Carg25814 (gene) Silver-seed gourd | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Carg25814
Type	gene
Organism	Cucurbita argyrosperma (Silver-seed gourd)
Description	RING/FYVE/PHD zinc finger superfamily protein
Location	Cucurbita_argyrosperma_scaffold_332 : 53441 .. 57090 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATTCCGCACCTAACGCGTTTTCTCTTCCTCTTCCACCTTTCTTTTTCCTTTTCTCCTTCATTTTTTGTCTTCTCAATTCACTCTATTCCTCTTCTTTCTAGTTTCATCCCTGCAATTCTTACCATTCGCCTCTGTAGGCTTTCTTTCTTTTCTTGAATTGATCGCCTGAGTTGGGTTTTTGGTGATATAGGGGTTTTGAGGACAATGAGCGATCATCTTGTCCTGTATGTTGACCATTTGATTCCACCAGTTGCTCCAGTTCAGCCTGTGTCCGACCCGGTTGACCCGGTTCCTTCCGCACCGCGTGAGGGTGTTTCTGACTCGGCTGCGGCTATTCCTTCCTGTTCTACTGCCACTGCGGATGATCGGACGGTGGAGCAGGATGCACCCAATGAGGAGGACCCTCTGATTCAGGCGGCGGAGTGTCGCATTTGTCAGGAAGAAGACACTCTCAATAATTTAGAAACTCCCTGCGCATGTAGTGGTAGTCTTAAGGTATTGACGCCTCACCCTTTTCTGTTGCTTCTTAAATTTTTACGTGAATACACAGGGGACACCCTTTTACCCTAGTTTGTTGATTTGACTCTGTTTTCTTTCATGGCGTTGGATTTATGAATGCTGTTTTTGGAAACTTCGGATATAGTTCTTTCATACTGGTTCATTTGGGTTTAGTAACTTTCTTCTTTTTACTGTCTTTGGAATGGGTTCAAGTCTATGTTTATTGCTTTGATTTTTGTTTTTTTTTGGTCAATTTTTGTGTTGCTTCCAATGTGGTTTAGTTTTGGCGGAAGCAAGCTGGAAAAGGACATAAAAGAACAAGTTTATCTAGTATTTTCCAAAACTGTGATGGATGAGAGTTTGCCTGAATTCTACAGTGTCTTGTTTAGAATTGACATGCTCATATCTTGAGAGGATTTATATCGTTGATGTGGGGAGGATTTTTGTGTTGTTTGGTGGTCATTTGTTTTACTCTTTGTTTGGTCAATTGAATATTTCTTTATAAAATTTTCCCCAATGCTTCGTTTGTGACGTTTAATATCATCTCTCGTCTAATAGTTTCGTCACAAGAGTAACGCTTTTGCCTAAACTCTTCTGTTTGCATAAATTTCTATGATCGATGGGCAATTTTATGAGCTGTATGTGGGGGTATGTGCTGCGTCTGAGTTATAAAGTGGCTTGATAAAATTTGACACGAATTATGGTTATCATTCATGATGTCATGGTAGAATTATAGTGATCCATGAACTCTATTTTTTTTTTCTCTCCAGAATGTAACTAAGTTTGGTTATGCCCTTAGAATTGACCAATACGATCTAGTATAGGAAAATTTATCGGGCGTGCTTGTTTATTAATCTTTTGGCACGTGTCTGATGAATGTTTGTGTTCAGTATGCTCATAGGAAGTGCGTTCAACATTGGTGCAATGAGAAAGGAGACATAACTTGTGAGATATGTCATCAGGTATGCATGATGTTTTGATTTGATATTCGGCTATTATAGTATTATTTTGTAAAAAAATTTCAAATAAGTTGCTAATATTATCTTTATTCTTTAGCTTCCGTGCAAGTTTTCCTCCTAGTATATTTTTGTTGAACTCATTACTCTTTGAATTTTGAAAAAAGGCATGCTTTACACCGGTAGTTCAAAATTTTCATTATTAGTGATTTAAAATGTGCATAAAAAATGAACGCGTACGAATGAGAGGGAGAAAACCATATGATTCGCAATTTGCTAGGGTTGCTGTTGTAGGAGAAAACTGTAGGACTCGAGAACGAGACTTTGCTACTTTAGAAACCTCATGGATGATTGGAGACTCTTGCCCGTTTACTTCTCTTCGTACTTGTCTGATTGTCTCTACTCTCGACCAGTCTCTTTTGTCTATCCTCTCCGAGCCATACCTTTTGTTCGTCTTTTCCTTTGACACATCCATCTCTGAGAAAAGCATAACAGTGGTCAGTGGTTTACTATAGCGCACACAATGATTTGGATCTTTTTGCAATGGGCTGGATTCCTTTTCGGATAGTTTGAATCTGACATCATAGAAGATTGTTCCAAGTCATTGAGGAGAAGATGGGCAGCATGTGAATTGGTGGATTCTTCCCTTCCTCATGCTCAACCAAAAGTAATGTGAATGCTACTTCGAATATGCTGTCTGTCAGAGATGGTAGAGGTAAGGAGTGTCTACCATGAAGATGCAGGTTCATTAGTGTTGAAGTGTGATGATGGATGAGGCATTGATGTTTCCTCAGACTTATGTCTTAACACATATCTCTCGCTGTTGGAGCTTCGTTTGTTAAATGAAAAGTTGGTTCGATGTTTTAGTCTTTCCAAATTTTGAGCGTGGGGCTCTCGATTCAGGACATTGGACTCTTTTTTCTGCTCTGTCTGTGATTCTTTCCCCTTTATCTTTACGTGTTTCATGTTATGTTGAATGGTATCAATATCATGTGATTTTCATTTGCAGTTTCTTTTCTGATGATGTTTTTCTTGTTTCAATTCCTCATTGATTGATATTCCGGTACGCTTTATTCAATTGCCAGTCTTATCGACCTGGATATACTGCACCCCCTCGTTCTGAAGAAACTGTGATTGATATGGAGTAAGTTCAACCTTCTTGTTATTTGCAATTTGCATGTGAATGACTTTATCAATAATCATGCATCTGAACACCCACAACCGTTTTATTTTCATGTAATTTGTACACGCATTTGAAATATTGACCTGGATGTGGATATGCACAGGGGACGATGGACTATTGCTGGTAACCCGTTAGACCTTAGAGATACTCGGGTACTGGCCATTGCGGAGGCAGAACGTAATTTCTTGGAAGCCGAATATGATGATTATACTGCTTCAAATGATAGTGGAGCTGCATTTTGCCGATCAGCTGCCCTTATTGTAAGTTTTCTTATGTTAGTTCATAGAACTCTTGTATTTTCCATGAAACTCTGATGATTGATGAAGTATTTGATTTTACTGGCTAGCTATTAGCCCTTCTCCTTCTGCGACACGCATTGACCATAACTGATCCAGACGGTGATGATGACGCATCTGCCTTTTTCTCTGTAAGCGAGATGGGAATTCGTTTTCTTAAATTTGAAAGAACAATAGTATAATCGGAAGGATATTTATAATCTGGATGTACCTTTGACAGATTTTCTTGCTTCGTGCTGCTGGTTTTCTTCTACCATGTTACATCATGGCTTGGGCCATCAGTATCCTGCAACGTCGTCGACAAAGACAGGTTGGTTAGCGATTAAGTTCTTCGGGTGTATTTTTGAAAATTCTGTCTTAACAACTCTAGGTGTTGCCATCTCTTAAATAAGTAGATATTTTGGCATATATTGTAGAAAGCAAGGATGTCTGTGTAGGGGGTAGGCAAAATTGTTGGTCTCTAAGAATGTTGTTGACACTTAAAGTTTGGTGGTTGTGAACCAACAGGAGGCGGCAGCACTGGCTGCAACACAAGTGGCGTTTGTGCTACAACATGGACAGCATAGAGGTTTACAATTTGCAATTGCATCAGCAGGACCGCCCCTCACCCCTCACCCTCACCCTCACCCTCACCCACACCCACACCCTCATCCTCACCCTCACCCCCACCCACACCCACACCCTCCCCCTCACCCACACCCTCACCCTGCTGTTTGA

mRNA sequence

ATTCCGCACCTAACGCGTTTTCTCTTCCTCTTCCACCTTTCTTTTTCCTTTTCTCCTTCATTTTTTGTCTTCTCAATTCACTCTATTCCTCTTCTTTCTAGTTTCATCCCTGCAATTCTTACCATTCGCCTCTGTAGGCTTTCTTTCTTTTCTTGAATTGATCGCCTGAGTTGGGTTTTTGGTGATATAGGGGTTTTGAGGACAATGAGCGATCATCTTGTCCTGTATGTTGACCATTTGATTCCACCAGTTGCTCCAGTTCAGCCTGTGTCCGACCCGGTTGACCCGGTTCCTTCCGCACCGCGTGAGGGTGTTTCTGACTCGGCTGCGGCTATTCCTTCCTGTTCTACTGCCACTGCGGATGATCGGACGGTGGAGCAGGATGCACCCAATGAGGAGGACCCTCTGATTCAGGCGGCGGAGTGTCGCATTTGTCAGGAAGAAGACACTCTCAATAATTTAGAAACTCCCTGCGCATGTAGTGGTAGTCTTAAGTATGCTCATAGGAAGTGCGTTCAACATTGGTGCAATGAGAAAGGAGACATAACTTGTGAGATATGTCATCAGTCTCTTTTGTCTATCCTCTCCGAGCCATACCTTTTGTTCGTCTTTTCCTTTGACACATCCATCTCTGAGAAAAGCATAACAGTGTTTGAATCTGACATCATAGAAGATTGTTCCAAGTCATTGAGGAGAAGATGGGCAGCATGTGAATTGGTGGATTCTTCCCTTCCTCATGCTCAACCAAAATCTTATCGACCTGGATATACTGCACCCCCTCGTTCTGAAGAAACTGTGATTGATATGGAGGGACGATGGACTATTGCTGGTAACCCGTTAGACCTTAGAGATACTCGGGTACTGGCCATTGCGGAGGCAGAACGTAATTTCTTGGAAGCCGAATATGATGATTATACTGCTTCAAATGATAGTGGAGCTGCATTTTGCCGATCAGCTGCCCTTATTCTATTAGCCCTTCTCCTTCTGCGACACGCATTGACCATAACTGATCCAGACGGTGATGATGACGCATCTGCCTTTTTCTCTATTTTCTTGCTTCGTGCTGCTGGTTTTCTTCTACCATGTTACATCATGGCTTGGGCCATCAGTATCCTGCAACGTCGTCGACAAAGACAGGAGGCGGCAGCACTGGCTGCAACACAAGTGGCGTTTGTGCTACAACATGGACAGCATAGAGGTTTACAATTTGCAATTGCATCAGCAGGACCGCCCCTCACCCCTCACCCTCACCCTCACCCTCACCCACACCCACACCCTCATCCTCACCCTCACCCCCACCCACACCCACACCCTCCCCCTCACCCACACCCTCACCCTGCTGTTTGA

Coding sequence (CDS)

ATGAGCGATCATCTTGTCCTGTATGTTGACCATTTGATTCCACCAGTTGCTCCAGTTCAGCCTGTGTCCGACCCGGTTGACCCGGTTCCTTCCGCACCGCGTGAGGGTGTTTCTGACTCGGCTGCGGCTATTCCTTCCTGTTCTACTGCCACTGCGGATGATCGGACGGTGGAGCAGGATGCACCCAATGAGGAGGACCCTCTGATTCAGGCGGCGGAGTGTCGCATTTGTCAGGAAGAAGACACTCTCAATAATTTAGAAACTCCCTGCGCATGTAGTGGTAGTCTTAAGTATGCTCATAGGAAGTGCGTTCAACATTGGTGCAATGAGAAAGGAGACATAACTTGTGAGATATGTCATCAGTCTCTTTTGTCTATCCTCTCCGAGCCATACCTTTTGTTCGTCTTTTCCTTTGACACATCCATCTCTGAGAAAAGCATAACAGTGTTTGAATCTGACATCATAGAAGATTGTTCCAAGTCATTGAGGAGAAGATGGGCAGCATGTGAATTGGTGGATTCTTCCCTTCCTCATGCTCAACCAAAATCTTATCGACCTGGATATACTGCACCCCCTCGTTCTGAAGAAACTGTGATTGATATGGAGGGACGATGGACTATTGCTGGTAACCCGTTAGACCTTAGAGATACTCGGGTACTGGCCATTGCGGAGGCAGAACGTAATTTCTTGGAAGCCGAATATGATGATTATACTGCTTCAAATGATAGTGGAGCTGCATTTTGCCGATCAGCTGCCCTTATTCTATTAGCCCTTCTCCTTCTGCGACACGCATTGACCATAACTGATCCAGACGGTGATGATGACGCATCTGCCTTTTTCTCTATTTTCTTGCTTCGTGCTGCTGGTTTTCTTCTACCATGTTACATCATGGCTTGGGCCATCAGTATCCTGCAACGTCGTCGACAAAGACAGGAGGCGGCAGCACTGGCTGCAACACAAGTGGCGTTTGTGCTACAACATGGACAGCATAGAGGTTTACAATTTGCAATTGCATCAGCAGGACCGCCCCTCACCCCTCACCCTCACCCTCACCCTCACCCACACCCACACCCTCATCCTCACCCTCACCCCCACCCACACCCACACCCTCCCCCTCACCCACACCCTCACCCTGCTGTTTGA

Protein sequence

MSDHLVLYVDHLIPPVAPVQPVSDPVDPVPSAPREGVSDSAAAIPSCSTATADDRTVEQDAPNEEDPLIQAAECRICQEEDTLNNLETPCACSGSLKYAHRKCVQHWCNEKGDITCEICHQSLLSILSEPYLLFVFSFDTSISEKSITVFESDIIEDCSKSLRRRWAACELVDSSLPHAQPKSYRPGYTAPPRSEETVIDMEGRWTIAGNPLDLRDTRVLAIAEAERNFLEAEYDDYTASNDSGAAFCRSAALILLALLLLRHALTITDPDGDDDASAFFSIFLLRAAGFLLPCYIMAWAISILQRRRQRQEAAALAATQVAFVLQHGQHRGLQFAIASAGPPLTPHPHPHPHPHPHPHPHPHPHPHPHPPPHPHPHPAV

Homology

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BLAST of Carg25814 vs. NCBI nr
Match: XP_022946694.1 (uncharacterized protein LOC111450687 [Cucurbita moschata])

HSP 1 Score: 481.1 bits (1237), Expect = 3.5e-132
Identity = 275/346 (79.48%), Postives = 277/346 (80.06%), Query Frame = 0


Query: 1   MSDHLVLYVDHLIPPXXXXXXXXXXXXXXXXXXXEGVSDSAAAIPSCSTATADDRTVEQD 60
           MSDHLVLYVDHLIPPXXXXXXXXXXXXXXXXXXXEGVSDSAAAIPSCSTATADDRTVEQD
Sbjct: 1   MSDHLVLYVDHLIPPXXXXXXXXXXXXXXXXXXXEGVSDSAAAIPSCSTATADDRTVEQD 60

Query: 61  APNEEDPLIQAAECRICQEEDTLNNLETPCACSGSLKYAHRKCVQHWCNEKGDITCEICH 120
           APNEEDPLIQAAECRICQEEDTLNNLETPCACSGSLKYAHRKCVQHWCNEKGDITCEICH
Sbjct: 61  APNEEDPLIQAAECRICQEEDTLNNLETPCACSGSLKYAHRKCVQHWCNEKGDITCEICH 120

Query: 121 QSLLSILSEPYLLFVFSFDTSISEKSITVFESDIIEDCSKSLRRRWAACELVDSSLPHAQ 180
           Q                                                           
Sbjct: 121 Q----------------------------------------------------------- 180

Query: 181 PKSYRPGYTAPPRSEETVIDMEGRWTIAGNPLDLRDTRVLAIAEAERNFLEAEYDDYTAS 240
             SY+PGYTAPPRSEETVIDMEGRWTIAGNPLDLRDTR+LAIAEAERNFLEAEYDDY AS
Sbjct: 181 --SYQPGYTAPPRSEETVIDMEGRWTIAGNPLDLRDTRLLAIAEAERNFLEAEYDDYAAS 240

Query: 241 NDSGAAFCRSAALILLALXXLRHALTITDPDGDDDASAFFSIFLLRAAGFLLPCYIMAWA 300
           NDSGAAFCRSAAL     XX  HALTITDPDGDDDASAFFSIFLLRAAGFLLPCYIMAWA
Sbjct: 241 NDSGAAFCRSAALXXXXXXXXXHALTITDPDGDDDASAFFSIFLLRAAGFLLPCYIMAWA 285

Query: 301 ISILQRRRQRQEAAALAATQVAFVLQHGQHRGLQFAIASAGPPLTP 347
           ISILQRRRQRQEAAALAATQVAFVLQHGQHRGLQFAIASAGPPLTP
Sbjct: 301 ISILQRRRQRQEAAALAATQVAFVLQHGQHRGLQFAIASAGPPLTP 285

[Close]

BLAST of Carg25814 vs. NCBI nr
Match: XP_023547303.1 (uncharacterized protein LOC111806165 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 475.3 bits (1222), Expect = 1.9e-130
Identity = 273/346 (78.90%), Postives = 275/346 (79.48%), Query Frame = 0


Query: 1   MSDHLVLYVDHLIPPXXXXXXXXXXXXXXXXXXXEGVSDSAAAIPSCSTATADDRTVEQD 60
           MSDHLVLYVDHLIPPXXXXXXXXXXXXXXXXXXXEGVSDSAAAIPS STATADDRTVEQD
Sbjct: 1   MSDHLVLYVDHLIPPXXXXXXXXXXXXXXXXXXXEGVSDSAAAIPSSSTATADDRTVEQD 60

Query: 61  APNEEDPLIQAAECRICQEEDTLNNLETPCACSGSLKYAHRKCVQHWCNEKGDITCEICH 120
           APNEEDPLIQAAECRICQEEDTLNNLETPCACSGSLKYAHRKCVQHWCNEKGDITCEICH
Sbjct: 61  APNEEDPLIQAAECRICQEEDTLNNLETPCACSGSLKYAHRKCVQHWCNEKGDITCEICH 120

Query: 121 QSLLSILSEPYLLFVFSFDTSISEKSITVFESDIIEDCSKSLRRRWAACELVDSSLPHAQ 180
           Q                                                           
Sbjct: 121 Q----------------------------------------------------------- 180

Query: 181 PKSYRPGYTAPPRSEETVIDMEGRWTIAGNPLDLRDTRVLAIAEAERNFLEAEYDDYTAS 240
             SY+PGYTAPPRSEETVIDMEGRWTIAGNPLDLRDTR+LAIAEAERNFLEAEYDDY AS
Sbjct: 181 --SYQPGYTAPPRSEETVIDMEGRWTIAGNPLDLRDTRLLAIAEAERNFLEAEYDDYAAS 240

Query: 241 NDSGAAFCRSAALILLALXXLRHALTITDPDGDDDASAFFSIFLLRAAGFLLPCYIMAWA 300
           NDSGAAFCRSAAL     XX  HALTITDPDGDDDASAFFSIFLLRAAGFLLPCYIMAWA
Sbjct: 241 NDSGAAFCRSAALXXXXXXXXXHALTITDPDGDDDASAFFSIFLLRAAGFLLPCYIMAWA 285

Query: 301 ISILQRRRQRQEAAALAATQVAFVLQHGQHRGLQFAIASAGPPLTP 347
           ISILQRRRQRQEAAALAATQVAFVLQHGQHRGLQFAIASAGPPL P
Sbjct: 301 ISILQRRRQRQEAAALAATQVAFVLQHGQHRGLQFAIASAGPPLAP 285

[Close]

BLAST of Carg25814 vs. NCBI nr
Match: XP_022144437.1 (uncharacterized protein LOC111014120 [Momordica charantia])

HSP 1 Score: 461.5 bits (1186), Expect = 2.9e-126
Identity = 262/348 (75.29%), Postives = 272/348 (78.16%), Query Frame = 0


Query: 1   MSDHLVLYVDHLIPPXXXXXXXXXXXXXXXXXXXEGVSDSAAAIPSCSTAT--ADDRTVE 60
           MSDHLVLYVDHLI P XXXXXXXXXXXXXXXX  E V DSAAA PSCSTAT  ADDRTV+
Sbjct: 1   MSDHLVLYVDHLIRPVXXXXXXXXXXXXXXXXPREAVVDSAAAGPSCSTATAVADDRTVK 60

Query: 61  QDAPNEEDPLIQAAECRICQEEDTLNNLETPCACSGSLKYAHRKCVQHWCNEKGDITCEI 120
           Q APNEE+PLIQAAECRICQEED+LNNLETPCACSGSLKYAHRKCVQHWCNEKGDITCEI
Sbjct: 61  QHAPNEEEPLIQAAECRICQEEDSLNNLETPCACSGSLKYAHRKCVQHWCNEKGDITCEI 120

Query: 121 CHQSLLSILSEPYLLFVFSFDTSISEKSITVFESDIIEDCSKSLRRRWAACELVDSSLPH 180
           CHQ                                                         
Sbjct: 121 CHQ--------------------------------------------------------- 180

Query: 181 AQPKSYRPGYTAPPRSEETVIDMEGRWTIAGNPLDLRDTRVLAIAEAERNFLEAEYDDYT 240
               SY+PGYTAPPR+EET IDMEGRWTI+GNPLDLRDTR+LAIAEAER+FLEAEYDDY 
Sbjct: 181 ----SYQPGYTAPPRTEETAIDMEGRWTISGNPLDLRDTRLLAIAEAERHFLEAEYDDYA 240

Query: 241 ASNDSGAAFCRSAALILLALXXLRHALTITDPDGDDDASAFFSIFLLRAAGFLLPCYIMA 300
            SNDSGAAFCRSAALILLAL  LRHALTITDPDG+DDASAFFSIFLLRAAGFLLPCYIMA
Sbjct: 241 TSNDSGAAFCRSAALILLALLLLRHALTITDPDGEDDASAFFSIFLLRAAGFLLPCYIMA 287

Query: 301 WAISILQRRRQRQEAAALAATQVAFVLQHGQHRGLQFAIASAGPPLTP 347
           WAISILQRRRQRQEAAALAATQVAFVLQHGQHRGLQFAIAS+GPPLTP
Sbjct: 301 WAISILQRRRQRQEAAALAATQVAFVLQHGQHRGLQFAIASSGPPLTP 287

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BLAST of Carg25814 vs. NCBI nr
Match: XP_004138916.1 (PREDICTED: uncharacterized protein LOC101203306 [Cucumis sativus] >XP_011649046.1 PREDICTED: uncharacterized protein LOC101203306 [Cucumis sativus] >XP_011649047.1 PREDICTED: uncharacterized protein LOC101203306 [Cucumis sativus] >KGN61376.1 hypothetical protein Csa_2G100580 [Cucumis sativus])

HSP 1 Score: 417.9 bits (1073), Expect = 3.6e-113
Identity = 229/347 (65.99%), Postives = 238/347 (68.59%), Query Frame = 0


Query: 1   MSDHLVLYVDHLIPPXXXXXXXXXXXXXXXXXXXEGVSDS----AAAIPSCSTATADDRT 60
           MSDHLVLYVD+LIPP                   E + DS                 DRT
Sbjct: 1   MSDHLVLYVDNLIPP---APPLQPASDLLHPQPSEALPDSXXXXXXXXXXXXXXXXXDRT 60

Query: 61  VEQDAPNEEDPLIQAAECRICQEEDTLNNLETPCACSGSLKYAHRKCVQHWCNEKGDITC 120
           VE DAPNE+DPLIQ AECRICQEED+LNNLETPCACSGSLKYAHRKCVQHWCNEKGDITC
Sbjct: 61  VETDAPNEDDPLIQVAECRICQEEDSLNNLETPCACSGSLKYAHRKCVQHWCNEKGDITC 120

Query: 121 EICHQSLLSILSEPYLLFVFSFDTSISEKSITVFESDIIEDCSKSLRRRWAACELVDSSL 180
           EICHQ                                                       
Sbjct: 121 EICHQ------------------------------------------------------- 180

Query: 181 PHAQPKSYRPGYTAPPRSEETVIDMEGRWTIAGNPLDLRDTRVLAIAEAERNFLEAEYDD 240
                  Y+PGYTAPPRSEET IDMEGRWTIAGNPLDLRDTR+LAIAEAER+FLEA+YDD
Sbjct: 181 ------PYQPGYTAPPRSEETAIDMEGRWTIAGNPLDLRDTRLLAIAEAERHFLEADYDD 240

Query: 241 YTASNDSGAAFCRSAALILLALXXLRHALTITDPDGDDDASAFFSIFLLRAAGFLLPCYI 300
           Y ASNDSGAAFCRSAALIL   XX RHALTITDPDGDDDASAFFSIF+LRAAGFLLPCYI
Sbjct: 241 YAASNDSGAAFCRSAALILXXXXXXRHALTITDPDGDDDASAFFSIFMLRAAGFLLPCYI 283

Query: 301 MAWAISILQRRRQRQEAAALAATQVAFVLQHGQHRGLQFAIASAGPP 344
           MAWAISILQRRRQRQEAAALAATQVAFVLQHGQHRGLQFAIAS GPP
Sbjct: 301 MAWAISILQRRRQRQEAAALAATQVAFVLQHGQHRGLQFAIASTGPP 283

[Close]

BLAST of Carg25814 vs. NCBI nr
Match: XP_022997773.1 (uncharacterized protein LOC111492629 isoform X2 [Cucurbita maxima])

HSP 1 Score: 414.5 bits (1064), Expect = 4.0e-112
Identity = 223/336 (66.37%), Postives = 229/336 (68.15%), Query Frame = 0


Query: 1   MSDHLVLYVDHLIPPXXXXXXXXXXXXXXXXXXXEGVSDSAAAIPSCSTATADDRTVEQD 60
           M DHLVLYVDHLI P                   EGV DSAAA PSCSTATAD  TVEQD
Sbjct: 1   MGDHLVLYVDHLIRPVAPVQSVAEPVDPVPSAPREGVVDSAAAGPSCSTATADHPTVEQD 60

Query: 61  APNEEDPLIQAAECRICQEEDTLNNLETPCACSGSLKYAHRKCVQHWCNEKGDITCEICH 120
           APNEE+PLIQ AECRICQEED +NNLETPCACSGSLKYAHRKCVQHWCNEKGDI CEICH
Sbjct: 61  APNEEEPLIQVAECRICQEEDGINNLETPCACSGSLKYAHRKCVQHWCNEKGDIICEICH 120

Query: 121 QSLLSILSEPYLLFVFSFDTSISEKSITVFESDIIEDCSKSLRRRWAACELVDSSLPHAQ 180
           Q                                                           
Sbjct: 121 Q----------------------------------------------------------- 180

Query: 181 PKSYRPGYTAPPRSEETVIDMEGRWTIAGNPLDLRDTRVLAIAEAERNFLEAEYDDYTAS 240
              Y+PGYTAP RSEET IDMEGRWTIAGNPLDLRDTR+LAIAEAER+FLEAEYDDY AS
Sbjct: 181 --FYQPGYTAPSRSEETAIDMEGRWTIAGNPLDLRDTRLLAIAEAERHFLEAEYDDYAAS 240

Query: 241 NDSGAAFCRSAALILLALXXLRHALTITDPDGDDDASAFFSIFLLRAAGFLLPCYIMAWA 300
           NDSGAAFCRSAALILLAL  LRHALTITDPDG+DDASAFFSIFLLRAAGFLLPCYIMAWA
Sbjct: 241 NDSGAAFCRSAALILLALLLLRHALTITDPDGEDDASAFFSIFLLRAAGFLLPCYIMAWA 275

Query: 301 ISILQRRRQRQEAAALAATQVAFVLQHGQHRGLQFA 337
           ISILQR            TQVAFVLQHGQHRGLQFA
Sbjct: 301 ISILQRXXXXXXXXXXXXTQVAFVLQHGQHRGLQFA 275

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BLAST of Carg25814 vs. TAIR10
Match: AT1G14260.1 (RING/FYVE/PHD zinc finger superfamily protein)

HSP 1 Score: 212.6 bits (540), Expect = 4.2e-55
Identity = 138/284 (48.59%), Postives = 155/284 (54.58%), Query Frame = 0


Query: 53  DDRTVEQDAPNEEDPLIQAAECRICQEEDTLNNLETPCACSGSLKYAHRKCVQHWCNEKG 112
           D  T E +   EED LI +AECRICQ+E  + NLE+PCAC+GSLKYAHRKCVQ WCNEKG
Sbjct: 39  DGDTTENE---EEDSLISSAECRICQDECDIKNLESPCACNGSLKYAHRKCVQRWCNEKG 98

Query: 113 DITCEICHQSLLSILSEPYLLFVFSFDTSISEKSITVFESDIIEDCSKSLRRRWAACELV 172
           +  CEICHQ                                                   
Sbjct: 99  NTICEICHQ--------------------------------------------------- 158

Query: 173 DSSLPHAQPKSYRPGYTA---PPRSEETVIDMEGRWTIAGNPLDLRDTRVLAIAEAERNF 232
                      Y+ GYT+            D+ G W I+G  LDL D R+LAIAEAER  
Sbjct: 159 ----------PYQAGYTSXXXXXXXXXXXXDIGGGWRISG--LDLDDPRLLAIAEAERQI 218

Query: 233 LEAEYDDYTASNDSGAAFCRSAALILLALXXLRHALTITD--PDGDDDASAFFSIFLLRA 292
           LE+EYDDYTAS+ SGAAF RSA       XX RHALTI D     DDD S+  S+FLLRA
Sbjct: 219 LESEYDDYTASDTSGAAFFRSAXXXXXXXXXXRHALTIPDYSDSEDDDPSSILSLFLLRA 255

Query: 293 AGFLLPCYIMAWAISILQRRRQRQEAAALAATQVAFVLQHGQHR 332
           A FLLPCYIMA AISIL RRRQRQEAA L AT+ A VL   Q R
Sbjct: 279 ASFLLPCYIMASAISILHRRRQRQEAADL-ATRFALVLSSRQPR 255

[Close]

BLAST of Carg25814 vs. TAIR10
Match: AT3G47550.3 (RING/FYVE/PHD zinc finger superfamily protein)

HSP 1 Score: 159.8 bits (403), Expect = 3.2e-39
Identity = 119/347 (34.29%), Postives = 143/347 (41.21%), Query Frame = 0


Query: 1   MSDHLVLYVDHLIPPXXXXXXXXXXXXXXXXXXXEGVSDSAAAIPSCSTATADDRTVEQD 60
           M+DHL L  D LI                     +G       + S S    +       
Sbjct: 1   MADHLSLCTDRLITSESLDSEKDSDSSGESSYRPQGTD-----LASSSVNETEVPREYYA 60

Query: 61  APNEEDPLIQAAECRICQEEDTLNNLETPCACSGSLKYAHRKCVQHWCNEKGDITCEICH 120
             +EE+PL+Q+ ECRICQEED+  NLE PCAC+GSLKYAHRKCVQ WCNEKGDITCEICH
Sbjct: 61  VADEEEPLLQSVECRICQEEDSTKNLEAPCACNGSLKYAHRKCVQRWCNEKGDITCEICH 120

Query: 121 QSLLSILSEPYLLFVFSFDTSISEKSITVFESDIIEDCSKSLRRRWAACELVDSSLPHAQ 180
           Q                                                           
Sbjct: 121 Q----------------------------------------------------------- 180

Query: 181 PKSYRPGYTA--PPRSEETVIDMEGRWTIAGNPLDLRDTRVLAIAEAERNFLEAEYDDYT 240
              Y+ GYTA         +I +   W   G PLDL D R+LA+A AER+FLEA+YD+Y+
Sbjct: 181 --PYQHGYTAXXXXXXXXXIIHIGDDWE-NGVPLDLTDPRILAMAAAERHFLEADYDEYS 240

Query: 241 AS-NDSGAAFCRSAALILLALXXLRHALTITDPDGDDDASAFFSIFLLRAAGFLLPCYIM 300
            +                   XX                     +FLLRAAGFLLPCYIM
Sbjct: 241 ENXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLFLLRAAGFLLPCYIM 280

Query: 301 AWAISILQRRRQRQEAAALAATQVAFVLQHG--QHRGLQFAIASAGP 343
           AWAI ILQ                  ++  G  Q RGL FA+A   P
Sbjct: 301 AWAIGILQXXXXXXXXXXXXXXXXXXMIHGGGPQRRGLHFAVAPQPP 280

[Close]

BLAST of Carg25814 vs. TAIR10
Match: AT2G02960.5 (RING/FYVE/PHD zinc finger superfamily protein)

HSP 1 Score: 151.8 bits (382), Expect = 8.8e-37
Identity = 84/190 (44.21%), Postives = 102/190 (53.68%), Query Frame = 0


Query: 58  EQDAPNEEDPLIQAAECRICQEEDTLNNLETPCACSGSLKYAHRKCVQHWCNEKGDITCE 117
           + D  +E +PLI + ECRIC +E  + NLE+PCACSGSLKYAHRKCVQ WCNEKG+I CE
Sbjct: 27  DDDHDDENEPLIVSGECRICSDESPVENLESPCACSGSLKYAHRKCVQRWCNEKGNIICE 86

Query: 118 ICHQSLLSILSEPYLLFVFSFDTSISEKSITVFESDIIEDCSKSLRRRWAACELVDSSLP 177
           ICHQ                                                        
Sbjct: 87  ICHQ-------------------------------------------------------- 146

Query: 178 HAQPKSYRPGYTAPP---RSEETVIDMEGRWTIAGNPLDLRDTRVLAIAEAERNFLEAEY 237
                 Y+PGYTAPP   + EET ID+ G WTI+G  LD+ D R+LAIAEAER +LE+EY
Sbjct: 147 -----PYQPGYTAPPPPLQPEETTIDIGGGWTISG--LDVHDPRLLAIAEAERRYLESEY 153

Query: 238 DDYTASNDSG 245
            +YTAS+ SG
Sbjct: 207 VEYTASSASG 153

[Close]

BLAST of Carg25814 vs. TAIR10
Match: AT5G62460.1 (RING/FYVE/PHD zinc finger superfamily protein)

HSP 1 Score: 143.3 bits (360), Expect = 3.1e-34
Identity = 79/180 (43.89%), Postives = 94/180 (52.22%), Query Frame = 0


Query: 67  PLIQAAECRICQEEDTLNNLETPCACSGSLKYAHRKCVQHWCNEKGDITCEICHQSLLSI 126
           PLIQ+ ECRICQEED++ NLE+PC+CSGSLKYAHRKCVQ WCNEKGD TCEICH      
Sbjct: 71  PLIQSVECRICQEEDSVKNLESPCSCSGSLKYAHRKCVQRWCNEKGDTTCEICH------ 130

Query: 127 LSEPYLLFVFSFDTSISEKSITVFESDIIEDCSKSLRRRWAACELVDSSLPHAQPKSYRP 186
                                                                  KSY+P
Sbjct: 131 -------------------------------------------------------KSYQP 188

Query: 187 GYTAP--PRSEETVIDMEGRWTIAGNPLDLRDTRVLAIAEAERNFLEAEYDDYTASNDSG 245
           GYTAP      +T+ID+   W   G  LDL D R+LA+A AER+F +A+YD+Y  SN SG
Sbjct: 191 GYTAPXXXXXXDTIIDIGEDWG-NGVHLDLNDPRILAMAAAERHFFDADYDEYADSNSSG 188

[Close]

BLAST of Carg25814 vs. TAIR10
Match: AT2G01275.1 (RING/FYVE/PHD zinc finger superfamily protein)

HSP 1 Score: 102.1 bits (253), Expect = 8.0e-22
Identity = 55/121 (45.45%), Postives = 65/121 (53.72%), Query Frame = 0


Query: 1   MSDHLVLYVDHLIPPXXXXXXXXXXXXXXXXXXXEGVSDSAAAIPSCSTATADDRTVEQD 60
           M DH VL VD LI                            A IP       DD+T+E  
Sbjct: 1   MGDHFVLLVDRLITESTIEAAIQSRNQML-----------QANIPVEECTILDDKTLEML 60

Query: 61  APNEEDPLIQAAECRICQEEDTLNNLETPCACSGSLKYAHRKCVQHWCNEKGDITCEICH 120
              +    +  AECRIC +ED  +N+ETPC+CSGS+KYAHR+CVQ WCNEKGD TCEICH
Sbjct: 61  RNGD----LSMAECRICHDEDLDSNMETPCSCSGSVKYAHRRCVQRWCNEKGDTTCEICH 106

Query: 121 Q 122
           Q
Sbjct: 121 Q 106

[Close]

BLAST of Carg25814 vs. Swiss-Prot
Match: sp|A0JN69|MARH3_BOVIN (E3 ubiquitin-protein ligase MARCH3 OS=Bos taurus OX=9913 GN=MARCH3 PE=2 SV=1)

HSP 1 Score: 58.2 bits (139), Expect = 2.4e-07
Identity = 24/66 (36.36%), Postives = 37/66 (56.06%), Query Frame = 0


Query: 55  RTVEQDAPNEEDPLIQAAECRICQEEDTLNNLETPCACSGSLKYAHRKCVQHWCNEKGDI 114
           RT+   +P  + P+     CRIC E  +  +L +PC C+G+L   HR C++HW +     
Sbjct: 57  RTLATQSPFNDRPM-----CRICHEGSSQEDLLSPCECTGTLGTIHRSCLEHWLSSSNTS 116

Query: 115 TCEICH 121
            CE+CH
Sbjct: 117 YCELCH 117

[Close]

BLAST of Carg25814 vs. Swiss-Prot
Match: sp|Q86UD3|MARH3_HUMAN (E3 ubiquitin-protein ligase MARCH3 OS=Homo sapiens OX=9606 GN=MARCH3 PE=1 SV=1)

HSP 1 Score: 58.2 bits (139), Expect = 2.4e-07
Identity = 24/66 (36.36%), Postives = 37/66 (56.06%), Query Frame = 0


Query: 55  RTVEQDAPNEEDPLIQAAECRICQEEDTLNNLETPCACSGSLKYAHRKCVQHWCNEKGDI 114
           RT+   +P  + P+     CRIC E  +  +L +PC C+G+L   HR C++HW +     
Sbjct: 57  RTLATQSPFNDRPM-----CRICHEGSSQEDLLSPCECTGTLGTIHRSCLEHWLSSSNTS 116

Query: 115 TCEICH 121
            CE+CH
Sbjct: 117 YCELCH 117

[Close]

BLAST of Carg25814 vs. Swiss-Prot
Match: sp|Q8BRX9|MARH3_MOUSE (E3 ubiquitin-protein ligase MARCH3 OS=Mus musculus OX=10090 GN=March3 PE=2 SV=1)

HSP 1 Score: 58.2 bits (139), Expect = 2.4e-07
Identity = 24/66 (36.36%), Postives = 37/66 (56.06%), Query Frame = 0


Query: 55  RTVEQDAPNEEDPLIQAAECRICQEEDTLNNLETPCACSGSLKYAHRKCVQHWCNEKGDI 114
           RT+   +P  + P+     CRIC E  +  +L +PC C+G+L   HR C++HW +     
Sbjct: 57  RTLATQSPFNDRPM-----CRICHEGSSQEDLLSPCECTGTLGTIHRSCLEHWLSSSNTS 116

Query: 115 TCEICH 121
            CE+CH
Sbjct: 117 YCELCH 117

[Close]

BLAST of Carg25814 vs. Swiss-Prot
Match: sp|Q5XIE5|MARH3_RAT (E3 ubiquitin-protein ligase MARCH3 OS=Rattus norvegicus OX=10116 GN=March3 PE=1 SV=1)

HSP 1 Score: 58.2 bits (139), Expect = 2.4e-07
Identity = 24/66 (36.36%), Postives = 37/66 (56.06%), Query Frame = 0


Query: 55  RTVEQDAPNEEDPLIQAAECRICQEEDTLNNLETPCACSGSLKYAHRKCVQHWCNEKGDI 114
           RT+   +P  + P+     CRIC E  +  +L +PC C+G+L   HR C++HW +     
Sbjct: 57  RTLATQSPFNDRPM-----CRICHEGSSQEDLLSPCECTGTLGTIHRSCLEHWLSSSNTS 116

Query: 115 TCEICH 121
            CE+CH
Sbjct: 117 YCELCH 117

[Close]

BLAST of Carg25814 vs. Swiss-Prot
Match: sp|Q0IH10|MARH3_XENLA (E3 ubiquitin-protein ligase MARCH3 OS=Xenopus laevis OX=8355 GN=march3 PE=2 SV=1)

HSP 1 Score: 58.2 bits (139), Expect = 2.4e-07
Identity = 21/47 (44.68%), Postives = 29/47 (61.70%), Query Frame = 0


Query: 74  CRICQEEDTLNNLETPCACSGSLKYAHRKCVQHWCNEKGDITCEICH 121
           CRIC E  T  +L +PC C+G+L   HR C++HW +      CE+CH
Sbjct: 70  CRICHEGSTQEDLLSPCECTGTLGTIHRSCLEHWLSSSNTSYCELCH 116

[Close]

BLAST of Carg25814 vs. TrEMBL
Match: tr|A0A0A0LN28|A0A0A0LN28_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G100580 PE=4 SV=1)

HSP 1 Score: 417.9 bits (1073), Expect = 2.4e-113
Identity = 229/347 (65.99%), Postives = 238/347 (68.59%), Query Frame = 0


Query: 1   MSDHLVLYVDHLIPPXXXXXXXXXXXXXXXXXXXEGVSDS----AAAIPSCSTATADDRT 60
           MSDHLVLYVD+LIPP                   E + DS                 DRT
Sbjct: 1   MSDHLVLYVDNLIPP---APPLQPASDLLHPQPSEALPDSXXXXXXXXXXXXXXXXXDRT 60

Query: 61  VEQDAPNEEDPLIQAAECRICQEEDTLNNLETPCACSGSLKYAHRKCVQHWCNEKGDITC 120
           VE DAPNE+DPLIQ AECRICQEED+LNNLETPCACSGSLKYAHRKCVQHWCNEKGDITC
Sbjct: 61  VETDAPNEDDPLIQVAECRICQEEDSLNNLETPCACSGSLKYAHRKCVQHWCNEKGDITC 120

Query: 121 EICHQSLLSILSEPYLLFVFSFDTSISEKSITVFESDIIEDCSKSLRRRWAACELVDSSL 180
           EICHQ                                                       
Sbjct: 121 EICHQ------------------------------------------------------- 180

Query: 181 PHAQPKSYRPGYTAPPRSEETVIDMEGRWTIAGNPLDLRDTRVLAIAEAERNFLEAEYDD 240
                  Y+PGYTAPPRSEET IDMEGRWTIAGNPLDLRDTR+LAIAEAER+FLEA+YDD
Sbjct: 181 ------PYQPGYTAPPRSEETAIDMEGRWTIAGNPLDLRDTRLLAIAEAERHFLEADYDD 240

Query: 241 YTASNDSGAAFCRSAALILLALXXLRHALTITDPDGDDDASAFFSIFLLRAAGFLLPCYI 300
           Y ASNDSGAAFCRSAALIL   XX RHALTITDPDGDDDASAFFSIF+LRAAGFLLPCYI
Sbjct: 241 YAASNDSGAAFCRSAALILXXXXXXRHALTITDPDGDDDASAFFSIFMLRAAGFLLPCYI 283

Query: 301 MAWAISILQRRRQRQEAAALAATQVAFVLQHGQHRGLQFAIASAGPP 344
           MAWAISILQRRRQRQEAAALAATQVAFVLQHGQHRGLQFAIAS GPP
Sbjct: 301 MAWAISILQRRRQRQEAAALAATQVAFVLQHGQHRGLQFAIASTGPP 283

[Close]

BLAST of Carg25814 vs. TrEMBL
Match: tr|A0A1S3B4T5|A0A1S3B4T5_CUCME (uncharacterized protein LOC103485788 OS=Cucumis melo OX=3656 GN=LOC103485788 PE=4 SV=1)

HSP 1 Score: 412.9 bits (1060), Expect = 7.7e-112
Identity = 236/346 (68.21%), Postives = 245/346 (70.81%), Query Frame = 0


Query: 1   MSDHLVLYVDHLIPPXXXXXXXXXXXXXXXXXXXEGVSDSAAAIPSCSTATADDRTVEQD 60
           MSDHLVLYVD+ IPP        XXXXXXXXXXX                    RT+E D
Sbjct: 1   MSDHLVLYVDNFIPP-AAPLQPLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRTLEPD 60

Query: 61  APNEEDPLIQAAECRICQEEDTLNNLETPCACSGSLKYAHRKCVQHWCNEKGDITCEICH 120
           APNE+DPLI  AECRICQEED+L+NLETPCACSGSLKYAHRKCVQHWCNEKGDITCEICH
Sbjct: 61  APNEDDPLILVAECRICQEEDSLSNLETPCACSGSLKYAHRKCVQHWCNEKGDITCEICH 120

Query: 121 QSLLSILSEPYLLFVFSFDTSISEKSITVFESDIIEDCSKSLRRRWAACELVDSSLPHAQ 180
           Q                                                           
Sbjct: 121 Q----------------------------------------------------------- 180

Query: 181 PKSYRPGYTAPPRSEETVIDMEGRWTIAGNPLDLRDTRVLAIAEAERNFLEAEYDDYTAS 240
              Y+PGYTAPPRSEET IDMEGRWTIAGNPLDLRDTR+LAIAEAER+FLEAEYDDY AS
Sbjct: 181 --PYQPGYTAPPRSEETAIDMEGRWTIAGNPLDLRDTRLLAIAEAERHFLEAEYDDYAAS 240

Query: 241 NDSGAAFCRSAALILLALXXLRHALTITDPDGDDDASAFFSIFLLRAAGFLLPCYIMAWA 300
           NDSGAAFCRSAALIL   XX RHALTITDPDGDDDASAFFSIF+LRAAGFLLPCYIMAWA
Sbjct: 241 NDSGAAFCRSAALILXXXXXXRHALTITDPDGDDDASAFFSIFMLRAAGFLLPCYIMAWA 284

Query: 301 ISILQRRRQRQEAAALAATQVAFVLQHGQHRGLQFAIASAGPPLTP 347
           ISILQRRRQRQEAAALAATQVAFVLQHGQHRGLQFAIAS GPPLTP
Sbjct: 301 ISILQRRRQRQEAAALAATQVAFVLQHGQHRGLQFAIASTGPPLTP 284

[Close]

BLAST of Carg25814 vs. TrEMBL
Match: tr|A0A251LSX0|A0A251LSX0_MANES (Uncharacterized protein OS=Manihot esculenta OX=3983 GN=MANES_01G185400 PE=4 SV=1)

HSP 1 Score: 374.0 bits (959), Expect = 4.0e-100
Identity = 209/350 (59.71%), Postives = 229/350 (65.43%), Query Frame = 0


Query: 1   MSDHLVLYVDHLIPPXXXXXXXXXXXXXXXXXXXEGVSDSAAAIPSCSTATADDRTVEQD 60
           MSDH+VLYVDHL+ P                   + V    +A PS ST   +   V  D
Sbjct: 1   MSDHVVLYVDHLMRP-------------------DQVPPEPSAGPSSSTLNQETHAVALD 60

Query: 61  APNEED-PLIQAAECRICQEEDTLNNLETPCACSGSLKYAHRKCVQHWCNEKGDITCEIC 120
              +ED PLIQ AECRICQEED++NNLETPCACSGSLKYAHRKCVQHWCNEKGDITCEIC
Sbjct: 61  QETQEDEPLIQVAECRICQEEDSVNNLETPCACSGSLKYAHRKCVQHWCNEKGDITCEIC 120

Query: 121 HQSLLSILSEPYLLFVFSFDTSISEKSITVFESDIIEDCSKSLRRRWAACELVDSSLPHA 180
           HQ                                                          
Sbjct: 121 HQ---------------------------------------------------------- 180

Query: 181 QPKSYRPGYTA---PPRSEETVIDMEGRWTIAGNPLDLRDTRVLAIAEAERNFLEAEYDD 240
              SY+PGYTA   PPR+E+T ID+ G WTI+G PLDLRD R+LAIAEAER+FLEAEYD+
Sbjct: 181 ---SYQPGYTAPSRPPRTEDTAIDIGGGWTISGTPLDLRDPRLLAIAEAERHFLEAEYDE 240

Query: 241 YTASNDSGAAFCRSAALILLALXXLRHALTITDPDGDDDASAFFSIFLLRAAGFLLPCYI 300
           Y ASN SGAAFCRSAALIL+AL  LRHALT+TD DGDDD S FFS+FLLRAAGFLLPCYI
Sbjct: 241 YAASNASGAAFCRSAALILMALLLLRHALTVTDADGDDDVSTFFSLFLLRAAGFLLPCYI 269

Query: 301 MAWAISILQRRRQRQEAAALAATQVAFVLQHGQHRGLQFAIASAGPPLTP 347
           MAWAISILQRRRQRQEAAALAATQVAFVLQ GQHRGLQF IAS GP + P
Sbjct: 301 MAWAISILQRRRQRQEAAALAATQVAFVLQSGQHRGLQFTIAS-GPHVAP 269

[Close]

BLAST of Carg25814 vs. TrEMBL
Match: tr|B9S8W6|B9S8W6_RICCO (Membrane associated ring finger 1,8, putative OS=Ricinus communis OX=3988 GN=RCOM_0836410 PE=4 SV=1)

HSP 1 Score: 371.7 bits (953), Expect = 2.0e-99
Identity = 209/353 (59.21%), Postives = 229/353 (64.87%), Query Frame = 0


Query: 1   MSDHLVLYVDHLIPPXXXXXXXXXXXXXXXXXXXEGVSDSAAAIPSCSTATADDRTVEQ- 60
           MSDH+VLYVD LI P                   E V+D A A PSCS    +   V Q 
Sbjct: 1   MSDHVVLYVDRLITP--------------SSSSPEEVADRAVAGPSCSRPNEEPNGVVQE 60

Query: 61  ----DAPNEEDPLIQAAECRICQEEDTLNNLETPCACSGSLKYAHRKCVQHWCNEKGDIT 120
               D  NEE+PLI+ AECRICQEED++ NLETPCACSGSLKYAHRKCVQHWCNEKGDIT
Sbjct: 61  KGNDDNDNEEEPLIKVAECRICQEEDSVTNLETPCACSGSLKYAHRKCVQHWCNEKGDIT 120

Query: 121 CEICHQSLLSILSEPYLLFVFSFDTSISEKSITVFESDIIEDCSKSLRRRWAACELVDSS 180
           CEICH                                                       
Sbjct: 121 CEICH------------------------------------------------------- 180

Query: 181 LPHAQPKSYRPGYTA---PPRSEETVIDMEGRWTIAGNPLDLRDTRVLAIAEAERNFLEA 240
                 K Y+PGYTA   PP++E+T ID+ G WTI+G PLDLRD R+LAIAEAER+FLEA
Sbjct: 181 ------KPYQPGYTAPLRPPQAEDTAIDIGGGWTISGTPLDLRDPRLLAIAEAERHFLEA 240

Query: 241 EYDDYTASNDSGAAFCRSAALILLALXXLRHALTITDPDGDDDASAFFSIFLLRAAGFLL 300
           EYD+Y ASN SGAAFCRSAALIL+AL  LRHALT+TD DGDDD S FFS+FLLRAAGFLL
Sbjct: 241 EYDEYAASNASGAAFCRSAALILMALLLLRHALTVTDADGDDDVSTFFSLFLLRAAGFLL 277

Query: 301 PCYIMAWAISILQRRRQRQEAAALAATQVAFVLQHGQHRGLQFAIASAGPPLT 346
           PCYIMAWAISILQRRRQRQEAAALAATQVAFVLQ GQHRGL F IAS GP +T
Sbjct: 301 PCYIMAWAISILQRRRQRQEAAALAATQVAFVLQSGQHRGLHFTIAS-GPQVT 277

[Close]

BLAST of Carg25814 vs. TrEMBL
Match: tr|A0A1R3IIR0|A0A1R3IIR0_9ROSI (Zinc finger, RING-CH-type OS=Corchorus olitorius OX=93759 GN=COLO4_23016 PE=4 SV=1)

HSP 1 Score: 365.2 bits (936), Expect = 1.8e-97
Identity = 205/351 (58.40%), Postives = 223/351 (63.53%), Query Frame = 0


Query: 1   MSDHLVLYVDHLIPPXXXXXXXXXXXXXXXXXXXEGVSDSAAAIPSCSTATADDRTVEQD 60
           MSDHLVLYVD L+ P                   E    +  A PSCS    +   V  D
Sbjct: 1   MSDHLVLYVDRLVRP-----------VPVQPVESEAGPSTGIAGPSCSADDKEKEVVRGD 60

Query: 61  A---PNEEDPLIQAAECRICQEEDTLNNLETPCACSGSLKYAHRKCVQHWCNEKGDITCE 120
                NEE+PLIQA ECRICQEED++ NLE+PCACSGSLKYAHRKCVQHWCNEKGDI CE
Sbjct: 61  EDHDENEEEPLIQAGECRICQEEDSIQNLESPCACSGSLKYAHRKCVQHWCNEKGDIICE 120

Query: 121 ICHQSLLSILSEPYLLFVFSFDTSISEKSITVFESDIIEDCSKSLRRRWAACELVDSSLP 180
           ICHQ                                                        
Sbjct: 121 ICHQ-------------------------------------------------------- 180

Query: 181 HAQPKSYRPGYTAPPR--SEETVIDMEGRWTIAGNPLDLRDTRVLAIAEAERNFLEAEYD 240
                 Y+ GYTAPPR  +EET ID+ G WTI+G PLDLRD R+LAIAEAER FLEAEYD
Sbjct: 181 -----PYQSGYTAPPRPHAEETAIDIGGGWTISGTPLDLRDPRLLAIAEAERQFLEAEYD 240

Query: 241 DYTASNDSGAAFCRSAALILLALXXLRHALTITDPDGDDDASAFFSIFLLRAAGFLLPCY 300
           +Y ASN SGAAFCRSAALIL+AL  LRHALT+ D DGDDD S FFS+FLLRAAGFLLPCY
Sbjct: 241 EYAASNASGAAFCRSAALILMALLLLRHALTVPDSDGDDDVSTFFSLFLLRAAGFLLPCY 278

Query: 301 IMAWAISILQRRRQRQEAAALAATQVAFVLQHGQHRGLQFAIASAGPPLTP 347
           IMAWAISILQRRRQRQEAAALAATQVAFVLQ GQ RG+QF IAS GPP+TP
Sbjct: 301 IMAWAISILQRRRQRQEAAALAATQVAFVLQSGQRRGMQFTIAS-GPPMTP 278

The following BLAST results are available for this feature:

BLAST of Carg25814 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022946694.1	3.5e-132	79.48	uncharacterized protein LOC111450687 [Cucurbita moschata]	[more]
XP_023547303.1	1.9e-130	78.90	uncharacterized protein LOC111806165 [Cucurbita pepo subsp. pepo]	[more]
XP_022144437.1	2.9e-126	75.29	uncharacterized protein LOC111014120 [Momordica charantia]	[more]
XP_004138916.1	3.6e-113	65.99	PREDICTED: uncharacterized protein LOC101203306 [Cucumis sativus] >XP_011649046....	[more]
XP_022997773.1	4.0e-112	66.37	uncharacterized protein LOC111492629 isoform X2 [Cucurbita maxima]	[more]

BLAST of Carg25814 vs. TAIR10


Match Name	E-value	Identity	Description
AT1G14260.1	4.2e-55	48.59	RING/FYVE/PHD zinc finger superfamily protein	[more]
AT3G47550.3	3.2e-39	34.29	RING/FYVE/PHD zinc finger superfamily protein	[more]
AT2G02960.5	8.8e-37	44.21	RING/FYVE/PHD zinc finger superfamily protein	[more]
AT5G62460.1	3.1e-34	43.89	RING/FYVE/PHD zinc finger superfamily protein	[more]
AT2G01275.1	8.0e-22	45.45	RING/FYVE/PHD zinc finger superfamily protein	[more]

BLAST of Carg25814 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|A0JN69\|MARH3_BOVIN	2.4e-07	36.36	E3 ubiquitin-protein ligase MARCH3 OS=Bos taurus OX=9913 GN=MARCH3 PE=2 SV=1	[more]
sp\|Q86UD3\|MARH3_HUMAN	2.4e-07	36.36	E3 ubiquitin-protein ligase MARCH3 OS=Homo sapiens OX=9606 GN=MARCH3 PE=1 SV=1	[more]
sp\|Q8BRX9\|MARH3_MOUSE	2.4e-07	36.36	E3 ubiquitin-protein ligase MARCH3 OS=Mus musculus OX=10090 GN=March3 PE=2 SV=1	[more]
sp\|Q5XIE5\|MARH3_RAT	2.4e-07	36.36	E3 ubiquitin-protein ligase MARCH3 OS=Rattus norvegicus OX=10116 GN=March3 PE=1 ...	[more]
sp\|Q0IH10\|MARH3_XENLA	2.4e-07	44.68	E3 ubiquitin-protein ligase MARCH3 OS=Xenopus laevis OX=8355 GN=march3 PE=2 SV=1	[more]

BLAST of Carg25814 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A0A0LN28\|A0A0A0LN28_CUCSA	2.4e-113	65.99	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G100580 PE=4 SV=1	[more]
tr\|A0A1S3B4T5\|A0A1S3B4T5_CUCME	7.7e-112	68.21	uncharacterized protein LOC103485788 OS=Cucumis melo OX=3656 GN=LOC103485788 PE=...	[more]
tr\|A0A251LSX0\|A0A251LSX0_MANES	4.0e-100	59.71	Uncharacterized protein OS=Manihot esculenta OX=3983 GN=MANES_01G185400 PE=4 SV=...	[more]
tr\|B9S8W6\|B9S8W6_RICCO	2.0e-99	59.21	Membrane associated ring finger 1,8, putative OS=Ricinus communis OX=3988 GN=RCO...	[more]
tr\|A0A1R3IIR0\|A0A1R3IIR0_9ROSI	1.8e-97	58.40	Zinc finger, RING-CH-type OS=Corchorus olitorius OX=93759 GN=COLO4_23016 PE=4 SV...	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Molecular Function**
Term	Definition
GO:0008270	zinc ion binding

Vocabulary: **INTERPRO**
Term	Definition
IPR033275	MARCH-like
IPR022143	DUF3675
IPR013083	Znf_RING/FYVE/PHD
IPR011016	Znf_RING-CH

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0008270	zinc ion binding

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg25814-RA	Carg25814-RA	mRNA

InterPro

Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 220..240
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 350..372
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 339..380
None	No IPR available	PANTHER	PTHR23012:SF119	RING/FYVE/PHD ZINC FINGER-CONTAINING PROTEIN	coord: 1..122
None	No IPR available	PANTHER	PTHR23012:SF119	RING/FYVE/PHD ZINC FINGER-CONTAINING PROTEIN	coord: 182..333
None	No IPR available	CDD	cd16495	RING_CH-C4HC3_MARCH	coord: 74..120 e-value: 1.0788E-18 score: 78.138
None	No IPR available	SUPERFAMILY	SSF57850	RING/U-box	coord: 72..123
IPR011016	Zinc finger, RING-CH-type	SMART	SM00744	ringv_2	coord: 73..120 e-value: 3.7E-20 score: 83.0
IPR011016	Zinc finger, RING-CH-type	PFAM	PF12906	RINGv	coord: 74..119 e-value: 7.2E-13 score: 48.4
IPR011016	Zinc finger, RING-CH-type	PROSITE	PS51292	ZF_RING_CH	coord: 66..126 score: 21.187
IPR013083	Zinc finger, RING/FYVE/PHD-type	GENE3D	G3DSA:3.30.40.10		coord: 58..128 e-value: 6.2E-18 score: 66.1
IPR022143	Protein of unknown function DUF3675	PFAM	PF12428	DUF3675	coord: 186..301 e-value: 6.2E-41 score: 139.6
IPR033275	E3 ubiquitin-protein ligase MARCH-like	PANTHER	PTHR23012	MEMBRANE ASSOCIATED RING FINGER	coord: 182..333
IPR033275	E3 ubiquitin-protein ligase MARCH-like	PANTHER	PTHR23012	MEMBRANE ASSOCIATED RING FINGER	coord: 1..122

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Carg25814	CmaCh05G008610	Cucurbita maxima (Rimu)	carcmaB1477
Carg25814	CmoCh01G005100	Cucurbita moschata (Rifu)	carcmoB1433
Carg25814	CmoCh05G008670	Cucurbita moschata (Rifu)	carcmoB1434
Carg25814	Cp4.1LG11g07190	Cucurbita pepo (Zucchini)	carcpeB1486

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
Carg25814	Carg20422	Silver-seed gourd	carcarB581

The following block(s) are covering this gene:


Gene	Organism	Block
Carg25814	Wax gourd	carwgoB1255
Carg25814	Cucumber (Gy14) v1	carcgyB1186
Carg25814	Cucurbita pepo (Zucchini)	carcpeB1485
Carg25814	Cucurbita pepo (Zucchini)	carcpeB1487
Carg25814	Melon (DHL92) v3.5.1	carmeB1037
Carg25814	Melon (DHL92) v3.6.1	carmedB1051
Carg25814	Watermelon (97103) v2	carwmbB1126