTGGTGTTGATTCTGCTTCTTTCCCTTCTACCTCAAAAGCAGGAGAGGTGAACGAATCCGTCCTCTCGCCCTCTCATCGTAAACAAGTCTATAACTTTAATGATAATCTGCATGGCTGAGGTCTAGAACATCTTTTACATTCAGATTTAAACTTTGCTTCCAGGTTTCGGATCACTCAAGACACTTGATCGTGCCTTCCTCAACATTGGTAGAATTAACAACCCGACTCGACTTCTTCAAGGAGAGACGTTCTCAATTGATGGAACAGCTCCATAATCTCGATTTAAATTATGGTGCATCATCCTCACAAGACTTCATCTATAAACAACCGCCATCTCCACCATGGAAATAGCAACGCCGAGCAGGCAAGTGTCTCTATCCATAAGTAGTTCCAATCATCTATTCGTTGTATATCCTCGTCCTATAGCTATATTGTAAGCAAGTTCTTTGTGTGTGCCTTTCTAATATTTAAGTTTGGTCTTTCATCTTTAATTTCCTTCCTTTCTTTTTCTCTCTTTCTTATTTTTCCTTACTCGATTGAAGACTTTGGTGGGTTTTGTATCTTCTAATTCGTTTGTTGTGCATTGATTTTATTGAGGTTTAGACTGAGCGAAGGTGGCTCTTTTTAAAACAATAGTTAAGGCCTTGGCGTTGAACATATATAATATCATATTTAGTTTCAGAGATTGGAATTTTTTTTCCTTTTCCGGGTGCGAAGG

mRNA sequence

ATGGCCTTGAAGAGGTTCCCATATCAAAGCACAAGAATACCCCCTGAAGCTCCCACAGAACTGAGAGTTTCAAGATTGCAAGAGCAATTGCAAGCAGAAAGAGATCTTAGAGCTGCTTTGGAAGTTGGCCTAAGCATGTCTTCTGGACAGTTTAATAATTCTCGTGGCATGGATTTGAAGACAAGGGCTGAGCTTGAGGAGATTGCTCTTGCTGAAGCAGATGTGGCTCGGTTAAAGCAGAAAGTTGCTGAACTCCATCACCAATTGAATCAGCAACGGCAGCACAACTATGGTTCTCTCTCTGATGCATCTGACCGATATCAGCATGTTCAGAATCATGGTTCTCAATTTTTCCGCAGGAGATTTCTTCAGCAAGATTTTGATTCGACCCTAGCTTTTGTTAATCATGAAAGGAAACAAAGGAGTGAGGAGGGTATGATGGGAGGTGATTGGAGAAATATCAAAGGACAAGTATTAGGATCTTCAAATAGTAATAAGCAAATTCCACGGAAGCTATTTATGGATTCATTAAGCCCAAGCGACTCTAAAAGTACCGAGGTTTCTACAAGCATGTCTGTGGATGAACTTGGTGTTGATTCTGCTTCTTTCCCTTCTACCTCAAAAGCAGGAGAGGTGAACGAATCCGTCCTCTCGCCCTCTCATCGTTTCGGATCACTCAAGACACTTGATCGTGCCTTCCTCAACATTGGTAGAATTAACAACCCGACTCGACTTCTTCAAGGAGAGACGTTCTCAATTGATGGAACAGCTCCATAATCTCGATTTAAATTATGGTGCATCATCCTCACAAGACTTCATCTATAAACAACCGCCATCTCCACCATGGAAATAGCAACGCCGAGCAGGCAAGTGTCTCTATCCATAAGTAGTTCCAATCATCTATTCGTTGTATATCCTCGTCCTATAGCTATATTGTAAGCAAGTTCTTTGTGTGTGCCTTTCTAATATTTAAGTTTGGTCTTTCATCTTTAATTTCCTTCCTTTCTTTTTCTCTCTTTCTTATTTTTCCTTACTCGATTGAAGACTTTGGTGGGTTTTGTATCTTCTAATTCGTTTGTTGTGCATTGATTTTATTGAGGTTTAGACTGAGCGAAGGTGGCTCTTTTTAAAACAATAGTTAAGGCCTTGGCGTTGAACATATATAATATCATATTTAGTTTCAGAGATTGGAATTTTTTTTCCTTTTCCGGGTGCGAAGG

Coding sequence (CDS)

ATGGCCTTGAAGAGGTTCCCATATCAAAGCACAAGAATACCCCCTGAAGCTCCCACAGAACTGAGAGTTTCAAGATTGCAAGAGCAATTGCAAGCAGAAAGAGATCTTAGAGCTGCTTTGGAAGTTGGCCTAAGCATGTCTTCTGGACAGTTTAATAATTCTCGTGGCATGGATTTGAAGACAAGGGCTGAGCTTGAGGAGATTGCTCTTGCTGAAGCAGATGTGGCTCGGTTAAAGCAGAAAGTTGCTGAACTCCATCACCAATTGAATCAGCAACGGCAGCACAACTATGGTTCTCTCTCTGATGCATCTGACCGATATCAGCATGTTCAGAATCATGGTTCTCAATTTTTCCGCAGGAGATTTCTTCAGCAAGATTTTGATTCGACCCTAGCTTTTGTTAATCATGAAAGGAAACAAAGGAGTGAGGAGGGTATGATGGGAGGTGATTGGAGAAATATCAAAGGACAAGTATTAGGATCTTCAAATAGTAATAAGCAAATTCCACGGAAGCTATTTATGGATTCATTAAGCCCAAGCGACTCTAAAAGTACCGAGGTTTCTACAAGCATGTCTGTGGATGAACTTGGTGTTGATTCTGCTTCTTTCCCTTCTACCTCAAAAGCAGGAGAGGTGAACGAATCCGTCCTCTCGCCCTCTCATCGTTTCGGATCACTCAAGACACTTGATCGTGCCTTCCTCAACATTGGTAGAATTAACAACCCGACTCGACTTCTTCAAGGAGAGACGTTCTCAATTGATGGAACAGCTCCATAA

Protein sequence

MALKRFPYQSTRIPPEAPTELRVSRLQEQLQAERDLRAALEVGLSMSSGQFNNSRGMDLKTRAELEEIALAEADVARLKQKVAELHHQLNQQRQHNYGSLSDASDRYQHVQNHGSQFFRRRFLQQDFDSTLAFVNHERKQRSEEGMMGGDWRNIKGQVLGSSNSNKQIPRKLFMDSLSPSDSKSTEVSTSMSVDELGVDSASFPSTSKAGEVNESVLSPSHRFGSLKTLDRAFLNIGRINNPTRLLQGETFSIDGTAP

Homology

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BLAST of Carg25986 vs. NCBI nr
Match: XP_022930042.1 (rho GTPase-activating protein 7-like [Cucurbita moschata])

HSP 1 Score: 344.4 bits (882), Expect = 3.4e-91
Identity = 187/195 (95.90%), Postives = 189/195 (96.92%), Query Frame = 0


Query: 20  ELRVSRLQEQLQAERDLRAALEVGLSMSSGQFNNSRGMDLKTRAELEEIALAEADVARLK 79
           E  VSRLQEQLQAERDLRAALEVGLSMSSGQFNNSRGMDLKTRAELEEIALAEADVARLK
Sbjct: 620 EQDVSRLQEQLQAERDLRAALEVGLSMSSGQFNNSRGMDLKTRAELEEIALAEADVARLK 679

Query: 80  QKVAELHHQLNQQRQHNYGSLSDASDRYQHVQNHGSQFFRRRFLQQDFDSTLAFVNHERK 139
           QKVAELHHQLNQQRQHNYGSLSDASDRYQHVQNHGSQ    RFLQQDFDSTLAFVNHERK
Sbjct: 680 QKVAELHHQLNQQRQHNYGSLSDASDRYQHVQNHGSQL---RFLQQDFDSTLAFVNHERK 739

Query: 140 QRSEEGMMGGDWRNIKGQVLGSSNSNKQIPRKLFMDSLSPSDSKSTEVSTSMSVDELGVD 199
           QRSEEGMMGGDWRNIKGQVLGSSNSNKQIPRKLFMDSLSPSDSKSTEVSTSMSVDELGVD
Sbjct: 740 QRSEEGMMGGDWRNIKGQVLGSSNSNKQIPRKLFMDSLSPSDSKSTEVSTSMSVDELGVD 799

Query: 200 SASFPSTSKAGEVNE 215
           SASFPSTSKAGEV++
Sbjct: 800 SASFPSTSKAGEVSD 811

[Close]

BLAST of Carg25986 vs. NCBI nr
Match: XP_023530617.1 (rho GTPase-activating protein 7-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 342.8 bits (878), Expect = 1.0e-90
Identity = 186/195 (95.38%), Postives = 189/195 (96.92%), Query Frame = 0


Query: 20  ELRVSRLQEQLQAERDLRAALEVGLSMSSGQFNNSRGMDLKTRAELEEIALAEADVARLK 79
           E  VSRLQEQLQAERDLRAALEVGLSMSSGQFNNSRGMDLKTRAELEEIALAEADVARLK
Sbjct: 620 EQDVSRLQEQLQAERDLRAALEVGLSMSSGQFNNSRGMDLKTRAELEEIALAEADVARLK 679

Query: 80  QKVAELHHQLNQQRQHNYGSLSDASDRYQHVQNHGSQFFRRRFLQQDFDSTLAFVNHERK 139
           QKVAELHHQLNQQRQHNYGSLSDASDRYQHVQNHGSQ    RFLQQDFDSTLAFVNHERK
Sbjct: 680 QKVAELHHQLNQQRQHNYGSLSDASDRYQHVQNHGSQL---RFLQQDFDSTLAFVNHERK 739

Query: 140 QRSEEGMMGGDWRNIKGQVLGSSNSNKQIPRKLFMDSLSPSDSKSTEVSTSMSVDELGVD 199
           QRSEEGMMGGDWRNIKGQVLGSSNSNKQIPRKLF+DSLSPSDSKSTEVSTSMSVDELGVD
Sbjct: 740 QRSEEGMMGGDWRNIKGQVLGSSNSNKQIPRKLFVDSLSPSDSKSTEVSTSMSVDELGVD 799

Query: 200 SASFPSTSKAGEVNE 215
           SASFPSTSKAGEV++
Sbjct: 800 SASFPSTSKAGEVSD 811

[Close]

BLAST of Carg25986 vs. NCBI nr
Match: XP_023004696.1 (rho GTPase-activating protein 7-like [Cucurbita maxima])

HSP 1 Score: 339.3 bits (869), Expect = 1.1e-89
Identity = 185/195 (94.87%), Postives = 187/195 (95.90%), Query Frame = 0


Query: 20  ELRVSRLQEQLQAERDLRAALEVGLSMSSGQFNNSRGMDLKTRAELEEIALAEADVARLK 79
           E  VSRLQEQLQAERDLRAALEVGLSMSSGQFNNSRGMDLKTRAELEEIALAEADVARLK
Sbjct: 620 EQDVSRLQEQLQAERDLRAALEVGLSMSSGQFNNSRGMDLKTRAELEEIALAEADVARLK 679

Query: 80  QKVAELHHQLNQQRQHNYGSLSDASDRYQHVQNHGSQFFRRRFLQQDFDSTLAFVNHERK 139
           QKVAELHHQLNQQRQHNYGSLSDASDRYQHVQNHGSQ    RFLQQDFDSTLAFVNHERK
Sbjct: 680 QKVAELHHQLNQQRQHNYGSLSDASDRYQHVQNHGSQL---RFLQQDFDSTLAFVNHERK 739

Query: 140 QRSEEGMMGGDWRNIKGQVLGSSNSNKQIPRKLFMDSLSPSDSKSTEVSTSMSVDELGVD 199
           QRSEEGMMGGDWRNIKGQVLGSSNSNKQIPRKLFMDSLSPSDSKST VSTSMSVDEL VD
Sbjct: 740 QRSEEGMMGGDWRNIKGQVLGSSNSNKQIPRKLFMDSLSPSDSKSTGVSTSMSVDELAVD 799

Query: 200 SASFPSTSKAGEVNE 215
           SASFPSTSKAGEV++
Sbjct: 800 SASFPSTSKAGEVSD 811

[Close]

BLAST of Carg25986 vs. NCBI nr
Match: XP_008450339.1 (PREDICTED: rho GTPase-activating protein 7 [Cucumis melo])

HSP 1 Score: 321.6 bits (823), Expect = 2.4e-84
Identity = 175/193 (90.67%), Postives = 180/193 (93.26%), Query Frame = 0


Query: 20  ELRVSRLQEQLQAERDLRAALEVGLSMSSGQFNNSRGMDLKTRAELEEIALAEADVARLK 79
           E  VSRLQEQLQAERDLRAALEVGLSMSSGQFNNSRGMD KTRAELEEIALAEADVARLK
Sbjct: 620 EQDVSRLQEQLQAERDLRAALEVGLSMSSGQFNNSRGMDSKTRAELEEIALAEADVARLK 679

Query: 80  QKVAELHHQLNQQRQHNYGSLSDASDRYQHVQNHGSQFFRRRFLQQDFDSTLAFVNHERK 139
           QKVAELHHQLNQQRQHNYGSLSDA DRYQHVQNHGSQ    RFLQQDFDSTLAFVNHERK
Sbjct: 680 QKVAELHHQLNQQRQHNYGSLSDACDRYQHVQNHGSQL---RFLQQDFDSTLAFVNHERK 739

Query: 140 QRSEEGMMGGDWRNIKGQVLGSSNSNKQIPRKLFMDSLSPSDSKSTEVSTSMSVDELGVD 199
           QR+EEG+MG DWRNIKGQVLGS+NSNK  PRKLF+DSLSPSDSKSTEVSTSM+VDEL VD
Sbjct: 740 QRNEEGLMGSDWRNIKGQVLGSANSNKPTPRKLFVDSLSPSDSKSTEVSTSMTVDELAVD 799

Query: 200 SASFPSTSKAGEV 213
           SAS PSTSKAGEV
Sbjct: 800 SASLPSTSKAGEV 809

[Close]

BLAST of Carg25986 vs. NCBI nr
Match: XP_004139062.1 (PREDICTED: rho GTPase-activating protein 7 [Cucumis sativus] >KGN66551.1 hypothetical protein Csa_1G629080 [Cucumis sativus])

HSP 1 Score: 319.7 bits (818), Expect = 9.1e-84
Identity = 174/193 (90.16%), Postives = 180/193 (93.26%), Query Frame = 0


Query: 20  ELRVSRLQEQLQAERDLRAALEVGLSMSSGQFNNSRGMDLKTRAELEEIALAEADVARLK 79
           E  VSRLQEQLQAERDLRAALEVGLSMSSGQFNNSRGMD KTRAELEEIALAEADVARLK
Sbjct: 620 EQDVSRLQEQLQAERDLRAALEVGLSMSSGQFNNSRGMDSKTRAELEEIALAEADVARLK 679

Query: 80  QKVAELHHQLNQQRQHNYGSLSDASDRYQHVQNHGSQFFRRRFLQQDFDSTLAFVNHERK 139
           QKVAELHHQLNQQRQHNYGSLSDA DRYQHVQNHGSQ    RFLQQDFDSTLAFVNHERK
Sbjct: 680 QKVAELHHQLNQQRQHNYGSLSDACDRYQHVQNHGSQL---RFLQQDFDSTLAFVNHERK 739

Query: 140 QRSEEGMMGGDWRNIKGQVLGSSNSNKQIPRKLFMDSLSPSDSKSTEVSTSMSVDELGVD 199
           QR+EEG+MG DWRN+KGQVLGS+NS+K  PRKLF+DSLSPSDSKSTEVSTSMSVDEL VD
Sbjct: 740 QRNEEGLMGSDWRNMKGQVLGSANSSKPTPRKLFVDSLSPSDSKSTEVSTSMSVDELAVD 799

Query: 200 SASFPSTSKAGEV 213
           SAS PSTSKAGEV
Sbjct: 800 SASLPSTSKAGEV 809

[Close]

BLAST of Carg25986 vs. TAIR10
Match: AT5G19390.1 (Rho GTPase activation protein (RhoGAP) with PH domain)

HSP 1 Score: 218.0 bits (554), Expect = 6.8e-57
Identity = 128/196 (65.31%), Postives = 153/196 (78.06%), Query Frame = 0


Query: 20  ELRVSRLQEQLQAERDLRAALEVGLSMSSGQFNNSRGMDLKTRAELEEIALAEADVARLK 79
           E  VSRLQEQLQAERDLRAALEVGLSMSSGQF +S G+D KTRAELEEIALAEADVARLK
Sbjct: 618 EQDVSRLQEQLQAERDLRAALEVGLSMSSGQF-SSHGVDSKTRAELEEIALAEADVARLK 677

Query: 80  QKVAELHHQLNQQRQHNYGSLSDASDRYQHVQNHGSQFFRRRFLQQDFDSTLAFVNHERK 139
           QKVAELHHQLNQQRQ ++GS SDA D +Q++QNH  Q   +RFLQQDFDSTLA+VNHERK
Sbjct: 678 QKVAELHHQLNQQRQTHFGSFSDARDTHQYLQNHNPQ---KRFLQQDFDSTLAYVNHERK 737

Query: 140 QRSEEGMMGGDWRNIKGQVLGSSNSNKQIPRKLFMDSLSPSDSKSTEVSTSMSVDEL-GV 199
           QR EE ++G +WRN KG       +++Q  RK   +S + +DSK +E S  +SVD+L  +
Sbjct: 738 QRHEENVLGAEWRNSKGAGSFGVGNSRQPSRKQIPESTNTTDSKISEESGKISVDKLSSI 797

Query: 200 DSASFPSTSKAGEVNE 215
           DS S PSTS+  ++ E
Sbjct: 798 DSPSIPSTSRVLDITE 809

[Close]

BLAST of Carg25986 vs. TAIR10
Match: AT5G12150.1 (Rho GTPase activation protein (RhoGAP) with PH domain)

HSP 1 Score: 166.4 bits (420), Expect = 2.3e-41
Identity = 96/150 (64.00%), Postives = 113/150 (75.33%), Query Frame = 0


Query: 20  ELRVSRLQEQLQAERDLRAALEVGLSMSSGQFNNSRGMDLKTRAELEEIALAEADVARLK 79
           E  V RLQEQLQAERDLR+ALEVGLS+S GQF +S+  D KTRAELEEIALAEADVARLK
Sbjct: 609 EQDVGRLQEQLQAERDLRSALEVGLSISCGQF-SSQAADSKTRAELEEIALAEADVARLK 668

Query: 80  QKVAELHHQLNQQRQHNYGSLSDASDRYQHVQNHGSQFFRRRFLQQDFDSTLAFVNHERK 139
           QKVAELHHQL+QQRQH+  SL DA   +Q + NH +Q    +  QQDFDS LAFVNHER 
Sbjct: 669 QKVAELHHQLSQQRQHHLSSLPDAQSHHQFLHNHNTQL---KSFQQDFDSILAFVNHERN 728

Query: 140 QRSEEGMMGGDWRNIKGQVLGSSNSNKQIP 170
           QR++E  +  DWRN +G       +N+Q+P
Sbjct: 729 QRTDETSLRADWRNGRG-------NNRQVP 747

[Close]

BLAST of Carg25986 vs. TAIR10
Match: AT4G24580.1 (Rho GTPase activation protein (RhoGAP) with PH domain)

HSP 1 Score: 61.6 bits (148), Expect = 8.1e-10
Identity = 43/126 (34.13%), Postives = 67/126 (53.17%), Query Frame = 0


Query: 20  ELRVSRLQEQLQAERDLRAALEVGLSMSSGQFNNSRGMDLKTRAELEEIALAEADVARLK 79
           E  V RLQEQLQ ERD + ALE GL+MS G       +D   + +L+E+A AEAD+A+L+
Sbjct: 664 EQDVGRLQEQLQQERDRKLALETGLNMSKGNQPIPETIDENLKKDLQEVAQAEADIAKLE 723

Query: 80  QKVAELHHQLNQQRQHNYGSLSDASDRYQHVQNHGSQFFRRRFLQQDFDSTLAFVNHERK 139
            KV +L ++L        GS   AS   + +  H +     +  ++  D+  A  +   +
Sbjct: 724 HKVDDLENRLGHHDGKASGSTHSASKESRKLPEHNA-----KMKEKQKDTEAASTHISER 783

Query: 140 QRSEEG 146
             S++G
Sbjct: 784 STSKDG 784

[Close]

BLAST of Carg25986 vs. Swiss-Prot
Match: sp|Q8RWQ4|RGAP7_ARATH (Rho GTPase-activating protein 7 OS=Arabidopsis thaliana OX=3702 GN=ROPGAP7 PE=2 SV=1)

HSP 1 Score: 218.0 bits (554), Expect = 1.2e-55
Identity = 128/196 (65.31%), Postives = 153/196 (78.06%), Query Frame = 0


Query: 20  ELRVSRLQEQLQAERDLRAALEVGLSMSSGQFNNSRGMDLKTRAELEEIALAEADVARLK 79
           E  VSRLQEQLQAERDLRAALEVGLSMSSGQF +S G+D KTRAELEEIALAEADVARLK
Sbjct: 618 EQDVSRLQEQLQAERDLRAALEVGLSMSSGQF-SSHGVDSKTRAELEEIALAEADVARLK 677

Query: 80  QKVAELHHQLNQQRQHNYGSLSDASDRYQHVQNHGSQFFRRRFLQQDFDSTLAFVNHERK 139
           QKVAELHHQLNQQRQ ++GS SDA D +Q++QNH  Q   +RFLQQDFDSTLA+VNHERK
Sbjct: 678 QKVAELHHQLNQQRQTHFGSFSDARDTHQYLQNHNPQ---KRFLQQDFDSTLAYVNHERK 737

Query: 140 QRSEEGMMGGDWRNIKGQVLGSSNSNKQIPRKLFMDSLSPSDSKSTEVSTSMSVDEL-GV 199
           QR EE ++G +WRN KG       +++Q  RK   +S + +DSK +E S  +SVD+L  +
Sbjct: 738 QRHEENVLGAEWRNSKGAGSFGVGNSRQPSRKQIPESTNTTDSKISEESGKISVDKLSSI 797

Query: 200 DSASFPSTSKAGEVNE 215
           DS S PSTS+  ++ E
Sbjct: 798 DSPSIPSTSRVLDITE 809

[Close]

BLAST of Carg25986 vs. Swiss-Prot
Match: sp|Q9FMP8|RGAP6_ARATH (Rho GTPase-activating protein 6 OS=Arabidopsis thaliana OX=3702 GN=ROPGAP6 PE=2 SV=1)

HSP 1 Score: 166.4 bits (420), Expect = 4.2e-40
Identity = 96/150 (64.00%), Postives = 113/150 (75.33%), Query Frame = 0


Query: 20  ELRVSRLQEQLQAERDLRAALEVGLSMSSGQFNNSRGMDLKTRAELEEIALAEADVARLK 79
           E  V RLQEQLQAERDLR+ALEVGLS+S GQF +S+  D KTRAELEEIALAEADVARLK
Sbjct: 609 EQDVGRLQEQLQAERDLRSALEVGLSISCGQF-SSQAADSKTRAELEEIALAEADVARLK 668

Query: 80  QKVAELHHQLNQQRQHNYGSLSDASDRYQHVQNHGSQFFRRRFLQQDFDSTLAFVNHERK 139
           QKVAELHHQL+QQRQH+  SL DA   +Q + NH +Q    +  QQDFDS LAFVNHER 
Sbjct: 669 QKVAELHHQLSQQRQHHLSSLPDAQSHHQFLHNHNTQL---KSFQQDFDSILAFVNHERN 728

Query: 140 QRSEEGMMGGDWRNIKGQVLGSSNSNKQIP 170
           QR++E  +  DWRN +G       +N+Q+P
Sbjct: 729 QRTDETSLRADWRNGRG-------NNRQVP 747

[Close]

BLAST of Carg25986 vs. Swiss-Prot
Match: sp|F4JQZ3|REN1_ARATH (Rho GTPase-activating protein REN1 OS=Arabidopsis thaliana OX=3702 GN=REN1 PE=1 SV=2)

HSP 1 Score: 61.6 bits (148), Expect = 1.5e-08
Identity = 43/126 (34.13%), Postives = 67/126 (53.17%), Query Frame = 0


Query: 20  ELRVSRLQEQLQAERDLRAALEVGLSMSSGQFNNSRGMDLKTRAELEEIALAEADVARLK 79
           E  V RLQEQLQ ERD + ALE GL+MS G       +D   + +L+E+A AEAD+A+L+
Sbjct: 651 EQDVGRLQEQLQQERDRKLALETGLNMSKGNQPIPETIDENLKKDLQEVAQAEADIAKLE 710

Query: 80  QKVAELHHQLNQQRQHNYGSLSDASDRYQHVQNHGSQFFRRRFLQQDFDSTLAFVNHERK 139
            KV +L ++L        GS   AS   + +  H +     +  ++  D+  A  +   +
Sbjct: 711 HKVDDLENRLGHHDGKASGSTHSASKESRKLPEHNA-----KMKEKQKDTEAASTHISER 770

Query: 140 QRSEEG 146
             S++G
Sbjct: 771 STSKDG 771

[Close]

BLAST of Carg25986 vs. TrEMBL
Match: tr|A0A1S3BNE6|A0A1S3BNE6_CUCME (rho GTPase-activating protein 7 OS=Cucumis melo OX=3656 GN=LOC103491975 PE=4 SV=1)

HSP 1 Score: 321.6 bits (823), Expect = 1.6e-84
Identity = 175/193 (90.67%), Postives = 180/193 (93.26%), Query Frame = 0


Query: 20  ELRVSRLQEQLQAERDLRAALEVGLSMSSGQFNNSRGMDLKTRAELEEIALAEADVARLK 79
           E  VSRLQEQLQAERDLRAALEVGLSMSSGQFNNSRGMD KTRAELEEIALAEADVARLK
Sbjct: 620 EQDVSRLQEQLQAERDLRAALEVGLSMSSGQFNNSRGMDSKTRAELEEIALAEADVARLK 679

Query: 80  QKVAELHHQLNQQRQHNYGSLSDASDRYQHVQNHGSQFFRRRFLQQDFDSTLAFVNHERK 139
           QKVAELHHQLNQQRQHNYGSLSDA DRYQHVQNHGSQ    RFLQQDFDSTLAFVNHERK
Sbjct: 680 QKVAELHHQLNQQRQHNYGSLSDACDRYQHVQNHGSQL---RFLQQDFDSTLAFVNHERK 739

Query: 140 QRSEEGMMGGDWRNIKGQVLGSSNSNKQIPRKLFMDSLSPSDSKSTEVSTSMSVDELGVD 199
           QR+EEG+MG DWRNIKGQVLGS+NSNK  PRKLF+DSLSPSDSKSTEVSTSM+VDEL VD
Sbjct: 740 QRNEEGLMGSDWRNIKGQVLGSANSNKPTPRKLFVDSLSPSDSKSTEVSTSMTVDELAVD 799

Query: 200 SASFPSTSKAGEV 213
           SAS PSTSKAGEV
Sbjct: 800 SASLPSTSKAGEV 809

[Close]

BLAST of Carg25986 vs. TrEMBL
Match: tr|A0A0A0M2Y0|A0A0A0M2Y0_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G629080 PE=4 SV=1)

HSP 1 Score: 319.7 bits (818), Expect = 6.0e-84
Identity = 174/193 (90.16%), Postives = 180/193 (93.26%), Query Frame = 0


Query: 20  ELRVSRLQEQLQAERDLRAALEVGLSMSSGQFNNSRGMDLKTRAELEEIALAEADVARLK 79
           E  VSRLQEQLQAERDLRAALEVGLSMSSGQFNNSRGMD KTRAELEEIALAEADVARLK
Sbjct: 620 EQDVSRLQEQLQAERDLRAALEVGLSMSSGQFNNSRGMDSKTRAELEEIALAEADVARLK 679

Query: 80  QKVAELHHQLNQQRQHNYGSLSDASDRYQHVQNHGSQFFRRRFLQQDFDSTLAFVNHERK 139
           QKVAELHHQLNQQRQHNYGSLSDA DRYQHVQNHGSQ    RFLQQDFDSTLAFVNHERK
Sbjct: 680 QKVAELHHQLNQQRQHNYGSLSDACDRYQHVQNHGSQL---RFLQQDFDSTLAFVNHERK 739

Query: 140 QRSEEGMMGGDWRNIKGQVLGSSNSNKQIPRKLFMDSLSPSDSKSTEVSTSMSVDELGVD 199
           QR+EEG+MG DWRN+KGQVLGS+NS+K  PRKLF+DSLSPSDSKSTEVSTSMSVDEL VD
Sbjct: 740 QRNEEGLMGSDWRNMKGQVLGSANSSKPTPRKLFVDSLSPSDSKSTEVSTSMSVDELAVD 799

Query: 200 SASFPSTSKAGEV 213
           SAS PSTSKAGEV
Sbjct: 800 SASLPSTSKAGEV 809

[Close]

BLAST of Carg25986 vs. TrEMBL
Match: tr|A0A2H5PEY6|A0A2H5PEY6_CITUN (Uncharacterized protein OS=Citrus unshiu OX=55188 GN=CUMW_130420 PE=4 SV=1)

HSP 1 Score: 273.5 bits (698), Expect = 4.9e-70
Identity = 157/211 (74.41%), Postives = 177/211 (83.89%), Query Frame = 0


Query: 20  ELRVSRLQEQLQAERDLRAALEVGLSMSSGQFNNSRGMDLKTRAELEEIALAEADVARLK 79
           E  VSRLQEQLQAERDLRAALEVGLSMSSGQF++SRGMD KTRAELEEIALAEADVARLK
Sbjct: 354 EQDVSRLQEQLQAERDLRAALEVGLSMSSGQFSSSRGMDSKTRAELEEIALAEADVARLK 413

Query: 80  QKVAELHHQLNQQRQHNYGSLSDASDRYQHVQNHGSQFFRRRFLQQDFDSTLAFVNHERK 139
           QKVAELHHQLNQQRQH+YGSLSDA DRYQ+VQNH SQ   +RFLQQDFDSTLAFVNHERK
Sbjct: 414 QKVAELHHQLNQQRQHHYGSLSDACDRYQNVQNHNSQ---QRFLQQDFDSTLAFVNHERK 473

Query: 140 QRSEEGMMGGDWRNIKGQVLGSSNSNKQIPRKLFMDSLSPSDSKSTEVSTSMSVDEL-GV 199
           QR+EE ++G DWRNIKGQ L + +SN+ +PRK F++S S SDSKSTE ST++S+DEL GV
Sbjct: 474 QRTEENLLGADWRNIKGQGLATGSSNR-LPRKQFVESTSLSDSKSTEASTNVSMDELCGV 533

Query: 200 DSASFPSTSKAGEVNESVLSPSHRFGSLKTL 230
           DSAS PSTS+  E  +    PS    +L  L
Sbjct: 534 DSASVPSTSRPIEATDYARHPSTASSALVEL 560

[Close]

BLAST of Carg25986 vs. TrEMBL
Match: tr|V4TGN6|V4TGN6_9ROSI (Uncharacterized protein (Fragment) OS=Citrus clementina OX=85681 GN=CICLE_v100179282mg PE=4 SV=1)

HSP 1 Score: 273.5 bits (698), Expect = 4.9e-70
Identity = 157/211 (74.41%), Postives = 177/211 (83.89%), Query Frame = 0


Query: 20  ELRVSRLQEQLQAERDLRAALEVGLSMSSGQFNNSRGMDLKTRAELEEIALAEADVARLK 79
           E  VSRLQEQLQAERDLRAALEVGLSMSSGQF++SRGMD KTRAELEEIALAEADVARLK
Sbjct: 472 EQDVSRLQEQLQAERDLRAALEVGLSMSSGQFSSSRGMDSKTRAELEEIALAEADVARLK 531

Query: 80  QKVAELHHQLNQQRQHNYGSLSDASDRYQHVQNHGSQFFRRRFLQQDFDSTLAFVNHERK 139
           QKVAELHHQLNQQRQH+YGSLSDA DRYQ+VQNH SQ   +RFLQQDFDSTLAFVNHERK
Sbjct: 532 QKVAELHHQLNQQRQHHYGSLSDACDRYQNVQNHNSQ---QRFLQQDFDSTLAFVNHERK 591

Query: 140 QRSEEGMMGGDWRNIKGQVLGSSNSNKQIPRKLFMDSLSPSDSKSTEVSTSMSVDEL-GV 199
           QR+EE ++G DWRNIKGQ L + +SN+ +PRK F++S S SDSKSTE ST++S+DEL GV
Sbjct: 592 QRTEENLLGADWRNIKGQGLATGSSNR-LPRKQFVESTSLSDSKSTEASTNVSMDELCGV 651

Query: 200 DSASFPSTSKAGEVNESVLSPSHRFGSLKTL 230
           DSAS PSTS+  E  +    PS    +L  L
Sbjct: 652 DSASVPSTSRPIEATDYARHPSTASSALVEL 678

[Close]

BLAST of Carg25986 vs. TrEMBL
Match: tr|A0A1R3J738|A0A1R3J738_COCAP (Ternary complex factor MIP1, leucine-zipper OS=Corchorus capsularis OX=210143 GN=CCACVL1_07325 PE=4 SV=1)

HSP 1 Score: 273.5 bits (698), Expect = 4.9e-70
Identity = 156/211 (73.93%), Postives = 174/211 (82.46%), Query Frame = 0


Query: 20  ELRVSRLQEQLQAERDLRAALEVGLSMSSGQFNNSRGMDLKTRAELEEIALAEADVARLK 79
           E  VSRLQEQLQAERDLRAALEVGLSMSSGQF++SRGMD KTRAELEEIALAEADVARLK
Sbjct: 57  EQDVSRLQEQLQAERDLRAALEVGLSMSSGQFSSSRGMDSKTRAELEEIALAEADVARLK 116

Query: 80  QKVAELHHQLNQQRQHNYGSLSDASDRYQHVQNHGSQFFRRRFLQQDFDSTLAFVNHERK 139
           QKVAELHHQLNQQRQH+YGSLSDA DRYQHVQNH SQ   +RFLQQDFD+TLAF NHERK
Sbjct: 117 QKVAELHHQLNQQRQHHYGSLSDACDRYQHVQNHNSQ---QRFLQQDFDTTLAFCNHERK 176

Query: 140 QRSEEGMMGGDWRNIKGQVLGSSNSNKQIPRKLFMDSLSPSDSKSTEVSTSMSVDEL-GV 199
           QR+EE ++G +WRN+KGQ L   NS++Q  RK FM+S S SDSKSTE S ++S+DEL  V
Sbjct: 177 QRTEENLLGAEWRNVKGQGLAVGNSSRQPTRKQFMESTSLSDSKSTEASANISLDELCAV 236

Query: 200 DSASFPSTSKAGEVNESVLSPSHRFGSLKTL 230
           DSAS PSTS+A EV E    PS    +L  L
Sbjct: 237 DSASIPSTSRAAEVVEYPRHPSAASSALVEL 264

The following BLAST results are available for this feature:

BLAST of Carg25986 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022930042.1	3.4e-91	95.90	rho GTPase-activating protein 7-like [Cucurbita moschata]	[more]
XP_023530617.1	1.0e-90	95.38	rho GTPase-activating protein 7-like [Cucurbita pepo subsp. pepo]	[more]
XP_023004696.1	1.1e-89	94.87	rho GTPase-activating protein 7-like [Cucurbita maxima]	[more]
XP_008450339.1	2.4e-84	90.67	PREDICTED: rho GTPase-activating protein 7 [Cucumis melo]	[more]
XP_004139062.1	9.1e-84	90.16	PREDICTED: rho GTPase-activating protein 7 [Cucumis sativus] >KGN66551.1 hypothe...	[more]

BLAST of Carg25986 vs. TAIR10


Match Name	E-value	Identity	Description
AT5G19390.1	6.8e-57	65.31	Rho GTPase activation protein (RhoGAP) with PH domain	[more]
AT5G12150.1	2.3e-41	64.00	Rho GTPase activation protein (RhoGAP) with PH domain	[more]
AT4G24580.1	8.1e-10	34.13	Rho GTPase activation protein (RhoGAP) with PH domain	[more]

BLAST of Carg25986 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|Q8RWQ4\|RGAP7_ARATH	1.2e-55	65.31	Rho GTPase-activating protein 7 OS=Arabidopsis thaliana OX=3702 GN=ROPGAP7 PE=2 ...	[more]
sp\|Q9FMP8\|RGAP6_ARATH	4.2e-40	64.00	Rho GTPase-activating protein 6 OS=Arabidopsis thaliana OX=3702 GN=ROPGAP6 PE=2 ...	[more]
sp\|F4JQZ3\|REN1_ARATH	1.5e-08	34.13	Rho GTPase-activating protein REN1 OS=Arabidopsis thaliana OX=3702 GN=REN1 PE=1 ...	[more]

BLAST of Carg25986 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A1S3BNE6\|A0A1S3BNE6_CUCME	1.6e-84	90.67	rho GTPase-activating protein 7 OS=Cucumis melo OX=3656 GN=LOC103491975 PE=4 SV=...	[more]
tr\|A0A0A0M2Y0\|A0A0A0M2Y0_CUCSA	6.0e-84	90.16	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G629080 PE=4 SV=1	[more]
tr\|A0A2H5PEY6\|A0A2H5PEY6_CITUN	4.9e-70	74.41	Uncharacterized protein OS=Citrus unshiu OX=55188 GN=CUMW_130420 PE=4 SV=1	[more]
tr\|V4TGN6\|V4TGN6_9ROSI	4.9e-70	74.41	Uncharacterized protein (Fragment) OS=Citrus clementina OX=85681 GN=CICLE_v10017...	[more]
tr\|A0A1R3J738\|A0A1R3J738_COCAP	4.9e-70	73.93	Ternary complex factor MIP1, leucine-zipper OS=Corchorus capsularis OX=210143 GN...	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR025757	MIP1_Leuzipper

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg25986-RA	Carg25986-RA	mRNA

InterPro

Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 61..95
IPR025757	Ternary complex factor MIP1, leucine-zipper	PFAM	PF14389	Lzipper-MIP1	coord: 22..92 e-value: 1.4E-16 score: 60.4

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Carg25986	CsaV3_1G043460	Cucumber (Chinese Long) v3	carcucB0928

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Carg25986	Silver-seed gourd	carcarB640
Carg25986	Cucumber (Gy14) v2	carcgybB0878
Carg25986	Cucumber (Gy14) v1	carcgyB1010
Carg25986	Cucurbita maxima (Rimu)	carcmaB1230
Carg25986	Cucurbita maxima (Rimu)	carcmaB1231
Carg25986	Cucurbita moschata (Rifu)	carcmoB1200
Carg25986	Cucurbita moschata (Rifu)	carcmoB1201
Carg25986	Cucurbita pepo (Zucchini)	carcpeB1239
Carg25986	Cucurbita pepo (Zucchini)	carcpeB1240
Carg25986	Wild cucumber (PI 183967)	carcpiB0925
Carg25986	Cucumber (Chinese Long) v2	carcuB0905
Carg25986	Bottle gourd (USVL1VR-Ls)	carlsiB807
Carg25986	Melon (DHL92) v3.5.1	carmeB0876
Carg25986	Melon (DHL92) v3.6.1	carmedB0884
Carg25986	Watermelon (Charleston Gray)	carwcgB0864
Carg25986	Watermelon (97103) v1	carwmB0892
Carg25986	Watermelon (97103) v2	carwmbB0928
Carg25986	Wax gourd	carwgoB1035