Carg25818 (gene) Silver-seed gourd | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Carg25818
Type	gene
Organism	Cucurbita argyrosperma (Silver-seed gourd)
Description	Protein of unknown function, DUF538
Location	Cucurbita_argyrosperma_scaffold_332 : 98410 .. 101500 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TCAACCTCTGAATACATTTCTCAAAAACCTGATTCCCTCATTCTTCTTCGTCAATTTCCACCATGATCCTCTCTATCTCTTCCCCTTTCTCACTCCTCTCTTTCATCCTATTCTTCGCCACTCCTCTCATCGCCGCTCCTGAGCCATCCACCATCTACGATCATCTGCATCGTCATGGCCTCCCCATTGGCCTCCTCCCCAAGAACATTACCAGATTCTCAATCGACTCTTCCACCGGCCGTTTTCAGGTCTTCCTCGACCAGCCCTGCAATGCCAAGTTCGAGAATGAGGTTCACTATGATTTCAACGTCTCCGGCAGGCTCGCCTACGGCCAGATCGCTGAATTGGCTGGAATTTCTTCGCAGGAGCTCTTTCTTTGGTTTCCTGTTAAGGGAATTCGTGTCGATTTGCACACCTCTGGTGTAATACATTTCGACGTCGGCGTTGTTGACAAACAGTTCTCTCTTTCTCTGTTTGAATCCCCGCCTGATTGCACTGCGGCTGATCCGGTTGATCGATCCGTCGCGTTGGATGGAGTTTCTCTCGGTTTGGATGGGGCGTTTTCATGGTACGTTGGAGCTATTGTTTTTGCTGGTTCATCATCTATTTTACTTGTACCGAATTGATATATATGGTGCGATAGTAATTATGATGATGTTGATATCTTTGGTTAGATTTTTGCGTTGTTTTGGGAAATATTGTTGTTCATTGTGGATCAGGAAGCATTGGTATTATACTTCACAAAGGGCAGGCATGTTGTGCTAGTTATCATTACGATAAAATCCATGTTCTGATTTGCTTTGCTATATTGTAGAACTGGGATATTTGTTGATTCCTGTTCTTCAAAATTTTATAGAAAGATATGGTCAGGGAATATTACTCCTCTTTAGTTCATTGTTTTCCTACCTGCCAGTCAAAAATTAGTATTAGATTAATGTTTTGTGGTGGAAACATGCAGTTTTTGCTGATTTAGAAGAAATCATTGGAGAGGAATGTAAAATTTGCGATAGAATTTGGAGTTGTAGAGACGTGGTAATGGAGTGAATATTCTGGACATTGAACTAATGCTATCCCTGTTTTTCTTTTAAGAATAACGTGTTCATTGTGGCTGTATTGTTGGTCGAGCCATATCTTATTGCATTCTTGTGTTTGTGCTCTCCGAGTGAGTGATGTGTGCGGATAGCATTCTGAAAGTTGAATAGATTGTCATGTCTATTATTGTTAGTTGCAAAGATTTGGCACTGATTAAGGGAATTATTGAAGGAGACTGCCTTAATGTAGTTGTCTACATGTTAACTAATACCTAATACCATTATAACAGCCCAAGTCCACCGCTAGCAAATATTGTCCTCTTTGGGCTTCCCCTCAAGGTTTTTAAAACGCGTCTGCTAGGAAGAGGTTTTCACACCCTAATAAATAATACTTCATTCTCCCCAACCGATGTGGGATCTCACAATCCAGCGTCCTCGCTGGCACTCGTTCCCTTCTCCAATCGATGTGGGACCCCCCAATCTACCCTCCTTCAGAACCTAGTGTCCTTGCTGGCACACCGCCTCGTATCCACCTCTTTCAAGGCTTAGCCTTCTCGTTGGCACATCGCCCAATGTCTAGTTCTGATTTCATTTGTAATATGGTAATTTCTCCTTCCCACCCCAAATGGTGCAAAATTACTAGTCACCTTGGGGTAACCTCCTTGAATAATTAAGATCTTATGCATTCTCACATCTTTGGAATCAACTTATATCAATAAGATGAGTATTCATGTTTAAACTCTAACCTTCATGATTTTTATTCAAATTACAATGCATTTTTCTTTGATATTTCACCAGGCTGCTTTGCATTCGTCAGAATTTTATATTATTATATGGAAGTTCTTCATAATCTAGCCATAGTTACAAGTCATATGTTTTTAATAAGAGGTTGCATCTTTGGATTGTCAATAATTTCAGAATGAAGCACAGAATCTTCAGCTTGAAGACGGGGAACTAAGGGCAACATCATAGATTTAGCAATAAAGAAATATCGTGGCAAGAGTCTGGCTTTGCTGGCCTGGTAAATTTTCTCTACTACTTGTGGATTGCTTTTATTTTGTATAGTCTTTGTTTCCTGATAGTCCTGTCTGATGGGGAAAGGAGGCTAAAATAGCTCACAGAAGTATTTAGCCTCCAATCCTTCCAAGTAGAATTCTGAATTTGAGGGAGGGAGATTGTTGTAGAAATATTTAGCCTCCAATCCTTCAAATCTATACTATTATCTGAGTTTAAGTGAGGGAGATTGTTGCAAGTTTCTTTTTAATCTCTATATGAAGTATATTACTGGTTCTGGCTGTGGTTGGTTTTGGCTACTCACATAAAGAAGTGTTGTTTTTGTTGTCTTGTCCTTATAGCCATAAAATTTTTGCTTGTAAATGTACATTGCAAAAGTGATCTTTTAGTAGTTAAAGAGGTTTCACATGTATCTTATATAGCTGACATTTTCATTCATTTGATGTTTATATATAGATTCATATTATTCTTCAATTACCATTCACATGTAAATTGTATTATGAAGTTTAAAGACACATAATTTTGTAGGAAAAAAGGAAAAGGAATCGTATTCAGGTGCAAGAACCAATCGATGAAGATTAAGAAAAAGGCTATTCAATTGGCATGAATTTAGGTATAGGATGATGGGTACAATAATTTACTTGTTGACCAATTTTATTATAGTTATTTCAAATGTCTTGTGGTTCTTTTCTCGTCTTCAAAACTCTTTTACTTTTCCATTCCAGCCACGCTCGGTTGATTGACGCTCTTCTAGGCTTATCTTGCATATAAATTCTCGGATCCCAAGTCCCAAATCCTACGTCCGTTGAGAACATTTCGATTTTGACTTGGACAAAATTGCAAGTACGAGAACAAGTATGATATATATATATATAAAAAAAGAAAAAACATGAAAGGCAATTATCAAAGGTTTGCTTACAGTGTAGAACACAATTTTGAGGCATTCAATCAAAAATTACAGGATCGATGATCTCAATGAGTCCAGTCTCCATTTTGTGACTGATTATTATCAACAGTTAGAATTAAAGTTTGACTGACTAAATCCA

mRNA sequence

TCAACCTCTGAATACATTTCTCAAAAACCTGATTCCCTCATTCTTCTTCGTCAATTTCCACCATGATCCTCTCTATCTCTTCCCCTTTCTCACTCCTCTCTTTCATCCTATTCTTCGCCACTCCTCTCATCGCCGCTCCTGAGCCATCCACCATCTACGATCATCTGCATCGTCATGGCCTCCCCATTGGCCTCCTCCCCAAGAACATTACCAGATTCTCAATCGACTCTTCCACCGGCCGTTTTCAGGTCTTCCTCGACCAGCCCTGCAATGCCAAGTTCGAGAATGAGGTTCACTATGATTTCAACGTCTCCGGCAGGCTCGCCTACGGCCAGATCGCTGAATTGGCTGGAATTTCTTCGCAGGAGCTCTTTCTTTGGTTTCCTGTTAAGGGAATTCGTGTCGATTTGCACACCTCTGGTGTAATACATTTCGACGTCGGCGTTGTTGACAAACAGTTCTCTCTTTCTCTGTTTGAATCCCCGCCTGATTGCACTGCGGCTGATCCGGTTGATCGATCCGTCGCGTTGGATGGAGTTTCTCTCGGTTTGGATGGGGCGTTTTCATGAATGAAGCACAGAATCTTCAGCTTGAAGACGGGGAACTAAGGGCAACATCATAGATTTAGCAATAAAGAAATATCGTGGCAAGAGTCTGGCTTTGCTGGCCTGGAAAAAAGGAAAAGGAATCGTATTCAGGTGCAAGAACCAATCGATGAAGATTAAGAAAAAGGCTATTCAATTGGCATGAATTTAGGTATAGGATGATGGGTACAATAATTTACTTGTTGACCAATTTTATTATAGTTATTTCAAATGTCTTGTGGTTCTTTTCTCGTCTTCAAAACTCTTTTACTTTTCCATTCCAGCCACGCTCGGTTGATTGACGCTCTTCTAGGCTTATCTTGCATATAAATTCTCGGATCCCAAGTCCCAAATCCTACGTCCGTTGAGAACATTTCGATTTTGACTTGGACAAAATTGCAAGTACGAGAACAAGTATGATATATATATATATAAAAAAAGAAAAAACATGAAAGGCAATTATCAAAGGTTTGCTTACAGTGTAGAACACAATTTTGAGGCATTCAATCAAAAATTACAGGATCGATGATCTCAATGAGTCCAGTCTCCATTTTGTGACTGATTATTATCAACAGTTAGAATTAAAGTTTGACTGACTAAATCCA

Coding sequence (CDS)

ATGATCCTCTCTATCTCTTCCCCTTTCTCACTCCTCTCTTTCATCCTATTCTTCGCCACTCCTCTCATCGCCGCTCCTGAGCCATCCACCATCTACGATCATCTGCATCGTCATGGCCTCCCCATTGGCCTCCTCCCCAAGAACATTACCAGATTCTCAATCGACTCTTCCACCGGCCGTTTTCAGGTCTTCCTCGACCAGCCCTGCAATGCCAAGTTCGAGAATGAGGTTCACTATGATTTCAACGTCTCCGGCAGGCTCGCCTACGGCCAGATCGCTGAATTGGCTGGAATTTCTTCGCAGGAGCTCTTTCTTTGGTTTCCTGTTAAGGGAATTCGTGTCGATTTGCACACCTCTGGTGTAATACATTTCGACGTCGGCGTTGTTGACAAACAGTTCTCTCTTTCTCTGTTTGAATCCCCGCCTGATTGCACTGCGGCTGATCCGGTTGATCGATCCGTCGCGTTGGATGGAGTTTCTCTCGGTTTGGATGGGGCGTTTTCATGA

Protein sequence

MILSISSPFSLLSFILFFATPLIAAPEPSTIYDHLHRHGLPIGLLPKNITRFSIDSSTGRFQVFLDQPCNAKFENEVHYDFNVSGRLAYGQIAELAGISSQELFLWFPVKGIRVDLHTSGVIHFDVGVVDKQFSLSLFESPPDCTAADPVDRSVALDGVSLGLDGAFS

Homology

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BLAST of Carg25818 vs. NCBI nr
Match: XP_022946011.1 (uncharacterized protein LOC111450229 [Cucurbita moschata])

HSP 1 Score: 335.5 bits (859), Expect = 1.0e-88
Identity = 165/168 (98.21%), Postives = 168/168 (100.00%), Query Frame = 0


Query: 1   MILSISSPFSLLSFILFFATPLIAAPEPSTIYDHLHRHGLPIGLLPKNITRFSIDSSTGR 60
           MILSISSPFSLLSFILFFA+PLIAAPEP+TIYDHLHRHGLPIGLLPKNITRFSIDSSTGR
Sbjct: 1   MILSISSPFSLLSFILFFASPLIAAPEPATIYDHLHRHGLPIGLLPKNITRFSIDSSTGR 60

Query: 61  FQVFLDQPCNAKFENEVHYDFNVSGRLAYGQIAELAGISSQELFLWFPVKGIRVDLHTSG 120
           FQVFLDQPCNAKFENEVHYDFNVSGRLAYGQIAELAGISSQELFLWFPVKGIRVDLHTSG
Sbjct: 61  FQVFLDQPCNAKFENEVHYDFNVSGRLAYGQIAELAGISSQELFLWFPVKGIRVDLHTSG 120

Query: 121 VIHFDVGVVDKQFSLSLFESPPDCTAADPVDRSVALDGVSLGLDGAFS 169
           VIHFDVGVVDKQFSLSLFESPPDCTAADPVD+SVALDGVSLGLDGAFS
Sbjct: 121 VIHFDVGVVDKQFSLSLFESPPDCTAADPVDQSVALDGVSLGLDGAFS 168

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BLAST of Carg25818 vs. NCBI nr
Match: XP_022949506.1 (uncharacterized protein LOC111452833 [Cucurbita moschata] >XP_023524763.1 uncharacterized protein LOC111788601 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 282.7 bits (722), Expect = 8.0e-73
Identity = 136/158 (86.08%), Postives = 147/158 (93.04%), Query Frame = 0


Query: 11  LLSFILFFATPLIAAPEPSTIYDHLHRHGLPIGLLPKNITRFSIDSSTGRFQVFLDQPCN 70
           LL+F+LFFA+PL+AA +PSTIYDHLH HGLPIGLLPKNITRFSIDSSTGRFQVFLDQPCN
Sbjct: 4   LLAFLLFFASPLMAASDPSTIYDHLHLHGLPIGLLPKNITRFSIDSSTGRFQVFLDQPCN 63

Query: 71  AKFENEVHYDFNVSGRLAYGQIAELAGISSQELFLWFPVKGIRVDLHTSGVIHFDVGVVD 130
           AKFENEVHYDFNVSGRL+YGQIAELAGISSQELFLWFPVKGI VDL +SG+IHFDVGVVD
Sbjct: 64  AKFENEVHYDFNVSGRLSYGQIAELAGISSQELFLWFPVKGIHVDLSSSGLIHFDVGVVD 123

Query: 131 KQFSLSLFESPPDCTAADPVDRSVALDGVSLGLDGAFS 169
           KQFSLSLFESPPDCTAADPVD S  L+G S+ L+ A S
Sbjct: 124 KQFSLSLFESPPDCTAADPVDHSFELNGASVDLNVAIS 161

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BLAST of Carg25818 vs. NCBI nr
Match: XP_022998326.1 (uncharacterized protein LOC111492997 [Cucurbita maxima])

HSP 1 Score: 280.8 bits (717), Expect = 3.0e-72
Identity = 135/158 (85.44%), Postives = 147/158 (93.04%), Query Frame = 0


Query: 11  LLSFILFFATPLIAAPEPSTIYDHLHRHGLPIGLLPKNITRFSIDSSTGRFQVFLDQPCN 70
           LL+F+LFFA+PL+AA +PSTIYDHLH HGLPIGLLPK+ITRFSIDSSTGRFQVFLDQPCN
Sbjct: 4   LLAFLLFFASPLMAASDPSTIYDHLHLHGLPIGLLPKDITRFSIDSSTGRFQVFLDQPCN 63

Query: 71  AKFENEVHYDFNVSGRLAYGQIAELAGISSQELFLWFPVKGIRVDLHTSGVIHFDVGVVD 130
           AKFENEVHYDFNVSGRL+YGQIAELAGISSQELFLWFPVKGI VDL +SG+IHFDVGVVD
Sbjct: 64  AKFENEVHYDFNVSGRLSYGQIAELAGISSQELFLWFPVKGIHVDLSSSGLIHFDVGVVD 123

Query: 131 KQFSLSLFESPPDCTAADPVDRSVALDGVSLGLDGAFS 169
           KQFSLSLFESPPDCTAADPVD S  L+G S+ L+ A S
Sbjct: 124 KQFSLSLFESPPDCTAADPVDHSFELNGASVDLNVAIS 161

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BLAST of Carg25818 vs. NCBI nr
Match: XP_004138912.1 (PREDICTED: uncharacterized protein LOC101222871 [Cucumis sativus] >KGN61366.1 hypothetical protein Csa_2G99990 [Cucumis sativus])

HSP 1 Score: 275.8 bits (704), Expect = 9.8e-71
Identity = 136/168 (80.95%), Postives = 148/168 (88.10%), Query Frame = 0


Query: 1   MILSISSPFSLLSFILFFATPLIAAPEPSTIYDHLHRHGLPIGLLPKNITRFSIDSSTGR 60
           M L + SPF ++ F  FFA+P I A +PSTIYDHLH +GLPIGLLPKNIT+FSIDSSTGR
Sbjct: 24  MTLFLFSPFFIILF--FFASPFITASDPSTIYDHLHLYGLPIGLLPKNITKFSIDSSTGR 83

Query: 61  FQVFLDQPCNAKFENEVHYDFNVSGRLAYGQIAELAGISSQELFLWFPVKGIRVDLHTSG 120
           FQVFLDQPCNAKFENEVHYDFNVSGRL+YGQIAELAGISSQELFLWFPVKGIRVDL TSG
Sbjct: 84  FQVFLDQPCNAKFENEVHYDFNVSGRLSYGQIAELAGISSQELFLWFPVKGIRVDLSTSG 143

Query: 121 VIHFDVGVVDKQFSLSLFESPPDCTAADPVDRSVALDGVSLGLDGAFS 169
           +IHFDVGVVDKQFSLSLFESP DCTAADPVDRS+A +  SL +D   S
Sbjct: 144 LIHFDVGVVDKQFSLSLFESPIDCTAADPVDRSIAFNAASLDMDRPLS 189

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BLAST of Carg25818 vs. NCBI nr
Match: XP_008441719.1 (PREDICTED: uncharacterized protein LOC103485796 [Cucumis melo])

HSP 1 Score: 270.8 bits (691), Expect = 3.2e-69
Identity = 136/168 (80.95%), Postives = 143/168 (85.12%), Query Frame = 0


Query: 1   MILSISSPFSLLSFILFFATPLIAAPEPSTIYDHLHRHGLPIGLLPKNITRFSIDSSTGR 60
           M L + SPF           PLIAAP+PSTIYDHLH HGLPIGLLPKNIT+FSIDSSTGR
Sbjct: 1   MTLFLFSPF-XXXXXXXXXXPLIAAPDPSTIYDHLHLHGLPIGLLPKNITKFSIDSSTGR 60

Query: 61  FQVFLDQPCNAKFENEVHYDFNVSGRLAYGQIAELAGISSQELFLWFPVKGIRVDLHTSG 120
           F VFLDQPCNAKFENEVHYDFNVSGRL+YGQIAELAGISSQELFLWFPVKGIRVDL +SG
Sbjct: 61  FHVFLDQPCNAKFENEVHYDFNVSGRLSYGQIAELAGISSQELFLWFPVKGIRVDLSSSG 120

Query: 121 VIHFDVGVVDKQFSLSLFESPPDCTAADPVDRSVALDGVSLGLDGAFS 169
           VIHFDVGVVDKQFSLSLFESPPDCTAADPVD+S A +  SL  D  FS
Sbjct: 121 VIHFDVGVVDKQFSLSLFESPPDCTAADPVDQSFAFNAASLDTDRPFS 167

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BLAST of Carg25818 vs. TAIR10
Match: AT5G16380.1 (Protein of unknown function, DUF538)

HSP 1 Score: 171.0 bits (432), Expect = 6.2e-43
Identity = 85/146 (58.22%), Postives = 106/146 (72.60%), Query Frame = 0


Query: 11  LLSFILFFATPLIAAPEPSTIYDHLHRHGLPIGLLPKNITRFSIDSSTGRFQVFLDQPCN 70
           L S ILF    L + P+PS  YD+L    LP G++PK +T FSID  TGRF V L  PC+
Sbjct: 14  LFSSILF--PQLSSLPDPS-FYDYLRESNLPAGIVPKGVTNFSIDIKTGRFTVALPVPCD 73

Query: 71  AKFENEVHYDFNVSGRLAYGQIAELAGISSQELFLWFPVKGIRVDLHTSGVIHFDVGVVD 130
           AKFEN+ H+D+N+SG L+ G+I  L+G++ +ELFLWF VKGI VD  +SG+IHFDVGV D
Sbjct: 74  AKFENQFHFDYNISGVLSDGRIGNLSGVTQKELFLWFAVKGIHVDPQSSGLIHFDVGVAD 133

Query: 131 KQFSLSLFESPPDCTAADPVDRSVAL 157
           KQ SLSLFESP DCTAA+   R+V L
Sbjct: 134 KQLSLSLFESPRDCTAAESQPRAVDL 156

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BLAST of Carg25818 vs. TAIR10
Match: AT3G07470.1 (Protein of unknown function, DUF538)

HSP 1 Score: 162.2 bits (409), Expect = 2.9e-40
Identity = 72/121 (59.50%), Postives = 94/121 (77.69%), Query Frame = 0


Query: 24  AAPEPSTIYDHLHRHGLPIGLLPKNITRFSIDSSTGRFQVFLDQPCNAKFENEVHYDFNV 83
           A  E  TIY+ L  +GLP G+ PK +  F+ D  TGRF V+L+Q C AK+E E+HYD N+
Sbjct: 24  AISETETIYEILLANGLPSGIFPKGVREFTFDVETGRFSVYLNQACEAKYETEIHYDANI 83

Query: 84  SGRLAYGQIAELAGISSQELFLWFPVKGIRVDLHTSGVIHFDVGVVDKQFSLSLFESPPD 143
           +G +   QI++L+GIS+QELFLWFPVKGIRVD+ +SG+I+FDVGVV KQ+SLSLFE+P D
Sbjct: 84  TGTIGSAQISDLSGISAQELFLWFPVKGIRVDVPSSGLIYFDVGVVRKQYSLSLFETPRD 143

Query: 144 C 145
           C
Sbjct: 144 C 144

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BLAST of Carg25818 vs. TAIR10
Match: AT3G07460.2 (Protein of unknown function, DUF538)

HSP 1 Score: 150.6 bits (379), Expect = 8.6e-37
Identity = 74/138 (53.62%), Postives = 99/138 (71.74%), Query Frame = 0


Query: 10  SLLSFILFFATPLIAA-PEPSTIYDHLHRHGLPIGLLPKNITRFSIDSSTGRFQVFLDQP 69
           +LL F+L     + A   E  +I + L  +GLP+GL PK +  F+++  TGRF V+L+Q 
Sbjct: 8   TLLCFVLAAGISISAVIAENESIDEILLANGLPLGLFPKGVKGFTVNGETGRFSVYLNQS 67

Query: 70  CNAKFENEVHYDFNVSGRLAYGQIAELAGISSQELFLWFPVKGIRVDLHTSGVIHFDVGV 129
           C AK+E E+HYD  VSG + Y QI +L+GIS+QELFLW  VKGIRVD+ +SG+I FDVGV
Sbjct: 68  CQAKYETELHYDEIVSGTIGYAQIRDLSGISAQELFLWLQVKGIRVDVPSSGLIFFDVGV 127

Query: 130 VDKQFSLSLFESPPDCTA 147
           + KQ+SLSLFE+P DC A
Sbjct: 128 LRKQYSLSLFETPRDCVA 145

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BLAST of Carg25818 vs. TAIR10
Match: AT1G61667.1 (Protein of unknown function, DUF538)

HSP 1 Score: 127.1 bits (318), Expect = 1.0e-29
Identity = 59/130 (45.38%), Postives = 80/130 (61.54%), Query Frame = 0


Query: 15  ILFFATPLIAAPEPSTIYDHLHRHGLPIGLLPKNITRFSIDSSTGRFQVFLDQPCNAKFE 74
           +L    P I     S+I + L   GLP GL P N+  +S+D  TG  +V L  PC A+FE
Sbjct: 6   LLLLLVPFITPSSQSSIRNLLEARGLPGGLFPDNVESYSLDDKTGELEVQLQNPCFARFE 65

Query: 75  NEVHYDFNVSGRLAYGQIAELAGISSQELFLWFPVKGIRVDLHTSGVIHFDVGVVDKQFS 134
           N V++D  +   L+YG +  L G++ +ELFLW PVKGI V+  +SG++ FD+GV  KQ S
Sbjct: 66  NRVYFDRVIKANLSYGGLVGLEGLTQEELFLWLPVKGIAVNDPSSGLVLFDIGVAHKQIS 125

Query: 135 LSLFESPPDC 145
            SLFE PP C
Sbjct: 126 RSLFEDPPVC 135

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BLAST of Carg25818 vs. TAIR10
Match: AT5G54530.1 (Protein of unknown function, DUF538)

HSP 1 Score: 122.1 bits (305), Expect = 3.3e-28
Identity = 63/139 (45.32%), Postives = 86/139 (61.87%), Query Frame = 0


Query: 11  LLSFILFFATPL-----IAAPEPSTIYDHLHRHGLPIGLLPKNITRFSIDSSTGRFQVFL 70
           L+S ++   T L     +++P   T++D L   GLP GLLP+ +  + + +  GR +VFL
Sbjct: 4   LISRMILLLTTLRLSLSLSSPSYPTVHDVLRSEGLPAGLLPQEVDSYILHND-GRLEVFL 63

Query: 71  DQPCNAKFENEVHYDFNVSGRLAYGQIAELAGISSQELFLWFPVKGIRVDLHTSGVIHFD 130
             PC AKFE  VH++  V G L+YG +  + G+S +ELFLW  VK I V+   SGVI FD
Sbjct: 64  AAPCYAKFETNVHFEAVVRGNLSYGSLVGVEGLSQKELFLWLQVKDIVVENPNSGVIVFD 123

Query: 131 VGVVDKQFSLSLFESPPDC 145
           +GV  KQ SLSLFE PP C
Sbjct: 124 IGVAFKQLSLSLFEDPPKC 141

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BLAST of Carg25818 vs. Swiss-Prot
Match: sp|Q9M015|Y5161_ARATH (Uncharacterized protein At5g01610 OS=Arabidopsis thaliana OX=3702 GN=At5g01610 PE=1 SV=1)

HSP 1 Score: 46.6 bits (109), Expect = 3.2e-04
Identity = 23/96 (23.96%), Postives = 47/96 (48.96%), Query Frame = 0


Query: 35  LHRHGLPIGLLPKNITRFSIDSSTGRFQVFLDQPCNAKFENE--VHYDFNVSGRLAYGQI 94
           L  + LPIG+ P + T +  D  T +  V +   C   +++   + +   V+G L  G++
Sbjct: 58  LKEYDLPIGIFPGDATNYEFDEETKKLTVLIPSICEVGYKDSSVLKFTTTVTGHLEKGKL 117

Query: 95  AELAGISSQELFLWFPVKGIRVDLHTSGVIHFDVGV 129
            ++ GI + ++ +W  V  I  D   +  ++F  G+
Sbjct: 118 TDVEGIKT-KVMIWVKVTSISTD---ASKVYFTAGM 149

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BLAST of Carg25818 vs. TrEMBL
Match: tr|A0A0A0LN19|A0A0A0LN19_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G99990 PE=4 SV=1)

HSP 1 Score: 275.8 bits (704), Expect = 6.5e-71
Identity = 136/168 (80.95%), Postives = 148/168 (88.10%), Query Frame = 0


Query: 1   MILSISSPFSLLSFILFFATPLIAAPEPSTIYDHLHRHGLPIGLLPKNITRFSIDSSTGR 60
           M L + SPF ++ F  FFA+P I A +PSTIYDHLH +GLPIGLLPKNIT+FSIDSSTGR
Sbjct: 24  MTLFLFSPFFIILF--FFASPFITASDPSTIYDHLHLYGLPIGLLPKNITKFSIDSSTGR 83

Query: 61  FQVFLDQPCNAKFENEVHYDFNVSGRLAYGQIAELAGISSQELFLWFPVKGIRVDLHTSG 120
           FQVFLDQPCNAKFENEVHYDFNVSGRL+YGQIAELAGISSQELFLWFPVKGIRVDL TSG
Sbjct: 84  FQVFLDQPCNAKFENEVHYDFNVSGRLSYGQIAELAGISSQELFLWFPVKGIRVDLSTSG 143

Query: 121 VIHFDVGVVDKQFSLSLFESPPDCTAADPVDRSVALDGVSLGLDGAFS 169
           +IHFDVGVVDKQFSLSLFESP DCTAADPVDRS+A +  SL +D   S
Sbjct: 144 LIHFDVGVVDKQFSLSLFESPIDCTAADPVDRSIAFNAASLDMDRPLS 189

[Close]

BLAST of Carg25818 vs. TrEMBL
Match: tr|A0A1S3B435|A0A1S3B435_CUCME (uncharacterized protein LOC103485796 OS=Cucumis melo OX=3656 GN=LOC103485796 PE=4 SV=1)

HSP 1 Score: 270.8 bits (691), Expect = 2.1e-69
Identity = 136/168 (80.95%), Postives = 143/168 (85.12%), Query Frame = 0


Query: 1   MILSISSPFSLLSFILFFATPLIAAPEPSTIYDHLHRHGLPIGLLPKNITRFSIDSSTGR 60
           M L + SPF           PLIAAP+PSTIYDHLH HGLPIGLLPKNIT+FSIDSSTGR
Sbjct: 1   MTLFLFSPF-XXXXXXXXXXPLIAAPDPSTIYDHLHLHGLPIGLLPKNITKFSIDSSTGR 60

Query: 61  FQVFLDQPCNAKFENEVHYDFNVSGRLAYGQIAELAGISSQELFLWFPVKGIRVDLHTSG 120
           F VFLDQPCNAKFENEVHYDFNVSGRL+YGQIAELAGISSQELFLWFPVKGIRVDL +SG
Sbjct: 61  FHVFLDQPCNAKFENEVHYDFNVSGRLSYGQIAELAGISSQELFLWFPVKGIRVDLSSSG 120

Query: 121 VIHFDVGVVDKQFSLSLFESPPDCTAADPVDRSVALDGVSLGLDGAFS 169
           VIHFDVGVVDKQFSLSLFESPPDCTAADPVD+S A +  SL  D  FS
Sbjct: 121 VIHFDVGVVDKQFSLSLFESPPDCTAADPVDQSFAFNAASLDTDRPFS 167

[Close]

BLAST of Carg25818 vs. TrEMBL
Match: tr|A0A2P5EUA5|A0A2P5EUA5_9ROSA (Uncharacterized protein OS=Trema orientalis OX=63057 GN=TorRG33x02_149700 PE=4 SV=1)

HSP 1 Score: 211.1 bits (536), Expect = 2.0e-51
Identity = 100/137 (72.99%), Postives = 114/137 (83.21%), Query Frame = 0


Query: 28  PSTIYDHLHRHGLPIGLLPKNITRFSIDSSTGRFQVFLDQPCNAKFENEVHYDFNVSGRL 87
           PSTIYD+L  HGLPIGL PK IT FS D STG FQV L QPCNAKFEN+VHYDFNVSG L
Sbjct: 51  PSTIYDYLKLHGLPIGLFPKGITEFSHDPSTGCFQVLLSQPCNAKFENQVHYDFNVSGTL 110

Query: 88  AYGQIAELAGISSQELFLWFPVKGIRVDLHTSGVIHFDVGVVDKQFSLSLFESPPDCTAA 147
           ++GQI  L+G+S+QELFLWFPVKGIRVD+ +SG+I+FDVGVVDKQFSLSLFESPPDCTAA
Sbjct: 111 SFGQIGNLSGVSAQELFLWFPVKGIRVDVPSSGLIYFDVGVVDKQFSLSLFESPPDCTAA 170

Query: 148 DPVDRSVALDGVSLGLD 165
           +P D  +A D  +   D
Sbjct: 171 EPSD--LASDDAATAFD 185

[Close]

BLAST of Carg25818 vs. TrEMBL
Match: tr|A0A067K3P8|A0A067K3P8_JATCU (Uncharacterized protein OS=Jatropha curcas OX=180498 GN=JCGZ_18043 PE=4 SV=1)

HSP 1 Score: 208.4 bits (529), Expect = 1.3e-50
Identity = 99/156 (63.46%), Postives = 127/156 (81.41%), Query Frame = 0


Query: 5   ISSPFSLLSFILFFATPL-IAAPEPSTIYDHLHRHGLPIGLLPKNITRFSIDSSTGRFQV 64
           + +P   ++F+LF    L ++A   S+IYDHL  +GLPIGLLP+ IT FS+D++TG FQV
Sbjct: 11  LHAPTLSITFLLFLTCHLPLSAASQSSIYDHLRLNGLPIGLLPQGITDFSLDATTGHFQV 70

Query: 65  FLDQPCNAKFENEVHYDFNVSGRLAYGQIAELAGISSQELFLWFPVKGIRVDLHTSGVIH 124
            L QPCNAKFEN++HYDFN+SG L++G+I EL+G+S QELFLWFPVKGIRVD+ +SG+I+
Sbjct: 71  NLTQPCNAKFENQLHYDFNISGLLSFGKIGELSGVSQQELFLWFPVKGIRVDVPSSGLIY 130

Query: 125 FDVGVVDKQFSLSLFESPPDCTAADPVDRSVALDGV 160
           FDVGVVDKQFSLSLFE+P +CTAADP DR V   G+
Sbjct: 131 FDVGVVDKQFSLSLFENPTECTAADPGDRPVDSPGM 166

[Close]

BLAST of Carg25818 vs. TrEMBL
Match: tr|A0A2P5CDH9|A0A2P5CDH9_PARAD (Uncharacterized protein OS=Parasponia andersonii OX=3476 GN=PanWU01x14_162380 PE=4 SV=1)

HSP 1 Score: 208.0 bits (528), Expect = 1.7e-50
Identity = 98/137 (71.53%), Postives = 114/137 (83.21%), Query Frame = 0


Query: 28  PSTIYDHLHRHGLPIGLLPKNITRFSIDSSTGRFQVFLDQPCNAKFENEVHYDFNVSGRL 87
           PSTIYD+L  HGLPIGL PK IT FS D STG F+V L+QPCNAKFEN+VHYDFNVSG L
Sbjct: 52  PSTIYDYLKLHGLPIGLFPKGITEFSHDPSTGCFEVLLNQPCNAKFENQVHYDFNVSGTL 111

Query: 88  AYGQIAELAGISSQELFLWFPVKGIRVDLHTSGVIHFDVGVVDKQFSLSLFESPPDCTAA 147
           ++ QI  L+G+S+QELFLWFPVKGIRVD+ +SG+I+FDVGVVDKQFSLSLFESPPDCTAA
Sbjct: 112 SFSQIGNLSGVSAQELFLWFPVKGIRVDVPSSGLIYFDVGVVDKQFSLSLFESPPDCTAA 171

Query: 148 DPVDRSVALDGVSLGLD 165
           +P D  +A D  +   D
Sbjct: 172 EPSD--LASDDAATAFD 186

The following BLAST results are available for this feature:

BLAST of Carg25818 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022946011.1	1.0e-88	98.21	uncharacterized protein LOC111450229 [Cucurbita moschata]	[more]
XP_022949506.1	8.0e-73	86.08	uncharacterized protein LOC111452833 [Cucurbita moschata] >XP_023524763.1 unchar...	[more]
XP_022998326.1	3.0e-72	85.44	uncharacterized protein LOC111492997 [Cucurbita maxima]	[more]
XP_004138912.1	9.8e-71	80.95	PREDICTED: uncharacterized protein LOC101222871 [Cucumis sativus] >KGN61366.1 hy...	[more]
XP_008441719.1	3.2e-69	80.95	PREDICTED: uncharacterized protein LOC103485796 [Cucumis melo]	[more]

BLAST of Carg25818 vs. TAIR10


Match Name	E-value	Identity	Description
AT5G16380.1	6.2e-43	58.22	Protein of unknown function, DUF538	[more]
AT3G07470.1	2.9e-40	59.50	Protein of unknown function, DUF538	[more]
AT3G07460.2	8.6e-37	53.62	Protein of unknown function, DUF538	[more]
AT1G61667.1	1.0e-29	45.38	Protein of unknown function, DUF538	[more]
AT5G54530.1	3.3e-28	45.32	Protein of unknown function, DUF538	[more]

BLAST of Carg25818 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|Q9M015\|Y5161_ARATH	3.2e-04	23.96	Uncharacterized protein At5g01610 OS=Arabidopsis thaliana OX=3702 GN=At5g01610 P...	[more]

BLAST of Carg25818 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A0A0LN19\|A0A0A0LN19_CUCSA	6.5e-71	80.95	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G99990 PE=4 SV=1	[more]
tr\|A0A1S3B435\|A0A1S3B435_CUCME	2.1e-69	80.95	uncharacterized protein LOC103485796 OS=Cucumis melo OX=3656 GN=LOC103485796 PE=...	[more]
tr\|A0A2P5EUA5\|A0A2P5EUA5_9ROSA	2.0e-51	72.99	Uncharacterized protein OS=Trema orientalis OX=63057 GN=TorRG33x02_149700 PE=4 S...	[more]
tr\|A0A067K3P8\|A0A067K3P8_JATCU	1.3e-50	63.46	Uncharacterized protein OS=Jatropha curcas OX=180498 GN=JCGZ_18043 PE=4 SV=1	[more]
tr\|A0A2P5CDH9\|A0A2P5CDH9_PARAD	1.7e-50	71.53	Uncharacterized protein OS=Parasponia andersonii OX=3476 GN=PanWU01x14_162380 PE...	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR007493	DUF538
IPR036758	At5g01610-like

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg25818-RA	Carg25818-RA	mRNA

InterPro

Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR036758	At5g01610-like superfamily	GENE3D	G3DSA:2.30.240.10		coord: 21..148 e-value: 1.3E-27 score: 98.3
IPR036758	At5g01610-like superfamily	SUPERFAMILY	SSF141562	At5g01610-like	coord: 6..146
IPR007493	Protein of unknown function DUF538	PFAM	PF04398	DUF538	coord: 31..139 e-value: 8.5E-31 score: 106.6
IPR007493	Protein of unknown function DUF538	PANTHER	PTHR31676	FAMILY NOT NAMED	coord: 10..151
None	No IPR available	PANTHER	PTHR31676:SF8	SUBFAMILY NOT NAMED	coord: 10..151

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Carg25818	Csa2G99990	Cucumber (Chinese Long) v2	carcuB1082
Carg25818	MELO3C008555	Melon (DHL92) v3.5.1	carmeB1037
Carg25818	CSPI02G08190	Wild cucumber (PI 183967)	carcpiB1104
Carg25818	Cucsa.189490	Cucumber (Gy14) v1	carcgyB1186
Carg25818	CmoCh05G008620	Cucurbita moschata (Rifu)	carcmoB1434
Carg25818	Lsi11G009660	Bottle gourd (USVL1VR-Ls)	carlsiB975
Carg25818	Cp4.1LG02g12300	Cucurbita pepo (Zucchini)	carcpeB1487
Carg25818	Cp4.1LG11g07120	Cucurbita pepo (Zucchini)	carcpeB1485
Carg25818	CsGy2G008450	Cucumber (Gy14) v2	carcgybB1050
Carg25818	MELO3C008555.2	Melon (DHL92) v3.6.1	carmedB1051
Carg25818	CsaV3_2G010570	Cucumber (Chinese Long) v3	carcucB1115
Carg25818	Cla97C11G216080	Watermelon (97103) v2	carwmbB1126
Carg25818	Bhi06G000779	Wax gourd	carwgoB1255

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:

None