Carg25781 (gene) Silver-seed gourd

Overview
NameCarg25781
Typegene
OrganismCucurbita argyrosperma (Silver-seed gourd)
DescriptionWD repeat-containing protein 55
LocationCucurbita_argyrosperma_scaffold_318 : 97622 .. 103455 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGAAGTAAACCTTGGAGGCATTCCTTTTGACTTGGACTTCCATCCGTCTGAGCAGTTGGTTGCAGCTGGTCTGATTGACGGCAATCTTCTCTTGTACTTTCTCTTCCAGGTTTCTATTTTATTTTATTTTGTTTTCCTTGATCATTTATTGAATAGTATATTCGTCTTTGCAGGTACCGTTATAGTCCAAATGCTTTACCCCAAAGGTATAGAAATCTCATCATCTCCGCCATCAATATTCACTTCACGTGATTTTATCAAAGTCTTCTAACCTACAATATAAGTCGAGTTTTAAATCATAAGATGACAAAGTGACTGTGCCAATGAACCAAGCTGGTCTATTCATGCTCACTTAATTTTTCTTTTTCTGTCTATCTTAGGCTCTTGAAAGTTCGTGCACATAGTGAATCTTGCAGAGCTGTTCGATTCATCAATGACGGACGTGGTATTGCATTTTTTGATTGCTGTTACTTCCCTATTATTTTGTACTTTCCCTGGCAGGATATTATTGATGTTGACCTGAAAATGATTGGTTTATGGTCTGTTATCAGCAATTTTGACTGGTTCTCCAGACCATTCCATTCTTGCTACAGATGTGGAGACTGGTTCTGTTATTGCTCGTCTTGAAGATGCTCATGAGTAGGTTCCTTTTCTATTGGTTTTAAGTTTTCCATCATCATGCATATTCAATGCAATGTAAATTGAGTAATAAGGCAGTCCAATTTATTTTGCAGTGATGCAGTCAATAGATTGGTCAACGTAACTTCAGAAACCATTGCTTCAGGAGATGACAATGGGTGTATCAAGGTTCTTTTTTTTGTCCTTGTCATTCTCTTTTCTGTTTCCTAATTTTCCGTTTCGTAACTACTTTGAAGATCTAACTGACTTGGAAAAGTAGAAAATTTAAAAAATAGAGAATTTGAGCACCAGAGTTTCTAATGAGCACAATATTATTATTACCTATAGAATTGGCCCTGAGTAATTACAGCTTTTGACATTCTACCATGGTTGATTTGGTCTTAAAAAAATTAGATAGAAGAACAAATGCTAGAGATGATAGGGTCGGCCCAACTTCAAGGGTTTAATGCAATAAAGACTTGTTGGATTGACAACCAAGGAACTTGAACTGACGTATACAGTATACTAGATTGCTGGTCCCTTTTGAAGAGACACTTGATGTGGACAACACGGTCTTTAGTCACATTAACTTCATTATTCATCGAGCTAAAGCTCTATACTTTGACTCAACTGAGACTGTAACGTGCCGCTACTTATTGTTTGAGCACCCGTAAATGGTTGTAGAACGGAGGAAACTCAGTAATAGGCTATGAGTAACTGATGTCAAATGTTGTGGTTTTCTTTGACATTCCAATGTCTTTTTGACTAACTGATGTTCCTTCAAGGTATGGGATACCAGACAACGATCTTGCTGCAATTCGTTTGAAGCTCATGAAGATTATATTTCAGATATGACCTATTCGTCTGATTCCATGAAACTTTTGGCTACAAGGTAATCCTTGCTATAACTAATATTTCTCTCCAGTTTTATTATCTTAATACTAGGAACATTTCTGAAGTTTGTTGAACTTGAGCCTTAGGATTTTTTTGTTGCTAGACTGAGGTATGACAATGGTTTTGTTATCTCTTGCTAAAATTTTTCCATTTAATTTATAGAGGTTTGAGATCACTTAAAGTTAGAAATTAAAAATGTTGTTTCTATCTATGAAGAGTTGCCATAAATTAATCTATAAGGTGTCAAGAAGCAATTTTATGAATTCCTATTTGTCGTCTTCTAGATACTACTCTCTTCTTCAGTGTGGAGAAATTGAATGCATTGTGGATTATATTAAGAAATTAGGTGACAACGTTATAGTAAACCTCGCTTTTTTTAAAAAAAATATTATATTGCCTCTTCCTCATGATTTTATCGTTTTTTCCTTTTTGTAGTGGAGATGGGACTCTATCTGTTTGCAATCTCAGGAGAAACAAGGTTAGCCGTTACAAGTTTGTTTCGACATAATTTGTGCCTCTACAACGTGTTAACTACTATCTTTTTACTATTTCCGTTTCTGTGTGCATACACATTTAAACTTGATATTAGTTTTCTGAAGTTGATTAAAAAAATTTATATTGCTTTTGTCGTTGATTAGTCTTATTTAAGTGCAGGTCCATGCTCGGTCCGAGTTTTCAGAAGTTGAGTTGCTATCTGTTGTTATCATGAAGGTAGCTTTACGTATGATGAAGTAGCAATCATATTTCAGTCATGCATTTACATATTTGTTTTGGAAGTTCGTTGGAGCTCGGTGAAATCTTATTTCCCTCCCCATCTTTTGTAAATTTTGTTTTTTCCAATGCAAAGATTGAAACCAGGCTGACAAATCTGGTTCAAATATAATTCGGAGTAATATATTTCATATGGGCGCATCATTCAGGAAACTTTGGTGGAAAAAAATGCTCTCCCCTCTCCCATAAACCATAACTGCCTTTTCTGAACCTCTGGTCACCCTAACCACAGCCATCCAACTTCACCTCCCTGTAATTTTAGCTTATTTCTTCATTTTTTTTTGTCAGAATGGACGTAAGGTCATCTGTGGATCACAAACTGGAACTCTATTATTGTATTCATGGGGTTGCTTCAAGGACTGCAGGTGTACATATATGATGATTTTTCTTGAATATGTATAATGTTTTGGTCTGATCATTTTAGTGAAACTAGGAATTCCTGCTTGTGCTAAGGTGTATTAATATTAATGCTACCTCTATTCTTTTCCTTTGTTGATTTAATCCTTATTTATTTTGTTTTAACTTCATTCTTCTTCAGTGATCGCTTTGTTGATCTCTCTCAAAACCCTGTGAATGCGTTGCTAAAGGTACGCATTTGTGTAATTGTCTAGCAGTATTGTCATTTTTAGTATCGTCAAGAAATCTTTCAATTACAGTGCTAGTTCTTTCCTTCCTTTTAGCTTGATGAAGACAGGGTCGTTGCTGCATCTGAGAGTGGACTCATCAGGTGAGAACTTTGGTGGATAGAGTCATCGTATTTTTATCTTCCCTTTGTTATATAGTTCACTTATTCATGTCTTTTTCATCAGTCTGGTAGGCGTATTACCCAACAGAATAATCCAACCAATTGCAGAACACTCAGACTATCCTGTGGAGCGGCTTGGTAAGATGTTTTTCTGTTTTGGCTGATATTAATCAGAGTTTTTTGAAGCTCGAGGTGCAAAAGAAATGCTGAGCTTTTTTTAATGAGGCACACAATTGTTTAATTTGTATAATTTCTTTTTAAAATGAAGAAAAATACTGTTACAAATAATAAGAGATGAAAAGTGTACGAAAATAGGCTTTTATTCTAGATGGGAAGGAAAAATGATTAGTTTTTAAGAATATTCTTGATTTCTTCCTGACAACTTAGAATTTTTTTTTTAAATAGTAGGAAGTAAGACGCCAAGTCATTTAGGTGCACTCCACAAGCACTAAGGTGTGCACCTCAAGCGGGCTTCATTAACGGAGCCTCATTTTTTTTTAAGTGGGGCGCAGGAGTTGTGCCACAGTGGGCTTTTAGAACAGATACTTAGTAATCCATATTTATTTTATGAATGAATTAACAACCTCGGGTTTCTTTCACCGTTAATTTCGCGTATGATTTGTGTTTTATGGTCTGTCAACATTCAATGATTTGCTTTTTTTTCTTCTTCTCTCTCCCCGTCACTCTGTTCAATCACTGCGTTACTTAAATTTAGGGGAAATGTTTAGTATAACATTTTAACAGTTTTGTCTTGTCTTGTAGCTTTTTCCCATGATAAAAAGTATCTCGGCAGTATTTCACATGATTATATGTTAAAGGTAATCATCTCTCTCTTTCTCTCTCGTTGTAACTGTTTTGATCTGCTGATTTCATTTTGGCTATCCCAAACTTTTGCTAGCATCTTTTTCTCCTTTTTAATATAAAAGAAAACCAATTTTCATTTCAATGAAAGAACTACAAACAAGGAAAGTCATAAAAAGAAGGGATTTATCAAAAGAGCAATAGCAACGCTGAAAATATACTAAAAAGAATAGAACCTCAACTTTTGGTAAACAAAAACAATAGATAATTACAAATAAGAAGTTTGAACGAAGAGCCCAAACAGAGCTGCAGAAGCATTAAAGAATGTCAAGTTCCTCCCATCTGCTATATCTTCCGAGAAACATTCTCCTATTCCATTTCAACCAGAAGAATCATAAAGCAGGTAAGGAGCTGGTCTGAGTCTTACCCCTCCCCAAAACAAACGGTCTAAAGCAACTTCTTCAATAGTCTCCCGAACAATCAACCTCTACCTTTAAGCTAGATTGAAGCATTGTCAGAATCGCCTCTAAACAATGATGTAAAAGTTCACATTTATTTTGGTTAAAGTCTCTTCTTGGTGAATAAAAATTAACAGGTTTTTTTTTTTGTTAAATTTGAAATTGCCATTAGAGTTATGGAGGCCTCACACTTTGTTTCACGTCTTCAAGCCTTTAATGAATTGTTCTCTTCCTATTTGTTGCCAGTTTATCGTTTATGACATATCAAGACTCTAATATCTGTGTTATTGTTTGTGCAGCTATGGGATATGGATTTATTGCAAAGTTCTGAAAACGTTTCAAATGGTCGGGCCGTGGTAGCTGCAGGTGCAAGTGCCAGTGACAATCTATTTGCTTTCATGTAAGCCCCGCATTTGGATTTGGACTTTAATTGAAACAACAATTAGGCTGCAAACATTTTGTTTGGTTTAGGTGGTTGGAAATAGGACTTAAATCTAGTGAAATGGACAAATCACTCTGATAGTTACAGTTTTTCTCCTTTTTCCCCCTATTTTTAGAGCGAGAGAGGATTGTCCTAAATCATTATTTCTCGACTGCTGGTTTGTACCAGGTGACATAATTAATGATATGGTGAAGTCATGGGACAATCCTCTCTCGCTCTAAAAATGTTATATTTAGGGAACCATCACATATTATATTTAGGATTACTCCTACAAGATCACTTCAGATTTTTATTAAATAAATCAAGAAGCCAACATCAGATTTTTACATCTCATCCATCACCTATCAAGTCTAAAACAGAAAGTATTCTGGCTACTCTAGTTGAATCATGTATGTTTTAAATACAATCTTATGCTTTTTGCAGGGACTAGAAGAGAGAAGACCTAAAGCGTAGGAAGGATCCAAAGAATGGTTTGAACAAATCGTCAATTTATAGTATGCTGGTTAGGATGATTTTGGGTTCAGCTCCTTCAGGGTGCATTTAGGATAGTATTTATATGGGTTTGAATATGATGCTACAACTGCAATTTTTTGATATATGGTGCCAACAAGTGATTGTTGATTTTCTCCATGAACCTGTTGAAGAGAGAGTGGTTAGGTGCGTTTGCTACACTTTTCTTTCAAAAGAATCATCTTGGCTTCGTAACATTTTTGGTTTTCCTTGGATGTTGGATATTTATGTTCTTATTGTTATTGTTGGATTATAATTTTCGACTCAGAATTAAATATCGAATGAGATGTAGATTTTTCTTTCTTTTGTTTGAGTCATTTCTTATGAGTTCAGGGTCGAGTTTCGGGCCAATTGATTGACTTTTTCTCATTGAAGTAGACTTGACTTCTCGTCTTCTCACAGCTCGACTTTTTTAGGCATATACTTGGAAGGAAATTAAAGGCAAAATGTTATAAAATAGATAAGAAGGAAAAAAGAATAATGTGAAGTAGAAGCAAAAACACTAAAAAGTGATAATTATTATGTTTTTGGAAACATTATTTGAAGCAATAAAGATTAGGACAGTGAATTAGTGATGAAGAAAAGACATCTCA

mRNA sequence

ATGGAAGTAAACCTTGGAGGCATTCCTTTTGACTTGGACTTCCATCCGTCTGAGCAGTTGGTTGCAGCTGGTCTGATTGACGGCAATCTTCTCTTGTACCGTTATAGTCCAAATGCTTTACCCCAAAGGCTCTTGAAAGTTCGTGCACATAGTGAATCTTGCAGAGCTGTTCGATTCATCAATGACGGACGTGCAATTTTGACTGGTTCTCCAGACCATTCCATTCTTGCTACAGATGTGGAGACTGGTTCTGTTATTGCTCGTCTTGAAGATGCTCATGATGATGCAGTCAATAGATTGGTCAACGTAACTTCAGAAACCATTGCTTCAGGAGATGACAATGGGTGTATCAAGGTATGGGATACCAGACAACGATCTTGCTGCAATTCGTTTGAAGCTCATGAAGATTATATTTCAGATATGACCTATTCGTCTGATTCCATGAAACTTTTGGCTACAAGTGGAGATGGGACTCTATCTGTTTGCAATCTCAGGAGAAACAAGGTCCATGCTCGGTCCGAGTTTTCAGAAGTTGAGTTGCTATCTGTTGTTATCATGAAGAATGGACGTAAGGTCATCTGTGGATCACAAACTGGAACTCTATTATTGTATTCATGGGGTTGCTTCAAGGACTGCAGTGATCGCTTTGTTGATCTCTCTCAAAACCCTGTGAATGCGTTGCTAAAGCTTGATGAAGACAGGGTCGTTGCTGCATCTGAGAGTGGACTCATCAGTCTGGTAGGCGTATTACCCAACAGAATAATCCAACCAATTGCAGAACACTCAGACTATCCTGTGGAGCGGCTTGCTTTTTCCCATGATAAAAAGTATCTCGGCAGTATTTCACATGATTATATGTTAAAGCTATGGGATATGGATTTATTGCAAAGTTCTGAAAACGTTTCAAATGGTCGGGCCGTGGTAGCTGCAGGTGCAAGTGCCAGTGACAATCTATTTGCTTTCATGGACTAGAAGAGAGAAGACCTAAAGCGTAGGAAGGATCCAAAGAATGGTTTGAACAAATCGTCAATTTATAGTATGCTGGTTAGGATGATTTTGGGTTCAGCTCCTTCAGGGTGCATTTAGGATAGTATTTATATGGGTTTGAATATGATGCTACAACTGCAATTTTTTGATATATGGTGCCAACAAGTGATTGTTGATTTTCTCCATGAACCTGTTGAAGAGAGAGTGGTTAGGTGCGTTTGCTACACTTTTCTTTCAAAAGAATCATCTTGGCTTCGTAACATTTTTGGTTTTCCTTGGATGTTGGATATTTATGTTCTTATTGTTATTGTTGGATTATAATTTTCGACTCAGAATTAAATATCGAATGAGATGTAGATTTTTCTTTCTTTTGTTTGAGTCATTTCTTATGAGTTCAGGGTCGAGTTTCGGGCCAATTGATTGACTTTTTCTCATTGAAGTAGACTTGACTTCTCGTCTTCTCACAGCTCGACTTTTTTAGGCATATACTTGGAAGGAAATTAAAGGCAAAATGTTATAAAATAGATAAGAAGGAAAAAAGAATAATGTGAAGTAGAAGCAAAAACACTAAAAAGTGATAATTATTATGTTTTTGGAAACATTATTTGAAGCAATAAAGATTAGGACAGTGAATTAGTGATGAAGAAAAGACATCTCA

Coding sequence (CDS)

ATGGAAGTAAACCTTGGAGGCATTCCTTTTGACTTGGACTTCCATCCGTCTGAGCAGTTGGTTGCAGCTGGTCTGATTGACGGCAATCTTCTCTTGTACCGTTATAGTCCAAATGCTTTACCCCAAAGGCTCTTGAAAGTTCGTGCACATAGTGAATCTTGCAGAGCTGTTCGATTCATCAATGACGGACGTGCAATTTTGACTGGTTCTCCAGACCATTCCATTCTTGCTACAGATGTGGAGACTGGTTCTGTTATTGCTCGTCTTGAAGATGCTCATGATGATGCAGTCAATAGATTGGTCAACGTAACTTCAGAAACCATTGCTTCAGGAGATGACAATGGGTGTATCAAGGTATGGGATACCAGACAACGATCTTGCTGCAATTCGTTTGAAGCTCATGAAGATTATATTTCAGATATGACCTATTCGTCTGATTCCATGAAACTTTTGGCTACAAGTGGAGATGGGACTCTATCTGTTTGCAATCTCAGGAGAAACAAGGTCCATGCTCGGTCCGAGTTTTCAGAAGTTGAGTTGCTATCTGTTGTTATCATGAAGAATGGACGTAAGGTCATCTGTGGATCACAAACTGGAACTCTATTATTGTATTCATGGGGTTGCTTCAAGGACTGCAGTGATCGCTTTGTTGATCTCTCTCAAAACCCTGTGAATGCGTTGCTAAAGCTTGATGAAGACAGGGTCGTTGCTGCATCTGAGAGTGGACTCATCAGTCTGGTAGGCGTATTACCCAACAGAATAATCCAACCAATTGCAGAACACTCAGACTATCCTGTGGAGCGGCTTGCTTTTTCCCATGATAAAAAGTATCTCGGCAGTATTTCACATGATTATATGTTAAAGCTATGGGATATGGATTTATTGCAAAGTTCTGAAAACGTTTCAAATGGTCGGGCCGTGGTAGCTGCAGGTGCAAGTGCCAGTGACAATCTATTTGCTTTCATGGACTAG

Protein sequence

MEVNLGGIPFDLDFHPSEQLVAAGLIDGNLLLYRYSPNALPQRLLKVRAHSESCRAVRFINDGRAILTGSPDHSILATDVETGSVIARLEDAHDDAVNRLVNVTSETIASGDDNGCIKVWDTRQRSCCNSFEAHEDYISDMTYSSDSMKLLATSGDGTLSVCNLRRNKVHARSEFSEVELLSVVIMKNGRKVICGSQTGTLLLYSWGCFKDCSDRFVDLSQNPVNALLKLDEDRVVAASESGLISLVGVLPNRIIQPIAEHSDYPVERLAFSHDKKYLGSISHDYMLKLWDMDLLQSSENVSNGRAVVAAGASASDNLFAFMD
Homology
[Close]
BLAST of Carg25781 vs. NCBI nr
Match: XP_022960342.1 (WD repeat-containing protein 55 [Cucurbita moschata])

HSP 1 Score: 642.9 bits (1657), Expect = 5.9e-181
Identity = 322/323 (99.69%), Postives = 322/323 (99.69%), Query Frame = 0 

Query: 1   MEVNLGGIPFDLDFHPSEQLVAAGLIDGNLLLYRYSPNALPQRLLKVRAHSESCRAVRFI 60
           MEVNLGGIPFDLDFHPSEQLVAAGLIDGNLLLYRYSPNALPQRLLKVRAHSESCRAVRFI
Sbjct: 1   MEVNLGGIPFDLDFHPSEQLVAAGLIDGNLLLYRYSPNALPQRLLKVRAHSESCRAVRFI 60

Query: 61  NDGRAILTGSPDHSILATDVETGSVIARLEDAHDDAVNRLVNVTSETIASGDDNGCIKVW 120
           NDGRAILTGSPDHSILATDVETGSVIARLEDAHDDAVNRLVNVTSETIASGDDNGCIKVW
Sbjct: 61  NDGRAILTGSPDHSILATDVETGSVIARLEDAHDDAVNRLVNVTSETIASGDDNGCIKVW 120

Query: 121 DTRQRSCCNSFEAHEDYISDMTYSSDSMKLLATSGDGTLSVCNLRRNKVHARSEFSEVEL 180
           DTRQRSCCNSFEAHEDYISDMTYSSDSMKLLATSGDGTLSVCNLRRNKVHARSEFSEVEL
Sbjct: 121 DTRQRSCCNSFEAHEDYISDMTYSSDSMKLLATSGDGTLSVCNLRRNKVHARSEFSEVEL 180

Query: 181 LSVVIMKNGRKVICGSQTGTLLLYSWGCFKDCSDRFVDLSQNPVNALLKLDEDRVVAASE 240
           LSVVIMKNGRKVICGSQTGTLLLYSWGCFKDCSDRFVDLSQNPVNALLKLDEDRVVAASE
Sbjct: 181 LSVVIMKNGRKVICGSQTGTLLLYSWGCFKDCSDRFVDLSQNPVNALLKLDEDRVVAASE 240

Query: 241 SGLISLVGVLPNRIIQPIAEHSDYPVERLAFSHDKKYLGSISHDYMLKLWDMDLLQSSEN 300
           SGLISLVGVLPNRIIQPIAEHSDYPVERLAFSHDKKYLGSISHDYMLKLWDMDLLQSSEN
Sbjct: 241 SGLISLVGVLPNRIIQPIAEHSDYPVERLAFSHDKKYLGSISHDYMLKLWDMDLLQSSEN 300

Query: 301 VSNGRAVVAAGASASDNLFAFMD 324
           VSNG AVVAAGASASDNLFAFMD
Sbjct: 301 VSNGPAVVAAGASASDNLFAFMD 323

[Close]
BLAST of Carg25781 vs. NCBI nr
Match: XP_023515082.1 (WD repeat-containing protein 55 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 638.6 bits (1646), Expect = 1.1e-179
Identity = 320/323 (99.07%), Postives = 321/323 (99.38%), Query Frame = 0 

Query: 1   MEVNLGGIPFDLDFHPSEQLVAAGLIDGNLLLYRYSPNALPQRLLKVRAHSESCRAVRFI 60
           MEVNLGGIPFDLDFHPSEQLVAAGLIDGNLLLYRYSPNALPQRLLKVRAHSESCRAVRFI
Sbjct: 1   MEVNLGGIPFDLDFHPSEQLVAAGLIDGNLLLYRYSPNALPQRLLKVRAHSESCRAVRFI 60

Query: 61  NDGRAILTGSPDHSILATDVETGSVIARLEDAHDDAVNRLVNVTSETIASGDDNGCIKVW 120
           N GRAILTGSPDHSILATDVETGSVIARLEDAHDDAVNRLVNVTSETIASGDDNGCIKVW
Sbjct: 61  NGGRAILTGSPDHSILATDVETGSVIARLEDAHDDAVNRLVNVTSETIASGDDNGCIKVW 120

Query: 121 DTRQRSCCNSFEAHEDYISDMTYSSDSMKLLATSGDGTLSVCNLRRNKVHARSEFSEVEL 180
           DTRQRSCCNSFEAHEDYISDMTYSSDSMKLLATSGDGTLSVCNLRRNKVHARSEFSEVEL
Sbjct: 121 DTRQRSCCNSFEAHEDYISDMTYSSDSMKLLATSGDGTLSVCNLRRNKVHARSEFSEVEL 180

Query: 181 LSVVIMKNGRKVICGSQTGTLLLYSWGCFKDCSDRFVDLSQNPVNALLKLDEDRVVAASE 240
           LSVVIMKNGRKVICGSQTGTLLLYSWGCFKDCSDRFVDLSQNPVNALLKLDEDRVVAASE
Sbjct: 181 LSVVIMKNGRKVICGSQTGTLLLYSWGCFKDCSDRFVDLSQNPVNALLKLDEDRVVAASE 240

Query: 241 SGLISLVGVLPNRIIQPIAEHSDYPVERLAFSHDKKYLGSISHDYMLKLWDMDLLQSSEN 300
           SGLISLVGVLPNRIIQPIAEHSDYPVERLAFSHDKK+LGSISHDYMLKLWDMDLLQSSEN
Sbjct: 241 SGLISLVGVLPNRIIQPIAEHSDYPVERLAFSHDKKFLGSISHDYMLKLWDMDLLQSSEN 300

Query: 301 VSNGRAVVAAGASASDNLFAFMD 324
           VSNG AVVAAGASASDNLFAFMD
Sbjct: 301 VSNGPAVVAAGASASDNLFAFMD 323

[Close]
BLAST of Carg25781 vs. NCBI nr
Match: XP_023004257.1 (WD repeat-containing protein 55 [Cucurbita maxima])

HSP 1 Score: 638.3 bits (1645), Expect = 1.4e-179
Identity = 319/323 (98.76%), Postives = 321/323 (99.38%), Query Frame = 0 

Query: 1   MEVNLGGIPFDLDFHPSEQLVAAGLIDGNLLLYRYSPNALPQRLLKVRAHSESCRAVRFI 60
           MEVNLGGIPFDLDFHPSEQLVAAGLIDGNLLLYRYSPNALPQRLLKVRAHSESCRAVRFI
Sbjct: 1   MEVNLGGIPFDLDFHPSEQLVAAGLIDGNLLLYRYSPNALPQRLLKVRAHSESCRAVRFI 60

Query: 61  NDGRAILTGSPDHSILATDVETGSVIARLEDAHDDAVNRLVNVTSETIASGDDNGCIKVW 120
           N GRAILTGSPDHSILATDVETGSVIARLEDAHDDAVNRLVNVTSETIASGDDNGCIKVW
Sbjct: 61  NGGRAILTGSPDHSILATDVETGSVIARLEDAHDDAVNRLVNVTSETIASGDDNGCIKVW 120

Query: 121 DTRQRSCCNSFEAHEDYISDMTYSSDSMKLLATSGDGTLSVCNLRRNKVHARSEFSEVEL 180
           DTRQRSCCNSFEAHEDYISDMTYSSDSMKLLATSGDGTLSVCNLRRNKVHARSEFSEVEL
Sbjct: 121 DTRQRSCCNSFEAHEDYISDMTYSSDSMKLLATSGDGTLSVCNLRRNKVHARSEFSEVEL 180

Query: 181 LSVVIMKNGRKVICGSQTGTLLLYSWGCFKDCSDRFVDLSQNPVNALLKLDEDRVVAASE 240
           LSVVIMKNGRKV+CGSQTGTLLLYSWGCFKDCSDRFVDLSQNPVNALLKLDEDRVVAASE
Sbjct: 181 LSVVIMKNGRKVVCGSQTGTLLLYSWGCFKDCSDRFVDLSQNPVNALLKLDEDRVVAASE 240

Query: 241 SGLISLVGVLPNRIIQPIAEHSDYPVERLAFSHDKKYLGSISHDYMLKLWDMDLLQSSEN 300
           SGLISLVGVLPNRIIQPIAEHSDYPVERLAFSHDKK+LGSISHDYMLKLWDMDLLQSSEN
Sbjct: 241 SGLISLVGVLPNRIIQPIAEHSDYPVERLAFSHDKKFLGSISHDYMLKLWDMDLLQSSEN 300

Query: 301 VSNGRAVVAAGASASDNLFAFMD 324
           VSNG AVVAAGASASDNLFAFMD
Sbjct: 301 VSNGPAVVAAGASASDNLFAFMD 323

[Close]
BLAST of Carg25781 vs. NCBI nr
Match: XP_022151710.1 (WD repeat-containing protein 55 [Momordica charantia])

HSP 1 Score: 608.6 bits (1568), Expect = 1.2e-170
Identity = 302/323 (93.50%), Postives = 312/323 (96.59%), Query Frame = 0 

Query: 1   MEVNLGGIPFDLDFHPSEQLVAAGLIDGNLLLYRYSPNALPQRLLKVRAHSESCRAVRFI 60
           MEVNLGGIPFDLDFHPSEQLVAAGLIDGNLLLYRY+ NALPQRLLKVRAHSESCRAVRFI
Sbjct: 1   MEVNLGGIPFDLDFHPSEQLVAAGLIDGNLLLYRYNANALPQRLLKVRAHSESCRAVRFI 60

Query: 61  NDGRAILTGSPDHSILATDVETGSVIARLEDAHDDAVNRLVNVTSETIASGDDNGCIKVW 120
           NDGRAILTGSPDHSILATDVETGSVIARLEDAHDDAVNRL+N+TSETIASGDDNGCIKVW
Sbjct: 61  NDGRAILTGSPDHSILATDVETGSVIARLEDAHDDAVNRLINLTSETIASGDDNGCIKVW 120

Query: 121 DTRQRSCCNSFEAHEDYISDMTYSSDSMKLLATSGDGTLSVCNLRRNKVHARSEFSEVEL 180
           DTRQRSCCN+FEAHEDYISDMT+SSDSMKLLATSGDGTLSVCNLRRNKVHARSEFSEVEL
Sbjct: 121 DTRQRSCCNTFEAHEDYISDMTFSSDSMKLLATSGDGTLSVCNLRRNKVHARSEFSEVEL 180

Query: 181 LSVVIMKNGRKVICGSQTGTLLLYSWGCFKDCSDRFVDLSQNPVNALLKLDEDRVVAASE 240
           LSVVIMKNGRKVICGSQTGTLLLYSWGCFKDCSDRFVDLSQNPVNALLKLDEDRVVAASE
Sbjct: 181 LSVVIMKNGRKVICGSQTGTLLLYSWGCFKDCSDRFVDLSQNPVNALLKLDEDRVVAASE 240

Query: 241 SGLISLVGVLPNRIIQPIAEHSDYPVERLAFSHDKKYLGSISHDYMLKLWDMDLLQSSEN 300
           SGLISLVG+LPNR+IQPIAEHSDYPVERLAFSHD+K+LGSISHDYMLKLWDMDLLQSS N
Sbjct: 241 SGLISLVGILPNRVIQPIAEHSDYPVERLAFSHDRKFLGSISHDYMLKLWDMDLLQSSGN 300

Query: 301 VSNGRAVVAAGASASDNLFAFMD 324
            SNG+  V   A  SDNLF FMD
Sbjct: 301 SSNGQTTV--DAPVSDNLFTFMD 321

[Close]
BLAST of Carg25781 vs. NCBI nr
Match: XP_008464963.1 (PREDICTED: WD repeat-containing protein 55 [Cucumis melo] >XP_008464964.1 PREDICTED: WD repeat-containing protein 55 [Cucumis melo] >XP_008464965.1 PREDICTED: WD repeat-containing protein 55 [Cucumis melo])

HSP 1 Score: 521.9 bits (1343), Expect = 1.5e-144
Identity = 260/323 (80.50%), Postives = 282/323 (87.31%), Query Frame = 0 

Query: 1   MEVNLGGIPFDLDFHPSEQLVAAGLIDGNLLLYRYSPNALPQRLLKVRAHSESCRAVRFI 60
           ME+NL  IPFDLDFHPS+QLVAAG+I GNL LYRY  NALPQ+L KVRAH +SCRAVRFI
Sbjct: 1   MEINLADIPFDLDFHPSDQLVAAGVIGGNLHLYRYDANALPQKLFKVRAHVKSCRAVRFI 60

Query: 61  NDGRAILTGSPDHSILATDVETGSVIARLEDAHDDAVNRLVNVTSETIASGDDNGCIKVW 120
           NDGRAILTGS DHSIL+TDVETGSVIARLEDAHD+AV++L+N+TSETIASGDDNG IKVW
Sbjct: 61  NDGRAILTGSSDHSILSTDVETGSVIARLEDAHDEAVSKLINITSETIASGDDNGAIKVW 120

Query: 121 DTRQRSCCNSFEAHEDYISDMTYSSDSMKLLATSGDGTLSVCNLRRNKVHARSEFSEVEL 180
           DTRQRSCC+SF+AHEDYISDMTYSSDS KLLATSGDG         NK+HARSEFSE EL
Sbjct: 121 DTRQRSCCSSFKAHEDYISDMTYSSDSTKLLATSGDGXXXXXXXXXNKIHARSEFSEEEL 180

Query: 181 LSVVIMKNGRKVICGSQTGTLLLYSWGCFKDCSDRFVDLSQNPVNALLKLDEDRVVAASE 240
           LSVV MKNGRKVICGSQ GTLLLYSWG F+DCSDRFVD SQNPVNALLKLDEDRV+ ASE
Sbjct: 181 LSVVTMKNGRKVICGSQNGTLLLYSWGFFQDCSDRFVDASQNPVNALLKLDEDRVIVASE 240

Query: 241 SGLISLVGVLPNRIIQPIAEHSDYPVERLAFSHDKKYLGSISHDYMLKLWDMDLLQSSEN 300
           SGLISLVG+LPNR+IQPIAEHSDYPVERLAFSHD+K+LGSISHDYM+KLWDMDLLQSS  
Sbjct: 241 SGLISLVGILPNRVIQPIAEHSDYPVERLAFSHDRKFLGSISHDYMIKLWDMDLLQSS-- 300

Query: 301 VSNGRAVVAAGASASDNLFAFMD 324
              G A     ASAS N F F +
Sbjct: 301 ---GNAPTTVEASASVNSFTFTE 318

[Close]
BLAST of Carg25781 vs. TAIR10
Match: AT2G34260.1 (transducin family protein / WD-40 repeat family protein)

HSP 1 Score: 433.3 bits (1113), Expect = 1.3e-121
Identity = 211/304 (69.41%), Postives = 252/304 (82.89%), Query Frame = 0 

Query: 1   MEVNLGGIPFDLDFHPSEQLVAAGLIDGNLLLYRYSPNALPQRLLKVRAHSESCRAVRFI 60
           ME++LG   F +DFHPS  LVAAGLIDG+L LYRY  ++   R  KVRAH ESCRAVRFI
Sbjct: 1   MEIDLGANAFGIDFHPSTNLVAAGLIDGHLHLYRYDSDSSLVRERKVRAHKESCRAVRFI 60

Query: 61  NDGRAILTGSPDHSILATDVETGSVIARLEDAHDDAVNRLVNVTSETIASGDDNGCIKVW 120
           +DG+ I+T S D SILATDVETG+ +A LE+AH+DAVN L+NVT  TIASGDD GC+K+W
Sbjct: 61  DDGQRIVTASADCSILATDVETGAQVAHLENAHEDAVNTLINVTETTIASGDDKGCVKIW 120

Query: 121 DTRQRSCCNSFEAHEDYISDMTYSSDSMKLLATSGDGTLSVCNLRRNKVHARSEFSEVEL 180
           DTRQRSC + F AHEDYIS MT++SDSMKL+ TSGDGTLSVCNLR +KV ++SEFSE EL
Sbjct: 121 DTRQRSCSHEFNAHEDYISGMTFASDSMKLVVTSGDGTLSVCNLRTSKVQSQSEFSEDEL 180

Query: 181 LSVVIMKNGRKVICGSQTGTLLLYSWGCFKDCSDRFVDLSQNPVNALLKLDEDRVVAASE 240
           LSVVIMKNGRKVICG+Q GTLLLYSWG FKDCSDRFVDL+ N V+ALLKLDEDR++   +
Sbjct: 181 LSVVIMKNGRKVICGTQNGTLLLYSWGFFKDCSDRFVDLAPNSVDALLKLDEDRLITGCD 240

Query: 241 SGLISLVGVLPNRIIQPIAEHSDYPVERLAFSHDKKYLGSISHDYMLKLWDMDLLQSSEN 300
           +G+ISLVG+LPNRIIQPI  H DYP+E LA SHDKK+LGS +HD MLKLW+++ +    N
Sbjct: 241 NGIISLVGILPNRIIQPIGSH-DYPIEDLALSHDKKFLGSTAHDSMLKLWNLEEILEGSN 300

Query: 301 VSNG 305
           V++G
Sbjct: 301 VNSG 303

[Close]
BLAST of Carg25781 vs. TAIR10
Match: AT4G03020.1 (transducin family protein / WD-40 repeat family protein)

HSP 1 Score: 44.7 bits (104), Expect = 1.3e-04
Identity = 32/117 (27.35%), Postives = 53/117 (45.30%), Query Frame = 0 

Query: 56  AVRFINDGRAILTGSPDHSILATDVETGSVIARLEDAHDDAVNRL--VNVTSETIASGDD 115
           +V+F  DGR ++ GS D SI   D+E   V  R   AH   VN +   + +   I SG D
Sbjct: 234 SVKFSTDGREVVAGSSDDSIYVYDLEANRVSLRTV-AHTSDVNTVCFADESGNLILSGSD 293

Query: 116 NGCIKVWDTR----QRSCCNSFEAHEDYISDMTYSSDSMKLLATSGDGTLSVCNLRR 167
           +   KVWD R    +         H + ++ +    D    ++   D T+ + ++R+
Sbjct: 294 DNLCKVWDRRCFIGRDKPAGVLVGHLEGVTFIDSRGDGRYFISNGKDQTIKLWDIRK 349

[Close]
BLAST of Carg25781 vs. Swiss-Prot
Match: sp|O80775|WDR55_ARATH (WD repeat-containing protein 55 OS=Arabidopsis thaliana OX=3702 GN=WDR55 PE=1 SV=2)

HSP 1 Score: 433.3 bits (1113), Expect = 2.3e-120
Identity = 211/304 (69.41%), Postives = 252/304 (82.89%), Query Frame = 0 

Query: 1   MEVNLGGIPFDLDFHPSEQLVAAGLIDGNLLLYRYSPNALPQRLLKVRAHSESCRAVRFI 60
           ME++LG   F +DFHPS  LVAAGLIDG+L LYRY  ++   R  KVRAH ESCRAVRFI
Sbjct: 1   MEIDLGANAFGIDFHPSTNLVAAGLIDGHLHLYRYDSDSSLVRERKVRAHKESCRAVRFI 60

Query: 61  NDGRAILTGSPDHSILATDVETGSVIARLEDAHDDAVNRLVNVTSETIASGDDNGCIKVW 120
           +DG+ I+T S D SILATDVETG+ +A LE+AH+DAVN L+NVT  TIASGDD GC+K+W
Sbjct: 61  DDGQRIVTASADCSILATDVETGAQVAHLENAHEDAVNTLINVTETTIASGDDKGCVKIW 120

Query: 121 DTRQRSCCNSFEAHEDYISDMTYSSDSMKLLATSGDGTLSVCNLRRNKVHARSEFSEVEL 180
           DTRQRSC + F AHEDYIS MT++SDSMKL+ TSGDGTLSVCNLR +KV ++SEFSE EL
Sbjct: 121 DTRQRSCSHEFNAHEDYISGMTFASDSMKLVVTSGDGTLSVCNLRTSKVQSQSEFSEDEL 180

Query: 181 LSVVIMKNGRKVICGSQTGTLLLYSWGCFKDCSDRFVDLSQNPVNALLKLDEDRVVAASE 240
           LSVVIMKNGRKVICG+Q GTLLLYSWG FKDCSDRFVDL+ N V+ALLKLDEDR++   +
Sbjct: 181 LSVVIMKNGRKVICGTQNGTLLLYSWGFFKDCSDRFVDLAPNSVDALLKLDEDRLITGCD 240

Query: 241 SGLISLVGVLPNRIIQPIAEHSDYPVERLAFSHDKKYLGSISHDYMLKLWDMDLLQSSEN 300
           +G+ISLVG+LPNRIIQPI  H DYP+E LA SHDKK+LGS +HD MLKLW+++ +    N
Sbjct: 241 NGIISLVGILPNRIIQPIGSH-DYPIEDLALSHDKKFLGSTAHDSMLKLWNLEEILEGSN 300

Query: 301 VSNG 305
           V++G
Sbjct: 301 VNSG 303

[Close]
BLAST of Carg25781 vs. Swiss-Prot
Match: sp|Q54SA5|WDR55_DICDI (WD repeat-containing protein 55 homolog OS=Dictyostelium discoideum OX=44689 GN=wdr55 PE=3 SV=1)

HSP 1 Score: 220.7 bits (561), Expect = 2.4e-56
Identity = 114/291 (39.18%), Postives = 180/291 (61.86%), Query Frame = 0 

Query: 2   EVNLGGIPFDLDFHPSEQLVAAGLIDGNLLLYRYSPNALPQRLLKVRAHSESCRAVRFIN 61
           +++   IPF L+FHP+E L+     +G L L++YS +    + L +R H   CR   F +
Sbjct: 15  DISFNTIPFSLNFHPTEDLLVVSDAEGRLKLFKYSLDENEVK-LSLRPHQSGCRQANFSS 74

Query: 62  DGRAILTGSPDHSILATDVETGSVIARLEDAHDDAVNRLVNVTSETIASGDDNGCIKVWD 121
           DG+ I T S D S+   D+ TGS++   E+AHD  +N LV+     + +GDD G IKVWD
Sbjct: 75  DGKYIFTASSDCSMKVIDINTGSILYTREEAHDYPINCLVS-KEFMVFTGDDEGTIKVWD 134

Query: 122 TRQRSCCNSFEAHEDYISDMTYSSDSMKLLATSGDGTLSVCNLRRNKVHARSEFSEVELL 181
            RQ++    F+ H D+ISD+T + D   + ATSGDG +S+ N  R  +   SE S+ ELL
Sbjct: 135 MRQQNIVCEFQEHGDFISDIT-TIDDRHIAATSGDGGVSIYNFVRKSMDDISEKSDNELL 194

Query: 182 SVVIMKNGRKVICGSQTGTLLLYSWGCFKDCSDRFVDLSQNPVNALLKLDEDRVVAASES 241
           S + + NG+K++CGSQ G++L+Y     ++   +F    Q+ V+AL+K++ +   + S  
Sbjct: 195 SCLSLDNGQKLVCGSQDGSILIYDRNNLENVK-KFAGHPQS-VDALVKVNNNTFFSGSSD 254

Query: 242 GLISLVGVLPNRIIQPIAEHSDYPVERLAFSHDKKYLGSISHDYMLKLWDM 293
           G+I  +G+ P +++  + EHS +P+ER+A S D +YLGSISHD+ LK W++
Sbjct: 255 GIIRFIGLRPKKLLGVVGEHSTFPIERMAISRDNRYLGSISHDFSLKFWNV 300

[Close]
BLAST of Carg25781 vs. Swiss-Prot
Match: sp|Q58DT8|WDR55_BOVIN (WD repeat-containing protein 55 OS=Bos taurus OX=9913 GN=WDR55 PE=2 SV=1)

HSP 1 Score: 214.5 bits (545), Expect = 1.7e-54
Identity = 114/287 (39.72%), Postives = 163/287 (56.79%), Query Frame = 0 

Query: 12  LDFHPSEQLVAAGLIDGNLLLYRYS-PNALPQRLLKVRAHSESCRAVRFINDGRAILTGS 71
           L FHP+  L+AAG +DG++ ++ YS      + L     H +SCRAV F  DG+ ++T S
Sbjct: 44  LAFHPARDLLAAGDVDGDVFVFSYSCQEGETKELWSSGHHLKSCRAVVFSEDGQKLVTVS 103

Query: 72  PDHSILATDVETGSVIARLEDAHDDAVNRLVNVTSETIASGDDNGCIKVWDTRQRSCCNS 131
            D +I   DVE G +  R+  AH   +N L+ V    +A+GDD G I++WD R+      
Sbjct: 104 KDKAIHFLDVELGRLERRISKAHGAPINSLLLVDENVLATGDDTGGIRLWDQRKEGPLMD 163

Query: 132 FEAHEDYISDMTYSSDSMKLLATSGDGTLSVCNLRRNKVHARSEFSEVELLSVVIMKNGR 191
              HE+YI+DM    D   LL  SGDG L V N++R +    SE    +L SV +MK GR
Sbjct: 164 MRQHEEYIADMALDPDKKLLLTASGDGCLGVFNIKRRRFELLSEPQSGDLTSVTLMKYGR 223

Query: 192 KVICGSQTGTLLLYSWGCFKDCSDRFVDLSQNPVNALLKLDEDRVVAASESGLISLVGVL 251
           KV CGS  GT+ L++W  F   SDRF  L    ++ ++ + E  + A S  G+I  V +L
Sbjct: 224 KVACGSSEGTIYLFNWDGFGATSDRFA-LRAESIDCMVPVTESLLCAGSTDGVIRAVNIL 283

Query: 252 PNRIIQPIAEHSDYPVERLAFSHDKKYLGSISHDYMLKLWDMDLLQS 298
           PNR++  + +H++ PVE LA SH   +L S  HD  LK WDM  L++
Sbjct: 284 PNRVVGSVGQHAEEPVENLALSHCGCFLASSGHDQRLKFWDMAQLRA 329

[Close]
BLAST of Carg25781 vs. Swiss-Prot
Match: sp|B2ZZS9|WDR55_ORYLA (WD repeat-containing protein 55 OS=Oryzias latipes OX=8090 GN=wdr55 PE=1 SV=1)

HSP 1 Score: 209.9 bits (533), Expect = 4.2e-53
Identity = 107/298 (35.91%), Postives = 167/298 (56.04%), Query Frame = 0 

Query: 2   EVNLGGIPFDLDFHPSEQLVAAGLIDGNLLLYRYS-PNALPQRLLKVRAHSESCRAVRFI 61
           ++ L  I   +  HPS  ++  G +DG++  Y YS      + L     H +SCR VRF 
Sbjct: 50  DIRLEAIANTVALHPSRDVLVCGDVDGDVYAYAYSCTEGETRELWSSGHHLKSCRQVRFS 109

Query: 62  NDGRAILTGSPDHSILATDVETGSVIARLEDAHDDAVNRLVNVTSETIASGDDNGCIKVW 121
            DG  + + S D ++   DVE G +++R+  AH  A+N L+ V    +A+GDD G +KVW
Sbjct: 110 ADGLKLYSVSRDKAVHQLDVERGQLVSRIRGAHAAAINSLLLVDENILATGDDRGTLKVW 169

Query: 122 DTRQRSCCNSFEAHEDYISDMTYSSDSMKLLATSGDGTLSVCNLRRNKVHARSEFSEVEL 181
           D R+       + H+DYISD+        LL TSGDGT+ V N++R +    SEF   +L
Sbjct: 170 DMRKGEAFMDLKHHDDYISDIAVDQAKRILLTTSGDGTMGVFNIKRRRFELLSEFQSGDL 229

Query: 182 LSVVIMKNGRKVICGSQTGTLLLYSWGCFKDCSDRFVDLSQNPVNALLKLDEDRVVAASE 241
            SV +MK G+KV+CGS  GT+ +++W  F   SDRF  +    V+ ++ + +  +  AS 
Sbjct: 230 TSVALMKRGKKVVCGSSEGTVYIFNWNGFGATSDRFA-VKAESVDCIVPITDSIMCTASM 289

Query: 242 SGLISLVGVLPNRIIQPIAEHSDYPVERLAFSHDKKYLGSISHDYMLKLWDMDLLQSS 299
            G I  + +LPNR+I  I +H   P+E +  S D ++L S +HD ++K W++  LQ +
Sbjct: 290 DGYIRAINLLPNRVIGCIGQHVGEPIEEINKSWDSRFLVSCAHDQLIKFWEISNLQKT 346

[Close]
BLAST of Carg25781 vs. Swiss-Prot
Match: sp|A1L112|WDR55_RAT (WD repeat-containing protein 55 OS=Rattus norvegicus OX=10116 GN=Wdr55 PE=2 SV=1)

HSP 1 Score: 209.9 bits (533), Expect = 4.2e-53
Identity = 110/287 (38.33%), Postives = 160/287 (55.75%), Query Frame = 0 

Query: 12  LDFHPSEQLVAAGLIDGNLLLYRYS-PNALPQRLLKVRAHSESCRAVRFINDGRAILTGS 71
           L FHP+  L+AAG +DG++ ++ YS      + L     H +SCRAV F  DG+ ++T S
Sbjct: 44  LAFHPTRDLLAAGDVDGDVFVFAYSCQEGETKELWSSGHHLKSCRAVVFSEDGQKLVTVS 103

Query: 72  PDHSILATDVETGSVIARLEDAHDDAVNRLVNVTSETIASGDDNGCIKVWDTRQRSCCNS 131
            D +I   DVE G +  R+  AH   +N L+ V    + +GDD G I++WD R+      
Sbjct: 104 KDKAIHVLDVEQGQLERRISKAHSAPINSLLLVDENVLVTGDDTGGIRLWDQRKEGPLMD 163

Query: 132 FEAHEDYISDMTYSSDSMKLLATSGDGTLSVCNLRRNKVHARSEFSEVELLSVVIMKNGR 191
              HE+YI+DM        LL  SGDG L V N++R +    SE    +L SV +MK G+
Sbjct: 164 MRQHEEYIADMALDPAKKLLLTASGDGCLGVFNIKRRRFELLSEPQSGDLTSVALMKYGK 223

Query: 192 KVICGSQTGTLLLYSWGCFKDCSDRFVDLSQNPVNALLKLDEDRVVAASESGLISLVGVL 251
           KV CGS  GT+ L++W  F   SDRF  L    ++ ++ + E+ +   S  G+I  V +L
Sbjct: 224 KVACGSSEGTIYLFNWNGFGATSDRFA-LRAESIDCMVPVTENLLCTGSTDGIIRAVNIL 283

Query: 252 PNRIIQPIAEHSDYPVERLAFSHDKKYLGSISHDYMLKLWDMDLLQS 298
           PNR++  + +H+  PVE LA SH   +L S  HD  LK WDM  L++
Sbjct: 284 PNRVVGTVGQHAGEPVEELALSHCGHFLASSGHDQRLKFWDMTQLRT 329

[Close]
BLAST of Carg25781 vs. TrEMBL
Match: tr|A0A1S3CPA6|A0A1S3CPA6_CUCME (WD repeat-containing protein 55 OS=Cucumis melo OX=3656 GN=LOC103502709 PE=4 SV=1)

HSP 1 Score: 521.9 bits (1343), Expect = 1.0e-144
Identity = 260/323 (80.50%), Postives = 282/323 (87.31%), Query Frame = 0 

Query: 1   MEVNLGGIPFDLDFHPSEQLVAAGLIDGNLLLYRYSPNALPQRLLKVRAHSESCRAVRFI 60
           ME+NL  IPFDLDFHPS+QLVAAG+I GNL LYRY  NALPQ+L KVRAH +SCRAVRFI
Sbjct: 1   MEINLADIPFDLDFHPSDQLVAAGVIGGNLHLYRYDANALPQKLFKVRAHVKSCRAVRFI 60

Query: 61  NDGRAILTGSPDHSILATDVETGSVIARLEDAHDDAVNRLVNVTSETIASGDDNGCIKVW 120
           NDGRAILTGS DHSIL+TDVETGSVIARLEDAHD+AV++L+N+TSETIASGDDNG IKVW
Sbjct: 61  NDGRAILTGSSDHSILSTDVETGSVIARLEDAHDEAVSKLINITSETIASGDDNGAIKVW 120

Query: 121 DTRQRSCCNSFEAHEDYISDMTYSSDSMKLLATSGDGTLSVCNLRRNKVHARSEFSEVEL 180
           DTRQRSCC+SF+AHEDYISDMTYSSDS KLLATSGDG         NK+HARSEFSE EL
Sbjct: 121 DTRQRSCCSSFKAHEDYISDMTYSSDSTKLLATSGDGXXXXXXXXXNKIHARSEFSEEEL 180

Query: 181 LSVVIMKNGRKVICGSQTGTLLLYSWGCFKDCSDRFVDLSQNPVNALLKLDEDRVVAASE 240
           LSVV MKNGRKVICGSQ GTLLLYSWG F+DCSDRFVD SQNPVNALLKLDEDRV+ ASE
Sbjct: 181 LSVVTMKNGRKVICGSQNGTLLLYSWGFFQDCSDRFVDASQNPVNALLKLDEDRVIVASE 240

Query: 241 SGLISLVGVLPNRIIQPIAEHSDYPVERLAFSHDKKYLGSISHDYMLKLWDMDLLQSSEN 300
           SGLISLVG+LPNR+IQPIAEHSDYPVERLAFSHD+K+LGSISHDYM+KLWDMDLLQSS  
Sbjct: 241 SGLISLVGILPNRVIQPIAEHSDYPVERLAFSHDRKFLGSISHDYMIKLWDMDLLQSS-- 300

Query: 301 VSNGRAVVAAGASASDNLFAFMD 324
              G A     ASAS N F F +
Sbjct: 301 ---GNAPTTVEASASVNSFTFTE 318

[Close]
BLAST of Carg25781 vs. TrEMBL
Match: tr|A0A2P6RDS7|A0A2P6RDS7_ROSCH (Putative transcription factor WD40-like family OS=Rosa chinensis OX=74649 GN=RchiOBHm_Chr3g0480691 PE=4 SV=1)

HSP 1 Score: 508.4 bits (1308), Expect = 1.1e-140
Identity = 245/309 (79.29%), Postives = 278/309 (89.97%), Query Frame = 0 

Query: 1   MEVNLGGIPFDLDFHPSEQLVAAGLIDGNLLLYRYSPNALPQRLLKVRAHSESCRAVRFI 60
           ME+NLG + FDLDFHPSEQLV  GLIDG+L LYRYS  ++P+R+L+V AHSESCRA RF+
Sbjct: 1   MEINLGKLAFDLDFHPSEQLVTTGLIDGDLHLYRYSSGSVPERVLEVHAHSESCRAARFV 60

Query: 61  NDGRAILTGSPDHSILATDVETGSVIARLEDAHDDAVNRLVNVTSETIASGDDNGCIKVW 120
           N G AILTGSPDH+ILATDVETGS IARLE+AH+DA+NRL+N+T+ TIASGDD GCIKVW
Sbjct: 61  NGGSAILTGSPDHTILATDVETGSAIARLENAHEDAINRLINLTASTIASGDDAGCIKVW 120

Query: 121 DTRQRSCCNSFEAHEDYISDMTYSSDSMKLLATSGDGTLSVCNLRRNKVHARSEFSEVEL 180
           DTRQRSCCNSF+AHEDYISDMT+S+DSMKLL TSGDGTLSVCNLRRNKV  +SEFSE EL
Sbjct: 121 DTRQRSCCNSFQAHEDYISDMTFSADSMKLLGTSGDGTLSVCNLRRNKVQDKSEFSEDEL 180

Query: 181 LSVVIMKNGRKVICGSQTGTLLLYSWGCFKDCSDRFVDLSQNPVNALLKLDEDRVVAASE 240
           LSVVIMKNG+KVIC SQTG +LLYSWGCFKDCSDRF+DLS N V+ALLKLDEDR++A SE
Sbjct: 181 LSVVIMKNGQKVICSSQTGNILLYSWGCFKDCSDRFIDLSPNSVDALLKLDEDRLIAGSE 240

Query: 241 SGLISLVGVLPNRIIQPIAEHSDYPVERLAFSHDKKYLGSISHDYMLKLWDM-DLLQSSE 300
           +GLISLVG+LPNRIIQPIAEHS+YPVERLAFSHDKK+LGSI+HD MLKLWDM D+LQ S 
Sbjct: 241 TGLISLVGILPNRIIQPIAEHSEYPVERLAFSHDKKFLGSIAHDQMLKLWDMDDILQGSG 300

Query: 301 NVSNGRAVV 309
           N S  +A V
Sbjct: 301 NTSRTQATV 309

[Close]
BLAST of Carg25781 vs. TrEMBL
Match: tr|A0A2I4E902|A0A2I4E902_9ROSI (WD repeat-containing protein 55 isoform X1 OS=Juglans regia OX=51240 GN=LOC108987423 PE=4 SV=1)

HSP 1 Score: 496.5 bits (1277), Expect = 4.5e-137
Identity = 239/307 (77.85%), Postives = 274/307 (89.25%), Query Frame = 0 

Query: 1   MEVNLGGIPFDLDFHPSEQLVAAGLIDGNLLLYRYSPNALPQRLLKVRAHSESCRAVRFI 60
           ME+NLG + FDLDFHPS +LV+AGLI+G+L LYRY  NALPQRLL+VRAH+ESCRAVRFI
Sbjct: 1   MEINLGRLAFDLDFHPSSELVSAGLINGDLHLYRYGANALPQRLLEVRAHTESCRAVRFI 60

Query: 61  NDGRAILTGSPDHSILATDVETGSVIARLEDAHDDAVNRLVNVTSETIASGDDNGCIKVW 120
           + GRAI T SPD SILATDVETGS IARLEDAH DA+NRL+N++  TIASGDD GCIKVW
Sbjct: 61  DGGRAIATCSPDRSILATDVETGSPIARLEDAHGDAINRLINISETTIASGDDEGCIKVW 120

Query: 121 DTRQRSCCNSFEAHEDYISDMTYSSDSMKLLATSGDGTLSVCNLRRNKVHARSEFSEVEL 180
           DTRQRSCCNSF+AH DY+SDMT+ SD+ KLL+TSGDGTLSVC+LRRNKV A+SEFSE EL
Sbjct: 121 DTRQRSCCNSFDAHHDYVSDMTFVSDAFKLLSTSGDGTLSVCSLRRNKVQAQSEFSEEEL 180

Query: 181 LSVVIMKNGRKVICGSQTGTLLLYSWGCFKDCSDRFVDLSQNPVNALLKLDEDRVVAASE 240
           LSVVIMKNGRKVICGSQ GTLLLYSWGCFKDCSDRF+DLS N ++ALLKLDEDR++  SE
Sbjct: 181 LSVVIMKNGRKVICGSQAGTLLLYSWGCFKDCSDRFIDLSPNSIDALLKLDEDRIITGSE 240

Query: 241 SGLISLVGVLPNRIIQPIAEHSDYPVERLAFSHDKKYLGSISHDYMLKLWDM-DLLQSSE 300
           +GLISLVG+LPNRIIQPIAEHS+YPVERLAFSHD+K+LGSI+HD MLKLWD+ D+LQ+S 
Sbjct: 241 NGLISLVGILPNRIIQPIAEHSEYPVERLAFSHDRKFLGSIAHDQMLKLWDLDDILQTSG 300

Query: 301 NVSNGRA 307
                +A
Sbjct: 301 KTPTSQA 307

[Close]
BLAST of Carg25781 vs. TrEMBL
Match: tr|A0A2P5EB29|A0A2P5EB29_9ROSA (WD repeat protein OS=Trema orientalis OX=63057 GN=TorRG33x02_215340 PE=4 SV=1)

HSP 1 Score: 496.1 bits (1276), Expect = 5.9e-137
Identity = 241/319 (75.55%), Postives = 284/319 (89.03%), Query Frame = 0 

Query: 1   MEVNLGGIPFDLDFHPSEQLVAAGLIDGNLLLYRYSPNALPQRLLKVRAHSESCRAVRFI 60
           ME+NLG +PFDLDFHPS+ LV+A LI+G+LLLYRYS ++ PQRLL+V AH+ESCRA+RFI
Sbjct: 1   MEINLGSLPFDLDFHPSDHLVSAALINGHLLLYRYSADSSPQRLLEVHAHTESCRALRFI 60

Query: 61  NDGRAILTGSPDHSILATDVETGSVIARLEDAHDDAVNRLVNVTSETIASGDDNGCIKVW 120
           +DGRAI+TGSPD SILATDVETGS IARLEDAH++A+N+++N+T  TIASGDD GCIKVW
Sbjct: 61  HDGRAIVTGSPDKSILATDVETGSAIARLEDAHEEAINKIINLTDSTIASGDDRGCIKVW 120

Query: 121 DTRQRSCCNSFEAHEDYISDMTYSSDSMKLLATSGDGTLSVCNLRRNKVHARSEFSEVEL 180
           DTRQRSCCN+F AHE+YISDMT+SSDSMKLL TSGDGTLSVCNLRRNKV ++SEFSE EL
Sbjct: 121 DTRQRSCCNTFNAHEEYISDMTFSSDSMKLLGTSGDGTLSVCNLRRNKVQSQSEFSEDEL 180

Query: 181 LSVVIMKNGRKVICGSQTGTLLLYSWGCFKDCSDRFVDLSQNPVNALLKLDEDRVVAASE 240
           LSVVIMKNGRKV+CGSQTGTLLLYSWG FKDCSDRFVDLS N V+ALLKLDEDR++  SE
Sbjct: 181 LSVVIMKNGRKVVCGSQTGTLLLYSWGYFKDCSDRFVDLSPNSVDALLKLDEDRIITGSE 240

Query: 241 SGLISLVGVLPNRIIQPIAEHSDYPVERLAFSHDKKYLGSISHDYMLKLWDM-DLLQSSE 300
           +GLI+L+ +LPNRIIQPIAEHS+YP+ERLA SHD+K+LGSI+HD MLK+WDM DLLQ S 
Sbjct: 241 NGLINLLSILPNRIIQPIAEHSEYPIERLALSHDRKFLGSIAHDSMLKIWDMDDLLQDSG 300

Query: 301 NVSNGRAVVAAGASASDNL 319
           N  N R+  AA  + S+ +
Sbjct: 301 N--NLRSQAAAEDNDSNEM 317

[Close]
BLAST of Carg25781 vs. TrEMBL
Match: tr|A0A2P5BML3|A0A2P5BML3_PARAD (WD repeat protein OS=Parasponia andersonii OX=3476 GN=PanWU01x14_226780 PE=4 SV=1)

HSP 1 Score: 495.0 bits (1273), Expect = 1.3e-136
Identity = 243/319 (76.18%), Postives = 282/319 (88.40%), Query Frame = 0 

Query: 1   MEVNLGGIPFDLDFHPSEQLVAAGLIDGNLLLYRYSPNALPQRLLKVRAHSESCRAVRFI 60
           ME+NLG +PFDLDFHPS+ LV+A LI G+LLLYRYS ++ PQRLL+V AH+ESCRA+RFI
Sbjct: 1   MEINLGSLPFDLDFHPSDHLVSAALISGHLLLYRYSADSSPQRLLEVHAHTESCRALRFI 60

Query: 61  NDGRAILTGSPDHSILATDVETGSVIARLEDAHDDAVNRLVNVTSETIASGDDNGCIKVW 120
           +DGRAI+TGSPD SILATDVETGS IARLEDAH++A+N+++N+T  TIASGDD GCIKVW
Sbjct: 61  HDGRAIVTGSPDKSILATDVETGSAIARLEDAHEEAINKIINLTDSTIASGDDRGCIKVW 120

Query: 121 DTRQRSCCNSFEAHEDYISDMTYSSDSMKLLATSGDGTLSVCNLRRNKVHARSEFSEVEL 180
           DTRQRSCCN+F AHE+YISDMT+SSDSMKLL TSGDGTLSVCNLRRNKV ++SEFSE EL
Sbjct: 121 DTRQRSCCNTFNAHEEYISDMTFSSDSMKLLGTSGDGTLSVCNLRRNKVQSQSEFSEDEL 180

Query: 181 LSVVIMKNGRKVICGSQTGTLLLYSWGCFKDCSDRFVDLSQNPVNALLKLDEDRVVAASE 240
           LSVVIMKNGRKV+CGSQTGTLLLYSWG F DCSDRFVDLS N V+ALLKLDEDR+V  SE
Sbjct: 181 LSVVIMKNGRKVVCGSQTGTLLLYSWGYFMDCSDRFVDLSPNSVDALLKLDEDRIVTGSE 240

Query: 241 SGLISLVGVLPNRIIQPIAEHSDYPVERLAFSHDKKYLGSISHDYMLKLWDM-DLLQSSE 300
           +GLI+L+ +LPNRIIQPIAEHS+YPVERLA SHD+K+LGSI+HD MLKLWDM DLLQ S 
Sbjct: 241 NGLINLLSILPNRIIQPIAEHSEYPVERLALSHDRKFLGSIAHDSMLKLWDMDDLLQDSG 300

Query: 301 NVSNGRAVVAAGASASDNL 319
           N  N R+  AA  + S+ +
Sbjct: 301 N--NLRSQAAAEDNDSNEM 317

The following BLAST results are available for this feature:
BLAST of Carg25781 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_022960342.15.9e-18199.69WD repeat-containing protein 55 [Cucurbita moschata][more]
XP_023515082.11.1e-17999.07WD repeat-containing protein 55 [Cucurbita pepo subsp. pepo][more]
XP_023004257.11.4e-17998.76WD repeat-containing protein 55 [Cucurbita maxima][more]
XP_022151710.11.2e-17093.50WD repeat-containing protein 55 [Momordica charantia][more]
XP_008464963.11.5e-14480.50PREDICTED: WD repeat-containing protein 55 [Cucumis melo] >XP_008464964.1 PREDIC... [more]
BLAST of Carg25781 vs. TAIR10
Match NameE-valueIdentityDescription
AT2G34260.11.3e-12169.41transducin family protein / WD-40 repeat family protein[more]
AT4G03020.11.3e-0427.35transducin family protein / WD-40 repeat family protein[more]
BLAST of Carg25781 vs. Swiss-Prot
Match NameE-valueIdentityDescription
sp|O80775|WDR55_ARATH2.3e-12069.41WD repeat-containing protein 55 OS=Arabidopsis thaliana OX=3702 GN=WDR55 PE=1 SV... [more]
sp|Q54SA5|WDR55_DICDI2.4e-5639.18WD repeat-containing protein 55 homolog OS=Dictyostelium discoideum OX=44689 GN=... [more]
sp|Q58DT8|WDR55_BOVIN1.7e-5439.72WD repeat-containing protein 55 OS=Bos taurus OX=9913 GN=WDR55 PE=2 SV=1[more]
sp|B2ZZS9|WDR55_ORYLA4.2e-5335.91WD repeat-containing protein 55 OS=Oryzias latipes OX=8090 GN=wdr55 PE=1 SV=1[more]
sp|A1L112|WDR55_RAT4.2e-5338.33WD repeat-containing protein 55 OS=Rattus norvegicus OX=10116 GN=Wdr55 PE=2 SV=1[more]
BLAST of Carg25781 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A1S3CPA6|A0A1S3CPA6_CUCME1.0e-14480.50WD repeat-containing protein 55 OS=Cucumis melo OX=3656 GN=LOC103502709 PE=4 SV=... [more]
tr|A0A2P6RDS7|A0A2P6RDS7_ROSCH1.1e-14079.29Putative transcription factor WD40-like family OS=Rosa chinensis OX=74649 GN=Rch... [more]
tr|A0A2I4E902|A0A2I4E902_9ROSI4.5e-13777.85WD repeat-containing protein 55 isoform X1 OS=Juglans regia OX=51240 GN=LOC10898... [more]
tr|A0A2P5EB29|A0A2P5EB29_9ROSA5.9e-13775.55WD repeat protein OS=Trema orientalis OX=63057 GN=TorRG33x02_215340 PE=4 SV=1[more]
tr|A0A2P5BML3|A0A2P5BML3_PARAD1.3e-13676.18WD repeat protein OS=Parasponia andersonii OX=3476 GN=PanWU01x14_226780 PE=4 SV=... [more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
Vocabulary: INTERPRO
TermDefinition
IPR036322WD40_repeat_dom_sf
IPR017986WD40_repeat_dom
IPR019775WD40_repeat_CS
IPR017422WDR55
IPR015943WD40/YVTN_repeat-like_dom_sf
IPR024977Apc4_WD40_dom
IPR001680WD40_repeat
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0005515 protein binding
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Carg25781-RACarg25781-RAmRNA


InterPro
Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 86..106
NoneNo IPR availablePANTHERPTHR45178FAMILY NOT NAMEDcoord: 1..316
IPR001680WD40 repeatSMARTSM00320WD40_4coord: 1..34
e-value: 380.0
score: 0.7
coord: 124..163
e-value: 1.2E-4
score: 31.5
coord: 166..205
e-value: 30.0
score: 7.7
coord: 251..291
e-value: 0.0026
score: 27.0
coord: 40..79
e-value: 0.16
score: 21.0
coord: 82..121
e-value: 0.0047
score: 26.1
IPR001680WD40 repeatPFAMPF00400WD40coord: 260..291
e-value: 0.029
score: 15.2
IPR001680WD40 repeatPROSITEPS50082WD_REPEATS_2coord: 47..88
score: 8.904
IPR024977Anaphase-promoting complex subunit 4, WD40 domainPFAMPF12894ANAPC4_WD40coord: 13..98
e-value: 1.7E-4
score: 21.7
IPR015943WD40/YVTN repeat-like-containing domain superfamilyGENE3DG3DSA:2.130.10.10coord: 2..136
e-value: 7.3E-25
score: 90.0
IPR015943WD40/YVTN repeat-like-containing domain superfamilyGENE3DG3DSA:2.130.10.10coord: 137..323
e-value: 7.1E-18
score: 66.4
IPR017422WD repeat protein 55PIRSFPIRSF038169WD_rpt_55coord: 1..317
e-value: 1.9E-113
score: 376.9
IPR019775WD40 repeat, conserved sitePROSITEPS00678WD_REPEATS_1coord: 108..122
IPR019775WD40 repeat, conserved sitePROSITEPS00678WD_REPEATS_1coord: 278..292
IPR017986WD40-repeat-containing domainPROSITEPS50294WD_REPEATS_REGIONcoord: 12..300
score: 20.883
IPR036322WD40-repeat-containing domain superfamilySUPERFAMILYSSF50978WD40 repeat-likecoord: 7..293