Carg25979 (gene) Silver-seed gourd
The following sequences are available for this feature:
Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGGAGCAGATGATTGAAGGTGATAAGCCAAATCCAGCGCCATTTTTGACCAAAACCTATGATTTGGTGGATGATCCTCGCACTGATCATGTTGTTTCTTGGGGCCAATCTCATTCCACCTTTGTTGTTTGGAGCCCTCCTGAGTTTGCTACTCATGTTCTTCCCAACTACTTCAAACACAACAATTTCTCTAGCTTTGTTCGTCAACTCAACACTTACGTACGTATCTGCCTCGTTCTCTTGTTCTTGTTCTCGTTCTTGTTCTTGTTCTCTGTCTTTGAGAGAGTTTGAACTTATGGTTTATGGAGAAGGATAGTTCTCGTGTATAATTAACCATCTGGGTCTAGGCCGACTTCCTCTCATGGGATTCTTTAGCCTAAAGGGATGCATGAGATGTTTTCAATCTAGATAGAATTTAAACCTCGGGTCCATGAATGAGACGTCAGTGTCCAATCATTACGAACTATGCTTAGATTAGCTTTTTTTTTTTATCGGATTTGAACCTACAAGAGACCGTAGCATTTAATCGTCATCTAACTAGCTAGAGAGATTCGTTATGAGATTCAAACTTACTAACGCTCGAGAGCAGATATCAATGTCCAAACAGTTGAGTTTATGCTTGGTATAGCGTTATATATTGTTTGACGTTTTTTTCAATCCTTAGAACAAATGAAGCCAAAAACGATTTGATTGACGTTTTTTTCAAAGTAGAATTCAAACCCATGATTCGTTAATGTTAATCGATTACGCTATGCTCGAGTTAGTGAATAATTTGATTGTGATTGACAGGGATTCAAGAAAGTAGTAGCAGAGAGATGGGAATTTGGGAACGAAAACTTCAAGAAAGGAGAGAAACAATTACTCTCACAGATTCACAGAAGAAAATCTCATAATTACAATAATAATAATAATAACAATCTCCAATTCTTCCATGTACACGGCGAGCTCTTCACCGCCACTTCCTCCTCCGATTCCGACGTGCTGGCGGCGCTGATGCAAGACAACCGGCGTCTACGACGGAGGAACTTCATGCTGCTATCGGAGCTGACCCAGATGAAGAATCTCTACTCGGACATCATATACTTCATCCAAAACCACGTGAAGCCATTTGATCAGAGAAACGGGAAATGGGTGGCGAAGTTGGTGGAGTTGGAGGCTCCGCCGCCGCAAGTAGCGGTGGCTAAGGCGGCGGGGGAATCAGAAGAGGTGAAGCTATTTGGGGTTCCGATTAGAGGGAAGAAGAGAGGAGCTTCAGATGAAGAGGATAGAGTTTGA ATGGAGCAGATGATTGAAGGTGATAAGCCAAATCCAGCGCCATTTTTGACCAAAACCTATGATTTGGTGGATGATCCTCGCACTGATCATGTTGTTTCTTGGGGCCAATCTCATTCCACCTTTGTTGTTTGGAGCCCTCCTGAGTTTGCTACTCATGTTCTTCCCAACTACTTCAAACACAACAATTTCTCTAGCTTTGTTCGTCAACTCAACACTTACGGATTCAAGAAAGTAGTAGCAGAGAGATGGGAATTTGGGAACGAAAACTTCAAGAAAGGAGAGAAACAATTACTCTCACAGATTCACAGAAGAAAATCTCATAATTACAATAATAATAATAATAACAATCTCCAATTCTTCCATGTACACGGCGAGCTCTTCACCGCCACTTCCTCCTCCGATTCCGACGTGCTGGCGGCGCTGATGCAAGACAACCGGCGTCTACGACGGAGGAACTTCATGCTGCTATCGGAGCTGACCCAGATGAAGAATCTCTACTCGGACATCATATACTTCATCCAAAACCACGTGAAGCCATTTGATCAGAGAAACGGGAAATGGGTGGCGAAGTTGGTGGAGTTGGAGGCTCCGCCGCCGCAAGTAGCGGTGGCTAAGGCGGCGGGGGAATCAGAAGAGGTGAAGCTATTTGGGGTTCCGATTAGAGGGAAGAAGAGAGGAGCTTCAGATGAAGAGGATAGAGTTTGA ATGGAGCAGATGATTGAAGGTGATAAGCCAAATCCAGCGCCATTTTTGACCAAAACCTATGATTTGGTGGATGATCCTCGCACTGATCATGTTGTTTCTTGGGGCCAATCTCATTCCACCTTTGTTGTTTGGAGCCCTCCTGAGTTTGCTACTCATGTTCTTCCCAACTACTTCAAACACAACAATTTCTCTAGCTTTGTTCGTCAACTCAACACTTACGGATTCAAGAAAGTAGTAGCAGAGAGATGGGAATTTGGGAACGAAAACTTCAAGAAAGGAGAGAAACAATTACTCTCACAGATTCACAGAAGAAAATCTCATAATTACAATAATAATAATAATAACAATCTCCAATTCTTCCATGTACACGGCGAGCTCTTCACCGCCACTTCCTCCTCCGATTCCGACGTGCTGGCGGCGCTGATGCAAGACAACCGGCGTCTACGACGGAGGAACTTCATGCTGCTATCGGAGCTGACCCAGATGAAGAATCTCTACTCGGACATCATATACTTCATCCAAAACCACGTGAAGCCATTTGATCAGAGAAACGGGAAATGGGTGGCGAAGTTGGTGGAGTTGGAGGCTCCGCCGCCGCAAGTAGCGGTGGCTAAGGCGGCGGGGGAATCAGAAGAGGTGAAGCTATTTGGGGTTCCGATTAGAGGGAAGAAGAGAGGAGCTTCAGATGAAGAGGATAGAGTTTGA MEQMIEGDKPNPAPFLTKTYDLVDDPRTDHVVSWGQSHSTFVVWSPPEFATHVLPNYFKHNNFSSFVRQLNTYGFKKVVAERWEFGNENFKKGEKQLLSQIHRRKSHNYNNNNNNNLQFFHVHGELFTATSSSDSDVLAALMQDNRRLRRRNFMLLSELTQMKNLYSDIIYFIQNHVKPFDQRNGKWVAKLVELEAPPPQVAVAKAAGESEEVKLFGVPIRGKKRGASDEEDRV
BLAST of Carg25979 vs. NCBI nr
Match: XP_022925361.1 (heat stress transcription factor B-4b-like [Cucurbita moschata]) HSP 1 Score: 392.1 bits (1006), Expect = 1.3e-105 Identity = 230/234 (98.29%), Postives = 231/234 (98.72%), Query Frame = 0
BLAST of Carg25979 vs. NCBI nr
Match: XP_023531680.1 (heat stress transcription factor B-4b-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 389.4 bits (999), Expect = 8.5e-105 Identity = 224/236 (94.92%), Postives = 225/236 (95.34%), Query Frame = 0
BLAST of Carg25979 vs. NCBI nr
Match: XP_022974122.1 (heat stress transcription factor B-4b-like [Cucurbita maxima]) HSP 1 Score: 384.0 bits (985), Expect = 3.6e-103 Identity = 217/236 (91.95%), Postives = 218/236 (92.37%), Query Frame = 0
BLAST of Carg25979 vs. NCBI nr
Match: XP_022153268.1 (heat stress transcription factor B-4b-like [Momordica charantia]) HSP 1 Score: 270.8 bits (691), Expect = 4.4e-69 Identity = 150/251 (59.76%), Postives = 165/251 (65.74%), Query Frame = 0
BLAST of Carg25979 vs. NCBI nr
Match: XP_022988196.1 (heat stress transcription factor B-4b-like [Cucurbita maxima]) HSP 1 Score: 265.4 bits (677), Expect = 1.8e-67 Identity = 173/231 (74.89%), Postives = 191/231 (82.68%), Query Frame = 0
BLAST of Carg25979 vs. TAIR10
Match: AT1G46264.1 (heat shock transcription factor B4) HSP 1 Score: 193.7 bits (491), Expect = 1.2e-49 Identity = 123/215 (57.21%), Postives = 139/215 (64.65%), Query Frame = 0
BLAST of Carg25979 vs. TAIR10
Match: AT5G62020.1 (heat shock transcription factor B2A) HSP 1 Score: 142.9 bits (359), Expect = 2.5e-34 Identity = 126/262 (48.09%), Postives = 163/262 (62.21%), Query Frame = 0
BLAST of Carg25979 vs. TAIR10
Match: AT4G17750.1 (heat shock factor 1) HSP 1 Score: 141.4 bits (355), Expect = 7.3e-34 Identity = 60/93 (64.52%), Postives = 76/93 (81.72%), Query Frame = 0
BLAST of Carg25979 vs. TAIR10
Match: AT3G22830.1 (heat shock transcription factor A6B) HSP 1 Score: 139.8 bits (351), Expect = 2.1e-33 Identity = 63/102 (61.76%), Postives = 79/102 (77.45%), Query Frame = 0
BLAST of Carg25979 vs. TAIR10
Match: AT4G11660.1 (winged-helix DNA-binding transcription factor family protein) HSP 1 Score: 139.4 bits (350), Expect = 2.8e-33 Identity = 62/93 (66.67%), Postives = 73/93 (78.49%), Query Frame = 0
BLAST of Carg25979 vs. Swiss-Prot
Match: sp|Q9C635|HSFB4_ARATH (Heat stress transcription factor B-4 OS=Arabidopsis thaliana OX=3702 GN=HSFB4 PE=2 SV=1) HSP 1 Score: 193.7 bits (491), Expect = 2.2e-48 Identity = 123/215 (57.21%), Postives = 139/215 (64.65%), Query Frame = 0
BLAST of Carg25979 vs. Swiss-Prot
Match: sp|Q67U94|HFB4C_ORYSJ (Heat stress transcription factor B-4c OS=Oryza sativa subsp. japonica OX=39947 GN=HSFB4C PE=2 SV=1) HSP 1 Score: 176.0 bits (445), Expect = 4.8e-43 Identity = 118/232 (50.86%), Postives = 130/232 (56.03%), Query Frame = 0
BLAST of Carg25979 vs. Swiss-Prot
Match: sp|Q6Z9R8|HFB4A_ORYSJ (Putative heat stress transcription factor B-4a OS=Oryza sativa subsp. japonica OX=39947 GN=HSFB4A PE=3 SV=1) HSP 1 Score: 171.0 bits (432), Expect = 1.6e-41 Identity = 102/225 (45.33%), Postives = 115/225 (51.11%), Query Frame = 0
BLAST of Carg25979 vs. Swiss-Prot
Match: sp|Q7XHZ0|HFB4B_ORYSJ (Heat stress transcription factor B-4b OS=Oryza sativa subsp. japonica OX=39947 GN=HSFB4B PE=1 SV=1) HSP 1 Score: 163.7 bits (413), Expect = 2.5e-39 Identity = 72/94 (76.60%), Postives = 82/94 (87.23%), Query Frame = 0
BLAST of Carg25979 vs. Swiss-Prot
Match: sp|Q10KX8|HFB4D_ORYSJ (Heat stress transcription factor B-4d OS=Oryza sativa subsp. japonica OX=39947 GN=HSFB4D PE=3 SV=1) HSP 1 Score: 161.8 bits (408), Expect = 9.4e-39 Identity = 72/93 (77.42%), Postives = 81/93 (87.10%), Query Frame = 0
BLAST of Carg25979 vs. TrEMBL
Match: tr|A0A0A0M2Y7|A0A0A0M2Y7_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G629180 PE=3 SV=1) HSP 1 Score: 257.7 bits (657), Expect = 2.5e-65 Identity = 173/235 (73.62%), Postives = 191/235 (81.28%), Query Frame = 0
BLAST of Carg25979 vs. TrEMBL
Match: tr|A0A1S3BPZ9|A0A1S3BPZ9_CUCME (heat stress transcription factor B-4b-like OS=Cucumis melo OX=3656 GN=LOC103491968 PE=3 SV=1) HSP 1 Score: 256.1 bits (653), Expect = 7.4e-65 Identity = 170/235 (72.34%), Postives = 190/235 (80.85%), Query Frame = 0
BLAST of Carg25979 vs. TrEMBL
Match: tr|G7KCV7|G7KCV7_MEDTR (Heat shock transcription factor OS=Medicago truncatula OX=3880 GN=11432338 PE=3 SV=1) HSP 1 Score: 238.4 bits (607), Expect = 1.6e-59 Identity = 131/233 (56.22%), Postives = 150/233 (64.38%), Query Frame = 0
BLAST of Carg25979 vs. TrEMBL
Match: tr|A0A151U1R7|A0A151U1R7_CAJCA (Heat stress transcription factor B-4b OS=Cajanus cajan OX=3821 GN=KK1_005852 PE=3 SV=1) HSP 1 Score: 234.2 bits (596), Expect = 3.0e-58 Identity = 135/250 (54.00%), Postives = 153/250 (61.20%), Query Frame = 0
BLAST of Carg25979 vs. TrEMBL
Match: tr|A0A2K3LMR4|A0A2K3LMR4_TRIPR (Heat stress transcription factor b-4-like protein OS=Trifolium pratense OX=57577 GN=L195_g018776 PE=3 SV=1) HSP 1 Score: 233.8 bits (595), Expect = 3.9e-58 Identity = 132/239 (55.23%), Postives = 151/239 (63.18%), Query Frame = 0
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07
The following gene(s) are orthologous to this gene: The following gene(s) are paralogous to this gene:
The following block(s) are covering this gene:
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