Carg25664 (gene) Silver-seed gourd | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Carg25664
Type	gene
Organism	Cucurbita argyrosperma (Silver-seed gourd)
Description	AP2-like ethylene-responsive transcription factor
Location	Cucurbita_argyrosperma_scaffold_291 : 12747 .. 15098 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

AAATGGGTTTCAAACTATTCCTAAAATTGGTTTAGATTTCAGAGTTTAAAGATTTGCTCTTACTTTATCGGGACCTGTTTCTCTCAGCTACTTCCTTTTCTGTTCTCTCTGATCAACTCAGCCATAGCCATAGAAGAAGCTTGAACAAGAACAGCCCACAAATTCAGAAAAGAAAAAGAAAAAAATCTCCTTTTTAATCTCTTTTCTAGAGATTTTCTTCACTGGGTTTTGTTTTTTGTGTTCAAAAAGTTGTGGGTTTGTGTTAATCTCGATAAAAATACTGTTTTTTGTTCTTATTTTTTCCAGTTCGATCTGTTTTGCTCTGTTTTTTTAAGATCGATCCAGAGGAATTACAGAGACGATGTTGAATCTTAACGATTTGATTATCAACTGCGATGAAACTTCGACGAATCGGACTGTAATGGAAGATTCTGAGACGTCGAATTCTTCTGTCGTGAATGCCGATGAGGTCTGCAACAGTAGAGATGAAGATTCCTCTGTTTTAATCTTCAATATTCTGAAAAGGGAAAATTCCGGCGGTGGTGGAGGTGGTGCGTCGCCGGAATTAGTGACTCAGGCGCTCTTTCCAGTGGCTGGAGGGTGGGGAGAAACTGGGTCTCCGGTTCCGAAGTCCCATTGGTTGAACCTGTCGTCGACCGGTGATTTTGTCGGCGAAGGCGTCGGTGGAGGAACTGCAGAGCTGAAAATTGTGCAGCAGAAACAGCAGCAGGTGAGGAAGAGCCGCCGTGGGCCGCGGTCCCGGAGTTCCCAGTACCGGGGAGTTACTTTTTACCGGCGCACCGGAAGATGGGAATCTCATATTTGGTAATAAAAAATTCTCAAATCTTGGTCTTTTTTTTTTTTTTTTTTTTTTTTTAATTCGTGGTTTCCAATCTGAGAATTTTTTATTTTATTTTATTTTTTCCTCAGGGATTGTGGGAAACAAGTTTATTTAGGTAAAGAAAAAAACCATAAAAAAAGTCCAATTTCTGTAAATAATTAATTTTTTTAAATTTCTTTGTTTGACAATCAGTTTGGGTTTGAATTTTCCCAGGTGGGTTCGACACTGCCCATGCTGCAGCAAGGTTTGTTTTGTTTTTGTTTTTGTTTTTTTTGAAGTAAATATCATATATTTTATATTAAAATTTATGGGTTTTGTTACAAGCAGGGCATATGATCGAGCAGCGATCAAATTTAGGGGAGTAAATGCAGATATAACGAGGTCGACAATGGTAGATGCAAACAATGGAGGTAAAAAAAAAATTAAGAAACTAAAAGATTTTCACCTTCCTTATTTATTTATTAAAATAAATTTACTTTTAATTCAGGCAATGGGCATAATCTTGATCTAAGCATTGGAGGAATTTTCAACTACCATTTAAGAAATTCTTCCCAAAACCTCAACATTCAAACACCAAAGGTACCTCTATATATATATATATATGGTAATTTTATTTATTTTTTCTTTAATTTAATATAATTTCACGTCGTGGGTATCTATCTCTTCGGAGCAAAACAAAATATATGTTAAAAAAAATCTCGAACGGAGCTCGTTCAAGAATGTCTGTACGAACAGTGATTAATTGTACTATAAATTTCGACGAACGTATATATCTTTATGGATAAGAAGGAACAAACTTCGAGGATATTATAGTAATATGGATTGATTGATGTCGTTTTCTTATCTTTTGTGTGTGTGGGCAGAAAGAAAACAATGGTGGTGGTGGGTATGGTGTGGGTGGACAACAGCCGCATATTCCTCCTATGTGGTCTGGTTTTTGCTCTGGTTTTTTAGCAGATAATCAGGTAATTTTTCTCCTCCCATTCTTTTGGAGCTCGTACTTAGTTTTTGTCTTTGTCTTTACAAATATACCCTTTTAGATTTTACGTTAGAACGTCGAGAAATGTATCTATCTATTTGTTTTGTTGGTTTACTCGTAGGTAGGTATCGACGTAAATAAGTGGTTGATACTACGCATAGTAAATTTGAGTTCGGTTTAGATATAGAACAGAAGTCGAGATTCCAAAATGAAATTATTTGGTTGTGAAAATGTTAGAAATTTAGGATTTTTGGTTAGAATTAATTTTGATTCTTTTGATATTTGTTCCAGACGAATAAAAATCAAACCAGATGACTTTGTTTGGTACGGGCGTCGTTGACGTTGTTTTACGTAAACAATACCCACTTGAACGAAACGAAAAAGAGAGGCTAAAAAGATTGTTTCTTTCTTATTTTTCGTGGTAGGAAAGAAGAGAGAGGAGAAGCTACCCGTCAAAGACCCTTACGAGCTCGGGATGGCCAATGGCAATGCCGATATCGATGCCGATGTCGGTTCAAGAAAATGGGAGTAA

mRNA sequence

AAATGGGTTTCAAACTATTCCTAAAATTGGTTTAGATTTCAGAGTTTAAAGATTTGCTCTTACTTTATCGGGACCTGTTTCTCTCAGCTACTTCCTTTTCTGTTCTCTCTGATCAACTCAGCCATAGCCATAGAAGAAGCTTGAACAAGAACAGCCCACAAATTCAGAAAAGAAAAAGAAAAAAATCTCCTTTTTAATCTCTTTTCTAGAGATTTTCTTCACTGGGTTTTGTTTTTTGTGTTCAAAAAGTTGTGGGTTTGTGTTAATCTCGATAAAAATACTGTTTTTTGTTCTTATTTTTTCCAGTTCGATCTGTTTTGCTCTGTTTTTTTAAGATCGATCCAGAGGAATTACAGAGACGATGTTGAATCTTAACGATTTGATTATCAACTGCGATGAAACTTCGACGAATCGGACTGTAATGGAAGATTCTGAGACGTCGAATTCTTCTGTCGTGAATGCCGATGAGGTCTGCAACAGTAGAGATGAAGATTCCTCTGTTTTAATCTTCAATATTCTGAAAAGGGAAAATTCCGGCGGTGGTGGAGGTGGTGCGTCGCCGGAATTAGTGACTCAGGCGCTCTTTCCAGTGGCTGGAGGGTGGGGAGAAACTGGGTCTCCGGTTCCGAAGTCCCATTGGTTGAACCTGTCGTCGACCGGTGATTTTGTCGGCGAAGGCGTCGGTGGAGGAACTGCAGAGCTGAAAATTGTGCAGCAGAAACAGCAGCAGGTGAGGAAGAGCCGCCGTGGGCCGCGGTCCCGGAGTTCCCAGTACCGGGGAGTTACTTTTTACCGGCGCACCGGAAGATGGGAATCTCATATTTGGGATTGTGGGAAACAAGTTTATTTAGGTGGGTTCGACACTGCCCATGCTGCAGCAAGGGCATATGATCGAGCAGCGATCAAATTTAGGGGAGTAAATGCAGATATAACGAGGTCGACAATGGTAGATGCAAACAATGGAGGCAATGGGCATAATCTTGATCTAAGCATTGGAGGAATTTTCAACTACCATTTAAGAAATTCTTCCCAAAACCTCAACATTCAAACACCAAAGAAAGAAAACAATGGTGGTGGTGGGTATGGTGTGGGTGGACAACAGCCGCATATTCCTCCTATGTGGTCTGGAAAGAAGAGAGAGGAGAAGCTACCCGTCAAAGACCCTTACGAGCTCGGGATGGCCAATGGCAATGCCGATATCGATGCCGATGTCGGTTCAAGAAAATGGGAGTAA

Coding sequence (CDS)

ATGTTGAATCTTAACGATTTGATTATCAACTGCGATGAAACTTCGACGAATCGGACTGTAATGGAAGATTCTGAGACGTCGAATTCTTCTGTCGTGAATGCCGATGAGGTCTGCAACAGTAGAGATGAAGATTCCTCTGTTTTAATCTTCAATATTCTGAAAAGGGAAAATTCCGGCGGTGGTGGAGGTGGTGCGTCGCCGGAATTAGTGACTCAGGCGCTCTTTCCAGTGGCTGGAGGGTGGGGAGAAACTGGGTCTCCGGTTCCGAAGTCCCATTGGTTGAACCTGTCGTCGACCGGTGATTTTGTCGGCGAAGGCGTCGGTGGAGGAACTGCAGAGCTGAAAATTGTGCAGCAGAAACAGCAGCAGGTGAGGAAGAGCCGCCGTGGGCCGCGGTCCCGGAGTTCCCAGTACCGGGGAGTTACTTTTTACCGGCGCACCGGAAGATGGGAATCTCATATTTGGGATTGTGGGAAACAAGTTTATTTAGGTGGGTTCGACACTGCCCATGCTGCAGCAAGGGCATATGATCGAGCAGCGATCAAATTTAGGGGAGTAAATGCAGATATAACGAGGTCGACAATGGTAGATGCAAACAATGGAGGCAATGGGCATAATCTTGATCTAAGCATTGGAGGAATTTTCAACTACCATTTAAGAAATTCTTCCCAAAACCTCAACATTCAAACACCAAAGAAAGAAAACAATGGTGGTGGTGGGTATGGTGTGGGTGGACAACAGCCGCATATTCCTCCTATGTGGTCTGGAAAGAAGAGAGAGGAGAAGCTACCCGTCAAAGACCCTTACGAGCTCGGGATGGCCAATGGCAATGCCGATATCGATGCCGATGTCGGTTCAAGAAAATGGGAGTAA

Protein sequence

MLNLNDLIINCDETSTNRTVMEDSETSNSSVVNADEVCNSRDEDSSVLIFNILKRENSGGGGGGASPELVTQALFPVAGGWGETGSPVPKSHWLNLSSTGDFVGEGVGGGTAELKIVQQKQQQVRKSRRGPRSRSSQYRGVTFYRRTGRWESHIWDCGKQVYLGGFDTAHAAARAYDRAAIKFRGVNADITRSTMVDANNGGNGHNLDLSIGGIFNYHLRNSSQNLNIQTPKKENNGGGGYGVGGQQPHIPPMWSGKKREEKLPVKDPYELGMANGNADIDADVGSRKWE

Homology

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BLAST of Carg25664 vs. NCBI nr
Match: XP_022942115.1 (ethylene-responsive transcription factor RAP2-7-like isoform X2 [Cucurbita moschata])

HSP 1 Score: 488.8 bits (1257), Expect = 1.3e-134
Identity = 281/364 (77.20%), Postives = 282/364 (77.47%), Query Frame = 0


Query: 1   MLNLNDLIINCDETSTNRTVMEDSETSNSSVVNADEVCNSRDEDSSVLIFNXXXXXXXXX 60
           MLNLNDLIINCDETSTNRTVMEDSETSNSSVVNADEVCNSRDEDSSVLIF XXXXXXXXX
Sbjct: 1   MLNLNDLIINCDETSTNRTVMEDSETSNSSVVNADEVCNSRDEDSSVLIFXXXXXXXXXX 60

Query: 61  XXXXXXPELVTQALFPVAGGWGETGSPVPKSHWLNLSSTGDFVGEGVGGGTAELKIVQQK 120
           XXXXXX ELVTQALFPVAGGWGETGSPVPKSHWLNLSSTGDF GEGVGGGTAELKIVQQK
Sbjct: 61  XXXXXXXELVTQALFPVAGGWGETGSPVPKSHWLNLSSTGDFGGEGVGGGTAELKIVQQK 120

Query: 121 QQQVRKSRRGPRSRSSQYRGVTFYRRTGRWESHIWDCGKQVYLGGFDTAHAAARAYDRAA 180
           QQQVRKSRRGPRSRSSQYRGVTFYRRTGRWESHIWDCGKQVYLGGFDTAHAAARAYDRAA
Sbjct: 121 QQQVRKSRRGPRSRSSQYRGVTFYRRTGRWESHIWDCGKQVYLGGFDTAHAAARAYDRAA 180

Query: 181 IKFRGVNADIT------------------------------------------------- 240
           IKFRGVNADI                                                  
Sbjct: 181 IKFRGVNADINFNISDYDEDMKQLKNLSKEEFVHVLRRQSTGFSRGGSKLRGLSLQKYGR 240

Query: 241 ----------------RSTMVDANNGGNGHNLDLSIGGIFNYHLRNSSQNLNIQTPKKEX 291
                           RSTMVDANNGGNGHNLDLSIGGIFNYHLRNSSQNLNIQTPKKE 
Sbjct: 241 WETQTSPLMTKNEIEERSTMVDANNGGNGHNLDLSIGGIFNYHLRNSSQNLNIQTPKKEN 300

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BLAST of Carg25664 vs. NCBI nr
Match: XP_022991369.1 (ethylene-responsive transcription factor RAP2-7-like isoform X2 [Cucurbita maxima])

HSP 1 Score: 477.6 bits (1228), Expect = 2.9e-131
Identity = 264/365 (72.33%), Postives = 267/365 (73.15%), Query Frame = 0


Query: 1   MLNLNDLIINCDETSTNRTVMEDSETSNSSVVNADEVCNSRDEDSSVLIFNXXXXXXXXX 60
           MLNLNDLIINCDETSTNRTVMEDSETSNSSVVNADEVCNS+DEDSSVLIFN         
Sbjct: 1   MLNLNDLIINCDETSTNRTVMEDSETSNSSVVNADEVCNSKDEDSSVLIFN---ILKREN 60

Query: 61  XXXXXXPELVTQALFPVAGGWGETGSPVPKSHWLNLSSTGDFVGEGVGGGTAELKIVQQK 120
                 PELVTQALFPVAGGWGETGSPVPKSHWLNLSSTGDF  EGVGGGTAELKIVQQK
Sbjct: 61  SGGGASPELVTQALFPVAGGWGETGSPVPKSHWLNLSSTGDFGREGVGGGTAELKIVQQK 120

Query: 121 QQQVRKSRRGPRSRSSQYRGVTFYRRTGRWESHIWDCGKQVYLGGFDTAHAAARAYDRAA 180
           QQQVRKSRRGPRSRSSQYRGVTFYRRTGRWESHIWDCGKQVYLGGFDTAHAAARAYDRAA
Sbjct: 121 QQQVRKSRRGPRSRSSQYRGVTFYRRTGRWESHIWDCGKQVYLGGFDTAHAAARAYDRAA 180

Query: 181 IKFRGVNADIT------------------------------------------------- 240
           IKFRGVNADI                                                  
Sbjct: 181 IKFRGVNADINFNISDYDEDMKQLKNLSKEEFVHVLRRQSTGFSRGGSKLRGLSLQKYGR 240

Query: 241 ----------------RSTMVDANNGGNGHNLDLSIGGIFNYHLRNSSQNLNIQTPKKEX 291
                           RSTMVDANNGGNGHNLDLSIGGIFNYHLRNSSQN+NIQTPKKE 
Sbjct: 241 WETQTSPIMAKNEIEQRSTMVDANNGGNGHNLDLSIGGIFNYHLRNSSQNINIQTPKKEN 300

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BLAST of Carg25664 vs. NCBI nr
Match: XP_023517304.1 (ethylene-responsive transcription factor RAP2-7-like isoform X2 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 473.0 bits (1216), Expect = 7.2e-130
Identity = 274/365 (75.07%), Postives = 275/365 (75.34%), Query Frame = 0


Query: 1   MLNLNDLIINCDETSTNRTVMEDSETSNSSVVNADEVCNSRDEDSSVLIFNXXXXXXXXX 60
           MLNLNDLIINCDETST RTVMEDSETSNSSVVNADEVCNSRDEDSSV    XXXXXXXXX
Sbjct: 1   MLNLNDLIINCDETSTKRTVMEDSETSNSSVVNADEVCNSRDEDSSVXXXXXXXXXXXXX 60

Query: 61  XXXXXXPELVTQALFPVAGGWGETGSPVPKSHWLNLSSTGDFVGEGVGGGTAELKIVQQK 120
           XXXXXXPELVTQ LFPVAGGWGETGSPVPKSHWLNLSSTGDF GEGVGGGTAELKIVQQK
Sbjct: 61  XXXXXXPELVTQTLFPVAGGWGETGSPVPKSHWLNLSSTGDFGGEGVGGGTAELKIVQQK 120

Query: 121 QQQVRKSRRGPRSRSSQYRGVTFYRRTGRWESHIWDCGKQVYLGGFDTAHAAARAYDRAA 180
           QQQVRKSRRGPRSRSSQYRGVTFYRRTGRWESHIWDCGKQVYLGGFDTAHAAARAYDRAA
Sbjct: 121 QQQVRKSRRGPRSRSSQYRGVTFYRRTGRWESHIWDCGKQVYLGGFDTAHAAARAYDRAA 180

Query: 181 IKFRGVNADIT------------------------------------------------- 240
           IKFRGVNADI                                                  
Sbjct: 181 IKFRGVNADINFNISDYDEDMKQLKNLSKEEFVHVLRRQSTGFSRGGSKLRGLSLQKYGR 240

Query: 241 ----------------RSTMVDANNGGNGHNLDLSIGGIFNYHLRNSSQNLNIQTPKKEX 291
                           RSTMVDANNGGNGHNLDLSIGGIFNYHLRNSSQNLNIQTPKKE 
Sbjct: 241 WETQTSPIMTKNEIEERSTMVDANNGGNGHNLDLSIGGIFNYHLRNSSQNLNIQTPKKES 300

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BLAST of Carg25664 vs. NCBI nr
Match: XP_022942114.1 (ethylene-responsive transcription factor RAP2-7-like isoform X1 [Cucurbita moschata])

HSP 1 Score: 427.6 bits (1098), Expect = 3.5e-116
Identity = 248/321 (77.26%), Postives = 248/321 (77.26%), Query Frame = 0


Query: 1   MLNLNDLIINCDETSTNRTVMEDSETSNSSVVNADEVCNSRDEDSSVLIFNXXXXXXXXX 60
           MLNLNDLIINCDETSTNRTVMEDSETSNSSVVNADEVCNSRDEDSSVLIF XXXXXXXXX
Sbjct: 1   MLNLNDLIINCDETSTNRTVMEDSETSNSSVVNADEVCNSRDEDSSVLIFXXXXXXXXXX 60

Query: 61  XXXXXXPELVTQALFPVAGGWGETGSPVPKSHWLNLSSTGDFVGEGVGGGTAELKIVQQK 120
           XXXXXX ELVTQALFPVAGGWGETGSPVPKSHWLNLSSTGDF GEGVGGGTAELKIVQQK
Sbjct: 61  XXXXXXXELVTQALFPVAGGWGETGSPVPKSHWLNLSSTGDFGGEGVGGGTAELKIVQQK 120

Query: 121 QQQVRKSRRGPRSRSSQYRGVTFYRRTGRWESHIWDCGKQVYLGGFDTAHAAARAYDRAA 180
           QQQVRKSRRGPRSRSSQYRGVTFYRRTGRWESHIWDCGKQVYLGGFDTAHAAARAYDRAA
Sbjct: 121 QQQVRKSRRGPRSRSSQYRGVTFYRRTGRWESHIWDCGKQVYLGGFDTAHAAARAYDRAA 180

Query: 181 IKFRGVNADIT------------------------------------------------- 240
           IKFRGVNADI                                                  
Sbjct: 181 IKFRGVNADINFNISDYDEDMKQLKNLSKEEFVHVLRRQSTGFSRGGSKLRGLSLQKYGR 240

Query: 241 ----------------RSTMVDANNGGNGHNLDLSIGGIFNYHLRNSSQNLNIQTPKKEX 257
                           RSTMVDANNGGNGHNLDLSIGGIFNYHLRNSSQNLNIQTPKKE 
Sbjct: 241 WETQTSPLMTKNEIEERSTMVDANNGGNGHNLDLSIGGIFNYHLRNSSQNLNIQTPKKEN 300

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BLAST of Carg25664 vs. NCBI nr
Match: XP_022942116.1 (ethylene-responsive transcription factor RAP2-7-like isoform X3 [Cucurbita moschata])

HSP 1 Score: 427.6 bits (1098), Expect = 3.5e-116
Identity = 248/321 (77.26%), Postives = 248/321 (77.26%), Query Frame = 0


Query: 1   MLNLNDLIINCDETSTNRTVMEDSETSNSSVVNADEVCNSRDEDSSVLIFNXXXXXXXXX 60
           MLNLNDLIINCDETSTNRTVMEDSETSNSSVVNADEVCNSRDEDSSVLIF XXXXXXXXX
Sbjct: 1   MLNLNDLIINCDETSTNRTVMEDSETSNSSVVNADEVCNSRDEDSSVLIFXXXXXXXXXX 60

Query: 61  XXXXXXPELVTQALFPVAGGWGETGSPVPKSHWLNLSSTGDFVGEGVGGGTAELKIVQQK 120
           XXXXXX ELVTQALFPVAGGWGETGSPVPKSHWLNLSSTGDF GEGVGGGTAELKIVQQK
Sbjct: 61  XXXXXXXELVTQALFPVAGGWGETGSPVPKSHWLNLSSTGDFGGEGVGGGTAELKIVQQK 120

Query: 121 QQQVRKSRRGPRSRSSQYRGVTFYRRTGRWESHIWDCGKQVYLGGFDTAHAAARAYDRAA 180
           QQQVRKSRRGPRSRSSQYRGVTFYRRTGRWESHIWDCGKQVYLGGFDTAHAAARAYDRAA
Sbjct: 121 QQQVRKSRRGPRSRSSQYRGVTFYRRTGRWESHIWDCGKQVYLGGFDTAHAAARAYDRAA 180

Query: 181 IKFRGVNADIT------------------------------------------------- 240
           IKFRGVNADI                                                  
Sbjct: 181 IKFRGVNADINFNISDYDEDMKQLKNLSKEEFVHVLRRQSTGFSRGGSKLRGLSLQKYGR 240

Query: 241 ----------------RSTMVDANNGGNGHNLDLSIGGIFNYHLRNSSQNLNIQTPKKEX 257
                           RSTMVDANNGGNGHNLDLSIGGIFNYHLRNSSQNLNIQTPKKE 
Sbjct: 241 WETQTSPLMTKNEIEERSTMVDANNGGNGHNLDLSIGGIFNYHLRNSSQNLNIQTPKKEN 300

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BLAST of Carg25664 vs. TAIR10
Match: AT5G60120.2 (target of early activation tagged (EAT) 2)

HSP 1 Score: 158.3 bits (399), Expect = 7.1e-39
Identity = 117/215 (54.42%), Postives = 136/215 (63.26%), Query Frame = 0


Query: 1   MLNLNDLIINCDETSTNR----------TVMEDSETSNSSVVNA---------DEVCNSR 60
           ML+LN  + + + T   R            M++S TSNSSVVNA         DE+C++R
Sbjct: 1   MLDLNLDVDSTESTQNERDSITVKGVSLNQMDESVTSNSSVVNAEASSCIDGEDELCSTR 60

Query: 61  DEDSSVLIFNXXXXXXXXXXXXXXXPELVTQALFPVAGGWGETGSPVPKSH------WLN 120
                  I  XXXXXXXXXXXXXXX     +  FPVA G     S    S       +  
Sbjct: 61  TVKFQFEILKXXXXXXXXXXXXXXXXXXXXE-FFPVAKGMNFMDSSAQSSRSTVDISFQR 120

Query: 121 LSSTGDFVGEGVGGGTAELKIVQQKQQQVRKSRRGPRSRSSQYRGVTFYRRTGRWESHIW 180
               GDF+G G GGG A  +++Q   Q V+KSRRGPRS+SSQYRGVTFYRRTGRWESHIW
Sbjct: 121 GKQGGDFIGSGSGGGDAS-RVMQPPSQPVKKSRRGPRSKSSQYRGVTFYRRTGRWESHIW 180

Query: 181 DCGKQVYLGGFDTAHAAARAYDRAAIKFRGVNADI 191
           DCGKQVYLGGFDTAHAAARAYDRAA+KFRG+ ADI
Sbjct: 181 DCGKQVYLGGFDTAHAAARAYDRAAVKFRGLEADI 213

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BLAST of Carg25664 vs. TAIR10
Match: AT4G36920.1 (Integrase-type DNA-binding superfamily protein)

HSP 1 Score: 151.4 bits (381), Expect = 8.7e-37
Identity = 79/125 (63.20%), Postives = 87/125 (69.60%), Query Frame = 0


Query: 69  LVTQALFP-VAGGWGETGSPVPKSHWLNLS--STGDFVGEGVGGGTAELKIVQQKQQQVR 128
           LVT   FP +    G   S  P++HW  +    +    G   G  T     V +  Q ++
Sbjct: 60  LVTHQFFPEMDSNGGGVASGFPRAHWFGVKFCQSDLATGSSAGKATNVAAAVVEPAQPLK 119

Query: 129 KSRRGPRSRSSQYRGVTFYRRTGRWESHIWDCGKQVYLGGFDTAHAAARAYDRAAIKFRG 188
           KSRRGPRSRSSQYRGVTFYRRTGRWESHIWDCGKQVYLGGFDTAHAAARAYDRAAIKFRG
Sbjct: 120 KSRRGPRSRSSQYRGVTFYRRTGRWESHIWDCGKQVYLGGFDTAHAAARAYDRAAIKFRG 179

Query: 189 VNADI 191
           V ADI
Sbjct: 180 VEADI 184

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BLAST of Carg25664 vs. TAIR10
Match: AT2G28550.3 (related to AP2.7)

HSP 1 Score: 148.3 bits (373), Expect = 7.4e-36
Identity = 93/183 (50.82%), Postives = 110/183 (60.11%), Query Frame = 0


Query: 12  DETSTNRTVMEDSETSNSSVVNADEVCNSRDEDSSVLIFNXXXXXXXXXXXXXXXPEL-V 71
           D ++ NR  +E+S TS SSV+NAD   +S    +  L F+                   V
Sbjct: 28  DNSAGNR--VEESGTSTSSVINADGDEDSCSTRAFTLSFDILKVGSSSGGDESPAASASV 87

Query: 72  TQALFPVAGGWG---ETGSPVPKSHWLNLSSTGDFVGEGVGGGTAELKIVQQKQQQVRKS 131
           T+  FPV+G  G   +        +W++LS   D +G+G                   KS
Sbjct: 88  TKEFFPVSGDCGHLRDVEGSSSSRNWIDLSF--DRIGDGETKLVTXXXXXXXXXXXXXKS 147

Query: 132 RRGPRSRSSQYRGVTFYRRTGRWESHIWDCGKQVYLGGFDTAHAAARAYDRAAIKFRGVN 191
           RRGPRSRSSQYRGVTFYRRTGRWESHIWDCGKQVYLGGFDTAHAAARAYDRAAIKFRGV+
Sbjct: 148 RRGPRSRSSQYRGVTFYRRTGRWESHIWDCGKQVYLGGFDTAHAAARAYDRAAIKFRGVD 206

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BLAST of Carg25664 vs. TAIR10
Match: AT3G54990.1 (Integrase-type DNA-binding superfamily protein)

HSP 1 Score: 144.8 bits (364), Expect = 8.2e-35
Identity = 79/121 (65.29%), Postives = 86/121 (71.07%), Query Frame = 0


Query: 71  TQALFP-VAGGWGETGSPVPKSHWLNLSSTGDFVGEGVGGGTAELKIVQQKQQQVRKSRR 130
           T  LFP VA         V  SHWLNLSS                 + +  Q+ V+KSRR
Sbjct: 72  TGDLFPVVADARRNIEFSVEDSHWLNLSS-----------------LQRNTQKMVKKSRR 131

Query: 131 GPRSRSSQYRGVTFYRRTGRWESHIWDCGKQVYLGGFDTAHAAARAYDRAAIKFRGVNAD 190
           GPRSRSSQYRGVTFYRRTGRWESHIWDCGKQVYLGGFDTA+AAARAYDRAAIKFRG++AD
Sbjct: 132 GPRSRSSQYRGVTFYRRTGRWESHIWDCGKQVYLGGFDTAYAAARAYDRAAIKFRGLDAD 175

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BLAST of Carg25664 vs. TAIR10
Match: AT5G67180.1 (target of early activation tagged (EAT) 3)

HSP 1 Score: 138.3 bits (347), Expect = 7.7e-33
Identity = 74/117 (63.25%), Postives = 82/117 (70.09%), Query Frame = 0


Query: 74  LFPVAGGWGETGSPVPKSHWLNLSSTGDFVGEGVGGGTAELKIVQQKQQQVRKSRRGPRS 133
           + PV   +    S  P   W   +S G    +  G G  E     +    ++KSRRGPRS
Sbjct: 38  VLPVTRNFFPAQSMEPGVRWSGFNSVGK--SDPSGSGRPE---EPEISPPIKKSRRGPRS 97

Query: 134 RSSQYRGVTFYRRTGRWESHIWDCGKQVYLGGFDTAHAAARAYDRAAIKFRGVNADI 191
           RSSQYRGVTFYRRTGRWESHIWDCGKQVYLGGFDTAHAAARAYDRAAIKFRGV+ADI
Sbjct: 98  RSSQYRGVTFYRRTGRWESHIWDCGKQVYLGGFDTAHAAARAYDRAAIKFRGVDADI 149

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BLAST of Carg25664 vs. Swiss-Prot
Match: sp|Q9LVG2|TOE2_ARATH (AP2-like ethylene-responsive transcription factor TOE2 OS=Arabidopsis thaliana OX=3702 GN=TOE2 PE=1 SV=1)

HSP 1 Score: 158.3 bits (399), Expect = 1.3e-37
Identity = 117/215 (54.42%), Postives = 136/215 (63.26%), Query Frame = 0


Query: 1   MLNLNDLIINCDETSTNR----------TVMEDSETSNSSVVNA---------DEVCNSR 60
           ML+LN  + + + T   R            M++S TSNSSVVNA         DE+C++R
Sbjct: 1   MLDLNLDVDSTESTQNERDSITVKGVSLNQMDESVTSNSSVVNAEASSCIDGEDELCSTR 60

Query: 61  DEDSSVLIFNXXXXXXXXXXXXXXXPELVTQALFPVAGGWGETGSPVPKSH------WLN 120
                  I  XXXXXXXXXXXXXXX     +  FPVA G     S    S       +  
Sbjct: 61  TVKFQFEILKXXXXXXXXXXXXXXXXXXXXE-FFPVAKGMNFMDSSAQSSRSTVDISFQR 120

Query: 121 LSSTGDFVGEGVGGGTAELKIVQQKQQQVRKSRRGPRSRSSQYRGVTFYRRTGRWESHIW 180
               GDF+G G GGG A  +++Q   Q V+KSRRGPRS+SSQYRGVTFYRRTGRWESHIW
Sbjct: 121 GKQGGDFIGSGSGGGDAS-RVMQPPSQPVKKSRRGPRSKSSQYRGVTFYRRTGRWESHIW 180

Query: 181 DCGKQVYLGGFDTAHAAARAYDRAAIKFRGVNADI 191
           DCGKQVYLGGFDTAHAAARAYDRAA+KFRG+ ADI
Sbjct: 181 DCGKQVYLGGFDTAHAAARAYDRAAVKFRGLEADI 213

[Close]

BLAST of Carg25664 vs. Swiss-Prot
Match: sp|P47927|AP2_ARATH (Floral homeotic protein APETALA 2 OS=Arabidopsis thaliana OX=3702 GN=AP2 PE=1 SV=1)

HSP 1 Score: 151.4 bits (381), Expect = 1.6e-35
Identity = 79/125 (63.20%), Postives = 87/125 (69.60%), Query Frame = 0


Query: 69  LVTQALFP-VAGGWGETGSPVPKSHWLNLS--STGDFVGEGVGGGTAELKIVQQKQQQVR 128
           LVT   FP +    G   S  P++HW  +    +    G   G  T     V +  Q ++
Sbjct: 60  LVTHQFFPEMDSNGGGVASGFPRAHWFGVKFCQSDLATGSSAGKATNVAAAVVEPAQPLK 119

Query: 129 KSRRGPRSRSSQYRGVTFYRRTGRWESHIWDCGKQVYLGGFDTAHAAARAYDRAAIKFRG 188
           KSRRGPRSRSSQYRGVTFYRRTGRWESHIWDCGKQVYLGGFDTAHAAARAYDRAAIKFRG
Sbjct: 120 KSRRGPRSRSSQYRGVTFYRRTGRWESHIWDCGKQVYLGGFDTAHAAARAYDRAAIKFRG 179

Query: 189 VNADI 191
           V ADI
Sbjct: 180 VEADI 184

[Close]

BLAST of Carg25664 vs. Swiss-Prot
Match: sp|Q9SK03|RAP27_ARATH (Ethylene-responsive transcription factor RAP2-7 OS=Arabidopsis thaliana OX=3702 GN=RAP2-7 PE=2 SV=2)

HSP 1 Score: 148.3 bits (373), Expect = 1.3e-34
Identity = 93/183 (50.82%), Postives = 110/183 (60.11%), Query Frame = 0


Query: 12  DETSTNRTVMEDSETSNSSVVNADEVCNSRDEDSSVLIFNXXXXXXXXXXXXXXXPEL-V 71
           D ++ NR  +E+S TS SSV+NAD   +S    +  L F+                   V
Sbjct: 28  DNSAGNR--VEESGTSTSSVINADGDEDSCSTRAFTLSFDILKVGSSSGGDESPAASASV 87

Query: 72  TQALFPVAGGWG---ETGSPVPKSHWLNLSSTGDFVGEGVGGGTAELKIVQQKQQQVRKS 131
           T+  FPV+G  G   +        +W++LS   D +G+G                   KS
Sbjct: 88  TKEFFPVSGDCGHLRDVEGSSSSRNWIDLSF--DRIGDGETKLVTXXXXXXXXXXXXXKS 147

Query: 132 RRGPRSRSSQYRGVTFYRRTGRWESHIWDCGKQVYLGGFDTAHAAARAYDRAAIKFRGVN 191
           RRGPRSRSSQYRGVTFYRRTGRWESHIWDCGKQVYLGGFDTAHAAARAYDRAAIKFRGV+
Sbjct: 148 RRGPRSRSSQYRGVTFYRRTGRWESHIWDCGKQVYLGGFDTAHAAARAYDRAAIKFRGVD 206

[Close]

BLAST of Carg25664 vs. Swiss-Prot
Match: sp|Q6PV68|SMZ_ARATH (AP2-like ethylene-responsive transcription factor SMZ OS=Arabidopsis thaliana OX=3702 GN=SMZ PE=2 SV=1)

HSP 1 Score: 144.8 bits (364), Expect = 1.5e-33
Identity = 79/121 (65.29%), Postives = 86/121 (71.07%), Query Frame = 0


Query: 71  TQALFP-VAGGWGETGSPVPKSHWLNLSSTGDFVGEGVGGGTAELKIVQQKQQQVRKSRR 130
           T  LFP VA         V  SHWLNLSS                 + +  Q+ V+KSRR
Sbjct: 72  TGDLFPVVADARRNIEFSVEDSHWLNLSS-----------------LQRNTQKMVKKSRR 131

Query: 131 GPRSRSSQYRGVTFYRRTGRWESHIWDCGKQVYLGGFDTAHAAARAYDRAAIKFRGVNAD 190
           GPRSRSSQYRGVTFYRRTGRWESHIWDCGKQVYLGGFDTA+AAARAYDRAAIKFRG++AD
Sbjct: 132 GPRSRSSQYRGVTFYRRTGRWESHIWDCGKQVYLGGFDTAYAAARAYDRAAIKFRGLDAD 175

[Close]

BLAST of Carg25664 vs. Swiss-Prot
Match: sp|Q9FH95|TOE3_ARATH (AP2-like ethylene-responsive transcription factor TOE3 OS=Arabidopsis thaliana OX=3702 GN=TOE3 PE=1 SV=1)

HSP 1 Score: 138.3 bits (347), Expect = 1.4e-31
Identity = 74/117 (63.25%), Postives = 82/117 (70.09%), Query Frame = 0


Query: 74  LFPVAGGWGETGSPVPKSHWLNLSSTGDFVGEGVGGGTAELKIVQQKQQQVRKSRRGPRS 133
           + PV   +    S  P   W   +S G    +  G G  E     +    ++KSRRGPRS
Sbjct: 38  VLPVTRNFFPAQSMEPGVRWSGFNSVGK--SDPSGSGRPE---EPEISPPIKKSRRGPRS 97

Query: 134 RSSQYRGVTFYRRTGRWESHIWDCGKQVYLGGFDTAHAAARAYDRAAIKFRGVNADI 191
           RSSQYRGVTFYRRTGRWESHIWDCGKQVYLGGFDTAHAAARAYDRAAIKFRGV+ADI
Sbjct: 98  RSSQYRGVTFYRRTGRWESHIWDCGKQVYLGGFDTAHAAARAYDRAAIKFRGVDADI 149

[Close]

BLAST of Carg25664 vs. TrEMBL
Match: tr|A0A1S3BEB5|A0A1S3BEB5_CUCME (ethylene-responsive transcription factor RAP2-7 OS=Cucumis melo OX=3656 GN=LOC103488740 PE=4 SV=1)

HSP 1 Score: 224.2 bits (570), Expect = 3.9e-55
Identity = 164/329 (49.85%), Postives = 174/329 (52.89%), Query Frame = 0


Query: 1   MLNLNDLIINCDETSTNRTVMEDSE--TSNSSVVNADEVCNSRDEDSSVLIFNXXXXXXX 60
           ML+LND I N DET+ +R VMEDSE                            XXXXXXX
Sbjct: 2   MLDLNDSITNRDETAASRIVMEDSEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 61

Query: 61  XXXXXXXXPELVTQALFPVAGGWGETGSPVPKSHWLNLSSTGDFVGEGVGGGTAELKIVQ 120
           XXXXXXXX   VTQ LFPV GGWG++GSPVP++HWLNLSST                   
Sbjct: 62  XXXXXXXXXXXVTQTLFPVVGGWGDSGSPVPRTHWLNLSST---XXXXXXXXXXXXXXXX 121

Query: 121 QKQQQVRKSRRGPRSRSSQYRGVTFYRRTGRWESHIWDCGKQVYLGGFDTAHAAARAYDR 180
                    RRGPRSRSSQYRGVTFYRRTGRWESHIWDCGKQVYLGGFDTAHAAARAYDR
Sbjct: 122 XXXXXXXXXRRGPRSRSSQYRGVTFYRRTGRWESHIWDCGKQVYLGGFDTAHAAARAYDR 181

Query: 181 AAIKFRGVNADITRS--------------------------------------------- 240
           AAIKFRGV+ADI  S                                             
Sbjct: 182 AAIKFRGVDADINFSISDYDEDMKQMKNLSKEEFVHVLRRQSTGFSRGGSKLRGLSLQKY 241

Query: 241 ------------------------TMVDANNGGNGHNLDLSIGGIFNYHLRNSSQNLNIQ 256
                                   TMVD+NNG NGHNLDLSIGGIFNYH  NS Q LNI+
Sbjct: 242 GRWENQMSQIIGKNGIEQRSYKGDTMVDSNNGANGHNLDLSIGGIFNYHFTNSPQKLNIE 301

[Close]

BLAST of Carg25664 vs. TrEMBL
Match: tr|A0A0A0KLE4|A0A0A0KLE4_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G175970 PE=4 SV=1)

HSP 1 Score: 223.4 bits (568), Expect = 6.6e-55
Identity = 168/330 (50.91%), Postives = 178/330 (53.94%), Query Frame = 0


Query: 1   MLNLNDLIINCDETSTNRTVMEDSETSNS--SVVNADEVCNSRDEDSSVLIFNXXXXXXX 60
           ML+LND I N DET T+R VMEDSETSNS                        XXXXXXX
Sbjct: 2   MLDLNDSITNRDETPTSRIVMEDSETSNSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 61

Query: 61  XXXXXXXXPELVTQALFPVAGGWGETG-SPVPKSHWLNLSSTGDFVGEGVGGGTAELKIV 120
           XXXXXXXX    TQ LFPV GGWG++G SPVP++HWLNLSS                   
Sbjct: 62  XXXXXXXXXXXXTQTLFPVVGGWGDSGSSPVPRTHWLNLSS---XXXXXXXXXXXXXXXX 121

Query: 121 QQKQQQVRKSRRGPRSRSSQYRGVTFYRRTGRWESHIWDCGKQVYLGGFDTAHAAARAYD 180
                     RRGPRSRSSQYRGVTFYRRTGRWESHIWDCGKQVYLGGFDTAHAAARAYD
Sbjct: 122 XXXXXXXXXXRRGPRSRSSQYRGVTFYRRTGRWESHIWDCGKQVYLGGFDTAHAAARAYD 181

Query: 181 RAAIKFRGVNADIT---------------------------RST---------------- 240
           RAAIKFRGV+ADI                            +ST                
Sbjct: 182 RAAIKFRGVDADINFNINDYDEDMKQMKNLSKEEFVHVLRRQSTGFSRGGSKLRGLSLQK 241

Query: 241 --------------------------MVDANNGGNGHNLDLSIGGIFNYHLRNSSQNLNI 256
                                     MVD+NNG NGHNLDLSIGGIFNYHL NS Q LNI
Sbjct: 242 YGRWENQMSQIIGKNGIEQRSCKGDAMVDSNNGANGHNLDLSIGGIFNYHLTNSPQKLNI 301

[Close]

BLAST of Carg25664 vs. TrEMBL
Match: tr|A0A2I4FAW9|A0A2I4FAW9_9ROSI (AP2-like ethylene-responsive transcription factor TOE3 isoform X1 OS=Juglans regia OX=51240 GN=LOC108997119 PE=4 SV=1)

HSP 1 Score: 197.6 bits (501), Expect = 3.9e-47
Identity = 120/186 (64.52%), Postives = 129/186 (69.35%), Query Frame = 0


Query: 21  MEDSETSNSSVVNADEVCNS-RDEDSS----VLIF------NXXXXXXXXXXXXXXXPEL 80
           MEDS TS SSVVNA+E  N+ RDEDSS      IF      N               PEL
Sbjct: 36  MEDSGTSTSSVVNAEEAPNNVRDEDSSNNSPEFIFDILRKENHGIRSGKEFKDETPAPEL 95

Query: 81  VTQALFPV----AGGWGETGSPV-PKSHWLNLSSTGDFVGEGVGGGTAELKIVQQKQQQV 140
           VT++LFPV     GG  E GS    +  WLNLS   D       GG AEL+I+QQKQQQV
Sbjct: 96  VTRSLFPVTGETGGGESEFGSGFSSRPQWLNLSFAHD------SGGQAELRILQQKQQQV 155

Query: 141 RKSRRGPRSRSSQYRGVTFYRRTGRWESHIWDCGKQVYLGGFDTAHAAARAYDRAAIKFR 191
           RKSRRGPRSRSSQYRGVTFYRRTGRWESHIWDCGKQVYLGGFDTAHAAARAYDRAAIKFR
Sbjct: 156 RKSRRGPRSRSSQYRGVTFYRRTGRWESHIWDCGKQVYLGGFDTAHAAARAYDRAAIKFR 215

[Close]

BLAST of Carg25664 vs. TrEMBL
Match: tr|A0A2I4FAX6|A0A2I4FAX6_9ROSI (AP2-like ethylene-responsive transcription factor TOE3 isoform X2 OS=Juglans regia OX=51240 GN=LOC108997119 PE=4 SV=1)

HSP 1 Score: 197.6 bits (501), Expect = 3.9e-47
Identity = 120/186 (64.52%), Postives = 129/186 (69.35%), Query Frame = 0


Query: 21  MEDSETSNSSVVNADEVCNS-RDEDSS----VLIF------NXXXXXXXXXXXXXXXPEL 80
           MEDS TS SSVVNA+E  N+ RDEDSS      IF      N               PEL
Sbjct: 36  MEDSGTSTSSVVNAEEAPNNVRDEDSSNNSPEFIFDILRKENHGIRSGKEFKDETPAPEL 95

Query: 81  VTQALFPV----AGGWGETGSPV-PKSHWLNLSSTGDFVGEGVGGGTAELKIVQQKQQQV 140
           VT++LFPV     GG  E GS    +  WLNLS   D       GG AEL+I+QQKQQQV
Sbjct: 96  VTRSLFPVTGETGGGESEFGSGFSSRPQWLNLSFAHD------SGGQAELRILQQKQQQV 155

Query: 141 RKSRRGPRSRSSQYRGVTFYRRTGRWESHIWDCGKQVYLGGFDTAHAAARAYDRAAIKFR 191
           RKSRRGPRSRSSQYRGVTFYRRTGRWESHIWDCGKQVYLGGFDTAHAAARAYDRAAIKFR
Sbjct: 156 RKSRRGPRSRSSQYRGVTFYRRTGRWESHIWDCGKQVYLGGFDTAHAAARAYDRAAIKFR 215

[Close]

BLAST of Carg25664 vs. TrEMBL
Match: tr|A0A2P6SJR1|A0A2P6SJR1_ROSCH (Putative transcription factor AP2-EREBP family OS=Rosa chinensis OX=74649 GN=RchiOBHm_Chr1g0364341 PE=4 SV=1)

HSP 1 Score: 179.5 bits (454), Expect = 1.1e-41
Identity = 105/183 (57.38%), Postives = 121/183 (66.12%), Query Frame = 0


Query: 22  EDSETSNSSVVNADEVCNSRDEDSSVLIF-----NXXXXXXXXXXXXXXXPELVTQALFP 81
           EDS +S+SSVVNA+E  +S   ++S  IF     +               PE  T++LFP
Sbjct: 32  EDSGSSDSSVVNAEE--DSYSNNTSPFIFDILKKDKHGLCNNKEDQIVPSPEFATRSLFP 91

Query: 82  VAG---------GWGETGSPVPKSHWLNLSSTGDFVGEGVGGGTAELKIVQQKQQQVRKS 141
           V G         G   + +   +  WLNLS           GG AELK+VQQKQQQ RKS
Sbjct: 92  VTGDGXXXXXXLGLLASSNSTSRPQWLNLSF-------AESGGQAELKVVQQKQQQARKS 151

Query: 142 RRGPRSRSSQYRGVTFYRRTGRWESHIWDCGKQVYLGGFDTAHAAARAYDRAAIKFRGVN 191
           RRGPRSRSSQYRGVTFYRRTGRWESHIWDCGKQVYLGGFDTAH+AA+AYDRAAIKFRGV+
Sbjct: 152 RRGPRSRSSQYRGVTFYRRTGRWESHIWDCGKQVYLGGFDTAHSAAKAYDRAAIKFRGVD 205

The following BLAST results are available for this feature:

BLAST of Carg25664 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022942115.1	1.3e-134	77.20	ethylene-responsive transcription factor RAP2-7-like isoform X2 [Cucurbita mosch...	[more]
XP_022991369.1	2.9e-131	72.33	ethylene-responsive transcription factor RAP2-7-like isoform X2 [Cucurbita maxim...	[more]
XP_023517304.1	7.2e-130	75.07	ethylene-responsive transcription factor RAP2-7-like isoform X2 [Cucurbita pepo ...	[more]
XP_022942114.1	3.5e-116	77.26	ethylene-responsive transcription factor RAP2-7-like isoform X1 [Cucurbita mosch...	[more]
XP_022942116.1	3.5e-116	77.26	ethylene-responsive transcription factor RAP2-7-like isoform X3 [Cucurbita mosch...	[more]

BLAST of Carg25664 vs. TAIR10


Match Name	E-value	Identity	Description
AT5G60120.2	7.1e-39	54.42	target of early activation tagged (EAT) 2	[more]
AT4G36920.1	8.7e-37	63.20	Integrase-type DNA-binding superfamily protein	[more]
AT2G28550.3	7.4e-36	50.82	related to AP2.7	[more]
AT3G54990.1	8.2e-35	65.29	Integrase-type DNA-binding superfamily protein	[more]
AT5G67180.1	7.7e-33	63.25	target of early activation tagged (EAT) 3	[more]

BLAST of Carg25664 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|Q9LVG2\|TOE2_ARATH	1.3e-37	54.42	AP2-like ethylene-responsive transcription factor TOE2 OS=Arabidopsis thaliana O...	[more]
sp\|P47927\|AP2_ARATH	1.6e-35	63.20	Floral homeotic protein APETALA 2 OS=Arabidopsis thaliana OX=3702 GN=AP2 PE=1 SV...	[more]
sp\|Q9SK03\|RAP27_ARATH	1.3e-34	50.82	Ethylene-responsive transcription factor RAP2-7 OS=Arabidopsis thaliana OX=3702 ...	[more]
sp\|Q6PV68\|SMZ_ARATH	1.5e-33	65.29	AP2-like ethylene-responsive transcription factor SMZ OS=Arabidopsis thaliana OX...	[more]
sp\|Q9FH95\|TOE3_ARATH	1.4e-31	63.25	AP2-like ethylene-responsive transcription factor TOE3 OS=Arabidopsis thaliana O...	[more]

BLAST of Carg25664 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A1S3BEB5\|A0A1S3BEB5_CUCME	3.9e-55	49.85	ethylene-responsive transcription factor RAP2-7 OS=Cucumis melo OX=3656 GN=LOC10...	[more]
tr\|A0A0A0KLE4\|A0A0A0KLE4_CUCSA	6.6e-55	50.91	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G175970 PE=4 SV=1	[more]
tr\|A0A2I4FAW9\|A0A2I4FAW9_9ROSI	3.9e-47	64.52	AP2-like ethylene-responsive transcription factor TOE3 isoform X1 OS=Juglans reg...	[more]
tr\|A0A2I4FAX6\|A0A2I4FAX6_9ROSI	3.9e-47	64.52	AP2-like ethylene-responsive transcription factor TOE3 isoform X2 OS=Juglans reg...	[more]
tr\|A0A2P6SJR1\|A0A2P6SJR1_ROSCH	1.1e-41	57.38	Putative transcription factor AP2-EREBP family OS=Rosa chinensis OX=74649 GN=Rch...	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Molecular Function**
Term	Definition
GO:0003677	DNA binding
GO:0003700	transcription factor activity, sequence-specific DNA binding

Vocabulary: **Biological Process**
Term	Definition
GO:0006355	regulation of transcription, DNA-templated

Vocabulary: **INTERPRO**
Term	Definition
IPR016177	DNA-bd_dom_sf
IPR036955	AP2/ERF_dom_sf
IPR001471	AP2/ERF_dom

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006355	regulation of transcription, DNA-templated
cellular_component	GO:0005667	transcription factor complex
molecular_function	GO:0003677	DNA binding
molecular_function	GO:0003700	transcription factor activity, sequence-specific DNA binding

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg25664-RA	Carg25664-RA	mRNA

InterPro

Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001471	AP2/ERF domain	SMART	SM00380	rav1_2	coord: 137..199 e-value: 3.4E-24 score: 96.4
IPR001471	AP2/ERF domain	PFAM	PF00847	AP2	coord: 136..185 e-value: 3.1E-9 score: 36.8
IPR001471	AP2/ERF domain	PROSITE	PS51032	AP2_ERF	coord: 137..193 score: 16.357
IPR036955	AP2/ERF domain superfamily	GENE3D	G3DSA:3.30.730.10		coord: 136..192 e-value: 1.2E-16 score: 62.3
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 228..290
None	No IPR available	PANTHER	PTHR32467:SF46	AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR SMZ-RELATED	coord: 14..190
None	No IPR available	PANTHER	PTHR32467	FAMILY NOT NAMED	coord: 14..190
IPR016177	DNA-binding domain superfamily	SUPERFAMILY	SSF54171	DNA-binding domain	coord: 136..188

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Carg25664	Cla020081	Watermelon (97103) v1	carwmB0852
Carg25664	Csa5G175970	Cucumber (Chinese Long) v2	carcuB0867
Carg25664	MELO3C011722	Melon (DHL92) v3.5.1	carmeB0841
Carg25664	ClCG02G013820	Watermelon (Charleston Gray)	carwcgB0825
Carg25664	CSPI05G08910	Wild cucumber (PI 183967)	carcpiB0887
Carg25664	CmaCh04G002620	Cucurbita maxima (Rimu)	carcmaB1179
Carg25664	CmaCh04G012360	Cucurbita maxima (Rimu)	carcmaB1180
Carg25664	CmoCh04G002690	Cucurbita moschata (Rifu)	carcmoB1148
Carg25664	CmoCh04G013100	Cucurbita moschata (Rifu)	carcmoB1149
Carg25664	Lsi04G008190	Bottle gourd (USVL1VR-Ls)	carlsiB774
Carg25664	Cp4.1LG01g10310	Cucurbita pepo (Zucchini)	carcpeB1187
Carg25664	Cp4.1LG01g04250	Cucurbita pepo (Zucchini)	carcpeB1186
Carg25664	CsGy5G006280	Cucumber (Gy14) v2	carcgybB0841
Carg25664	MELO3C011722.2	Melon (DHL92) v3.6.1	carmedB0852
Carg25664	CsaV3_5G006350	Cucumber (Chinese Long) v3	carcucB0892
Carg25664	Cla97C02G039460	Watermelon (97103) v2	carwmbB0888
Carg25664	Bhi07G000868	Wax gourd	carwgoB0992

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
Carg25664	Carg02071	Silver-seed gourd	carcarB625

The following block(s) are covering this gene:

None