Carg25624 (gene) Silver-seed gourd | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Carg25624
Type	gene
Organism	Cucurbita argyrosperma (Silver-seed gourd)
Description	Coiled-coil domain-containing protein 25
Location	Cucurbita_argyrosperma_scaffold_357 : 17911 .. 20518 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TCCGTGAGTCGCCGGATTAAATATATATTATTCACGCTATCCTGGAATATCGGTGTCCGATTAATATCGCACACAGAAGACCAATCTCTCTCTATTCTCCCGAATTGAAAACCCTAATTCGTTCTTTTCTCTCCATTTTCGTTCTTGCGAGCGTCGAGCATAACGAAATCGAAGCGCCATGGTTTTCTATTTCAAAGCTCGGCCCGACGTCGGCGATTACACAATTTTCATGGGGCTCGATAAGCATGAGAACGAGGAGCTCATCAAATACGGCTTCCCCGAGGATATCTGGTAATTTTTCGTTAAGGTTTTCTTTATTGTTTCTGTTTCTTTCTTCGGTTGTTATTTGATGTTAATTTCATTCGGATTGGATGAAAACGATTTCTCAGAATTAATCAAGTCAGGTAGAAGTGTTGATGTTTTCGTTCTTGCTTGATGGTTTTCGAAATTGATATTCGAATTCCTCTTGACTTGAATGCTACGTTATTTTGTGCGGTTGCTGCTGGCTTTGATTTATATAAAAATGGTAGCCATGGCCATCCCTGGTTCTCTTTTCAGAGCTCGATGAAACTGAAACTTAACATTATGAAGGGAATGAGTTTCTTGTCTGCATTGATACCTTGAATTTTGTTTGCGTAATCCTTATCCAGTGATACTGGACTTGGATTTATCTTTTTCTTGAATTTTGTTAGTCTTAATTTTCATTTTAGGGAGGATTTGGCTTAAGATTTCTTCTCTGAACAAAGGTTGTTTCGTGTAGGTTTCACGTGGACAAGATGTCGTCTGCCCATGTTTATGTGAGACTGCGAAGAGGGCAGACCATTGATGATATAAGTGAAGGGTTGCTGGAGGATTGTGTTCAGCTTGTCAAAGCAAATTCTATTCAAGGTAGAAATTGAGCAGTCTATTTCTAGAAAATAAAAAAATGATGAACAAGTGAACTAGGTTTGCCTGTATTTTCGTCCTTCAATTGGAACTTTAAGACGCATGTGCACGTTTCTGCGGATGACAGTGAAATTGTGTCGCAAGTTAGGAGCCTTTTAACTATTGGCCCTTTTTTCTGGCAGGAAACAAGGTAAACAACATTGATGTCGTGTATACGCCTTGGGCTAATTTGAAGAAAACTGCTTCCATGGATGTTGGCCAAGTTGGTTTTCATAACCCCAAGATGGTAAGGTTCATAGTTTGAATTTGGCGAGTTGATATGTCCCTACGGTTATTTTTTCTTGTCTTTCTTTATTGTTTTAAATAAGTTTTTGTGCATCTTTTATGGATGGGAATATTAAAGGTGATTTACACAACCTTTGTCTTTGTATACAATTCAGGTCCGAACCGTAAGGGTGGAAAAACGGATCAATGACATTGTCAATAGATTGAACAGGACTAAAGTGGAAAGGAAGCCTGATTTGAAAGGTAAATTGGAAATGACATTGTTGTTTTATGTTGTCTTCACCTTTTGCATATGCACGTTTTTTTGTTAACTCAAATATGCTGTCGCTATTCCTAGCACGTTTAGGCACAACTAGTATGAGCTTCACTGTAATGATCCAAGTCCACCGCTAGCGGATATTGTCCTTTTTGGGTTTTTTCCTTCTGGGCTTTCCTTCAAGGTTTTTACAACGCATATGCTAGGGAGAGTTTCCACACCCTTATAAAGAGTGTTTCGTTCTCCTCCCCAACCGGAGTGGGATCTCACATTCACATATTTTGTTGGTTTGTTTTTTTTTATTATTATTTTCTTTTTTTTGTATAAAATAGTTAACGAACACTTTGTTTTCTGCTACACAGCTGAACGCGAAGCTGTGAATGCAGCTGAAAGAGCAGAGAGGAAGCAACACCTGAGAGAAAAGGTTGGTGTCAATTTTTTTGTTCCATTTCTGAATTAACTCCTTTTTGTGGTCTCTACATCTTGGATTTCTATGTTTTAGCTTTTCTGAAATTTCCGCATAGATAGTTTGGCCATGTCTTTACTTACACACAGCAAGATTTACTCCTCTGTGAAACGAAATTCCTTTTGTCAAATATTTTGCAAGTGACTACGATCATATTGATCATTTGGCAGCGTATGTTATTATGTTTAGTCTCTATCAAATCTATTAGTCCGACTCGGTTTTGTTGCCTAGGTCAGGTGGTTTTCTCGAAGTATTATGATTTTTTTTTTTTATATCTCGCTGTAGTGAAGTTTCCTTTTTACAGAAACGTCGCGAGGAAATGGACAGGTTAGAAAAAGAGAGGCAAGCTGAGCTAAGGAGCTACAGTGGTTTGATGGTCTCTGAGAAGATGACATCTAACAAACAAATTGCAGCGGCAAACAAATCGCTACAAGAGCTGGAGGACGATTTCATGTGATCGAATTGATCAGTACAAATGCTGCAAAAAAAATAGCAGCAGCTAAACTTACTCTTCTTAGAGGTCATTTGCCCATTCAGTTTATGGTTCTGTCCTCTCACAGGTGATCAAATCGTCTTTAGCCTCGATGATATTCAACTTGGCGTCTACTTGATGACTATACAAATAGAAAATCGAGAGCGGAAAAATGGTCTTCTTTAAGTTGTAATTACTGTCACACTCTTGTTTAACGAGACGATAAGTTGGCTCGTTTTGGCGT

mRNA sequence

TCCGTGAGTCGCCGGATTAAATATATATTATTCACGCTATCCTGGAATATCGGTGTCCGATTAATATCGCACACAGAAGACCAATCTCTCTCTATTCTCCCGAATTGAAAACCCTAATTCGTTCTTTTCTCTCCATTTTCGTTCTTGCGAGCGTCGAGCATAACGAAATCGAAGCGCCATGGTTTTCTATTTCAAAGCTCGGCCCGACGTCGGCGATTACACAATTTTCATGGGGCTCGATAAGCATGAGAACGAGGAGCTCATCAAATACGGCTTCCCCGAGGATATCTGGTTTCACGTGGACAAGATGTCGTCTGCCCATGTTTATGTGAGACTGCGAAGAGGGCAGACCATTGATGATATAAGTGAAGGGTTGCTGGAGGATTGTGTTCAGCTTGTCAAAGCAAATTCTATTCAAGGAAACAAGGTAAACAACATTGATGTCGTGTATACGCCTTGGGCTAATTTGAAGAAAACTGCTTCCATGGATGTTGGCCAAGTTGGTTTTCATAACCCCAAGATGGTCCGAACCGTAAGGGTGGAAAAACGGATCAATGACATTGTCAATAGATTGAACAGGACTAAAGTGGAAAGGAAGCCTGATTTGAAAGCTGTGAATGCAGCTGAAAGAGCAGAGAGGAAGCAACACCTGAGAGAAAAGAAACGTCGCGAGGAAATGGACAGGTTAGAAAAAGAGAGGCAAGCTGAGCTAAGGAGCTACAGTGGTTTGATGGTCTCTGAGAAGATGACATCTAACAAACAAATTGCAGCGGCAAACAAATCGCTACAAGAGCTGGAGGACGATTTCATGTGATCGAATTGATCAGTACAAATGCTGCAAAAAAAATAGCAGCAGCTAAACTTACTCTTCTTAGAGGTCATTTGCCCATTCAGTTTATGGTTCTGTCCTCTCACAGGTGATCAAATCGTCTTTAGCCTCGATGATATTCAACTTGGCGTCTACTTGATGACTATACAAATAGAAAATCGAGAGCGGAAAAATGGTCTTCTTTAAGTTGTAATTACTGTCACACTCTTGTTTAACGAGACGATAAGTTGGCTCGTTTTGGCGT

Coding sequence (CDS)

ATGGTTTTCTATTTCAAAGCTCGGCCCGACGTCGGCGATTACACAATTTTCATGGGGCTCGATAAGCATGAGAACGAGGAGCTCATCAAATACGGCTTCCCCGAGGATATCTGGTTTCACGTGGACAAGATGTCGTCTGCCCATGTTTATGTGAGACTGCGAAGAGGGCAGACCATTGATGATATAAGTGAAGGGTTGCTGGAGGATTGTGTTCAGCTTGTCAAAGCAAATTCTATTCAAGGAAACAAGGTAAACAACATTGATGTCGTGTATACGCCTTGGGCTAATTTGAAGAAAACTGCTTCCATGGATGTTGGCCAAGTTGGTTTTCATAACCCCAAGATGGTCCGAACCGTAAGGGTGGAAAAACGGATCAATGACATTGTCAATAGATTGAACAGGACTAAAGTGGAAAGGAAGCCTGATTTGAAAGCTGTGAATGCAGCTGAAAGAGCAGAGAGGAAGCAACACCTGAGAGAAAAGAAACGTCGCGAGGAAATGGACAGGTTAGAAAAAGAGAGGCAAGCTGAGCTAAGGAGCTACAGTGGTTTGATGGTCTCTGAGAAGATGACATCTAACAAACAAATTGCAGCGGCAAACAAATCGCTACAAGAGCTGGAGGACGATTTCATGTGA

Protein sequence

MVFYFKARPDVGDYTIFMGLDKHENEELIKYGFPEDIWFHVDKMSSAHVYVRLRRGQTIDDISEGLLEDCVQLVKANSIQGNKVNNIDVVYTPWANLKKTASMDVGQVGFHNPKMVRTVRVEKRINDIVNRLNRTKVERKPDLKAVNAAERAERKQHLREKKRREEMDRLEKERQAELRSYSGLMVSEKMTSNKQIAAANKSLQELEDDFM

Homology

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BLAST of Carg25624 vs. NCBI nr
Match: XP_022941472.1 (coiled-coil domain-containing protein 25 [Cucurbita moschata])

HSP 1 Score: 370.5 bits (950), Expect = 3.7e-99
Identity = 202/215 (93.95%), Postives = 202/215 (93.95%), Query Frame = 0


Query: 1   MVFYFKARPDVGDYTIFMGLDKHENEELIKYGFPEDIWFHVDKMSSAHVYVRLRRGQTID 60
           MVFYFKARPDVGDYTIFMGLDKHENEELIKYGFPEDIWFHVDKMSSAHVYVRLRRGQTID
Sbjct: 1   MVFYFKARPDVGDYTIFMGLDKHENEELIKYGFPEDIWFHVDKMSSAHVYVRLRRGQTID 60

Query: 61  DISEGLLEDCVQLVKANSIQGNKVNNIDVVYTPWANLKKTASMDVGQVGFHNPKMVRTVR 120
           DISEGLLEDCVQLVKANSIQGNKVNNIDVVYTPWANLKKTASMDVGQVGFHNPKMVRTVR
Sbjct: 61  DISEGLLEDCVQLVKANSIQGNKVNNIDVVYTPWANLKKTASMDVGQVGFHNPKMVRTVR 120

Query: 121 VEKRINDIVNRLNRTKVERKPDLK----AVNAAERAERXXXXXXXXXXXXXXXXXXXRQA 180
           VEKRINDIVNRLNRTKVERKPDLK    AVNAAERAER     XXXXXXXXXX    RQA
Sbjct: 121 VEKRINDIVNRLNRTKVERKPDLKAEREAVNAAERAERKQHLRXXXXXXXXXXLEKERQA 180

Query: 181 ELRSYSGLMVSEKMTSNKQIAAANKSLQELEDDFM 212
           ELRSYSGLMVSEKMTSNKQIAAANKSLQELEDDFM
Sbjct: 181 ELRSYSGLMVSEKMTSNKQIAAANKSLQELEDDFM 215

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BLAST of Carg25624 vs. NCBI nr
Match: XP_023524375.1 (coiled-coil domain-containing protein 25-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 367.5 bits (942), Expect = 3.1e-98
Identity = 201/215 (93.49%), Postives = 201/215 (93.49%), Query Frame = 0


Query: 1   MVFYFKARPDVGDYTIFMGLDKHENEELIKYGFPEDIWFHVDKMSSAHVYVRLRRGQTID 60
           MVFYFKAR DVGDYTIFMGLDKHENEELIKYGFPEDIWFHVDKMSSAHVYVRLRRGQTID
Sbjct: 1   MVFYFKARSDVGDYTIFMGLDKHENEELIKYGFPEDIWFHVDKMSSAHVYVRLRRGQTID 60

Query: 61  DISEGLLEDCVQLVKANSIQGNKVNNIDVVYTPWANLKKTASMDVGQVGFHNPKMVRTVR 120
           DISEGLLEDCVQLVKANSIQGNKVNNIDVVYTPWANLKKTASMDVGQVGFHNPKMVRTVR
Sbjct: 61  DISEGLLEDCVQLVKANSIQGNKVNNIDVVYTPWANLKKTASMDVGQVGFHNPKMVRTVR 120

Query: 121 VEKRINDIVNRLNRTKVERKPDLK----AVNAAERAERXXXXXXXXXXXXXXXXXXXRQA 180
           VEKRINDIVNRLNRTKVERKPDLK    AVNAAERAER     XXXXXXXXXX    RQA
Sbjct: 121 VEKRINDIVNRLNRTKVERKPDLKAEREAVNAAERAERKQHLRXXXXXXXXXXLEKERQA 180

Query: 181 ELRSYSGLMVSEKMTSNKQIAAANKSLQELEDDFM 212
           ELRSYSGLMVSEKMTSNKQIAAANKSLQELEDDFM
Sbjct: 181 ELRSYSGLMVSEKMTSNKQIAAANKSLQELEDDFM 215

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BLAST of Carg25624 vs. NCBI nr
Match: XP_022982049.1 (coiled-coil domain-containing protein 25 [Cucurbita maxima])

HSP 1 Score: 365.9 bits (938), Expect = 9.1e-98
Identity = 200/215 (93.02%), Postives = 200/215 (93.02%), Query Frame = 0


Query: 1   MVFYFKARPDVGDYTIFMGLDKHENEELIKYGFPEDIWFHVDKMSSAHVYVRLRRGQTID 60
           MVFYFKARPDVGDYTIFMGLDKHENEELIKYGFPEDIWFHVDKMSSAHVYVRLRRGQTID
Sbjct: 1   MVFYFKARPDVGDYTIFMGLDKHENEELIKYGFPEDIWFHVDKMSSAHVYVRLRRGQTID 60

Query: 61  DISEGLLEDCVQLVKANSIQGNKVNNIDVVYTPWANLKKTASMDVGQVGFHNPKMVRTVR 120
           DISEGLLEDCVQLVKANSIQGNKVNNIDVVYT WANLKKTASMDVGQVGFHNPKMVRTVR
Sbjct: 61  DISEGLLEDCVQLVKANSIQGNKVNNIDVVYTSWANLKKTASMDVGQVGFHNPKMVRTVR 120

Query: 121 VEKRINDIVNRLNRTKVERKPDLK----AVNAAERAERXXXXXXXXXXXXXXXXXXXRQA 180
           VEKRINDIVNRLNRTKVERKPDLK    AVNAAERAER     XXXXXXXXXX    RQA
Sbjct: 121 VEKRINDIVNRLNRTKVERKPDLKAEREAVNAAERAERKQHLRXXXXXXXXXXLEKERQA 180

Query: 181 ELRSYSGLMVSEKMTSNKQIAAANKSLQELEDDFM 212
           ELRSYSGLMVSEKMTSNKQIAA NKSLQELEDDFM
Sbjct: 181 ELRSYSGLMVSEKMTSNKQIAATNKSLQELEDDFM 215

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BLAST of Carg25624 vs. NCBI nr
Match: XP_022139971.1 (coiled-coil domain-containing protein 25 [Momordica charantia])

HSP 1 Score: 357.8 bits (917), Expect = 2.5e-95
Identity = 184/215 (85.58%), Postives = 189/215 (87.91%), Query Frame = 0


Query: 1   MVFYFKARPDVGDYTIFMGLDKHENEELIKYGFPEDIWFHVDKMSSAHVYVRLRRGQTID 60
           MVFYFKARPDVGDYTIFMGLDK+ENEELIKYGFPEDIWFHVDKMSSAHVYVRL++GQTID
Sbjct: 1   MVFYFKARPDVGDYTIFMGLDKYENEELIKYGFPEDIWFHVDKMSSAHVYVRLQKGQTID 60

Query: 61  DISEGLLEDCVQLVKANSIQGNKVNNIDVVYTPWANLKKTASMDVGQVGFHNPKMVRTVR 120
           DISEGLLEDC QLVKANSIQGNKVNNIDVVYTPW+NLKKTASMDVGQVGFHNPKMVRTVR
Sbjct: 61  DISEGLLEDCAQLVKANSIQGNKVNNIDVVYTPWSNLKKTASMDVGQVGFHNPKMVRTVR 120

Query: 121 VEKRINDIVNRLNRTKVERKPDLK----AVNAAERAERXXXXXXXXXXXXXXXXXXXRQA 180
           VEKRINDIVNRLNRTKVERKPDLK    AVNAAERAER                   RQA
Sbjct: 121 VEKRINDIVNRLNRTKVERKPDLKAEREAVNAAERAERKQHLREKKRREELDRLEKERQA 180

Query: 181 ELRSYSGLMVSEKMTSNKQIAAANKSLQELEDDFM 212
           ELRSY GLMVSEKMTSNKQIAA +KSLQELEDDFM
Sbjct: 181 ELRSYKGLMVSEKMTSNKQIAATSKSLQELEDDFM 215

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BLAST of Carg25624 vs. NCBI nr
Match: XP_004136294.1 (PREDICTED: coiled-coil domain-containing protein 25 [Cucumis sativus] >KGN60206.1 hypothetical protein Csa_3G889140 [Cucumis sativus])

HSP 1 Score: 354.0 bits (907), Expect = 3.6e-94
Identity = 195/215 (90.70%), Postives = 200/215 (93.02%), Query Frame = 0


Query: 1   MVFYFKARPDVGDYTIFMGLDKHENEELIKYGFPEDIWFHVDKMSSAHVYVRLRRGQTID 60
           MVFYFKARPDVGDYTIFMGLDK+ENEELIKYGF EDIWFHVDKMSSAHVYVRL++GQTID
Sbjct: 1   MVFYFKARPDVGDYTIFMGLDKYENEELIKYGFIEDIWFHVDKMSSAHVYVRLQKGQTID 60

Query: 61  DISEGLLEDCVQLVKANSIQGNKVNNIDVVYTPWANLKKTASMDVGQVGFHNPKMVRTVR 120
           DISEGLLEDC QLVKANSIQGNKVNNIDVVYTPW+NLKKTASMDVGQVGFHNPKMVRTVR
Sbjct: 61  DISEGLLEDCAQLVKANSIQGNKVNNIDVVYTPWSNLKKTASMDVGQVGFHNPKMVRTVR 120

Query: 121 VEKRINDIVNRLNRTKVERKPDLK----AVNAAERAERXXXXXXXXXXXXXXXXXXXRQA 180
           VEKRINDIVNRLNRTKVERKPDLK    AVNAAERAER       XXXXXXXXXXXXRQA
Sbjct: 121 VEKRINDIVNRLNRTKVERKPDLKAEREAVNAAERAERKQHLRDKXXXXXXXXXXXXRQA 180

Query: 181 ELRSYSGLMVSEKMTSNKQIAAANKSLQELEDDFM 212
           ELRSY GLMVSEKMTSNKQIAA +KSLQELEDDFM
Sbjct: 181 ELRSYKGLMVSEKMTSNKQIAATSKSLQELEDDFM 215

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BLAST of Carg25624 vs. TAIR10
Match: AT5G11500.1 (unknown protein)

HSP 1 Score: 334.7 bits (857), Expect = 4.1e-92
Identity = 169/215 (78.60%), Postives = 186/215 (86.51%), Query Frame = 0


Query: 1   MVFYFKARPDVGDYTIFMGLDKHENEELIKYGFPEDIWFHVDKMSSAHVYVRLRRGQTID 60
           MVFYFKARPD GDYTIFMGLDK ENEELIKYGFPED+WFHVDKMSSAHVY+RL RGQ+ D
Sbjct: 1   MVFYFKARPDAGDYTIFMGLDKFENEELIKYGFPEDVWFHVDKMSSAHVYLRLHRGQSFD 60

Query: 61  DISEGLLEDCVQLVKANSIQGNKVNNIDVVYTPWANLKKTASMDVGQVGFHNPKMVRTVR 120
           DISEG+LEDC QLVKANSIQGNKVNN+DVVYTPW+NLKKTASMDVGQVGFHN KMVRT+R
Sbjct: 61  DISEGVLEDCAQLVKANSIQGNKVNNVDVVYTPWSNLKKTASMDVGQVGFHNSKMVRTIR 120

Query: 121 VEKRINDIVNRLNRTKVERKPDLK----AVNAAERAERXXXXXXXXXXXXXXXXXXXRQA 180
           VEKR+N+IVNRLN+TKVER PDL+    AVNAAERAER       XXX         RQ+
Sbjct: 121 VEKRVNEIVNRLNKTKVERTPDLRAEREAVNAAERAERKQHLREKXXXEEIDRLEKERQS 180

Query: 181 ELRSYSGLMVSEKMTSNKQIAAANKSLQELEDDFM 212
           E+RSY GLMV++KMTSNK IA++NKSLQELEDDFM
Sbjct: 181 EMRSYKGLMVTDKMTSNKDIASSNKSLQELEDDFM 215

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BLAST of Carg25624 vs. Swiss-Prot
Match: sp|Q7T312|CCD25_DANRE (Coiled-coil domain-containing protein 25 OS=Danio rerio OX=7955 GN=ccdc25 PE=1 SV=1)

HSP 1 Score: 207.2 bits (526), Expect = 1.8e-52
Identity = 98/145 (67.59%), Postives = 120/145 (82.76%), Query Frame = 0


Query: 1   MVFYFKARPDVGDYTIFMGLDKHENEELIKYGFPEDIWFHVDKMSSAHVYVRLRRGQTID 60
           MVFYF +      +TI+MG DK+ENE+LIKYG+PEDIWFHVDK+SSAHVY+R+ +G TID
Sbjct: 1   MVFYFTSAVVSPPHTIYMGKDKYENEDLIKYGWPEDIWFHVDKLSSAHVYLRMPKGTTID 60

Query: 61  DISEGLLEDCVQLVKANSIQGNKVNNIDVVYTPWANLKKTASMDVGQVGFHNPKMVRTVR 120
           DI + +L DCVQLVK NSIQG K+NNI++VYTPW+NLKKTA MD+GQ+GFH  K V+ V 
Sbjct: 61  DIPKEVLIDCVQLVKNNSIQGCKMNNINIVYTPWSNLKKTADMDIGQIGFHRQKEVKIVA 120

Query: 121 VEKRINDIVNRLNRTKVERKPDLKA 146
           VEK+IN+IVNRL +TK ER PDL A
Sbjct: 121 VEKKINEIVNRLEKTKEERYPDLAA 145

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BLAST of Carg25624 vs. Swiss-Prot
Match: sp|Q3SZX8|CCD25_BOVIN (Coiled-coil domain-containing protein 25 OS=Bos taurus OX=9913 GN=CCDC25 PE=2 SV=1)

HSP 1 Score: 204.5 bits (519), Expect = 1.1e-51
Identity = 124/199 (62.31%), Postives = 153/199 (76.88%), Query Frame = 0


Query: 1   MVFYF-KARPDVGDYTIFMGLDKHENEELIKYGFPEDIWFHVDKMSSAHVYVRLRRGQTI 60
           MVFYF  +  +   YTI+MG DK+ENE+LIKYG+PEDIWFHVDK+SSAHVY+RL +G+ I
Sbjct: 1   MVFYFTSSSVNSSAYTIYMGKDKYENEDLIKYGWPEDIWFHVDKLSSAHVYLRLHKGEKI 60

Query: 61  DDISEGLLEDCVQLVKANSIQGNKVNNIDVVYTPWANLKKTASMDVGQVGFHNPKMVRTV 120
           +DI + +L DC  LVKANSIQG K+NN++VVYTPW+NLKKTA MDVGQ+GFH  K V+ V
Sbjct: 61  EDIPKEVLMDCAHLVKANSIQGCKMNNVNVVYTPWSNLKKTADMDVGQIGFHRQKDVKIV 120

Query: 121 RVEKRINDIVNRLNRTKVERKPDLKAVNAA----ERAERXXXXXXXXXXXXXXXXXXXRQ 180
            VEK++N+I+NRL +TK+ER PDL+A        ER E+ XXXXXXXXXXXXXXXXXX  
Sbjct: 121 TVEKKVNEILNRLEKTKMERFPDLEAEKECRDHEERNEKKXXXXXXXXXXXXXXXXXXXX 180

Query: 181 AELRSYSGLMVSEKMTSNK 195
                 S LM  E M+SN+
Sbjct: 181 XXXXXXSSLMKVENMSSNQ 199

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BLAST of Carg25624 vs. Swiss-Prot
Match: sp|Q86WR0|CCD25_HUMAN (Coiled-coil domain-containing protein 25 OS=Homo sapiens OX=9606 GN=CCDC25 PE=1 SV=2)

HSP 1 Score: 203.8 bits (517), Expect = 1.9e-51
Identity = 99/156 (63.46%), Postives = 125/156 (80.13%), Query Frame = 0


Query: 1   MVFYF-KARPDVGDYTIFMGLDKHENEELIKYGFPEDIWFHVDKMSSAHVYVRLRRGQTI 60
           MVFYF  +  +   YTI+MG DK+ENE+LIK+G+PEDIWFHVDK+SSAHVY+RL +G+ I
Sbjct: 1   MVFYFTSSSVNSSAYTIYMGKDKYENEDLIKHGWPEDIWFHVDKLSSAHVYLRLHKGENI 60

Query: 61  DDISEGLLEDCVQLVKANSIQGNKVNNIDVVYTPWANLKKTASMDVGQVGFHNPKMVRTV 120
           +DI + +L DC  LVKANSIQG K+NN++VVYTPW+NLKKTA MDVGQ+GFH  K V+ V
Sbjct: 61  EDIPKEVLMDCAHLVKANSIQGCKMNNVNVVYTPWSNLKKTADMDVGQIGFHRQKDVKIV 120

Query: 121 RVEKRINDIVNRLNRTKVERKPDLKA-VNAAERAER 155
            VEK++N+I+NRL +TKVER PDL A     +R ER
Sbjct: 121 TVEKKVNEILNRLEKTKVERFPDLAAEKECRDREER 156

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BLAST of Carg25624 vs. Swiss-Prot
Match: sp|Q78PG9|CCD25_MOUSE (Coiled-coil domain-containing protein 25 OS=Mus musculus OX=10090 GN=Ccdc25 PE=1 SV=1)

HSP 1 Score: 203.8 bits (517), Expect = 1.9e-51
Identity = 95/146 (65.07%), Postives = 122/146 (83.56%), Query Frame = 0


Query: 1   MVFYF-KARPDVGDYTIFMGLDKHENEELIKYGFPEDIWFHVDKMSSAHVYVRLRRGQTI 60
           MVFYF  +  +   YTI+MG DK+ENE+LIKYG+PEDIWFHVDK+SSAHVY+RL++G+ I
Sbjct: 1   MVFYFTSSSVNSSTYTIYMGKDKYENEDLIKYGWPEDIWFHVDKLSSAHVYLRLQKGEKI 60

Query: 61  DDISEGLLEDCVQLVKANSIQGNKVNNIDVVYTPWANLKKTASMDVGQVGFHNPKMVRTV 120
           +DI + +L DC  LVKANSIQG K+NN++VVYTPW+NLKKTA MDVGQ+GFH  K V+ V
Sbjct: 61  EDIPKEVLMDCAHLVKANSIQGCKMNNVNVVYTPWSNLKKTADMDVGQIGFHRQKDVKIV 120

Query: 121 RVEKRINDIVNRLNRTKVERKPDLKA 146
            VEK++N+I+NRL +TK+E+ PDL A
Sbjct: 121 TVEKKVNEILNRLEKTKLEKFPDLAA 146

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BLAST of Carg25624 vs. Swiss-Prot
Match: sp|Q5R9S1|CCD25_PONAB (Coiled-coil domain-containing protein 25 OS=Pongo abelii OX=9601 GN=CCDC25 PE=2 SV=2)

HSP 1 Score: 203.8 bits (517), Expect = 1.9e-51
Identity = 99/156 (63.46%), Postives = 125/156 (80.13%), Query Frame = 0


Query: 1   MVFYF-KARPDVGDYTIFMGLDKHENEELIKYGFPEDIWFHVDKMSSAHVYVRLRRGQTI 60
           MVFYF  +  +   YTI+MG DK+ENE+LIK+G+PEDIWFHVDK+SSAHVY+RL +G+ I
Sbjct: 1   MVFYFTSSSVNSSAYTIYMGKDKYENEDLIKHGWPEDIWFHVDKLSSAHVYLRLHKGENI 60

Query: 61  DDISEGLLEDCVQLVKANSIQGNKVNNIDVVYTPWANLKKTASMDVGQVGFHNPKMVRTV 120
           +DI + +L DC  LVKANSIQG K+NN++VVYTPW+NLKKTA MDVGQ+GFH  K V+ V
Sbjct: 61  EDIPKEVLMDCAHLVKANSIQGCKMNNVNVVYTPWSNLKKTADMDVGQIGFHRQKDVKIV 120

Query: 121 RVEKRINDIVNRLNRTKVERKPDLKA-VNAAERAER 155
            VEK++N+I+NRL +TKVER PDL A     +R ER
Sbjct: 121 TVEKKVNEILNRLEKTKVERFPDLAAEKECRDREER 156

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BLAST of Carg25624 vs. TrEMBL
Match: tr|A0A0A0LJJ0|A0A0A0LJJ0_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G889140 PE=4 SV=1)

HSP 1 Score: 354.0 bits (907), Expect = 2.4e-94
Identity = 195/215 (90.70%), Postives = 200/215 (93.02%), Query Frame = 0


Query: 1   MVFYFKARPDVGDYTIFMGLDKHENEELIKYGFPEDIWFHVDKMSSAHVYVRLRRGQTID 60
           MVFYFKARPDVGDYTIFMGLDK+ENEELIKYGF EDIWFHVDKMSSAHVYVRL++GQTID
Sbjct: 1   MVFYFKARPDVGDYTIFMGLDKYENEELIKYGFIEDIWFHVDKMSSAHVYVRLQKGQTID 60

Query: 61  DISEGLLEDCVQLVKANSIQGNKVNNIDVVYTPWANLKKTASMDVGQVGFHNPKMVRTVR 120
           DISEGLLEDC QLVKANSIQGNKVNNIDVVYTPW+NLKKTASMDVGQVGFHNPKMVRTVR
Sbjct: 61  DISEGLLEDCAQLVKANSIQGNKVNNIDVVYTPWSNLKKTASMDVGQVGFHNPKMVRTVR 120

Query: 121 VEKRINDIVNRLNRTKVERKPDLK----AVNAAERAERXXXXXXXXXXXXXXXXXXXRQA 180
           VEKRINDIVNRLNRTKVERKPDLK    AVNAAERAER       XXXXXXXXXXXXRQA
Sbjct: 121 VEKRINDIVNRLNRTKVERKPDLKAEREAVNAAERAERKQHLRDKXXXXXXXXXXXXRQA 180

Query: 181 ELRSYSGLMVSEKMTSNKQIAAANKSLQELEDDFM 212
           ELRSY GLMVSEKMTSNKQIAA +KSLQELEDDFM
Sbjct: 181 ELRSYKGLMVSEKMTSNKQIAATSKSLQELEDDFM 215

[Close]

BLAST of Carg25624 vs. TrEMBL
Match: tr|A0A2P5DTC1|A0A2P5DTC1_PARAD (Coiled-coil domain-containing protein OS=Parasponia andersonii OX=3476 GN=PanWU01x14_035630 PE=4 SV=1)

HSP 1 Score: 352.1 bits (902), Expect = 8.9e-94
Identity = 180/215 (83.72%), Postives = 188/215 (87.44%), Query Frame = 0


Query: 1   MVFYFKARPDVGDYTIFMGLDKHENEELIKYGFPEDIWFHVDKMSSAHVYVRLRRGQTID 60
           MVFYFKARP+VGDYTIFMGLDKHENEELIKYGFPEDIWFHVDKMSSAHVYVRL++GQTID
Sbjct: 1   MVFYFKARPEVGDYTIFMGLDKHENEELIKYGFPEDIWFHVDKMSSAHVYVRLQKGQTID 60

Query: 61  DISEGLLEDCVQLVKANSIQGNKVNNIDVVYTPWANLKKTASMDVGQVGFHNPKMVRTVR 120
           DISEGLLEDC QLVKANSIQGNKVNNIDVVYTPW+NLKKTASMDVGQVGFHN KMVRTVR
Sbjct: 61  DISEGLLEDCAQLVKANSIQGNKVNNIDVVYTPWSNLKKTASMDVGQVGFHNSKMVRTVR 120

Query: 121 VEKRINDIVNRLNRTKVERKPDLK----AVNAAERAERXXXXXXXXXXXXXXXXXXXRQA 180
           VEKRIN+IVNRLNRTKVERKPDLK    AVNAAERAER                   RQA
Sbjct: 121 VEKRINEIVNRLNRTKVERKPDLKAEREAVNAAERAERKQHLRDKKRREEIERLEKERQA 180

Query: 181 ELRSYSGLMVSEKMTSNKQIAAANKSLQELEDDFM 212
           E+RSY GLMVSE MTSNKQIA+ANKSLQELE+DFM
Sbjct: 181 EMRSYKGLMVSENMTSNKQIASANKSLQELEEDFM 215

[Close]

BLAST of Carg25624 vs. TrEMBL
Match: tr|A0A2P5G1J6|A0A2P5G1J6_9ROSA (Coiled-coil domain-containing protein OS=Trema orientalis OX=63057 GN=TorRG33x02_002320 PE=4 SV=1)

HSP 1 Score: 349.7 bits (896), Expect = 4.4e-93
Identity = 192/215 (89.30%), Postives = 200/215 (93.02%), Query Frame = 0


Query: 1   MVFYFKARPDVGDYTIFMGLDKHENEELIKYGFPEDIWFHVDKMSSAHVYVRLRRGQTID 60
           MVFYFKARP+VGDYTIFMGLDKHENEELIKYGFPEDIWFHVDKMSSAHVYVRL++GQTID
Sbjct: 1   MVFYFKARPEVGDYTIFMGLDKHENEELIKYGFPEDIWFHVDKMSSAHVYVRLQKGQTID 60

Query: 61  DISEGLLEDCVQLVKANSIQGNKVNNIDVVYTPWANLKKTASMDVGQVGFHNPKMVRTVR 120
           DISEGLLEDC QLVKANSIQGNKVNNIDVVYTPW+NLKKTASMDVGQVGFHN KMVRTVR
Sbjct: 61  DISEGLLEDCAQLVKANSIQGNKVNNIDVVYTPWSNLKKTASMDVGQVGFHNSKMVRTVR 120

Query: 121 VEKRINDIVNRLNRTKVERKPDLK----AVNAAERAERXXXXXXXXXXXXXXXXXXXRQA 180
           VEKRIN+IVNRLNRTKVERKPDLK    AVNAAERAER      XXXXXXXXXXXXX QA
Sbjct: 121 VEKRINEIVNRLNRTKVERKPDLKAEREAVNAAERAERKQHLRDXXXXXXXXXXXXXXQA 180

Query: 181 ELRSYSGLMVSEKMTSNKQIAAANKSLQELEDDFM 212
           E+RSY GLMVSE MTSNKQIA+ANKSLQELE+DFM
Sbjct: 181 EMRSYKGLMVSENMTSNKQIASANKSLQELEEDFM 215

[Close]

BLAST of Carg25624 vs. TrEMBL
Match: tr|A0A2C9U972|A0A2C9U972_MANES (Uncharacterized protein OS=Manihot esculenta OX=3983 GN=MANES_16G065900 PE=4 SV=1)

HSP 1 Score: 349.0 bits (894), Expect = 7.6e-93
Identity = 177/215 (82.33%), Postives = 188/215 (87.44%), Query Frame = 0


Query: 1   MVFYFKARPDVGDYTIFMGLDKHENEELIKYGFPEDIWFHVDKMSSAHVYVRLRRGQTID 60
           MVFYFKARP+VGDYTIFMGLDK+ENEELIKYGFPEDIWFHVDKMSSAHVY+RL +GQTID
Sbjct: 1   MVFYFKARPEVGDYTIFMGLDKYENEELIKYGFPEDIWFHVDKMSSAHVYLRLHKGQTID 60

Query: 61  DISEGLLEDCVQLVKANSIQGNKVNNIDVVYTPWANLKKTASMDVGQVGFHNPKMVRTVR 120
           DISEGLLEDC QLVKANSIQGNKVNNIDVVYTPW+NLKKTASMDVGQVGFHNPKMVRTVR
Sbjct: 61  DISEGLLEDCAQLVKANSIQGNKVNNIDVVYTPWSNLKKTASMDVGQVGFHNPKMVRTVR 120

Query: 121 VEKRINDIVNRLNRTKVERKPDLK----AVNAAERAERXXXXXXXXXXXXXXXXXXXRQA 180
           VEKRIN+IVNRLNRTKVER+PDLK    A++AAERAER                   RQA
Sbjct: 121 VEKRINEIVNRLNRTKVERRPDLKAEKEAIHAAERAERKLQLRDKKRREEVERLEKERQA 180

Query: 181 ELRSYSGLMVSEKMTSNKQIAAANKSLQELEDDFM 212
           E+RSY GLMVSEKMTSNKQIAA NKSLQELE+DFM
Sbjct: 181 EIRSYKGLMVSEKMTSNKQIAAENKSLQELEEDFM 215

[Close]

BLAST of Carg25624 vs. TrEMBL
Match: tr|A0A2R6QVK9|A0A2R6QVK9_ACTCH (Coiled-coil domain-containing protein OS=Actinidia chinensis var. chinensis OX=1590841 GN=CEY00_Acc13283 PE=4 SV=1)

HSP 1 Score: 348.6 bits (893), Expect = 9.9e-93
Identity = 177/215 (82.33%), Postives = 185/215 (86.05%), Query Frame = 0


Query: 1   MVFYFKARPDVGDYTIFMGLDKHENEELIKYGFPEDIWFHVDKMSSAHVYVRLRRGQTID 60
           MVFYFKARP+ GDYTIFMGLDKHENEELIKYGFPEDIWFHVDKMSSAHVYVRL RGQTID
Sbjct: 1   MVFYFKARPEAGDYTIFMGLDKHENEELIKYGFPEDIWFHVDKMSSAHVYVRLHRGQTID 60

Query: 61  DISEGLLEDCVQLVKANSIQGNKVNNIDVVYTPWANLKKTASMDVGQVGFHNPKMVRTVR 120
           DISEGLLEDC QLVKANSIQGNKVNN+DVVYTPW NLKKTASMDVGQVGFHNPKMVRTVR
Sbjct: 61  DISEGLLEDCAQLVKANSIQGNKVNNVDVVYTPWQNLKKTASMDVGQVGFHNPKMVRTVR 120

Query: 121 VEKRINDIVNRLNRTKVERKPDLK----AVNAAERAERXXXXXXXXXXXXXXXXXXXRQA 180
           VEKRIN+IVNRLNRTKVERKPDLK    AVNAAERAER                   RQA
Sbjct: 121 VEKRINEIVNRLNRTKVERKPDLKAEREAVNAAERAERKLHLRDKKRREEMERLEKERQA 180

Query: 181 ELRSYSGLMVSEKMTSNKQIAAANKSLQELEDDFM 212
           E+RSY  LMV++KMTSNK IA+ANKSLQELE+DFM
Sbjct: 181 EIRSYKNLMVADKMTSNKDIASANKSLQELEEDFM 215

The following BLAST results are available for this feature:

BLAST of Carg25624 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022941472.1	3.7e-99	93.95	coiled-coil domain-containing protein 25 [Cucurbita moschata]	[more]
XP_023524375.1	3.1e-98	93.49	coiled-coil domain-containing protein 25-like [Cucurbita pepo subsp. pepo]	[more]
XP_022982049.1	9.1e-98	93.02	coiled-coil domain-containing protein 25 [Cucurbita maxima]	[more]
XP_022139971.1	2.5e-95	85.58	coiled-coil domain-containing protein 25 [Momordica charantia]	[more]
XP_004136294.1	3.6e-94	90.70	PREDICTED: coiled-coil domain-containing protein 25 [Cucumis sativus] >KGN60206....	[more]

BLAST of Carg25624 vs. TAIR10


Match Name	E-value	Identity	Description
AT5G11500.1	4.1e-92	78.60	unknown protein	[more]

BLAST of Carg25624 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|Q7T312\|CCD25_DANRE	1.8e-52	67.59	Coiled-coil domain-containing protein 25 OS=Danio rerio OX=7955 GN=ccdc25 PE=1 S...	[more]
sp\|Q3SZX8\|CCD25_BOVIN	1.1e-51	62.31	Coiled-coil domain-containing protein 25 OS=Bos taurus OX=9913 GN=CCDC25 PE=2 SV...	[more]
sp\|Q86WR0\|CCD25_HUMAN	1.9e-51	63.46	Coiled-coil domain-containing protein 25 OS=Homo sapiens OX=9606 GN=CCDC25 PE=1 ...	[more]
sp\|Q78PG9\|CCD25_MOUSE	1.9e-51	65.07	Coiled-coil domain-containing protein 25 OS=Mus musculus OX=10090 GN=Ccdc25 PE=1...	[more]
sp\|Q5R9S1\|CCD25_PONAB	1.9e-51	63.46	Coiled-coil domain-containing protein 25 OS=Pongo abelii OX=9601 GN=CCDC25 PE=2 ...	[more]

BLAST of Carg25624 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A0A0LJJ0\|A0A0A0LJJ0_CUCSA	2.4e-94	90.70	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G889140 PE=4 SV=1	[more]
tr\|A0A2P5DTC1\|A0A2P5DTC1_PARAD	8.9e-94	83.72	Coiled-coil domain-containing protein OS=Parasponia andersonii OX=3476 GN=PanWU0...	[more]
tr\|A0A2P5G1J6\|A0A2P5G1J6_9ROSA	4.4e-93	89.30	Coiled-coil domain-containing protein OS=Trema orientalis OX=63057 GN=TorRG33x02...	[more]
tr\|A0A2C9U972\|A0A2C9U972_MANES	7.6e-93	82.33	Uncharacterized protein OS=Manihot esculenta OX=3983 GN=MANES_16G065900 PE=4 SV=...	[more]
tr\|A0A2R6QVK9\|A0A2R6QVK9_ACTCH	9.9e-93	82.33	Coiled-coil domain-containing protein OS=Actinidia chinensis var. chinensis OX=1...	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR008532	DUF814

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg25624-RA	Carg25624-RA	mRNA

InterPro

Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 155..175
None	No IPR available	COILS	Coil	Coil	coord: 189..209
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 147..174
None	No IPR available	PANTHER	PTHR13049:SF3	SUBFAMILY NOT NAMED	coord: 1..211
None	No IPR available	PANTHER	PTHR13049	DUF814-RELATED	coord: 1..211
IPR008532	Domain of unknown function DUF814	PFAM	PF05670	DUF814	coord: 12..99 e-value: 3.4E-23 score: 81.4

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Carg25624	Cla023006	Watermelon (97103) v1	carwmB1009
Carg25624	Csa3G889140	Cucumber (Chinese Long) v2	carcuB1023
Carg25624	MELO3C003579	Melon (DHL92) v3.5.1	carmeB0982
Carg25624	ClCG11G014050	Watermelon (Charleston Gray)	carwcgB0983
Carg25624	CSPI03G45020	Wild cucumber (PI 183967)	carcpiB1047
Carg25624	Cucsa.311410	Cucumber (Gy14) v1	carcgyB1126
Carg25624	CmaCh01G016000	Cucurbita maxima (Rimu)	carcmaB1401
Carg25624	CmaCh09G005530	Cucurbita maxima (Rimu)	carcmaB1400
Carg25624	CmoCh01G016470	Cucurbita moschata (Rifu)	carcmoB1357
Carg25624	CmoCh09G005430	Cucurbita moschata (Rifu)	carcmoB1356
Carg25624	Lsi04G022280	Bottle gourd (USVL1VR-Ls)	carlsiB922
Carg25624	Cp4.1LG02g04870	Cucurbita pepo (Zucchini)	carcpeB1405
Carg25624	Cp4.1LG06g04520	Cucurbita pepo (Zucchini)	carcpeB1406
Carg25624	CsGy3G042500	Cucumber (Gy14) v2	carcgybB0995
Carg25624	MELO3C003579.2	Melon (DHL92) v3.6.1	carmedB0992
Carg25624	CsaV3_3G047450	Cucumber (Chinese Long) v3	carcucB1053
Carg25624	Cla97C11G220030	Watermelon (97103) v2	carwmbB1066
Carg25624	Bhi09G002055	Wax gourd	carwgoB1186

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
Carg25624	Carg02967	Silver-seed gourd	carcarB559

The following block(s) are covering this gene:

None