Carg25832 (gene) Silver-seed gourd | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Carg25832
Type	gene
Organism	Cucurbita argyrosperma (Silver-seed gourd)
Description	Dimethylallyl, adenosine tRNA methylthiotransferase
Location	Cucurbita_argyrosperma_scaffold_356 : 59575 .. 64393 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCCCAAAAAGGAAACTGTGCAGAATCGGTTAACTATTCACAAAGGCGAAGGTTTGATGCTCGACGCAGGTTTGGCGGATCGTCGGCGACAGACGGCGGACTGAGATTTGTTGATTTCTTACAAACCTTCCGGCGGGCGTTAGCTCCACTGCCGGACTTGCCTTCTAATTGCTTGTTGAAATCGCCTGCGGACGGCGATACAGCGCACAATAGCGCGGAAAATCTTGACCGGATTTCGATAATTCTATTGGTTAGTTGTGTTTTATCGGCAAAACAAGTGTAATTGTCAGAGCAAACGATTTTGCTCGTTACTGTTTGCTGGAAAAGAAATTTATGGATTTGGTGTGAAGATCCATCGGATCGATCTGCTTGAAATTTTGCTTCCATTTTGTCTTCTGTTTCTGGTGCGAGGTGTTGATATATAGAGAGAGGAGATATAGTGGCGGGATGAAGGTGAAGAAGAAGAGATATGGCGAAGGTAGAGTGGGGTTATCAAGGAAGAGGTAAATTGGCGTTTTCGTACAAGAAAACCACTCTCATTATTTGCTCTATCAACATTATCGTTGCTCTCTATGTTCTTCGATCTCTATATGCTTCTCTCTACATCTATACGGATAATGATTCTCGAAGTGGTTAGTGTTTGAGCTAGTTTCCTTTTTCATTTTTTCTGTTGTTGATTCGTGTTGAAGATTATTGAGCAATGTTTAACATTGTATTTATTCTGTCTATTTTCTTTATTCTGAGCTAGTTGTAAAGTACACTCCGGATCAGATTAGGAAAATGGAACAGTTTATTCGGATTCGTCGAGCCTCTAAGCCGGTAGAGCTCATTAAATTTGTAAGACTCCAACATGATTTGAGGAACCTTGTTTGTTCAGTTTACCGTGAGTAGATCTGTTTTAGGAGAACTTATATTTGTTTGGTGAATATCATTCTTTTGGTGTAAAGGTTAAGGAGCTTAAAGAATTCTCCCAAGAAGAAACGGTGAATGAATTGCCTCAACCATTGAAACAGAAGATAACTGAGGAAATTCTTCTGAAATTGAGAAGCTCCAATACTAGCTCCAACAGTACTCAGCAGAGAGGTCAGCACTGTCTGATAATTTCCTTGCAATATCTATCGCCTAGAATTCTCACTGCTTAGAGGGCAAAGATATTGGATAGCAATTACTTCAAGCATTTGATTGGTTAACCTTTCTCTTAGATTCGATCGATCATAGACTAACACGTTTTCTTATTTGTTCATTTTTCACAAAAGAAGTTTGATATCAATATTCTGATAAAATTTAAGTTAGAAAGTATTGTTATTTTGGCTTGGGTTTTGCCTGAATACCATGGTTATCATTTTTCATGACTAAACTGTATGGCACTAGTGTGACTCGAGTCGAATCCAAAGAGACTATATGTCAGCTGCATCACTTTAGAGAGACGGAATTTATTTATTTTTAGATAACTGTGTCTTGATATCTAAAACTGTAAGATTATTTTCTATAGTTATGTTGCAAATTAGTTGGCTAGAGTTCATTTCCAATTGAATTTGGTGTAGAGTTGCCATTGATCTGACACTGATTACTTGTTGAATTGACTGTATTAGATTCGTTGTGGTCACAATGATGTTGTTGCTGCTTGACATAACATGTAAACTGCCACATAATATGGTCATAATTTTGGAAGTTAGTTTGTACCTTGGTTTCATATATGTCAACCCTGCTCCACCTTTTTTTTCTTTTTTCTCAACACTAATACTTCACTAGAACACTATAGATTTAAGAAGTATGAATATAGATACAAGACACGGATGCAACACCACACAGACGTGGTATATGTTATCTTGTAAAATTCTAGGAAGTGAGCATGGCAAGGACATGTTTATTAAAATATACATTTTTTAAAATACATATCATTTTTATACCAGAAGAAAATTTGACGTTGATAAGATAATGCATTTATATGCTCTAAAAAATGAGTTTGGTATATTTAACTCTCAAAATTTATTATTTTTGTCCTAGATTATTTTGTATCTGTTTAGTATACTTAATAAGAGATCAATATAACAAATGTTGGGCCTATTTTGGATTTGTATAACTAGTGTTTTTTTAACACATATCTCTTTTGCTTTCAAGTGTCTGATGTGTGTACAACAAGTGTCCAAGTGTCTATACGAACACGCTAGTCAAACTGAAGTGCTATTAGATACTGTATTCAACCAACTTCATTCAGATTAGATTACTAATGGCATGATTTTTCTCTATTCCATTTCAATTCTTTACTACCTCCAAGAAAATTTTATTTTCTCAACTCTATTGCTTTTGCATCTTTTTGTGAAGAAAAGAATGTACGTGCTATGGTCATGCAGGTTTCTTTTGGTCAAATATTTTTTAGTGTGCATCATTTGTAGATAAGTTAAAATCTTTGCATTCCTTGAAAAGAAACAAAAGTATATGCATCCACAGGAAGACTGAAGTGAAAAGTTTACTTGTTAAAATAACCTCTCAATCATAGTTATAGAATAACTTTCAAACAAATTTGGAAAGACTGAAGTGAGAAAAAGGAACTGGAGAAATGAGGTCTATTGAAAATGCGACTGTTCCTTTTCAACCCAATTTCCTTAGAAATAGCTCCTAGGATCGGTTATCCATAAGATCGTGCTCCTCTCTAAAACGGTGACCAAGTAATAATTGATTAATGAAAACCTTTAAATTTCCTGTGGAAACTGATTGCTGAAACAGTTTGAAGAAGCCTCCTACAATAAACTGCAAACTAAGGAGTATTCTGAAAAGAATCAAATCTTTTAGCGAACCACATTCTTTTCTGACCTTAACCTAATGCTGCAATTGGTTAATGATTCAAAGAGGAAAACTGGGTTTGCATTCACTAACATATTTGCATGTTCCTTTCAAAAAAAAAATGAAAGGTTTCCTTTGGACCCCTTTTTGGCGATGGTGATGTGTGTGTGTGTGTTGGGGGGTTGGTTGGGGAGACCTTATAAAAGGGTCTCTCAAGTTAGATATTTCTTGAGTTACTGGATTAAATATAATTTGAAGATCGTACCAAGTGTATCGACCTATATAGCCTATAGAATTATAAAGTAACGATTCCTATATTATAACAATAACAACGTCAATAATATCAAGAAAAAGAAGGGGATGATATATTTTATCCTAATGGGGTTAGATTCTTATTTATTAATAACCATTGTGGTACACCACATTAATCATTAGTTGCCAAAACAATACATTTCTATGCTTCCCCCTGGCTGTCTTCATAGACATCAAAAATGTGTTGGATATTCTACAATCCGCTTACACGTATTCATTATTGCAACTAAAGTTTAAAGGTGAGTAAAGTGTGCAATTTATGCTTCATGAATAATCTGCTATCTTGCCAAAATTTAATATCCTGCAAGATGTTTCTTGTTATAATCTTCCACTTAAATGACCAGAAGCAGTAGAAAGCTGGAGAAAGGAAAAATTGGAAGAAGCAAGGAAGTTAATCACAGAACAAACGATTGAAAATTCAACTCTTTCTTCTGAAGATGCTGGTATGGAAGTTCTGTAACAGTGTACCTTTTGTTTTTTGTAATATTGTGCTAGAAAGTCATACCTGAGATGCAGACCTGTGAAAGACACCCGATAACCTCGTTGGACCGATGCCAATAAACTTTTTTCCTATTCTGGCAGGGATTCTAGTAAAAGCCTTGGAGACCGATTGGGCAGTGCTGGCTGAAGAAATTGGTGTGTGGATACCAGCGGAGATCTTCAACAGGGAGCATGATGATAAGCCTGAAGACGCAGATGAATTCGGTAAATTTTTGCGACTCCCTAGAGCGACATTTTGTTCACCATATTTATTAATTTCTTCTAGCTAAAATCTCAGTTTATATGTCACCAAGTTGTTCATTCCCCCTCTTTATGCAGATGGTGAAGTTTTACCTGGCAGGCCACTTCCACCTGAATGTAACGCCGAGCTCCATACAGATTACGGTGGTGCTGCTGTAAGATGGGGCCTAACACATCATAAACAAAGTGCAGCGGATTGCTGTCAGGCTTGCTTGGATCATGTGAAACGAGCGCAACCAGGTGGAAGAAAATGCAACATCTGGGTTTACTGTCCATCTGAGACTGGATGTCACTCTCCTGATATCTATGAGCATAAATATATGGAGTGCTGGCTGAAATATGTAAGCTCCAAACTGTTTTTGTGATAGTAAATCTCTTTTGTAGGCTCACTTGAATCTAACTTTTCAAATCTTCAAATTCAAATGCAGGCTGAAACTCCCAAACTGAATTTCAAGACCTACTATCCACAATCTTACAGAAACTCACACCCGACCGCCCCGCTGATCGTCCCTTGGGTCTCTGGTGTTATTAGCGTTTAATTTTTACGACAAATCAGGCAAGAAACTTCCACTAAAATGATTGTGACTTCCCTTGTCTTTCTTACAATTGAGCATCATTGTCCAAAGAGTTGTATGAATGAAAATTTTGAGGGCTGTTTAGGGGACTATAGCAGTTGATTGAATGTTCTGTTTGATTCATATCTGGCTTACTTTCATGTAACACGGGTTTTGGCGAACTTGGTGCCACCACTTCATATCGACGAGTCGAGGGCCGAGAGGGCGATAGAGGTAACATGAAAAAGAAAGGCTATTTTTTTACTATTAACTTTTGGAATTGATTTATTTGAGCTTTGAACTTACTCTCCAATGTATTTAGGGTATATGATGAGGTTCCAAATGTTTGGAAAAGCACCACCACTAATCTACGTTGATGTTTCAGATAATGGCATAAGCATCTGTTTAGGTTTATATCGACTCAAAT

mRNA sequence

ATGCCCAAAAAGGAAACTGTGCAGAATCGGTTAACTATTCACAAAGGCGAAGGTTTGATGCTCGACGCAGGTTTGGCGGATCGTCGGCGACAGACGGCGGACTGAGATTTGTTGATTTCTTACAAACCTTCCGGCGGGCGTTAGCTCCACTGCCGGACTTGCCTTCTAATTGCTTGTTGAAATCGCCTGCGGACGGCGATACAGCGCACAATAGCGCGGAAAATCTTGACCGGATTTCGATAATTCTATTGGTTAGTTGTGTTTTATCGGCAAAACAAGTGTAATTGTCAGAGCAAACGATTTTGCTCGTTACTGTTTGCTGGAAAAGAAATTTATGGATTTGGTGTGAAGATCCATCGGATCGATCTGCTTGAAATTTTGCTTCCATTTTGTCTTCTGTTTCTGGTGCGAGGTGTTGATATATAGAGAGAGGAGATATAGTGGCGGGATGAAGGTGAAGAAGAAGAGATATGGCGAAGGTAGAGTGGGGTTATCAAGGAAGAGGTAAATTGGCGTTTTCGTACAAGAAAACCACTCTCATTATTTGCTCTATCAACATTATCGTTGCTCTCTATGTTCTTCGATCTCTATATGCTTCTCTCTACATCTATACGGATAATGATTCTCGAAGTGTTGTAAAGTACACTCCGGATCAGATTAGGAAAATGGAACAGTTTATTCGGATTCGTCGAGCCTCTAAGCCGGTAGAGCTCATTAAATTTGTAAGACTCCAACATGATTTGAAGTAGATCTGTTTTAGGAGAACTTATATTTGTTTGGTGAATATCATTCTTTTGGTGTAAAGGTTAAGGAGCTTAAAGAATTCTCCCAAGAAGAAACGGTGAATGAATTGCCTCAACCATTGAAACAGAAGATAACTGAGGAAATTCTTCTGAAATTGAGAAGCTCCAATACTAGCTCCAACAGTACTCAGCAGAGAGAAGCAGTAGAAAGCTGGAGAAAGGAAAAATTGGAAGAAGCAAGGAAGTTAATCACAGAACAAACGATTGAAAATTCAACTCTTTCTTCTGAAGATGCTGGGATTCTAGTAAAAGCCTTGGAGACCGATTGGGCAGTGCTGGCTGAAGAAATTGGTGTGTGGATACCAGCGGAGATCTTCAACAGGGAGCATGATGATAAGCCTGAAGACGCAGATGAATTCGATGGTGAAGTTTTACCTGGCAGGCCACTTCCACCTGAATGTAACGCCGAGCTCCATACAGATTACGGTGGTGCTGCTGTAAGATGGGGCCTAACACATCATAAACAAAGTGCAGCGGATTGCTGTCAGGCTTGCTTGGATCATGTGAAACGAGCGCAACCAGGTGGAAGAAAATGCAACATCTGGGTTTACTGTCCATCTGAGACTGGATGTCACTCTCCTGATATCTATGAGCATAAATATATGGAGTGCTGGCTGAAATATGCTGAAACTCCCAAACTGAATTTCAAGACCTACTATCCACAATCTTACAGAAACTCACACCCGACCGCCCCGCTGATCGTCCCTTGGGTCTCTGGTGTTATTAGCGTTTAATTTTTACGACAAATCAGGCAAGAAACTTCCACTAAAATGATTGTGACTTCCCTTGTCTTTCTTACAATTGAGCATCATTGTCCAAAGAGTTGTATGAATGAAAATTTTGAGGGCTGTTTAGGGGACTATAGCAGTTGATTGAATGTTCTGTTTGATTCATATCTGGCTTACTTTCATGTAACACGGGTTTTGGCGAACTTGGTGCCACCACTTCATATCGACGAGTCGAGGGCCGAGAGGGCGATAGAGGTAACATGAAAAAGAAAGGCTATTTTTTTACTATTAACTTTTGGAATTGATTTATTTGAGCTTTGAACTTACTCTCCAATGTATTTAGGGTATATGATGAGGTTCCAAATGTTTGGAAAAGCACCACCACTAATCTACGTTGATGTTTCAGATAATGGCATAAGCATCTGTTTAGGTTTATATCGACTCAAAT

Coding sequence (CDS)

ATGGCGAAGGTAGAGTGGGGTTATCAAGGAAGAGGTAAATTGGCGTTTTCGTACAAGAAAACCACTCTCATTATTTGCTCTATCAACATTATCGTTGCTCTCTATGTTCTTCGATCTCTATATGCTTCTCTCTACATCTATACGGATAATGATTCTCGAAGTGTTGTAAAGTACACTCCGGATCAGATTAGGAAAATGGAACAGTTTATTCGGATTCGTCGAGCCTCTAAGCCGGTAGAGCTCATTAAATTTGTAAGACTCCAACATGATTTGAAGTAG

Protein sequence

MAKVEWGYQGRGKLAFSYKKTTLIICSINIIVALYVLRSLYASLYIYTDNDSRSVVKYTPDQIRKMEQFIRIRRASKPVELIKFVRLQHDLK

Homology

[Close]

BLAST of Carg25832 vs. NCBI nr
Match: XP_022951152.1 (uncharacterized protein LOC111454084 [Cucurbita moschata] >XP_022951154.1 uncharacterized protein LOC111454084 [Cucurbita moschata])

HSP 1 Score: 166.8 bits (421), Expect = 3.5e-38
Identity = 84/86 (97.67%), Postives = 86/86 (100.00%), Query Frame = 0


Query: 1  MAKVEWGYQGRGKLAFSYKKTTLIICSINIIVALYVLRSLYASLYIYTDNDSRSVVKYTP 60
          MAKVEWGYQGRGKLAFSYKKTTLIICSINIIVALYVLRSLYASLY+YTDNDSRSVVKYTP
Sbjct: 1  MAKVEWGYQGRGKLAFSYKKTTLIICSINIIVALYVLRSLYASLYLYTDNDSRSVVKYTP 60

Query: 61 DQIRKMEQFIRIRRASKPVELIKFVR 87
          DQIRKMEQFIRIRRASKPVELIKFV+
Sbjct: 61 DQIRKMEQFIRIRRASKPVELIKFVK 86

[Close]

BLAST of Carg25832 vs. NCBI nr
Match: XP_023001941.1 (uncharacterized protein LOC111495970 [Cucurbita maxima])

HSP 1 Score: 166.8 bits (421), Expect = 3.5e-38
Identity = 84/86 (97.67%), Postives = 86/86 (100.00%), Query Frame = 0


Query: 1  MAKVEWGYQGRGKLAFSYKKTTLIICSINIIVALYVLRSLYASLYIYTDNDSRSVVKYTP 60
          MAKVEWGYQGRGKLAFSYKKTTLIICSINIIVALYVLRSLYASLY+YTDNDSRSVVKYTP
Sbjct: 1  MAKVEWGYQGRGKLAFSYKKTTLIICSINIIVALYVLRSLYASLYLYTDNDSRSVVKYTP 60

Query: 61 DQIRKMEQFIRIRRASKPVELIKFVR 87
          DQIRKMEQFIRIRRASKPVELIKFV+
Sbjct: 61 DQIRKMEQFIRIRRASKPVELIKFVK 86

[Close]

BLAST of Carg25832 vs. NCBI nr
Match: XP_023537717.1 (uncharacterized protein LOC111798662 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 166.8 bits (421), Expect = 3.5e-38
Identity = 84/86 (97.67%), Postives = 86/86 (100.00%), Query Frame = 0


Query: 1  MAKVEWGYQGRGKLAFSYKKTTLIICSINIIVALYVLRSLYASLYIYTDNDSRSVVKYTP 60
          MAKVEWGYQGRGKLAFSYKKTTLIICSINIIVALYVLRSLYASLY+YTDNDSRSVVKYTP
Sbjct: 1  MAKVEWGYQGRGKLAFSYKKTTLIICSINIIVALYVLRSLYASLYLYTDNDSRSVVKYTP 60

Query: 61 DQIRKMEQFIRIRRASKPVELIKFVR 87
          DQIRKMEQFIRIRRASKPVELIKFV+
Sbjct: 61 DQIRKMEQFIRIRRASKPVELIKFVK 86

[Close]

BLAST of Carg25832 vs. NCBI nr
Match: XP_022962386.1 (uncharacterized protein LOC111462847 [Cucurbita moschata] >XP_023547033.1 uncharacterized protein LOC111805955 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 151.0 bits (380), Expect = 2.0e-33
Identity = 75/86 (87.21%), Postives = 82/86 (95.35%), Query Frame = 0


Query: 1  MAKVEWGYQGRGKLAFSYKKTTLIICSINIIVALYVLRSLYASLYIYTDNDSRSVVKYTP 60
          MA+VEWGYQGRGK A SYKKTTLIICSINIIVALYV RSLYASLY+YTDNDS++VVKYTP
Sbjct: 1  MARVEWGYQGRGKWACSYKKTTLIICSINIIVALYVFRSLYASLYLYTDNDSQNVVKYTP 60

Query: 61 DQIRKMEQFIRIRRASKPVELIKFVR 87
          DQIRKME+FIRIRRAS+PVELIK V+
Sbjct: 61 DQIRKMEEFIRIRRASEPVELIKLVK 86

[Close]

BLAST of Carg25832 vs. NCBI nr
Match: XP_022996464.1 (uncharacterized protein LOC111491706 [Cucurbita maxima])

HSP 1 Score: 149.4 bits (376), Expect = 5.8e-33
Identity = 74/86 (86.05%), Postives = 81/86 (94.19%), Query Frame = 0


Query: 1  MAKVEWGYQGRGKLAFSYKKTTLIICSINIIVALYVLRSLYASLYIYTDNDSRSVVKYTP 60
          MA+VEWGYQGRGK A SYKKTTLIICSINIIVALYV RSLYASLY+YTDNDS++V KYTP
Sbjct: 1  MARVEWGYQGRGKWACSYKKTTLIICSINIIVALYVFRSLYASLYLYTDNDSQNVAKYTP 60

Query: 61 DQIRKMEQFIRIRRASKPVELIKFVR 87
          DQIRKME+FIRIRRAS+PVELIK V+
Sbjct: 61 DQIRKMEEFIRIRRASEPVELIKLVK 86

[Close]

BLAST of Carg25832 vs. TAIR10
Match: AT4G33380.1 (unknown protein)

HSP 1 Score: 80.5 bits (197), Expect = 6.0e-16
Identity = 47/91 (51.65%), Postives = 69/91 (75.82%), Query Frame = 0


Query: 5  EW--GYQGRGKLAFSYKKTTLIICSINIIVALYVLRSLYA-SLYIYTDNDSRSVVKYTPD 64
          EW  G  G G L  S+K+ TL++C  NI++AL+VLR LYA SL+IY++ND  +VVKYT D
Sbjct: 7  EWTGGIAGTGVL--SFKRITLLVCFFNILIALFVLRFLYASSLHIYSNND--NVVKYTAD 66

Query: 65 QIRKMEQFIRIRRASKPVELIKFV-RLQHDL 92
          +IRKME+ IRIRR+ +P  +++ V +L+H++
Sbjct: 67 EIRKMEESIRIRRSKEPTLILQLVKKLKHEV 93

[Close]

BLAST of Carg25832 vs. TrEMBL
Match: tr|A0A1S3BBJ1|A0A1S3BBJ1_CUCME (uncharacterized protein LOC103487906 OS=Cucumis melo OX=3656 GN=LOC103487906 PE=4 SV=1)

HSP 1 Score: 147.1 bits (370), Expect = 1.9e-32
Identity = 72/86 (83.72%), Postives = 80/86 (93.02%), Query Frame = 0


Query: 1  MAKVEWGYQGRGKLAFSYKKTTLIICSINIIVALYVLRSLYASLYIYTDNDSRSVVKYTP 60
          MA+VEWGYQGRGK   SYKKTTLIICSINIIVALYV RSLYASLY+Y+DNDS SVVKYTP
Sbjct: 1  MARVEWGYQGRGKWTCSYKKTTLIICSINIIVALYVFRSLYASLYLYSDNDSPSVVKYTP 60

Query: 61 DQIRKMEQFIRIRRASKPVELIKFVR 87
          DQIRKME+F+R+RRAS+PVELIK V+
Sbjct: 61 DQIRKMEEFVRVRRASEPVELIKLVK 86

[Close]

BLAST of Carg25832 vs. TrEMBL
Match: tr|A0A0A0LLA7|A0A0A0LLA7_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G360010 PE=4 SV=1)

HSP 1 Score: 146.0 bits (367), Expect = 4.2e-32
Identity = 71/86 (82.56%), Postives = 80/86 (93.02%), Query Frame = 0


Query: 1  MAKVEWGYQGRGKLAFSYKKTTLIICSINIIVALYVLRSLYASLYIYTDNDSRSVVKYTP 60
          MA+VEWGYQGRGK   SYKKTT+IICSINIIVALYV RSLYASLY+Y+DNDS SVVKYTP
Sbjct: 1  MARVEWGYQGRGKWTCSYKKTTVIICSINIIVALYVFRSLYASLYLYSDNDSPSVVKYTP 60

Query: 61 DQIRKMEQFIRIRRASKPVELIKFVR 87
          DQIRKME+F+R+RRAS+PVELIK V+
Sbjct: 61 DQIRKMEEFVRVRRASEPVELIKLVK 86

[Close]

BLAST of Carg25832 vs. TrEMBL
Match: tr|M5XD09|M5XD09_PRUPE (Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_1G438400 PE=4 SV=1)

HSP 1 Score: 126.7 bits (317), Expect = 2.7e-26
Identity = 62/87 (71.26%), Postives = 77/87 (88.51%), Query Frame = 0


Query: 1  MAKV-EWGYQGRGKLAFSYKKTTLIICSINIIVALYVLRSLYASLYIYTDNDSRSVVKYT 60
          MA+V EWG++GR K   SYKKTTLI+CSINI+VALYVLRSLYASLYIY+D DSR  ++YT
Sbjct: 1  MARVGEWGFKGRAKWGCSYKKTTLIVCSINIVVALYVLRSLYASLYIYSDRDSRPTLEYT 60

Query: 61 PDQIRKMEQFIRIRRASKPVELIKFVR 87
          PDQIRKME+ +RIR+A++PVELI+ V+
Sbjct: 61 PDQIRKMEESVRIRKAAEPVELIRLVK 87

[Close]

BLAST of Carg25832 vs. TrEMBL
Match: tr|E0CP81|E0CP81_VITVI (Uncharacterized protein OS=Vitis vinifera OX=29760 GN=VIT_18s0001g10750 PE=4 SV=1)

HSP 1 Score: 123.6 bits (309), Expect = 2.3e-25
Identity = 63/86 (73.26%), Postives = 75/86 (87.21%), Query Frame = 0


Query: 1  MAKVEWGYQGRGKLAFSYKKTTLIICSINIIVALYVLRSLYASLYIYTDNDSRSVVKYTP 60
          MA++EWG+QGRGK   SYK+TTLIICSINI VALYVL SLY S+YI ++ DS+S VKYTP
Sbjct: 1  MARIEWGFQGRGKWC-SYKRTTLIICSINIAVALYVLHSLYNSIYISSNIDSQSAVKYTP 60

Query: 61 DQIRKMEQFIRIRRASKPVELIKFVR 87
          DQIRKME+ IRIRRAS+PVEL+K V+
Sbjct: 61 DQIRKMEESIRIRRASEPVELVKLVK 85

[Close]

BLAST of Carg25832 vs. TrEMBL
Match: tr|A0A1Q3D818|A0A1Q3D818_CEPFO (Uncharacterized protein OS=Cephalotus follicularis OX=3775 GN=CFOL_v3_32069 PE=4 SV=1)

HSP 1 Score: 117.1 bits (292), Expect = 2.1e-23
Identity = 60/87 (68.97%), Postives = 72/87 (82.76%), Query Frame = 0


Query: 1  MAKVEWGYQGRGKLAFSYKKTTLIICSINIIVALYVLRSLYASLYIYT-DNDSRSVVKYT 60
          MA+ EWGY GRGK   SYKK TLI+CSINI+VALYVLRSLY SLYI++ +ND  SVV YT
Sbjct: 1  MARGEWGYHGRGKWNCSYKKITLIVCSINIVVALYVLRSLYISLYIFSNNNDLLSVVNYT 60

Query: 61 PDQIRKMEQFIRIRRASKPVELIKFVR 87
          PDQIRKME+ +RIRR ++PV LI+ V+
Sbjct: 61 PDQIRKMEESLRIRRENQPVNLIELVK 87

The following BLAST results are available for this feature:

BLAST of Carg25832 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022951152.1	3.5e-38	97.67	uncharacterized protein LOC111454084 [Cucurbita moschata] >XP_022951154.1 unchar...	[more]
XP_023001941.1	3.5e-38	97.67	uncharacterized protein LOC111495970 [Cucurbita maxima]	[more]
XP_023537717.1	3.5e-38	97.67	uncharacterized protein LOC111798662 [Cucurbita pepo subsp. pepo]	[more]
XP_022962386.1	2.0e-33	87.21	uncharacterized protein LOC111462847 [Cucurbita moschata] >XP_023547033.1 unchar...	[more]
XP_022996464.1	5.8e-33	86.05	uncharacterized protein LOC111491706 [Cucurbita maxima]	[more]

BLAST of Carg25832 vs. TAIR10


Match Name	E-value	Identity	Description
AT4G33380.1	6.0e-16	51.65	unknown protein	[more]

BLAST of Carg25832 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of Carg25832 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A1S3BBJ1\|A0A1S3BBJ1_CUCME	1.9e-32	83.72	uncharacterized protein LOC103487906 OS=Cucumis melo OX=3656 GN=LOC103487906 PE=...	[more]
tr\|A0A0A0LLA7\|A0A0A0LLA7_CUCSA	4.2e-32	82.56	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G360010 PE=4 SV=1	[more]
tr\|M5XD09\|M5XD09_PRUPE	2.7e-26	71.26	Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_1G438400 PE=4 SV=1	[more]
tr\|E0CP81\|E0CP81_VITVI	2.3e-25	73.26	Uncharacterized protein OS=Vitis vinifera OX=29760 GN=VIT_18s0001g10750 PE=4 SV=...	[more]
tr\|A0A1Q3D818\|A0A1Q3D818_CEPFO	2.1e-23	68.97	Uncharacterized protein OS=Cephalotus follicularis OX=3775 GN=CFOL_v3_32069 PE=4...	[more]

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg25832-RA	Carg25832-RA	mRNA

InterPro

Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR33344	FAMILY NOT NAMED	coord: 2..86
None	No IPR available	PANTHER	PTHR33344:SF1	SUBFAMILY NOT NAMED	coord: 2..86

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Carg25832	Cla022554	Watermelon (97103) v1	carwmB0263
Carg25832	Csa2G360010	Cucumber (Chinese Long) v2	carcuB0299
Carg25832	MELO3C010883	Melon (DHL92) v3.5.1	carmeB0274
Carg25832	ClCG08G015730	Watermelon (Charleston Gray)	carwcgB0264
Carg25832	CSPI02G19350	Wild cucumber (PI 183967)	carcpiB0303
Carg25832	Cucsa.232730	Cucumber (Gy14) v1	carcgyB0322
Carg25832	CmaCh05G001930	Cucurbita maxima (Rimu)	carcmaB0378
Carg25832	CmaCh12G005250	Cucurbita maxima (Rimu)	carcmaB0377
Carg25832	CmoCh05G001920	Cucurbita moschata (Rifu)	carcmoB0375
Carg25832	CmoCh12G004670	Cucurbita moschata (Rifu)	carcmoB0374
Carg25832	Lsi08G014540	Bottle gourd (USVL1VR-Ls)	carlsiB245
Carg25832	Cp4.1LG11g01620	Cucurbita pepo (Zucchini)	carcpeB0382
Carg25832	Cp4.1LG07g05200	Cucurbita pepo (Zucchini)	carcpeB0383
Carg25832	CsGy2G019220	Cucumber (Gy14) v2	carcgybB0286
Carg25832	MELO3C010883.2	Melon (DHL92) v3.6.1	carmedB0286
Carg25832	CsaV3_2G028030	Cucumber (Chinese Long) v3	carcucB0302
Carg25832	Cla97C08G159310	Watermelon (97103) v2	carwmbB0280
Carg25832	Bhi04G000297	Wax gourd	carwgoB0356

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
Carg25832	Carg11842	Silver-seed gourd	carcarB215

The following block(s) are covering this gene:

None