Carg25850 (gene) Silver-seed gourd

Overview
NameCarg25850
Typegene
OrganismCucurbita argyrosperma (Silver-seed gourd)
DescriptionB3 domain-containing protein REM16-like
LocationCucurbita_argyrosperma_scaffold_356 : 165952 .. 169757 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
AACTCCACTGTACTCTGAAGAAAAGCTCATCGATTTTCAAGAATGGCCTTGAAACGGGCATCTCCATTACCTTTTTCTCCGTCAGTGACTTGTCGCATTAGAACAATAACTTGGGCTTCGGCTCTACTTTTCTGCTTGTTGTCCAAGCATCCGATTGCGGCGGATCCATCTTCCTTCAAATCTGGAAATTCAACCGCGGCTTCGAAATCGGCAATCGGCGGCTGCATCCATCTTGTTCTGCCGCCAAATCCGCCGGTAAGTTAGGGCACTCACTTACTTTCTAGATCTAGATTCTTGTTTGTTTTGGGTATGTTTTGTTACTTGGATCATATTGATGGACTTGCTCTCTGAATGGATTTCAGATTGCATTTCGATCTTCTAGTTGTTAATTTATTGTGTTTCTAGCCGTACAAATGGATAAAGTAAGCGATAGCTCCAACAAATGGGCAGAAGATATCTATTGGAGCCATTTTCAGTTCACCCACTTCTATCAAATTCTTGCCGGTGGTAGTGAACAGAAACTTGTAGGTTTTCTTTTTCTGCTCTTTCCTTTTGTATTTTCAAATTCTGGGTTCTGCATTTGATGTTTGATTATGATTAGACATTAGATTTTGGTTTTGATCCTCACAAGCTTGTAGCAGAGACTCTGTTCATTAGATTTTGTTGTGTTTTTTTCTATTGTATGCTGTTTGTTTCCTCATCCATGGAGTTAATGTTTGAAGAACTCAGCGTTTTTCCCAAGTGTTCTGAGCTTATGGATTTTTGTGATAGATGATTTACGATTTGGATTTAAACACTTATTCTAACAGCCCAAGCCACTGCTAACAATTATTGTCCGCTTTGGCCCATTACGTTTGTAAGTCTCACGGGTTTAAAACGCGTCTGTTAAAGGAGAAGTTTCTACACCCTTGTAAGGAATGTTTCGTTCCACTCTCCAACCAATGTAAGATCTCACAACCCACACCCCCCTTGGGAGCCCAGCGTCCTTGTAGTGTTCTGACTCTAGTACTATTTGTAACAGCGCAAGCCCACCACTCACAAGATATTGTCTGCATTGGTCCGATACGCTGTCAGCCTCATGGTTTTGAAACGTGTCTGCTAGGGAGAGGTTTCTACATCCTTATAATGAATGTTTCGTTCCCTTCTCCAATGTGGATCTCATACTTGCTCTAATAGAACTAGTTTACTTTCTATGATCATCTATTTCTTTGACCGGAAAATTGCATCAAAATTTCACTTGCAAGCTTTTCTAGGATTTGGGAGTGAATTCCATTTGTTTCCTCATTGTTTAGATGTAAACGATGTTGGAGACTATTTATTTGAGAATTAAGTTCATACAAATTTCATGTTTAAGTATTTCTGCTGTCGTGTTCTTATTCCGTAATGCCTTTCAATGATGAGCTTAAATGATCTCTGCAAATTGTGACTTTATAGCATTGTTGGATCATTTGTACCTTAGGTTAGGAATGGTATGATATTGTCCACTTTGAGCATAAGCTCTAATGACTTTGCTTTTGGTTTTTCCAACAGGCCTCATACTTAGAGATCGTATTCCTTACTTATAAACTCATGATCAACCCCTTAATTAGTCATTGTGGGACTTTCTCTCCCAAGAATTCTCAATAATTCTCCCCTCGAACAAAGTATACCATAGAGCCTCCTCTGAGGCCCATGGAGCCCTCGAGCAGCCTCCCTTTAATCGAGGCTCAACTCTTTTCTCTGGAGCCCTCGAACAAAGTACACCCTCTATTCAACATTTGAGTCACTTTTTTACCACACATTCGAGGCTCACAATTCTTTGTTCGATACTTGAGGATTCTGTTGACATGGCTAAGTTAAGGGCATGGCTCTGATACCATGCTAGTAACCACAACTCTCCACAATGGTATGATATTGTCCACTTTGAGCATAAGCTCTCATGGTTTTGCTTTTGGTTTTTTCAAAAGTACTCATACCAATGGAGATAGTGTTTCATACTTATAAACCCACGATCTTTTCCTTAATTAGTTGATGTGGGACTCCTCTCCCAACAATCGTCAATACCTTACCGCCTACAGTTGCCCCATTCATACAGTTCATGTTTAAAGCACACACCATCTTCCTAAGGTGTTCTAAGCTTATGGGGTTTTAGACAATTGATGATTTACTATTTGGATACAAACACTCACTCCATTAGAACTGATCTCTTTGCTATGATCATCTATTTCTTTGATCTGAAAATTGCATCATAGTTTCTCTTACAAACTTTTCTAGAATCTTGGCAACTCATTTATATATATTATCTGAGCTGCAGGTACTTCCAAACAAATTTGCAAACAATTTGAAAAAGAAACTTCCATCAACTGTGACTCTTAAAGGTCCTAGTGGTGCCACATGGGATGTGGGATTGTCTGCCAATGATGATAAATTGTATTTCAAACACGGCTGGCAAGAGTTTGTGAAGGCTCATTCTCTGGAGCAGAATGATCTTTTAGTTTTTAGGTACAATGGAGCGTCGCAGTTTGACGTTTTAGTATTTGATTGGAAGAGCTTTTGTGAGAAGGAAGCCTCATATTTCGTAAAAATCTGTGAGCATAAAAATAGCGACACTGGACACAAGGCTAAGAGGAAGTTTGGCGAACCCACTTTAGATAGTTTTGATGTTGATGCTAACAATGGTGCTGAATGCGCTTCGTCTGAAAATAATATGCACGATGACAGTATGGAACGTATGATACAGGACGTCGTGTCCAAAGCTACAAATTTGAATGGTCAACCTGAGGTTTTTTCAGCTCAGCCTATACGAACAATACGTACTAGAAGAAGGAAAGAAACTCCAAAAAGTGCAGCAGTTATGACACCCACCCCTGCTCCGGTTCAGTTATCAGGTAGTTGGAGAAGAACTGCTTAAGTTTTTAATCCTTGATTCATGTCTCCCTGTTTTCTTGGTGATTCCTAAGTTGTTATCATCGAGCTTCGTTATACTAGCACGATACGTTTCCAATCTTGACTAGGAAAGCATTTTTGTAATGATTGTGTAGTCAGGACTCAATCTATTTAATGTTTATGGATCAATCTGGTATCTGACATTGAACTTTGCTAGATTCCGACGAGGAAGCTACTCCTGTTAAGAAAACCGGGTCATATGCCGAGCAATACCTATCCAATCGTAGGGCTATTACGGAAGAGGACAAGAACAATGCCCTGAAGTTGGCAGAAGCAGCATCAAGCAATGCTGGTTTCAAAGTTATCATGCGACCTTCACATGTATACAGGAGATTCTACCTGGTAAAACTTGTATTCTGTTGCTGATCTTTTAGTTTCTCCTTGAACTTTCTTTCAACGCCCAATCTATGATTTCCATGAGATCTTCTGAAGTGAACTGTGAAATGAATGTGTGAATTCCTTAGTATTAGGAAAGTTGGGCAATCCCTTTGTTGACTGTATGTTAAGTTCGTCGATTTTTTTAGTTCTTATATGCATATCACACGGCACGTTGGTTGATGATGCAGTTTATCCCCACTCAATGGGTTACGAAAAATCTCTCCCTTTGCAACCAAGACGTAATACTGCGTCTCGGAAACGACGAATGGCCAGCCAAATTCAACTTTACCGCAAGTCGTCAATGCGGTGGCCTTACAAGTGGATGGAAACATTTCGCTATAGATAACAATTTAGAAGAATTCGACGTCTGCCTCTTTGAGCCTGTCCCTATAACAAGTGGTCCTGTGGTCCTGGAGGTCAAAATCTTCCGTGTTGTCGAAGATGTTATCCCTCTTACTCGTGTGTCGGCTAAGAGCAACAGGAAGCTAATCAAAGCCAACTAA

mRNA sequence

AACTCCACTGTACTCTGAAGAAAAGCTCATCGATTTTCAAGAATGGCCTTGAAACGGGCATCTCCATTACCTTTTTCTCCGTCAGTGACTTGTCGCATTAGAACAATAACTTGGGCTTCGGCTCTACTTTTCTGCTTGTTGTCCAAGCATCCGATTGCGGCGGATCCATCTTCCTTCAAATCTGGAAATTCAACCGCGGCTTCGAAATCGGCAATCGGCGGCTGCATCCATCTTGTTCTGCCGCCAAATCCGCCGGTAAATTGCATTTCGATCTTCTAGTTGTTAATTTATTGTGTTTCTAGCCGTACAAATGGATAAAGTAAGCGATAGCTCCAACAAATGGGCAGAAGATATCTATTGGAGCCATTTTCAGTTCACCCACTTCTATCAAATTCTTGCCGGTGGTAGTGAACAGAAACTTGTACTTCCAAACAAATTTGCAAACAATTTGAAAAAGAAACTTCCATCAACTGTGACTCTTAAAGGTCCTAGTGGTGCCACATGGGATGTGGGATTGTCTGCCAATGATGATAAATTGTATTTCAAACACGGCTGGCAAGAGTTTGTGAAGGCTCATTCTCTGGAGCAGAATGATCTTTTAGTTTTTAGGTACAATGGAGCGTCGCAGTTTGACGTTTTAGTATTTGATTGGAAGAGCTTTTGTGAGAAGGAAGCCTCATATTTCGTAAAAATCTGTGAGCATAAAAATAGCGACACTGGACACAAGGCTAAGAGGAAGTTTGGCGAACCCACTTTAGATAGTTTTGATGTTGATGCTAACAATGGTGCTGAATGCGCTTCGTCTGAAAATAATATGCACGATGACAGTATGGAACGTATGATACAGGACGTCGTGTCCAAAGCTACAAATTTGAATGGTCAACCTGAGGTTTTTTCAGCTCAGCCTATACGAACAATACGTACTAGAAGAAGGAAAGAAACTCCAAAAAGTGCAGCAGTTATGACACCCACCCCTGCTCCGGTTCAGTTATCAGATTCCGACGAGGAAGCTACTCCTGTTAAGAAAACCGGGTCATATGCCGAGCAATACCTATCCAATCGTAGGGCTATTACGGAAGAGGACAAGAACAATGCCCTGAAGTTGGCAGAAGCAGCATCAAGCAATGCTGGTTTCAAAGTTATCATGCGACCTTCACATGTATACAGGAGATTCTACCTGTTTATCCCCACTCAATGGGTTACGAAAAATCTCTCCCTTTGCAACCAAGACGTAATACTGCGTCTCGGAAACGACGAATGGCCAGCCAAATTCAACTTTACCGCAAGTCGTCAATGCGGTGGCCTTACAAGTGGATGGAAACATTTCGCTATAGATAACAATTTAGAAGAATTCGACGTCTGCCTCTTTGAGCCTGTCCCTATAACAAGTGGTCCTGTGGTCCTGGAGGTCAAAATCTTCCGTGTTGTCGAAGATGTTATCCCTCTTACTCGTGTGTCGGCTAAGAGCAACAGGAAGCTAATCAAAGCCAACTAA

Coding sequence (CDS)

ATGGATAAAGTAAGCGATAGCTCCAACAAATGGGCAGAAGATATCTATTGGAGCCATTTTCAGTTCACCCACTTCTATCAAATTCTTGCCGGTGGTAGTGAACAGAAACTTGTACTTCCAAACAAATTTGCAAACAATTTGAAAAAGAAACTTCCATCAACTGTGACTCTTAAAGGTCCTAGTGGTGCCACATGGGATGTGGGATTGTCTGCCAATGATGATAAATTGTATTTCAAACACGGCTGGCAAGAGTTTGTGAAGGCTCATTCTCTGGAGCAGAATGATCTTTTAGTTTTTAGGTACAATGGAGCGTCGCAGTTTGACGTTTTAGTATTTGATTGGAAGAGCTTTTGTGAGAAGGAAGCCTCATATTTCGTAAAAATCTGTGAGCATAAAAATAGCGACACTGGACACAAGGCTAAGAGGAAGTTTGGCGAACCCACTTTAGATAGTTTTGATGTTGATGCTAACAATGGTGCTGAATGCGCTTCGTCTGAAAATAATATGCACGATGACAGTATGGAACGTATGATACAGGACGTCGTGTCCAAAGCTACAAATTTGAATGGTCAACCTGAGGTTTTTTCAGCTCAGCCTATACGAACAATACGTACTAGAAGAAGGAAAGAAACTCCAAAAAGTGCAGCAGTTATGACACCCACCCCTGCTCCGGTTCAGTTATCAGATTCCGACGAGGAAGCTACTCCTGTTAAGAAAACCGGGTCATATGCCGAGCAATACCTATCCAATCGTAGGGCTATTACGGAAGAGGACAAGAACAATGCCCTGAAGTTGGCAGAAGCAGCATCAAGCAATGCTGGTTTCAAAGTTATCATGCGACCTTCACATGTATACAGGAGATTCTACCTGTTTATCCCCACTCAATGGGTTACGAAAAATCTCTCCCTTTGCAACCAAGACGTAATACTGCGTCTCGGAAACGACGAATGGCCAGCCAAATTCAACTTTACCGCAAGTCGTCAATGCGGTGGCCTTACAAGTGGATGGAAACATTTCGCTATAGATAACAATTTAGAAGAATTCGACGTCTGCCTCTTTGAGCCTGTCCCTATAACAAGTGGTCCTGTGGTCCTGGAGGTCAAAATCTTCCGTGTTGTCGAAGATGTTATCCCTCTTACTCGTGTGTCGGCTAAGAGCAACAGGAAGCTAATCAAAGCCAACTAA

Protein sequence

MDKVSDSSNKWAEDIYWSHFQFTHFYQILAGGSEQKLVLPNKFANNLKKKLPSTVTLKGPSGATWDVGLSANDDKLYFKHGWQEFVKAHSLEQNDLLVFRYNGASQFDVLVFDWKSFCEKEASYFVKICEHKNSDTGHKAKRKFGEPTLDSFDVDANNGAECASSENNMHDDSMERMIQDVVSKATNLNGQPEVFSAQPIRTIRTRRRKETPKSAAVMTPTPAPVQLSDSDEEATPVKKTGSYAEQYLSNRRAITEEDKNNALKLAEAASSNAGFKVIMRPSHVYRRFYLFIPTQWVTKNLSLCNQDVILRLGNDEWPAKFNFTASRQCGGLTSGWKHFAIDNNLEEFDVCLFEPVPITSGPVVLEVKIFRVVEDVIPLTRVSAKSNRKLIKAN
Homology
[Close]
BLAST of Carg25850 vs. NCBI nr
Match: XP_022951820.1 (B3 domain-containing protein REM16-like [Cucurbita moschata] >XP_022951821.1 B3 domain-containing protein REM16-like [Cucurbita moschata])

HSP 1 Score: 797.3 bits (2058), Expect = 2.3e-227
Identity = 392/394 (99.49%), Postives = 394/394 (100.00%), Query Frame = 0 

Query: 1   MDKVSDSSNKWAEDIYWSHFQFTHFYQILAGGSEQKLVLPNKFANNLKKKLPSTVTLKGP 60
           MDKVSDSSNKWAEDIYWSHFQFTHFYQILAGGSEQKLVLPNKFANNLKKKLPSTVTLKGP
Sbjct: 1   MDKVSDSSNKWAEDIYWSHFQFTHFYQILAGGSEQKLVLPNKFANNLKKKLPSTVTLKGP 60

Query: 61  SGATWDVGLSANDDKLYFKHGWQEFVKAHSLEQNDLLVFRYNGASQFDVLVFDWKSFCEK 120
           SGATWDVGLSANDDKLYFKHGWQEFV+AHSLEQNDLLVFRYNGASQFDVLVFDWKSFCEK
Sbjct: 61  SGATWDVGLSANDDKLYFKHGWQEFVRAHSLEQNDLLVFRYNGASQFDVLVFDWKSFCEK 120

Query: 121 EASYFVKICEHKNSDTGHKAKRKFGEPTLDSFDVDANNGAECASSENNMHDDSMERMIQD 180
           EASYFVKICEHKNSDTGHKAKRKFGEPTLDSFDVDANNGAECASSENNMHDDSMERMIQD
Sbjct: 121 EASYFVKICEHKNSDTGHKAKRKFGEPTLDSFDVDANNGAECASSENNMHDDSMERMIQD 180

Query: 181 VVSKATNLNGQPEVFSAQPIRTIRTRRRKETPKSAAVMTPTPAPVQLSDSDEEATPVKKT 240
           VVSKATNLNGQPEVFSAQPIRTIRTRRRKETPKSAAVMTPTPAPVQLSDSDEEATPVKKT
Sbjct: 181 VVSKATNLNGQPEVFSAQPIRTIRTRRRKETPKSAAVMTPTPAPVQLSDSDEEATPVKKT 240

Query: 241 GSYAEQYLSNRRAITEEDKNNALKLAEAASSNAGFKVIMRPSHVYRRFYLFIPTQWVTKN 300
           GSYAEQYLSNRRAITEEDKNNALKLAEAASSNAGFKVIMRPSHVYRRFYLFIPTQWVTKN
Sbjct: 241 GSYAEQYLSNRRAITEEDKNNALKLAEAASSNAGFKVIMRPSHVYRRFYLFIPTQWVTKN 300

Query: 301 LSLCNQDVILRLGNDEWPAKFNFTASRQCGGLTSGWKHFAIDNNLEEFDVCLFEPVPITS 360
           LSLCNQDVILRLGNDEWPAKFNFTASRQCGGLTSGWKHFAIDNNLEEFDVC+FEPVPITS
Sbjct: 301 LSLCNQDVILRLGNDEWPAKFNFTASRQCGGLTSGWKHFAIDNNLEEFDVCVFEPVPITS 360

Query: 361 GPVVLEVKIFRVVEDVIPLTRVSAKSNRKLIKAN 395
           GPVVLEVKIFRVVEDVIPLTRVSAKSNRKLIKAN
Sbjct: 361 GPVVLEVKIFRVVEDVIPLTRVSAKSNRKLIKAN 394

[Close]
BLAST of Carg25850 vs. NCBI nr
Match: XP_023538425.1 (B3 domain-containing protein REM16-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 783.5 bits (2022), Expect = 3.4e-223
Identity = 385/394 (97.72%), Postives = 390/394 (98.98%), Query Frame = 0 

Query: 1   MDKVSDSSNKWAEDIYWSHFQFTHFYQILAGGSEQKLVLPNKFANNLKKKLPSTVTLKGP 60
           MDKVSDSSNKWAEDIYWSHFQFTHFYQILAGGSEQKLVLPNKF NNLKKKLPSTVTLKGP
Sbjct: 1   MDKVSDSSNKWAEDIYWSHFQFTHFYQILAGGSEQKLVLPNKFVNNLKKKLPSTVTLKGP 60

Query: 61  SGATWDVGLSANDDKLYFKHGWQEFVKAHSLEQNDLLVFRYNGASQFDVLVFDWKSFCEK 120
           SGATWDVGLSANDDKLYFKHGWQEFVKAHSLEQNDLLVFRYNGASQFDVLVFDWKSFCEK
Sbjct: 61  SGATWDVGLSANDDKLYFKHGWQEFVKAHSLEQNDLLVFRYNGASQFDVLVFDWKSFCEK 120

Query: 121 EASYFVKICEHKNSDTGHKAKRKFGEPTLDSFDVDANNGAECASSENNMHDDSMERMIQD 180
           EASYFVKICEH NSDTGHKAKRKFGEPTLDSFDVDANNGAECASSENN+HDDSMERMIQD
Sbjct: 121 EASYFVKICEHTNSDTGHKAKRKFGEPTLDSFDVDANNGAECASSENNLHDDSMERMIQD 180

Query: 181 VVSKATNLNGQPEVFSAQPIRTIRTRRRKETPKSAAVMTPTPAPVQLSDSDEEATPVKKT 240
           VVSKATNLNGQPEVFSAQPIRTIRTRRRKETPKSAAVMTPTPAPVQLSDSDEEATPVKK 
Sbjct: 181 VVSKATNLNGQPEVFSAQPIRTIRTRRRKETPKSAAVMTPTPAPVQLSDSDEEATPVKKI 240

Query: 241 GSYAEQYLSNRRAITEEDKNNALKLAEAASSNAGFKVIMRPSHVYRRFYLFIPTQWVTKN 300
           GSYAEQYLSNRRAITEEDKNNALKLAEAASSNAGFKVIMRPSHVYRRFYLFIPTQWVTKN
Sbjct: 241 GSYAEQYLSNRRAITEEDKNNALKLAEAASSNAGFKVIMRPSHVYRRFYLFIPTQWVTKN 300

Query: 301 LSLCNQDVILRLGNDEWPAKFNFTASRQCGGLTSGWKHFAIDNNLEEFDVCLFEPVPITS 360
           LSLCNQDVILRLGN+EWPAKF+FTASRQCGGLTSGWKHFAIDNNLEEFDVC+FEPVP TS
Sbjct: 301 LSLCNQDVILRLGNNEWPAKFSFTASRQCGGLTSGWKHFAIDNNLEEFDVCVFEPVPKTS 360

Query: 361 GPVVLEVKIFRVVEDVIPLTRVSAKSNRKLIKAN 395
           GPVVLEV+IFRVVEDVIPLTRVSAKSNRKLIKAN
Sbjct: 361 GPVVLEVRIFRVVEDVIPLTRVSAKSNRKLIKAN 394

[Close]
BLAST of Carg25850 vs. NCBI nr
Match: XP_023002000.1 (B3 domain-containing protein REM16-like [Cucurbita maxima] >XP_023002001.1 B3 domain-containing protein REM16-like [Cucurbita maxima])

HSP 1 Score: 782.3 bits (2019), Expect = 7.6e-223
Identity = 385/394 (97.72%), Postives = 389/394 (98.73%), Query Frame = 0 

Query: 1   MDKVSDSSNKWAEDIYWSHFQFTHFYQILAGGSEQKLVLPNKFANNLKKKLPSTVTLKGP 60
           MDKVSDSSNKWAEDIYWSHFQFTHFYQILAGGSEQKLVLPNKFANNLKKKLPSTVTLKGP
Sbjct: 1   MDKVSDSSNKWAEDIYWSHFQFTHFYQILAGGSEQKLVLPNKFANNLKKKLPSTVTLKGP 60

Query: 61  SGATWDVGLSANDDKLYFKHGWQEFVKAHSLEQNDLLVFRYNGASQFDVLVFDWKSFCEK 120
           SGATWDVGLSANDDKLYFKHGWQEFVKAHSLEQNDLLVFRYNGASQFDVLVFDWKSFCEK
Sbjct: 61  SGATWDVGLSANDDKLYFKHGWQEFVKAHSLEQNDLLVFRYNGASQFDVLVFDWKSFCEK 120

Query: 121 EASYFVKICEHKNSDTGHKAKRKFGEPTLDSFDVDANNGAECASSENNMHDDSMERMIQD 180
           EASYFVKICEH NSDTGHKAKRKFGEPTLDSFDV ANNGAECASSENN+HDDSMERMIQD
Sbjct: 121 EASYFVKICEHTNSDTGHKAKRKFGEPTLDSFDVAANNGAECASSENNLHDDSMERMIQD 180

Query: 181 VVSKATNLNGQPEVFSAQPIRTIRTRRRKETPKSAAVMTPTPAPVQLSDSDEEATPVKKT 240
           VVSKATNLNGQPEVFSAQPIRTIRTRRRKETPKSAAVMTPTPAPVQLSDSDEEATPVKKT
Sbjct: 181 VVSKATNLNGQPEVFSAQPIRTIRTRRRKETPKSAAVMTPTPAPVQLSDSDEEATPVKKT 240

Query: 241 GSYAEQYLSNRRAITEEDKNNALKLAEAASSNAGFKVIMRPSHVYRRFYLFIPTQWVTKN 300
           GSYAEQY+SNRRAITEEDKNNALKLAEAASSNAGFKVIMRPSHVYRRFYLFIPTQWVTKN
Sbjct: 241 GSYAEQYVSNRRAITEEDKNNALKLAEAASSNAGFKVIMRPSHVYRRFYLFIPTQWVTKN 300

Query: 301 LSLCNQDVILRLGNDEWPAKFNFTASRQCGGLTSGWKHFAIDNNLEEFDVCLFEPVPITS 360
           LSLCNQDVIL LGNDEWPAKF+FTASRQCGGLTSGWKHFAIDNNLEEFDVC+FEPVP TS
Sbjct: 301 LSLCNQDVILHLGNDEWPAKFSFTASRQCGGLTSGWKHFAIDNNLEEFDVCVFEPVPKTS 360

Query: 361 GPVVLEVKIFRVVEDVIPLTRVSAKSNRKLIKAN 395
           GPVVLEVKIFRVVEDVIPLTRVSAK NRKLIKAN
Sbjct: 361 GPVVLEVKIFRVVEDVIPLTRVSAKCNRKLIKAN 394

[Close]
BLAST of Carg25850 vs. NCBI nr
Match: XP_022144339.1 (B3 domain-containing protein REM16 [Momordica charantia])

HSP 1 Score: 676.0 bits (1743), Expect = 7.6e-191
Identity = 328/394 (83.25%), Postives = 359/394 (91.12%), Query Frame = 0 

Query: 1   MDKVSDSSNKWAEDIYWSHFQFTHFYQILAGGSEQKLVLPNKFANNLKKKLPSTVTLKGP 60
           MDK  D S+KWAEDIYW+HFQFTHFYQILAGG EQ+LV+PNKFANNLKKKLPSTVTLKGP
Sbjct: 1   MDKACDGSSKWAEDIYWTHFQFTHFYQILAGGCEQQLVIPNKFANNLKKKLPSTVTLKGP 60

Query: 61  SGATWDVGLSANDDKLYFKHGWQEFVKAHSLEQNDLLVFRYNGASQFDVLVFDWKSFCEK 120
           SGATWDVGL++ND+KLYFKHGWQ+FVKAHSLEQNDLL+FRYNG SQFDVLVFDWKSFCEK
Sbjct: 61  SGATWDVGLTSNDNKLYFKHGWQDFVKAHSLEQNDLLIFRYNGGSQFDVLVFDWKSFCEK 120

Query: 121 EASYFVKICEHKNSDTGHKAKRKFGEPTLDSFDVDANNGAECASSENNMHDDSMERMIQD 180
           EASYFVKICEHK  D G++AKRK  EP+LD FD D NNGAECASSEN +HDDSMERMIQD
Sbjct: 121 EASYFVKICEHKKGDDGYQAKRKLREPSLDDFDADTNNGAECASSENIIHDDSMERMIQD 180

Query: 181 VVSKATNLNGQPEVFSAQPIRTIRTRRRKETPKSAAVMTPTPAPVQLSDSDEEATPVKKT 240
           VVSKATNLNGQPEV SA+PI+T+RTRR+KETP +A ++  TP P+Q+SDSD  ATP+KK 
Sbjct: 181 VVSKATNLNGQPEVCSAEPIQTMRTRRKKETPNNATIL--TPPPIQISDSDVAATPIKKI 240

Query: 241 GSYAEQYLSNRRAITEEDKNNALKLAEAASSNAGFKVIMRPSHVYRRFYLFIPTQWVTKN 300
           GSYAE Y+SNRRAITE+DK NALKLAEAASS+  FKV+MRPSHVYRRF+LFIPTQWVTKN
Sbjct: 241 GSYAEHYVSNRRAITEDDKINALKLAEAASSDGSFKVVMRPSHVYRRFFLFIPTQWVTKN 300

Query: 301 LSLCNQDVILRLGNDEWPAKFNFTASRQCGGLTSGWKHFAIDNNLEEFDVCLFEPVPITS 360
           LSL NQDVILR GNDEWP KFNFT SRQCGGLTSGWKHFAIDNNLEE+DVC+FEPV  TS
Sbjct: 301 LSLRNQDVILRFGNDEWPTKFNFTQSRQCGGLTSGWKHFAIDNNLEEYDVCVFEPVVKTS 360

Query: 361 GPVVLEVKIFRVVEDVIPLTRV-SAKSNRKLIKA 394
           GPVVLEVKIFRVVED IPLTRV S+KSNRKLIKA
Sbjct: 361 GPVVLEVKIFRVVEDAIPLTRVSSSKSNRKLIKA 392

[Close]
BLAST of Carg25850 vs. NCBI nr
Match: XP_004152721.1 (PREDICTED: B3 domain-containing protein REM16-like [Cucumis sativus] >KGN62556.1 hypothetical protein Csa_2G360730 [Cucumis sativus])

HSP 1 Score: 667.9 bits (1722), Expect = 2.1e-188
Identity = 321/393 (81.68%), Postives = 359/393 (91.35%), Query Frame = 0 

Query: 1   MDKVSDSSNKWAEDIYWSHFQFTHFYQILAGGSEQKLVLPNKFANNLKKKLPSTVTLKGP 60
           MDKV DSSNKWAEDIYWSHFQFTHFYQILAGG EQ+LV+PNKF+NNL+ KLP TVTLKGP
Sbjct: 1   MDKVGDSSNKWAEDIYWSHFQFTHFYQILAGGCEQQLVIPNKFSNNLRNKLPDTVTLKGP 60

Query: 61  SGATWDVGLSANDDKLYFKHGWQEFVKAHSLEQNDLLVFRYNGASQFDVLVFDWKSFCEK 120
           SGATWDVGL+++DDKLYFK GWQEFVKAHSLEQNDLLVFRYNG SQFDVL+FDWKSFCEK
Sbjct: 61  SGATWDVGLTSSDDKLYFKRGWQEFVKAHSLEQNDLLVFRYNGMSQFDVLIFDWKSFCEK 120

Query: 121 EASYFVKICEHKNSDTGHKAKRKFGEPTLDSFDVDANNGAECASSENNMHDDSMERMIQD 180
           EASYFVKICE+K  D+G +AKRKF EP+LD FD + NNGAEC SSEN +HDDSMERMIQD
Sbjct: 121 EASYFVKICENKKIDSGGQAKRKFREPSLDGFDANINNGAECDSSENIIHDDSMERMIQD 180

Query: 181 VVSKATNLNGQPEVFSAQPIRTIRTRRRKETPKSAAVMTPTPAPVQLSDSDEEATPVKKT 240
           VVSKATN NGQPEVFSA+PIRT++TRR+K+TP   A+++ TP PVQLSDSD EATP+KK 
Sbjct: 181 VVSKATNFNGQPEVFSAEPIRTVQTRRKKKTPNKTAIIS-TPDPVQLSDSDVEATPIKKI 240

Query: 241 GSYAEQYLSNRRAITEEDKNNALKLAEAASSNAGFKVIMRPSHVYRRFYLFIPTQWVTKN 300
           GSY EQY+S+RRAITE +KNNALKLAEAASS+ GFKV+MRPSHVYRRF+LFIPTQWVTKN
Sbjct: 241 GSYVEQYVSHRRAITEGEKNNALKLAEAASSDTGFKVVMRPSHVYRRFFLFIPTQWVTKN 300

Query: 301 LSLCNQDVILRLGNDEWPAKFNFTASRQCGGLTSGWKHFAIDNNLEEFDVCLFEPVPITS 360
           LSL NQD+ILR+G+DEWP KFNFT SRQCGGLTSGWKHF++DNNLEEFDVC+FEPV  +S
Sbjct: 301 LSLRNQDIILRVGSDEWPTKFNFTPSRQCGGLTSGWKHFSVDNNLEEFDVCVFEPVNKSS 360

Query: 361 GPVVLEVKIFRVVEDVIPLTRVSAKSNRKLIKA 394
           GPVVLEVKIFRVVEDVIPLTRV++K NRK  KA
Sbjct: 361 GPVVLEVKIFRVVEDVIPLTRVASKGNRKPTKA 392

[Close]
BLAST of Carg25850 vs. TAIR10
Match: AT4G33280.1 (AP2/B3-like transcriptional factor family protein)

HSP 1 Score: 229.9 bits (585), Expect = 2.6e-60
Identity = 136/376 (36.17%), Postives = 198/376 (52.66%), Query Frame = 0 

Query: 1   MDKVSDSSNKWAEDIYWSHFQFTHFYQILAGGSEQKLVLPNKFANNLKKKLPSTVTLKGP 60
           M++  +   KW E++YW+HFQ  HF Q+L  G   +LV+P KF+ + K+KLP  VTLK P
Sbjct: 1   MEENCEDCMKWEEELYWTHFQTLHFTQLLLPGFHNRLVIPRKFSTHCKRKLPQIVTLKSP 60

Query: 61  SGATWDVGLSANDDK-LYFKHGWQEFVKAHSLEQNDLLVFRYNGASQFDVLVFDWKSFCE 120
           SG T++VG+  +D+K + F+ GW +FVK HSLE+NDLLVF+++G S+F+VLVFD ++ CE
Sbjct: 61  SGVTYNVGVEEDDEKTMAFRFGWDKFVKDHSLEENDLLVFKFHGVSEFEVLVFDGQTLCE 120

Query: 121 KEASYFVKICEHKNSDTGHKAKRKFGEPTLDSFDVDANNGAECASSENNMHDDSMERMIQ 180
           K  SYFV+ C       GH  K K                A     E   H         
Sbjct: 121 KPTSYFVRKC-------GHAEKTK----------------ASHTGYEQEEH--------- 180

Query: 181 DVVSKATNLNGQPEVFSAQPIRTIRTRRRKETPKSAAVMTPTPAPVQLSDSDEEATPVKK 240
                   +N   +  SAQ                  V++PT + V++S+     +  KK
Sbjct: 181 --------INSDIDTASAQ----------------LPVISPT-STVRVSEGKYPLSGFKK 240

Query: 241 TGSYAEQYLSNRRA----ITEEDKNNALKLAEAASSNAGFKVIMRPSHVYRRFYLFIPTQ 300
                     +++A    I+      AL LA+ A S  GF V M+ SHV  + +L IP +
Sbjct: 241 MRRELSNDNLDQKADVEMISAGSNKKALSLAKRAISPDGFLVFMKRSHVVSKCFLTIPYK 300

Query: 301 WVTKNLSLCNQDVILRLGNDEWPAKFNFTASRQCGGLTSGWKHFAIDNNLEEFDVCLFEP 360
           W  KN+ +  Q+V++++   +W  KFN   +R  GG+++GWK F  DNNL E DVC+FEP
Sbjct: 301 WCVKNMLITRQEVVMQVDQTKWEMKFNIFGARGSGGISTGWKKFVQDNNLREGDVCVFEP 319

Query: 361 VPITSGPVVLEVKIFR 372
               + P+ L V IFR
Sbjct: 361 ANSETKPLHLNVYIFR 319

[Close]
BLAST of Carg25850 vs. TAIR10
Match: AT3G18990.1 (AP2/B3-like transcriptional factor family protein)

HSP 1 Score: 127.1 bits (318), Expect = 2.4e-29
Identity = 101/360 (28.06%), Postives = 169/360 (46.94%), Query Frame = 0 

Query: 34  EQKLVLPNKFANNLKKKLPSTVTLKGPSGATWDVGLSANDDKLYFKHGWQEFVKAHSLEQ 93
           E++L +P+KF +  K +L   V L  P G  W VGL   D+K++F+ GWQEFV  +S+  
Sbjct: 17  EKRLRVPDKFVSKFKDELSVAVALTVPDGHVWRVGLRKADNKIWFQDGWQEFVDRYSIRI 76

Query: 94  NDLLVFRYNGASQFDVLVFDWKSFCEKEASYFVKICEHKNSDTGHKAKRKFGEPTLDSFD 153
             LL+FRY G S F V +F   +    E +Y           TG           +DS  
Sbjct: 77  GYLLIFRYEGNSAFSVYIF---NLSHSEINY---------HSTG----------LMDS-- 136

Query: 154 VDANNGAECASSENNMHDDSMERMIQDVVSKA---TNLNGQPEVFSAQPIRTIRTRRRKE 213
             A+N  + A    ++ D+  E +    V  +    +     + +++  I+T+ T     
Sbjct: 137 --AHNHFKRARLFEDLEDEDAEVIFPSSVYPSPLPESTVPANKGYASSAIQTLFT----- 196

Query: 214 TPKSAAVMTPTPA-------------PVQLSDSDEEATPVKKTGSYAEQYLSNRRAITEE 273
            P  A   TPTP              P +++ S       +    + E   + +R +T E
Sbjct: 197 GPVKAEEPTPTPKIPKKRGRKKKNADPEEINSSAPRDDDPENRSKFYESASARKRTVTAE 256

Query: 274 DKNNALKLAEA-ASSNAGFKVIMRPSHVYRRFYLFIPTQWVTKNLSLCNQDVILRLGNDE 333
           ++  A+  A+    +N  F+V++RPS++YR   +++P+ +  K LS  +  + ++L   +
Sbjct: 257 ERERAINAAKTFEPTNPFFRVVLRPSYLYRGCIMYLPSGFAEKYLSGISGFIKVQLAEKQ 316

Query: 334 WPAKFNFTASRQCGGLTSGWKHFAIDNNLEEFDVCLFEPVPITSGPVVLEVKIFRVVEDV 377
           WP +  + A R     + GW  F ++NNL E DVC+FE   + +   VL+V  FRV E V
Sbjct: 317 WPVRCLYKAGR--AKFSQGWYEFTLENNLGEGDVCVFE--LLRTRDFVLKVTAFRVNEYV 341

[Close]
BLAST of Carg25850 vs. TAIR10
Match: AT1G49480.1 (related to vernalization1 1)

HSP 1 Score: 82.0 bits (201), Expect = 8.8e-16
Identity = 52/174 (29.89%), Postives = 90/174 (51.72%), Query Frame = 0 

Query: 207 RRKETP---KSAAVMTPTPAPVQLSDSDEEATPVKKTGSYAEQYLSNRRAITEEDKNNAL 266
           + +ETP   K        P P +++ S       +    + E   + +R +T E++  A+
Sbjct: 57  KAEETPKVLKKRGRKKKNPNPEEVNSSTPGGDDSENRSKFYESASARKRTVTAEERERAV 116

Query: 267 KLAEA-ASSNAGFKVIMRPSHVYRRFYLFIPTQWVTKNLSLCNQDVILRLGNDEWPAKFN 326
             A+    +N  F+V++RPS++YR   +++P+ +  K LS  +  + L+LG  +WP +  
Sbjct: 117 NAAKTFEPTNPYFRVVLRPSYLYRGCIMYLPSGFAEKYLSGISGFIKLQLGEKQWPVRCL 176

Query: 327 FTASRQCGGLTSGWKHFAIDNNLEEFDVCLFEPVPITSGPVVLEVKIFRVVEDV 377
           + A R     + GW  F ++NN+ E DVC+FE   + +   VLEV  FRV E V
Sbjct: 177 YKAGR--AKFSQGWYEFTLENNIGEGDVCVFE--LLRTRDFVLEVTAFRVNEYV 226

[Close]
BLAST of Carg25850 vs. TAIR10
Match: AT4G34400.1 (AP2/B3-like transcriptional factor family protein)

HSP 1 Score: 75.9 bits (185), Expect = 6.3e-14
Identity = 31/88 (35.23%), Postives = 51/88 (57.95%), Query Frame = 0 

Query: 33  SEQKLVLPNKFANNLKKKLPSTVTLKGPSGATWDVGLSANDDKLYFKHGWQEFVKAHSLE 92
           S + +V+P  + +++  + P TV L+GP G +W V     DD++ F  GW +FV+ ++L 
Sbjct: 25  SSEFMVIPVSYYDHIPHRFPKTVILRGPGGCSWKVATEIKDDEVLFSQGWPKFVRDNTLN 84

Query: 93  QNDLLVFRYNGASQFDVLVFDWKSFCEK 121
             D L F YNGA  F+V +F     C++
Sbjct: 85  DGDFLTFAYNGAHIFEVSIFRGYDACKE 112

[Close]
BLAST of Carg25850 vs. TAIR10
Match: AT3G06160.2 (AP2/B3-like transcriptional factor family protein)

HSP 1 Score: 64.7 bits (156), Expect = 1.5e-10
Identity = 26/88 (29.55%), Postives = 49/88 (55.68%), Query Frame = 0 

Query: 25  FYQILAGGSEQKLVLPNKFANNLKKKLPSTVTLKGPSGATWDVGLSANDDKLYFKHGWQE 84
           F   L+  S + +V+P  + N L + LP T  L G  G  W V +++  +++YF+ GW  
Sbjct: 70  FTVFLSHCSSESMVIPRSYYNLLPRPLPKTAILIGTGGRFWKVAMTSKQEQVYFEQGWGN 129

Query: 85  FVKAHSLEQNDLLVFRYNGASQFDVLVF 113
           FV  + L++ + L F ++G   ++V ++
Sbjct: 130 FVADNQLKEGEFLTFVFDGHKSYEVSIY 157

[Close]
BLAST of Carg25850 vs. Swiss-Prot
Match: sp|Q8RYD1|REM16_ARATH (B3 domain-containing protein REM16 OS=Arabidopsis thaliana OX=3702 GN=REM16 PE=2 SV=1)

HSP 1 Score: 229.9 bits (585), Expect = 4.7e-59
Identity = 136/376 (36.17%), Postives = 198/376 (52.66%), Query Frame = 0 

Query: 1   MDKVSDSSNKWAEDIYWSHFQFTHFYQILAGGSEQKLVLPNKFANNLKKKLPSTVTLKGP 60
           M++  +   KW E++YW+HFQ  HF Q+L  G   +LV+P KF+ + K+KLP  VTLK P
Sbjct: 1   MEENCEDCMKWEEELYWTHFQTLHFTQLLLPGFHNRLVIPRKFSTHCKRKLPQIVTLKSP 60

Query: 61  SGATWDVGLSANDDK-LYFKHGWQEFVKAHSLEQNDLLVFRYNGASQFDVLVFDWKSFCE 120
           SG T++VG+  +D+K + F+ GW +FVK HSLE+NDLLVF+++G S+F+VLVFD ++ CE
Sbjct: 61  SGVTYNVGVEEDDEKTMAFRFGWDKFVKDHSLEENDLLVFKFHGVSEFEVLVFDGQTLCE 120

Query: 121 KEASYFVKICEHKNSDTGHKAKRKFGEPTLDSFDVDANNGAECASSENNMHDDSMERMIQ 180
           K  SYFV+ C       GH  K K                A     E   H         
Sbjct: 121 KPTSYFVRKC-------GHAEKTK----------------ASHTGYEQEEH--------- 180

Query: 181 DVVSKATNLNGQPEVFSAQPIRTIRTRRRKETPKSAAVMTPTPAPVQLSDSDEEATPVKK 240
                   +N   +  SAQ                  V++PT + V++S+     +  KK
Sbjct: 181 --------INSDIDTASAQ----------------LPVISPT-STVRVSEGKYPLSGFKK 240

Query: 241 TGSYAEQYLSNRRA----ITEEDKNNALKLAEAASSNAGFKVIMRPSHVYRRFYLFIPTQ 300
                     +++A    I+      AL LA+ A S  GF V M+ SHV  + +L IP +
Sbjct: 241 MRRELSNDNLDQKADVEMISAGSNKKALSLAKRAISPDGFLVFMKRSHVVSKCFLTIPYK 300

Query: 301 WVTKNLSLCNQDVILRLGNDEWPAKFNFTASRQCGGLTSGWKHFAIDNNLEEFDVCLFEP 360
           W  KN+ +  Q+V++++   +W  KFN   +R  GG+++GWK F  DNNL E DVC+FEP
Sbjct: 301 WCVKNMLITRQEVVMQVDQTKWEMKFNIFGARGSGGISTGWKKFVQDNNLREGDVCVFEP 319

Query: 361 VPITSGPVVLEVKIFR 372
               + P+ L V IFR
Sbjct: 361 ANSETKPLHLNVYIFR 319

[Close]
BLAST of Carg25850 vs. Swiss-Prot
Match: sp|Q8L3W1|VRN1_ARATH (B3 domain-containing transcription factor VRN1 OS=Arabidopsis thaliana OX=3702 GN=VRN1 PE=1 SV=1)

HSP 1 Score: 127.1 bits (318), Expect = 4.3e-28
Identity = 101/360 (28.06%), Postives = 169/360 (46.94%), Query Frame = 0 

Query: 34  EQKLVLPNKFANNLKKKLPSTVTLKGPSGATWDVGLSANDDKLYFKHGWQEFVKAHSLEQ 93
           E++L +P+KF +  K +L   V L  P G  W VGL   D+K++F+ GWQEFV  +S+  
Sbjct: 17  EKRLRVPDKFVSKFKDELSVAVALTVPDGHVWRVGLRKADNKIWFQDGWQEFVDRYSIRI 76

Query: 94  NDLLVFRYNGASQFDVLVFDWKSFCEKEASYFVKICEHKNSDTGHKAKRKFGEPTLDSFD 153
             LL+FRY G S F V +F   +    E +Y           TG           +DS  
Sbjct: 77  GYLLIFRYEGNSAFSVYIF---NLSHSEINY---------HSTG----------LMDS-- 136

Query: 154 VDANNGAECASSENNMHDDSMERMIQDVVSKA---TNLNGQPEVFSAQPIRTIRTRRRKE 213
             A+N  + A    ++ D+  E +    V  +    +     + +++  I+T+ T     
Sbjct: 137 --AHNHFKRARLFEDLEDEDAEVIFPSSVYPSPLPESTVPANKGYASSAIQTLFT----- 196

Query: 214 TPKSAAVMTPTPA-------------PVQLSDSDEEATPVKKTGSYAEQYLSNRRAITEE 273
            P  A   TPTP              P +++ S       +    + E   + +R +T E
Sbjct: 197 GPVKAEEPTPTPKIPKKRGRKKKNADPEEINSSAPRDDDPENRSKFYESASARKRTVTAE 256

Query: 274 DKNNALKLAEA-ASSNAGFKVIMRPSHVYRRFYLFIPTQWVTKNLSLCNQDVILRLGNDE 333
           ++  A+  A+    +N  F+V++RPS++YR   +++P+ +  K LS  +  + ++L   +
Sbjct: 257 ERERAINAAKTFEPTNPFFRVVLRPSYLYRGCIMYLPSGFAEKYLSGISGFIKVQLAEKQ 316

Query: 334 WPAKFNFTASRQCGGLTSGWKHFAIDNNLEEFDVCLFEPVPITSGPVVLEVKIFRVVEDV 377
           WP +  + A R     + GW  F ++NNL E DVC+FE   + +   VL+V  FRV E V
Sbjct: 317 WPVRCLYKAGR--AKFSQGWYEFTLENNLGEGDVCVFE--LLRTRDFVLKVTAFRVNEYV 341

[Close]
BLAST of Carg25850 vs. Swiss-Prot
Match: sp|Q2QMT5|Y1209_ORYSJ (B3 domain-containing protein LOC_Os12g40090 OS=Oryza sativa subsp. japonica OX=39947 GN=Os12g0591500 PE=2 SV=1)

HSP 1 Score: 116.7 bits (291), Expect = 5.8e-25
Identity = 90/341 (26.39%), Postives = 145/341 (42.52%), Query Frame = 0 

Query: 25  FYQILAGGSEQKLVLPNKFANNLKKKLPSTVTLKGPSGATWDVGLSANDDKLYFKHGWQE 84
           F++++ G     + +P K A     ++     LK PSG TW VG++   D+L  K GW++
Sbjct: 8   FFRLMTGDFAHGISIPEKVAEIFSGQITKGFNLKSPSGETWRVGVAKVADELILKSGWED 67

Query: 85  FVKAHSLEQNDLLVF----RYNGASQFDVLVFDWKSFCEKEASYFV-----KICEHKNSD 144
           F KAH L++NDLL F      NG+  FDVL+FD  S CEK + +F       +C++ NS 
Sbjct: 68  FAKAHELQENDLLFFTCNGHGNGSCSFDVLIFD-ASGCEKVSCFFTGKKNSYMCKNFNSI 127

Query: 145 TGHKAKRKFGEPTLDSFDVDANNGAECASSENNMHDDSMERMIQDVVSKATNLNGQPEVF 204
            G  A +     + D+       G+         H  S  + +       TN   +PE  
Sbjct: 128 GGQVAGQYLSSDSEDTSTPSVLIGSP--------HKASTSKKLSG--KTKTNPRKEPEDP 187

Query: 205 SAQPIRTIRTRRRKETPKSAAVMTPTPAPVQLSDSDEEATPVKKTGSYAEQYLSNRRAIT 264
           +      I  +                     +D DE A            Y      +T
Sbjct: 188 NCSHWHVIEEKN--------------------TDDDEHAD---------YHYTRFANYLT 247

Query: 265 EEDKNNALKLAEAASSNAGFKVIMRPSHVYRRFYLFIPTQWVTKNLSLCNQDVILRLGN- 324
            E+++    L      N  F V+++ +HV RR  L +PT++   +L   + D++L   N 
Sbjct: 248 GEERDEIFSLVSLQPGNPVFVVVLQTAHVRRRNILIVPTRFAADHLERKSHDILLIRPNR 307

Query: 325 -DEWPAKFNFTASRQCGGLTSGWKHFAIDNNLEEFDVCLFE 355
             +W  K+ + ++   G     W  F  +N L E +VC+FE
Sbjct: 308 KQKWSVKYYYLSNTTRGFNCHRWIKFIRENRLREGNVCIFE 308

[Close]
BLAST of Carg25850 vs. Swiss-Prot
Match: sp|Q10GM3|Y3222_ORYSJ (B3 domain-containing protein Os03g0622200 OS=Oryza sativa subsp. japonica OX=39947 GN=Os03g0622200 PE=2 SV=1)

HSP 1 Score: 116.7 bits (291), Expect = 5.8e-25
Identity = 95/361 (26.32%), Postives = 153/361 (42.38%), Query Frame = 0 

Query: 10  KWAEDIYWSHF--QFTHFYQILAGGSEQKLVLPNKFANNLKKKLPSTVTLKGPSGATWDV 69
           +W E  YWSH      HF + + G   + + +P +FANN    +   V L+ PSG TW +
Sbjct: 15  EWQEHCYWSHMADHSKHFLKHMVGDFTESMTVPARFANNFNGHISEEVNLRSPSGETWSI 74

Query: 70  GLSAND-DKLYFKHGWQEFVKAHSLEQNDLLVFRYNG-ASQFDVLVFDWKSFCEKEASYF 129
           G++ +D  +L  + GW+EFV  + +E+ D L+FRY+G +S FDVL+FD  S CEK + +F
Sbjct: 75  GVANSDAGELVLQPGWKEFVDGNGIEEGDCLLFRYSGVSSSFDVLIFD-PSGCEKASPHF 134

Query: 130 VKICEHKNSDTGHKAKRKFGEPTLDSFDVDANNGAECASSENNMHDDSMERMIQDVVSKA 189
           V       ++    A++           VD +NG          H   +E          
Sbjct: 135 VGSHGFGRAENSAGAEQGGRNGRRTPPIVDGDNG----------HRHHLE---------- 194

Query: 190 TNLNGQPEVFSAQPIRTIRTRRRKETPKSA--AVMTPTPAPVQLSDSDEEATPVKKTGSY 249
                           T+     +  P++   ++ +      +    DE+     + G Y
Sbjct: 195 ---------------MTLHRNSCRSIPRACKRSLFSDETEAKENDGEDEDVVAAAEGGRY 254

Query: 250 AEQYLSNRRAIT-----EEDKNNALKL-AEAASSNAGFKVIMRPSHVYRRFYLF--IPTQ 309
            E Y S    +      EED+    ++       N  F  ++  SHV    Y    +  +
Sbjct: 255 GEYYFSRHGRVAEYNLREEDREEISRVPVPVQPGNPVFVQVIHSSHVRSSKYCIVGVSPE 314

Query: 310 WVTKNLSLCNQDVILRLGN--DEWPAKFNFTASRQCGGLTSGWKHFAIDNNLEEFDVCLF 355
           +  K L    ++V+L   +   EW   F    + + G   +GW+ FA DN L   DVCLF
Sbjct: 315 FAGKYLGAVEREVVLERASRGGEWHVPFVHRQNTR-GFYGAGWRQFAGDNRLVAHDVCLF 338

[Close]
BLAST of Carg25850 vs. Swiss-Prot
Match: sp|Q10GM4|Y3221_ORYSJ (B3 domain-containing protein Os03g0622100 OS=Oryza sativa subsp. japonica OX=39947 GN=Os03g0622100 PE=2 SV=1)

HSP 1 Score: 111.7 bits (278), Expect = 1.9e-23
Identity = 51/121 (42.15%), Postives = 77/121 (63.64%), Query Frame = 0 

Query: 10  KWAEDIYWSHF--QFTHFYQILAGGSEQKLVLPNKFANNLKKKLPSTVTLKGPSGATWDV 69
           +W E  YWSH      HF   + G   + +++P++FANN    +   V LK PSG TW +
Sbjct: 15  EWQEHCYWSHMADDCKHFLTYMVGDFTESMIVPSRFANNFNGHISEVVNLKSPSGKTWSI 74

Query: 70  GLSAND-DKLYFKHGWQEFVKAHSLEQNDLLVFRYNGASQFDVLVFDWKSFCEKEASYFV 128
           G++ +D  +L  + GW+EFV A+ +++ND L+FRY+G S FDVL+FD  S CEK + +FV
Sbjct: 75  GVAYSDTGELVLRSGWKEFVDANGVQENDCLLFRYSGVSSFDVLIFD-PSGCEKASPHFV 134

[Close]
BLAST of Carg25850 vs. TrEMBL
Match: tr|A0A0A0LRE7|A0A0A0LRE7_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G360730 PE=4 SV=1)

HSP 1 Score: 667.9 bits (1722), Expect = 1.4e-188
Identity = 321/393 (81.68%), Postives = 359/393 (91.35%), Query Frame = 0 

Query: 1   MDKVSDSSNKWAEDIYWSHFQFTHFYQILAGGSEQKLVLPNKFANNLKKKLPSTVTLKGP 60
           MDKV DSSNKWAEDIYWSHFQFTHFYQILAGG EQ+LV+PNKF+NNL+ KLP TVTLKGP
Sbjct: 1   MDKVGDSSNKWAEDIYWSHFQFTHFYQILAGGCEQQLVIPNKFSNNLRNKLPDTVTLKGP 60

Query: 61  SGATWDVGLSANDDKLYFKHGWQEFVKAHSLEQNDLLVFRYNGASQFDVLVFDWKSFCEK 120
           SGATWDVGL+++DDKLYFK GWQEFVKAHSLEQNDLLVFRYNG SQFDVL+FDWKSFCEK
Sbjct: 61  SGATWDVGLTSSDDKLYFKRGWQEFVKAHSLEQNDLLVFRYNGMSQFDVLIFDWKSFCEK 120

Query: 121 EASYFVKICEHKNSDTGHKAKRKFGEPTLDSFDVDANNGAECASSENNMHDDSMERMIQD 180
           EASYFVKICE+K  D+G +AKRKF EP+LD FD + NNGAEC SSEN +HDDSMERMIQD
Sbjct: 121 EASYFVKICENKKIDSGGQAKRKFREPSLDGFDANINNGAECDSSENIIHDDSMERMIQD 180

Query: 181 VVSKATNLNGQPEVFSAQPIRTIRTRRRKETPKSAAVMTPTPAPVQLSDSDEEATPVKKT 240
           VVSKATN NGQPEVFSA+PIRT++TRR+K+TP   A+++ TP PVQLSDSD EATP+KK 
Sbjct: 181 VVSKATNFNGQPEVFSAEPIRTVQTRRKKKTPNKTAIIS-TPDPVQLSDSDVEATPIKKI 240

Query: 241 GSYAEQYLSNRRAITEEDKNNALKLAEAASSNAGFKVIMRPSHVYRRFYLFIPTQWVTKN 300
           GSY EQY+S+RRAITE +KNNALKLAEAASS+ GFKV+MRPSHVYRRF+LFIPTQWVTKN
Sbjct: 241 GSYVEQYVSHRRAITEGEKNNALKLAEAASSDTGFKVVMRPSHVYRRFFLFIPTQWVTKN 300

Query: 301 LSLCNQDVILRLGNDEWPAKFNFTASRQCGGLTSGWKHFAIDNNLEEFDVCLFEPVPITS 360
           LSL NQD+ILR+G+DEWP KFNFT SRQCGGLTSGWKHF++DNNLEEFDVC+FEPV  +S
Sbjct: 301 LSLRNQDIILRVGSDEWPTKFNFTPSRQCGGLTSGWKHFSVDNNLEEFDVCVFEPVNKSS 360

Query: 361 GPVVLEVKIFRVVEDVIPLTRVSAKSNRKLIKA 394
           GPVVLEVKIFRVVEDVIPLTRV++K NRK  KA
Sbjct: 361 GPVVLEVKIFRVVEDVIPLTRVASKGNRKPTKA 392

[Close]
BLAST of Carg25850 vs. TrEMBL
Match: tr|A0A1S3BAT7|A0A1S3BAT7_CUCME (B3 domain-containing protein REM16-like OS=Cucumis melo OX=3656 GN=LOC103487931 PE=4 SV=1)

HSP 1 Score: 665.2 bits (1715), Expect = 8.9e-188
Identity = 323/393 (82.19%), Postives = 359/393 (91.35%), Query Frame = 0 

Query: 1   MDKVSDSSNKWAEDIYWSHFQFTHFYQILAGGSEQKLVLPNKFANNLKKKLPSTVTLKGP 60
           MDKV DSSNKWAEDIYWSHFQFTHFYQILAGG EQ+LV+P+KF+NNLK KLP+TVTLKGP
Sbjct: 1   MDKVGDSSNKWAEDIYWSHFQFTHFYQILAGGCEQQLVIPDKFSNNLKNKLPATVTLKGP 60

Query: 61  SGATWDVGLSANDDKLYFKHGWQEFVKAHSLEQNDLLVFRYNGASQFDVLVFDWKSFCEK 120
           SGATWDVGLS +DDKL FK GWQEFVKAH LEQNDLLVFRYNG SQFDVL+FDWKSFCEK
Sbjct: 61  SGATWDVGLSTSDDKLCFKRGWQEFVKAHYLEQNDLLVFRYNGTSQFDVLIFDWKSFCEK 120

Query: 121 EASYFVKICEHKNSDTGHKAKRKFGEPTLDSFDVDANNGAECASSENNMHDDSMERMIQD 180
           EASYFVKICE+K  D+G +AKRK  EP+LD FDV+ NNGAEC SSEN +HDDSMERMIQD
Sbjct: 121 EASYFVKICENKKIDSGGQAKRKLREPSLDGFDVNINNGAECDSSENIIHDDSMERMIQD 180

Query: 181 VVSKATNLNGQPEVFSAQPIRTIRTRRRKETPKSAAVMTPTPAPVQLSDSDEEATPVKKT 240
           VVSKATN NGQPEVFSA+PIRT++TRR+K+TP + A+++ TP PVQLSDSD EATPVKK 
Sbjct: 181 VVSKATNFNGQPEVFSAEPIRTVQTRRKKKTPNNTAIIS-TPEPVQLSDSDMEATPVKKI 240

Query: 241 GSYAEQYLSNRRAITEEDKNNALKLAEAASSNAGFKVIMRPSHVYRRFYLFIPTQWVTKN 300
           GSY EQY+S+RRAITE +KNNALKLAEAASS+ GFKV+MRPSHVYRRF+LFIPTQWVTKN
Sbjct: 241 GSYVEQYVSHRRAITEGEKNNALKLAEAASSDTGFKVVMRPSHVYRRFFLFIPTQWVTKN 300

Query: 301 LSLCNQDVILRLGNDEWPAKFNFTASRQCGGLTSGWKHFAIDNNLEEFDVCLFEPVPITS 360
           LSL NQD+ILR+G+DEWP KFNFT SRQCGGLTSGWKHF+IDNNLEEFDVC+FEPV  +S
Sbjct: 301 LSLRNQDIILRVGSDEWPTKFNFTPSRQCGGLTSGWKHFSIDNNLEEFDVCVFEPVNKSS 360

Query: 361 GPVVLEVKIFRVVEDVIPLTRVSAKSNRKLIKA 394
           GPVVLEVKIFRVVEDVIPLTRV++KSNRK  KA
Sbjct: 361 GPVVLEVKIFRVVEDVIPLTRVASKSNRKPTKA 392

[Close]
BLAST of Carg25850 vs. TrEMBL
Match: tr|A0A2I4EQD4|A0A2I4EQD4_9ROSI (B3 domain-containing protein REM16-like OS=Juglans regia OX=51240 GN=LOC108991701 PE=4 SV=1)

HSP 1 Score: 395.6 bits (1015), Expect = 1.3e-106
Identity = 197/382 (51.57%), Postives = 267/382 (69.90%), Query Frame = 0 

Query: 9   NKWAEDIYWSHFQFTHFYQILAGGSEQKLVLPNKFANNLKKKLPSTVTLKGPSGATWDVG 68
           +KWAED+YW+HFQ  HF Q L  G +++L +P KF +NLKKKLP +V LKGPSG TW+VG
Sbjct: 9   SKWAEDMYWTHFQTIHFSQFLHNGYDRQLAIPKKFVDNLKKKLPESVVLKGPSGLTWNVG 68

Query: 69  LSANDDKLYFKHGWQEFVKAHSLEQNDLLVFRYNGASQFDVLVFDWKSFCEKEASYFVKI 128
           L++NDD L+F HGWQEFVK HSLE+ND L+F+YNG SQFDVLVFD ++ CEK A+YFV+ 
Sbjct: 69  LTSNDDTLFFNHGWQEFVKDHSLEENDFLIFKYNGGSQFDVLVFDGENLCEKGATYFVRK 128

Query: 129 CEHKNSDTGHKAKRKFGEPTLDSFDVDANNGAECASSENNMHDDS-MERMIQDVVSKATN 188
            EH   D G  +KRK GE ++D         A C+S E  + DD+ +   +Q ++S ATN
Sbjct: 129 SEHTEHDNGCLSKRKLGEASIDEVH------ARCSSPEKVIDDDAVLIPSLQHIISVATN 188

Query: 189 LNGQPEVFSAQPIRTIRTRRRKETPKSAAVMTPTPAPVQLSDSDEEATPVKKTGSYAEQY 248
           +  Q    +  P R+IR RR   + K A     T     +SDSD E TP+ K GSY +QY
Sbjct: 189 IGTQQ---NTSPTRSIRARRSLGSKKPA-----TYQEGAVSDSDAELTPINKNGSYRQQY 248

Query: 249 LSNRRAITEEDKNNALKLAEAASSNAGFKVIMRPSHVYRRFYLFIPTQWVTKNLSLCNQD 308
            SNRR+IT+++  NAL LA+ ASS+  F V+MRP+HVY+RF++ IP+ W+ KNLS  NQ+
Sbjct: 249 QSNRRSITQDEIKNALHLAQEASSDETFLVVMRPTHVYKRFFVSIPSDWMAKNLSKENQE 308

Query: 309 VILRLGNDEWPAKFNFTASRQCGGLTSGWKHFAIDNNLEEFDVCLFEPVPITSGPVVLEV 368
           +ILR+ N+ W A++ F   R  GG+T GWKHFA+DNNLEEFDVCLF+P    +  ++L+V
Sbjct: 309 IILRVENNTWQARYYFHQGRGYGGITGGWKHFAVDNNLEEFDVCLFKPAGHMNYSIILDV 368

Query: 369 KIFRVVEDVIPLTRVSAKSNRK 390
            IFRVV ++ PLT++S+ + +K
Sbjct: 369 SIFRVVHELTPLTQLSSPTPKK 376

[Close]
BLAST of Carg25850 vs. TrEMBL
Match: tr|A0A2P4LT28|A0A2P4LT28_QUESU (B3 domain-containing protein rem16 OS=Quercus suber OX=58331 GN=CFP56_40494 PE=4 SV=1)

HSP 1 Score: 358.2 bits (918), Expect = 2.3e-95
Identity = 181/380 (47.63%), Postives = 241/380 (63.42%), Query Frame = 0 

Query: 9   NKWAEDIYWSHFQFTHFYQILAGGSEQKLVLPNKFANNLKKKLPSTVTLKGPSGATWDVG 68
           +KWAEDIYW+HFQ  HF Q L G  +++L +P KF +NLKKKLP +VTLKGPSG TWDV 
Sbjct: 393 SKWAEDIYWTHFQTIHFSQYLLGDYDRQLAIPKKFVDNLKKKLPQSVTLKGPSGLTWDVE 452

Query: 69  LSANDDKLYFKHGWQEFVKAHSLEQNDLLVFRYNGASQFDVLVFDWKSFCEKEASYFVKI 128
           L    D L+F HGWQEFVK HSLE+ DLLVFRYNG SQFDVL+FD K+ CEK ASYFV+ 
Sbjct: 453 LKTIGDTLFFNHGWQEFVKDHSLEETDLLVFRYNGWSQFDVLIFDGKNLCEKGASYFVRK 512

Query: 129 CEHKNSDTGHKAKRKFGEPTLDSFDVDANNGAECASSENNMHDDSMERMIQDVVSKATNL 188
           C     D G   K+K  E ++D      ++G  C S  N + DDS     +  +      
Sbjct: 513 CGPTEHDNGCLTKKKIREGSIDDVHTPLDDGVRCPSPLNYVSDDSATVPSEQYIISL--- 572

Query: 189 NGQPEVFSAQPIRTIRTRRRKETPKSAAVMTPTPAPVQLSDSDEEATPVKKTGSYAEQYL 248
                V S +  R+ ++  RKE       M  T      +  D E +P+ K G+  +QY+
Sbjct: 573 -----VGSKRTRRSAKSVGRKEPATCGEGMKST------ASDDAECSPIIKNGAQGQQYV 632

Query: 249 SNRRAITEEDKNNALKLAEAASSNAGFKVIMRPSHVYRRFYLFIPTQWVTKNLSLCNQDV 308
           SNRR +TE++  +AL LA+AASS+  +  +MRP+HVY++F+L+IP +W   +LSL NQ++
Sbjct: 633 SNRRLVTEDEIKDALLLAQAASSDDTYLAVMRPTHVYKKFFLYIPLEWAANHLSLENQEI 692

Query: 309 ILRLGNDEWPAKFNFTASRQCGGLTSGWKHFAIDNNLEEFDVCLFEPVPITSGPVVLEVK 368
            LR  ND W A++N   +R  GG+TSGWKHF IDNNLEE DVCLF+P     G  +L+V 
Sbjct: 693 YLRFNNDTWRARYNHNQARGYGGITSGWKHFVIDNNLEELDVCLFKPAGQMDGSTILDVS 752

Query: 369 IFRVVEDVIPLTRVSAKSNR 389
           IFRVV+++ P T ++    R
Sbjct: 753 IFRVVQEISPRTLLTPPQKR 758

[Close]
BLAST of Carg25850 vs. TrEMBL
Match: tr|A0A2N9ITR9|A0A2N9ITR9_FAGSY (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS56699 PE=4 SV=1)

HSP 1 Score: 353.6 bits (906), Expect = 5.7e-94
Identity = 189/411 (45.99%), Postives = 259/411 (63.02%), Query Frame = 0 

Query: 1   MDKVSDSSNKWAEDIYWSHFQFTHFYQILAGGSEQKLVLPNKFANNLKKKLPSTVTLKGP 60
           M ++    NKWAEDIYWSHFQ  HF Q L  G +++L +P KF +NLKKKLP +VTLKGP
Sbjct: 1   MGELCKDWNKWAEDIYWSHFQTIHFTQFLISGYDRQLAIPKKFVDNLKKKLPQSVTLKGP 60

Query: 61  SGATWDVGLSANDDKLYFKHGWQEFVKAHSLEQNDLLVFRYNGASQFDVLVFDWKSFCEK 120
           SG TW+V L+ NDD ++F HGWQEFVK HSLE+ DLLVFRY+G SQFDVL+FD  + CE+
Sbjct: 61  SGLTWNVDLTTNDDTVFFNHGWQEFVKDHSLEETDLLVFRYDGGSQFDVLIFDGNNLCER 120

Query: 121 EASYFVKICEHKNSDTGHKAKRKFGEPTLDSFDVDANNGAECASSENNMHDD-------- 180
            ASYFV+ CEH   D G   K+K  E ++D+     ++G   AS  N+            
Sbjct: 121 GASYFVRKCEHTEHDNGCLVKKKLREGSIDNVLTPLDDGV--ASPVNSXXXXXXXXXXXX 180

Query: 181 -----SMERMIQDVVS-KATNLNGQPEVFSAQPIRTIRTRRRKETPKSAAVMTPTPAPVQ 240
                  E+ I+ +++ K T  N +  V S           +KE   +   +  TP+   
Sbjct: 181 XXXXVPSEQCIKSLIAHKRTRQNARQCVGS-----------KKEPATNGKGVKSTPS--- 240

Query: 241 LSDSDEEATPVKKTGSYAEQYLSNRRAITEEDKNNALKLAEAASSNAGFKVIMRPSHVYR 300
               D   +P+ K+G+  + Y SNRR +TE++  NAL LA+AAS++  F ++MRP+HVY+
Sbjct: 241 ---DDAVCSPITKSGAKPQNYASNRRLVTEDEIKNALLLAQAASTDESFLIVMRPTHVYK 300

Query: 301 RFYLFIPTQWVTKNLSLCNQDVILRLGNDEWPAKFNFTASRQCGGLTSGWKHFAIDNNLE 360
           RF+++IP++ +T +LS  NQD+ LR  ND W  ++NF  SR+ GG+T GWKHFA+DNNLE
Sbjct: 301 RFFVYIPSERLTDHLSSENQDIFLRCNNDTWRTRYNFYPSRRYGGITGGWKHFALDNNLE 360

Query: 361 EFDVCLFEPVPIT-SGPVVLEVKIFRVVEDVIP---LTRVSAKSNRKLIKA 394
           EFDVCLF+P   T    VVL+V IFRVV+++ P    T    +  RKLIK+
Sbjct: 361 EFDVCLFKPAADTIEDTVVLDVSIFRVVQEITPPTLSTPARKRGRRKLIKS 392

The following BLAST results are available for this feature:
BLAST of Carg25850 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_022951820.12.3e-22799.49B3 domain-containing protein REM16-like [Cucurbita moschata] >XP_022951821.1 B3 ... [more]
XP_023538425.13.4e-22397.72B3 domain-containing protein REM16-like [Cucurbita pepo subsp. pepo][more]
XP_023002000.17.6e-22397.72B3 domain-containing protein REM16-like [Cucurbita maxima] >XP_023002001.1 B3 do... [more]
XP_022144339.17.6e-19183.25B3 domain-containing protein REM16 [Momordica charantia][more]
XP_004152721.12.1e-18881.68PREDICTED: B3 domain-containing protein REM16-like [Cucumis sativus] >KGN62556.1... [more]
BLAST of Carg25850 vs. TAIR10
Match NameE-valueIdentityDescription
AT4G33280.12.6e-6036.17AP2/B3-like transcriptional factor family protein[more]
AT3G18990.12.4e-2928.06AP2/B3-like transcriptional factor family protein[more]
AT1G49480.18.8e-1629.89related to vernalization1 1[more]
AT4G34400.16.3e-1435.23AP2/B3-like transcriptional factor family protein[more]
AT3G06160.21.5e-1029.55AP2/B3-like transcriptional factor family protein[more]
BLAST of Carg25850 vs. Swiss-Prot
Match NameE-valueIdentityDescription
sp|Q8RYD1|REM16_ARATH4.7e-5936.17B3 domain-containing protein REM16 OS=Arabidopsis thaliana OX=3702 GN=REM16 PE=2... [more]
sp|Q8L3W1|VRN1_ARATH4.3e-2828.06B3 domain-containing transcription factor VRN1 OS=Arabidopsis thaliana OX=3702 G... [more]
sp|Q2QMT5|Y1209_ORYSJ5.8e-2526.39B3 domain-containing protein LOC_Os12g40090 OS=Oryza sativa subsp. japonica OX=3... [more]
sp|Q10GM3|Y3222_ORYSJ5.8e-2526.32B3 domain-containing protein Os03g0622200 OS=Oryza sativa subsp. japonica OX=399... [more]
sp|Q10GM4|Y3221_ORYSJ1.9e-2342.15B3 domain-containing protein Os03g0622100 OS=Oryza sativa subsp. japonica OX=399... [more]
BLAST of Carg25850 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A0A0LRE7|A0A0A0LRE7_CUCSA1.4e-18881.68Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G360730 PE=4 SV=1[more]
tr|A0A1S3BAT7|A0A1S3BAT7_CUCME8.9e-18882.19B3 domain-containing protein REM16-like OS=Cucumis melo OX=3656 GN=LOC103487931 ... [more]
tr|A0A2I4EQD4|A0A2I4EQD4_9ROSI1.3e-10651.57B3 domain-containing protein REM16-like OS=Juglans regia OX=51240 GN=LOC10899170... [more]
tr|A0A2P4LT28|A0A2P4LT28_QUESU2.3e-9547.63B3 domain-containing protein rem16 OS=Quercus suber OX=58331 GN=CFP56_40494 PE=4... [more]
tr|A0A2N9ITR9|A0A2N9ITR9_FAGSY5.7e-9445.99Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS56699 PE=4 SV=1[more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0003677DNA binding
Vocabulary: INTERPRO
TermDefinition
IPR015300DNA-bd_pseudobarrel_sf
IPR003340B3_DNA-bd
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003677 DNA binding
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Carg25850-RACarg25850-RAmRNA


InterPro
Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR003340B3 DNA binding domainSMARTSM01019B3_2coord: 25..115
e-value: 4.5E-14
score: 62.7
coord: 275..373
e-value: 2.1E-10
score: 50.6
IPR003340B3 DNA binding domainPFAMPF02362B3coord: 32..110
e-value: 1.4E-18
score: 66.5
coord: 275..371
e-value: 5.0E-11
score: 42.3
IPR003340B3 DNA binding domainPROSITEPS50863B3coord: 22..115
score: 16.116
IPR003340B3 DNA binding domainPROSITEPS50863B3coord: 275..373
score: 11.11
IPR003340B3 DNA binding domainCDDcd10017B3_DNAcoord: 32..113
e-value: 9.08019E-22
score: 87.7684
IPR003340B3 DNA binding domainCDDcd10017B3_DNAcoord: 275..371
e-value: 3.30394E-17
score: 75.4421
IPR015300DNA-binding pseudobarrel domain superfamilyGENE3DG3DSA:2.40.330.10coord: 253..375
e-value: 3.9E-26
score: 93.2
IPR015300DNA-binding pseudobarrel domain superfamilyGENE3DG3DSA:2.40.330.10coord: 17..118
e-value: 6.1E-29
score: 102.0
IPR015300DNA-binding pseudobarrel domain superfamilySUPERFAMILYSSF101936DNA-binding pseudobarrel domaincoord: 271..361
IPR015300DNA-binding pseudobarrel domain superfamilySUPERFAMILYSSF101936DNA-binding pseudobarrel domaincoord: 20..115
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 206..238
NoneNo IPR availablePANTHERPTHR31391:SF45B3 DOMAIN-CONTAINING PROTEIN REM16coord: 228..376
NoneNo IPR availablePANTHERPTHR31391FAMILY NOT NAMEDcoord: 8..133
NoneNo IPR availablePANTHERPTHR31391:SF45B3 DOMAIN-CONTAINING PROTEIN REM16coord: 8..133
NoneNo IPR availablePANTHERPTHR31391FAMILY NOT NAMEDcoord: 228..376