Carg25521 (gene) Silver-seed gourd | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Carg25521
Type	gene
Organism	Cucurbita argyrosperma (Silver-seed gourd)
Description	SAM domain protein
Location	Cucurbita_argyrosperma_scaffold_302 : 4479 .. 6613 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTATGCTGATCGATTGGAGACCGAGACCCATAGGTCGATAAAGGACCGCCTCAATGGAAACTCTTCCGACCTTTCTGCTCGCCGGCGGCCGATTACTGGGAAGAGGTTCGTCGTCTTTTTTTGTTTTTCCACCATTGTTTGGGGTTTTGGGATTTTTTTGAAATGTGGGAAGTAATTGTTTTTAGGAATTTGTACTGTTATTCGTAAGTTTTAGTACAATGGTGGAATTTAGGGCTAACATACTTCCGTAGTATTTTTCGCTGTAGTTGAACTTGCTGGTTTTTTGCGATTTTACTTGAAGAGTGAAGGTGTTGCTACTTTTGGTTGTAACTTCGCGGTTCTTCTCGTTCGAGTTGTTTTTGGAACCTTGTAGATTTGTATGTCTTTTAAGCTCCTTGAGCTGTTGCAGCTTCCATGGAATGCATGAGGATTGTTTGGTCACATTAGGTCGATTCAGAGTAATGGTTTCCGCCAGAGCAGTCGGACGGACTTCTGCTAGCAGTAATATAAGTGAATGAATCCCATCCCCTATCAAGTTCAGTGCTTACGCCCTTTTAGAGATAGGGAGAGAGGCGAGCAAAAGAGCTCATTCTTTCATTTTGTGATCTTTAGATTCATAAGATCATGATAGAGTCCTCTTTACTTGATATTAAATTCTTAAAGCTCCCGCCGCCCTACAACTAGTGTAGTATAGCAGAGCTGCTCAAAGCTGGCTTGATTATTAGAGAAATGGTGCTCGTGTTATTTTTGGCTTCATGATTTTGTGCAGTGCCAAGATTATGCTAAAGATTTGTGACACATTCGTTATATAGATTCAAAGTGTAATTGGGATTTACCATTGCCGAAAACTTACTGGGTCGATTCGTGCTAGCATATTTTAGAATAGGGATATGGCTTTTATGCTTATTTTGGTGTGAGTGGCTGAGTTAGCTTGGTTTGAGGATCTACATGCTATTATTTGTTGAGTTGTTCTGATTTCATTATATTTTGTCCATACCATATGCATTTCAGGCAGAGAGAAGATGACAAGTGGGAGCATGATCTCTATGAGAATGATAAGCCGCAAACTTCAAGTACGAATTGAGTGTAATTGTATCACTCATCTAAAACCCATCTTTTGTTAGATGATTCTAATTCACTTTATAAGTTTTTGACTATGTTCTATTGGCTTTCAAGACCGCAAAGTCGATACTCGAGATCTCCGCTTGAAGCTCCAAAAGAAAAGTCAGCAACAAAGTGGAACTGCATCATTTTCAGGAGTGCGGGACCTACGTGAAAAGTTATCTGGCACAATGAAGCCACAAGCTGCAAATAATGATCCATCGAAACTAAAATTGGATGTTACAAAAACATCCCGAAAAAGGGATACTGTCGAAACTCGTCCTTCAACCACTCAAAAAGTTGTAGCCAACCCTGCTACTAGGAAAAAGGCTACTCAAAAGGCAAGAAACTTGCATTAGTTTTTATGTCATTTTTGTTTAGATTAGAAAATATATATTCTGTCAAACACATGATGGAGGTTAGGTTTGTCACCTTTTCTGAGAAACTAATTTATTTTGCTCGTTGACATTGGTCGGGAGGACTTCTGGAAGTTATTTGTTTAAGTACACCCTTTTCTTTTACTTTTTTGCTTCGTTGGCTTCTGAATTCTCTCGGAGCGCCTTGGTTAGGCCAGGGTATTCAAATTAGTGCATCTGGTATAGTCTTTGTCTTGCTACTTTGCTAATGAACTGAAGAGACTTCCTATCTGTAGGCCAAATGCATGTTATTCTTGACTCGTAGTAATCAAACTTGGAATAGCCAACCTTACGTTGCAGCCGAGTAACCATGTGAACTATTGAAAATTAGATGTTTTGTTTTTAAATTTTCTTTTCTTGACGAACACGAGTCTTGATGCAGGGTGATACATCAGTGGATGACTTCCTACAGTCCTTGGGCCTTGAAAAATATTCCATTACGTTTCAAGCAGAGGAAGTATGAAAATCTTATGTTTCGAGTATAAAATCCATTTTTGAAGATTTCAGCCAGACTTCCCTGAACTAATTACAACTTTGAACCTCTTCCATATAGGTTGATATGACGGCGCTTGTACACATGGGAGATGAAGATCTCAAGGCTTTAGGAGTGCCAATG

mRNA sequence

ATGTATGCTGATCGATTGGAGACCGAGACCCATAGGTCGATAAAGGACCGCCTCAATGGAAACTCTTCCGACCTTTCTGCTCGCCGGCGGCCGATTACTGGGAAGAGGCAGAGAGAAGATGACAAGTGGGAGCATGATCTCTATGAGAATGATAAGCCGCAAACTTCAAACCGCAAAGTCGATACTCGAGATCTCCGCTTGAAGCTCCAAAAGAAAAGTCAGCAACAAAGTGGAACTGCATCATTTTCAGGAGTGCGGGACCTACGTGAAAAGTTATCTGGCACAATGAAGCCACAAGCTGCAAATAATGATCCATCGAAACTAAAATTGGATGTTACAAAAACATCCCGAAAAAGGGATACTGTCGAAACTCGTCCTTCAACCACTCAAAAAGGTGATACATCAGTGGATGACTTCCTACAGTCCTTGGGCCTTGAAAAATATTCCATTACGTTTCAAGCAGAGGAAGTTGATATGACGGCGCTTGTACACATGGGAGATGAAGATCTCAAGGCTTTAGGAGTGCCAATG

Coding sequence (CDS)

ATGTATGCTGATCGATTGGAGACCGAGACCCATAGGTCGATAAAGGACCGCCTCAATGGAAACTCTTCCGACCTTTCTGCTCGCCGGCGGCCGATTACTGGGAAGAGGCAGAGAGAAGATGACAAGTGGGAGCATGATCTCTATGAGAATGATAAGCCGCAAACTTCAAACCGCAAAGTCGATACTCGAGATCTCCGCTTGAAGCTCCAAAAGAAAAGTCAGCAACAAAGTGGAACTGCATCATTTTCAGGAGTGCGGGACCTACGTGAAAAGTTATCTGGCACAATGAAGCCACAAGCTGCAAATAATGATCCATCGAAACTAAAATTGGATGTTACAAAAACATCCCGAAAAAGGGATACTGTCGAAACTCGTCCTTCAACCACTCAAAAAGGTGATACATCAGTGGATGACTTCCTACAGTCCTTGGGCCTTGAAAAATATTCCATTACGTTTCAAGCAGAGGAAGTTGATATGACGGCGCTTGTACACATGGGAGATGAAGATCTCAAGGCTTTAGGAGTGCCAATG

Protein sequence

MYADRLETETHRSIKDRLNGNSSDLSARRRPITGKRQREDDKWEHDLYENDKPQTSNRKVDTRDLRLKLQKKSQQQSGTASFSGVRDLREKLSGTMKPQAANNDPSKLKLDVTKTSRKRDTVETRPSTTQKGDTSVDDFLQSLGLEKYSITFQAEEVDMTALVHMGDEDLKALGVPM

Homology

[Close]

BLAST of Carg25521 vs. NCBI nr
Match: XP_022953347.1 (ankyrin repeat and SAM domain-containing protein 6-like [Cucurbita moschata])

HSP 1 Score: 323.6 bits (828), Expect = 4.3e-85
Identity = 173/191 (90.58%), Postives = 175/191 (91.62%), Query Frame = 0


Query: 1   MYADRLETETHRSIKDRLNGNSSDLSARRRPITGKRQREDDKWEHDLYENDKPQTSNRKV 60
           MYADRLETETHRSIKDRLNGNSSDLS+RRRPITGKRQREDDKWEHDLYENDKPQTSN KV
Sbjct: 1   MYADRLETETHRSIKDRLNGNSSDLSSRRRPITGKRQREDDKWEHDLYENDKPQTSNHKV 60

Query: 61  DTRDLRLKLQKKSQQQSGTASFSGVRDLREKLSGTMKPQAANNDPSKLKLDVTKTSRKRD 120
           D RDLRLKLQKKSQQQSGTASFSGVRDLREKLSGTMKPQAANNDPSKLKL+VTKTSRKRD
Sbjct: 61  DARDLRLKLQKKSQQQSGTASFSGVRDLREKLSGTMKPQAANNDPSKLKLEVTKTSRKRD 120

Query: 121 TVETRPST--------------TQKGDTSVDDFLQSLGLEKYSITFQAEEVDMTALVHMG 178
           TVETRPST              TQKGDTSVDDFLQSLGLEKYSITFQAEEVDMTALVHMG
Sbjct: 121 TVETRPSTTQKVVANPATRKKATQKGDTSVDDFLQSLGLEKYSITFQAEEVDMTALVHMG 180

[Close]

BLAST of Carg25521 vs. NCBI nr
Match: XP_023547437.1 (ankyrin repeat and SAM domain-containing protein 6-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 323.2 bits (827), Expect = 5.6e-85
Identity = 173/191 (90.58%), Postives = 175/191 (91.62%), Query Frame = 0


Query: 1   MYADRLETETHRSIKDRLNGNSSDLSARRRPITGKRQREDDKWEHDLYENDKPQTSNRKV 60
           MYADRLETETHRSIKDRLNGNSSDLSARRRPITGKR+REDDKWEHDLYENDKPQTSNRKV
Sbjct: 1   MYADRLETETHRSIKDRLNGNSSDLSARRRPITGKRRREDDKWEHDLYENDKPQTSNRKV 60

Query: 61  DTRDLRLKLQKKSQQQSGTASFSGVRDLREKLSGTMKPQAANNDPSKLKLDVTKTSRKRD 120
           D RDLRLKLQKKSQQQSG ASFSGVRDLREKLSGTMKPQAANNDPSKLKL+VTKTSRKRD
Sbjct: 61  DARDLRLKLQKKSQQQSGAASFSGVRDLREKLSGTMKPQAANNDPSKLKLEVTKTSRKRD 120

Query: 121 TVETRPST--------------TQKGDTSVDDFLQSLGLEKYSITFQAEEVDMTALVHMG 178
           TVETRPST              TQKGDTSVDDFLQSLGLEKYSITFQAEEVDMTALVHMG
Sbjct: 121 TVETRPSTTQKVVANPATRKRATQKGDTSVDDFLQSLGLEKYSITFQAEEVDMTALVHMG 180

[Close]

BLAST of Carg25521 vs. NCBI nr
Match: XP_022991214.1 (ankyrin repeat and SAM domain-containing protein 6-like [Cucurbita maxima])

HSP 1 Score: 314.3 bits (804), Expect = 2.6e-82
Identity = 169/191 (88.48%), Postives = 172/191 (90.05%), Query Frame = 0


Query: 1   MYADRLETETHRSIKDRLNGNSSDLSARRRPITGKRQREDDKWEHDLYENDKPQTSNRKV 60
           MYADRLETETHRSIKDRLNG+SSDLS RRRPITGKRQREDDKWEHDLY NDKPQTSNRKV
Sbjct: 1   MYADRLETETHRSIKDRLNGSSSDLSTRRRPITGKRQREDDKWEHDLYVNDKPQTSNRKV 60

Query: 61  DTRDLRLKLQKKSQQQSGTASFSGVRDLREKLSGTMKPQAANNDPSKLKLDVTKTSRKRD 120
           D RDLRLKLQKKSQQQSGTASFSGVRDLREKLSGTMKPQAANNDPSKLKL+VTKTSRKRD
Sbjct: 61  DARDLRLKLQKKSQQQSGTASFSGVRDLREKLSGTMKPQAANNDPSKLKLEVTKTSRKRD 120

Query: 121 TVETRPST--------------TQKGDTSVDDFLQSLGLEKYSITFQAEEVDMTALVHMG 178
           TVET PST              TQK DTSV+DFLQSLGLEKYSITFQAEEVDMTALVHMG
Sbjct: 121 TVETHPSTTQKVVGNPATRKKATQKSDTSVNDFLQSLGLEKYSITFQAEEVDMTALVHMG 180

[Close]

BLAST of Carg25521 vs. NCBI nr
Match: XP_022960459.1 (ankyrin repeat and SAM domain-containing protein 6-like [Cucurbita moschata])

HSP 1 Score: 293.1 bits (749), Expect = 6.3e-76
Identity = 155/191 (81.15%), Postives = 166/191 (86.91%), Query Frame = 0


Query: 1   MYADRLETETHRSIKDRLNGNSSDLSARRRPITGKRQREDDKWEHDLYENDKPQTSNRKV 60
           MYADRL+ +THRSIKDRLNGNSSDLSARRRPITGKRQR+DDKWEHDLYEND+PQTSNRKV
Sbjct: 1   MYADRLDADTHRSIKDRLNGNSSDLSARRRPITGKRQRQDDKWEHDLYENDEPQTSNRKV 60

Query: 61  DTRDLRLKLQKKSQQQSGTASFSGVRDLREKLSGTMKPQAANNDPSKLKLDVTKTSRKRD 120
             RDLRLKLQK+SQQQSG +SFSG+RDLREKLSGTMKPQA N+DP K KLDV+K +RK D
Sbjct: 61  GARDLRLKLQKRSQQQSGNSSFSGIRDLREKLSGTMKPQAVNSDPPKPKLDVSKPTRKND 120

Query: 121 TVETRPSTT--------------QKGDTSVDDFLQSLGLEKYSITFQAEEVDMTALVHMG 178
           +VE RPSTT              QK DTSVDDFLQSLGLEKYSITFQAEEVDMTALVHMG
Sbjct: 121 SVEARPSTTQKXXXXXXXXKKAAQKSDTSVDDFLQSLGLEKYSITFQAEEVDMTALVHMG 180

[Close]

BLAST of Carg25521 vs. NCBI nr
Match: XP_023513941.1 (ankyrin repeat and SAM domain-containing protein 6 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 290.8 bits (743), Expect = 3.1e-75
Identity = 155/191 (81.15%), Postives = 165/191 (86.39%), Query Frame = 0


Query: 1   MYADRLETETHRSIKDRLNGNSSDLSARRRPITGKRQREDDKWEHDLYENDKPQTSNRKV 60
           MYADRL+ +THRSIKDRLNGNSSDLSARRRPITGKRQR+DDKWEHDLYEND+PQTSNRKV
Sbjct: 1   MYADRLDADTHRSIKDRLNGNSSDLSARRRPITGKRQRQDDKWEHDLYENDEPQTSNRKV 60

Query: 61  DTRDLRLKLQKKSQQQSGTASFSGVRDLREKLSGTMKPQAANNDPSKLKLDVTKTSRKRD 120
             RDLRLKLQK+SQQQSG +SFSGVRDLREKLSGTMKPQA N+DP K KLD +K +RK D
Sbjct: 61  GARDLRLKLQKRSQQQSGNSSFSGVRDLREKLSGTMKPQAVNSDPPKPKLDGSKPTRKND 120

Query: 121 TVETRPSTT--------------QKGDTSVDDFLQSLGLEKYSITFQAEEVDMTALVHMG 178
           +VE RPSTT              QK DTSVDDFLQSLGLEKYSITFQAEEVDMTALVHMG
Sbjct: 121 SVEARPSTTQKVVANPATRKKASQKSDTSVDDFLQSLGLEKYSITFQAEEVDMTALVHMG 180

[Close]

BLAST of Carg25521 vs. TAIR10
Match: AT3G07170.1 (Sterile alpha motif (SAM) domain-containing protein)

HSP 1 Score: 193.4 bits (490), Expect = 1.2e-49
Identity = 108/189 (57.14%), Postives = 133/189 (70.37%), Query Frame = 0


Query: 1   MYADRLETE--THRSIKDRLNGNSSDLSARRRPITGKRQREDDKWEHDLYENDKPQTSNR 60
           MYAD+LE E  + + +KDR+NG S D+S R R +TGKRQR+DDKWEHDL+ +DKPQ SNR
Sbjct: 1   MYADKLEAESGSRKVVKDRINGGSGDISTRVRQVTGKRQRQDDKWEHDLFSSDKPQLSNR 60

Query: 61  KVDTRDLRLKLQKKSQ-QQSGTASFSGVRDLREKLSGTMKPQAANNDPSKLKLDVTKTSR 120
           +VD RDLRLKLQK+    QSG  + SGVRDLR++LSGTM  Q  N+DP K K +  + S 
Sbjct: 61  RVDPRDLRLKLQKRHHGSQSGREAGSGVRDLRDQLSGTMNQQPKNSDPPKSKAEAARPSM 120

Query: 121 KRDTVETRPSTT---------QKGDTSVDDFLQSLGLEKYSITFQAEEVDMTALVHMGDE 178
           K    ET    T         Q+ D+SVD FL+SLGLEKYS  FQ EEVDM AL+HM D+
Sbjct: 121 KSVATETETRKTSSQATRKKSQQADSSVDSFLESLGLEKYSTAFQVEEVDMDALMHMTDD 180

[Close]

BLAST of Carg25521 vs. TAIR10
Match: AT5G48680.1 (Sterile alpha motif (SAM) domain-containing protein)

HSP 1 Score: 143.3 bits (360), Expect = 1.5e-34
Identity = 97/196 (49.49%), Postives = 127/196 (64.80%), Query Frame = 0


Query: 1   MYADRL--ETETHRSIKDRLNGNSSDLSAR--RRPITGKRQR-EDDKWEHDLYE-NDKPQ 60
           MY+D +  ET+  ++ K+RLNG S D S+R  ++ +T KR R +DDKWEHDL+E +D+P+
Sbjct: 1   MYSDLVVAETKISKTFKNRLNGGSGDFSSRGKQQQVTRKRGRQDDDKWEHDLFEDDDEPR 60

Query: 61  TSNRKVDTRDLRLKLQKKSQ-QQSGTASFS-GVRDLREKLSGTMKPQAANNDPSKLKLDV 120
            S R+VD +DLRLKLQKK    Q G   FS  V DLR+KLS T+ PQ  N+     K + 
Sbjct: 61  LSKRRVDPKDLRLKLQKKRHGSQIGGRVFSVSVADLRDKLSRTVNPQTKNS-----KREA 120

Query: 121 TKTSRKRDTVETRPST-----------TQKGDTSVDDFLQSLGLEKYSITFQAEEVDMTA 178
            + + K+ +V T+P T            Q+ D SVD FL+SLGLEKYS  FQ EEVDM A
Sbjct: 121 VRPAIKKVSVGTKPETRAAPNRATKKDPQQNDASVDSFLESLGLEKYSTAFQVEEVDMDA 180

[Close]

BLAST of Carg25521 vs. TAIR10
Match: AT1G70180.2 (Sterile alpha motif (SAM) domain-containing protein)

HSP 1 Score: 43.9 bits (102), Expect = 1.2e-04
Identity = 20/36 (55.56%), Postives = 26/36 (72.22%), Query Frame = 0


Query: 142 SLGLEKYSITFQAEEVDMTALVHMGDEDLKALGVPM 178
           S+GL KYS+ F+ EEVDMT +  M + DLK L +PM
Sbjct: 409 SIGLGKYSLAFKREEVDMTTIKQMKESDLKDLIIPM 444

[Close]

BLAST of Carg25521 vs. TrEMBL
Match: tr|A0A1S3C7G6|A0A1S3C7G6_CUCME (ankyrin repeat and SAM domain-containing protein 6 OS=Cucumis melo OX=3656 GN=LOC103497565 PE=4 SV=1)

HSP 1 Score: 288.9 bits (738), Expect = 7.8e-75
Identity = 154/191 (80.63%), Postives = 161/191 (84.29%), Query Frame = 0


Query: 1   MYADRLETETHRSIKDRLNGNSSDLSARRRPITGKRQREDDKWEHDLYENDKPQTSNRKV 60
           MYADRLE + HRSIKDRLNGNSSDLSARRRPITGKRQR+DDKWEHDLYEND+PQTSNR+V
Sbjct: 1   MYADRLEADNHRSIKDRLNGNSSDLSARRRPITGKRQRQDDKWEHDLYENDEPQTSNRRV 60

Query: 61  DTRDLRLKLQKKSQQQSGTASFSGVRDLREKLSGTMKPQAANNDPSKLKLDVTKTSRKRD 120
             RDLRLKLQKKSQQQSG A FSGVRDLREKLSGTMKPQAA NDP K KL+VTK  RK D
Sbjct: 61  GARDLRLKLQKKSQQQSGNAPFSGVRDLREKLSGTMKPQAAKNDPPKPKLEVTKAPRKND 120

Query: 121 TVETRPSTT--------------QKGDTSVDDFLQSLGLEKYSITFQAEEVDMTALVHMG 178
            +E  PSTT              QK DTSVDDFLQSLGLEKYSITFQAEEVDMTALVHMG
Sbjct: 121 AIEAHPSTTQKAVAKSATRKNAAQKSDTSVDDFLQSLGLEKYSITFQAEEVDMTALVHMG 180

[Close]

BLAST of Carg25521 vs. TrEMBL
Match: tr|A0A0A0K9W5|A0A0A0K9W5_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G341210 PE=4 SV=1)

HSP 1 Score: 287.7 bits (735), Expect = 1.7e-74
Identity = 154/191 (80.63%), Postives = 160/191 (83.77%), Query Frame = 0


Query: 1   MYADRLETETHRSIKDRLNGNSSDLSARRRPITGKRQREDDKWEHDLYENDKPQTSNRKV 60
           MYADRLE + HRSIKDRLNGNSSDLSARRRPITGKRQREDDKWEHDLYEND+PQTSNR+V
Sbjct: 1   MYADRLEADNHRSIKDRLNGNSSDLSARRRPITGKRQREDDKWEHDLYENDEPQTSNRRV 60

Query: 61  DTRDLRLKLQKKSQQQSGTASFSGVRDLREKLSGTMKPQAANNDPSKLKLDVTKTSRKRD 120
             RDLRLKLQKKSQQQSG A FSGVRDLREKLSGTMKPQAANNDP K KL+VTK  RK D
Sbjct: 61  GARDLRLKLQKKSQQQSGNAPFSGVRDLREKLSGTMKPQAANNDPPKPKLEVTKAPRKND 120

Query: 121 TVE--------------TRPSTTQKGDTSVDDFLQSLGLEKYSITFQAEEVDMTALVHMG 178
            +E              TR    QK DTSVDDFLQSLGLEKYSITFQAEEVDMTALVHMG
Sbjct: 121 AIEAHTSSTQKAVAKSATRKKAAQKSDTSVDDFLQSLGLEKYSITFQAEEVDMTALVHMG 180

[Close]

BLAST of Carg25521 vs. TrEMBL
Match: tr|W9RW23|W9RW23_9ROSA (Uncharacterized protein OS=Morus notabilis OX=981085 GN=L484_007030 PE=4 SV=1)

HSP 1 Score: 229.2 bits (583), Expect = 7.3e-57
Identity = 124/179 (69.27%), Postives = 142/179 (79.33%), Query Frame = 0


Query: 1   MYADRLETETHRSIKDRLNGNSSDLSARRRPITGKRQREDDKWEHDLYENDKPQTSNRKV 60
           MYADR+E ET RSIKDRLNGN  D S+RRR ITGKRQR+DDKWEHDLY++ +PQ SN KV
Sbjct: 1   MYADRVEAETRRSIKDRLNGNFRDDSSRRRQITGKRQRQDDKWEHDLYQDGEPQVSNHKV 60

Query: 61  DTRDLRLKLQKKSQQ--QSGTASFSGVRDLREKLSGTMKPQAANNDPSKLKLDVTKTSRK 120
           D RDLRLKLQ+KSQQ  +SG  S SGVRDLREKLSGTM PQ  N DP K   + +K +RK
Sbjct: 61  DARDLRLKLQRKSQQASESGRGSQSGVRDLREKLSGTMHPQPMNYDPPKPTPEASKPARK 120

Query: 121 RDTVETRPSTTQKGDTSVDDFLQSLGLEKYSITFQAEEVDMTALVHMGDEDLKALGVPM 178
              V+     ++K  ++VDDFLQSLGLEKYSITFQAEEVDMTAL HM DEDLKA+G+PM
Sbjct: 121 SVAVQASTLESKKASSTVDDFLQSLGLEKYSITFQAEEVDMTALAHMTDEDLKAIGIPM 179

[Close]

BLAST of Carg25521 vs. TrEMBL
Match: tr|M5VLG2|M5VLG2_PRUPE (Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_8G200300 PE=4 SV=1)

HSP 1 Score: 222.2 bits (565), Expect = 9.0e-55
Identity = 127/193 (65.80%), Postives = 139/193 (72.02%), Query Frame = 0


Query: 1   MYADRLETETHRSIKDRLNGNSSDLSARRRPITGKRQREDDKWEHDLYENDKPQTSNRKV 60
           MYADR E +T RSIKDRLNG+  D S RRR I GKRQR+DDKWEHDLYE++ PQ SNRKV
Sbjct: 1   MYADREEADTKRSIKDRLNGSFRDNSGRRRQIAGKRQRQDDKWEHDLYEDNDPQVSNRKV 60

Query: 61  DTRDLRLKLQKKS---QQQSGTASFSGVRDLREKLSGTMKPQAANNDPSKLKLDVTKTSR 120
           D RDLRLKLQ+KS     QSGT S SGVRDLREKLSGTM PQ  N DP K KL+  K  R
Sbjct: 61  DARDLRLKLQRKSFKQSSQSGTRSLSGVRDLREKLSGTMVPQPVNADPPKTKLEAAKPVR 120

Query: 121 KRDTV-------------ETRPSTTQKGDTSVDDFLQSLGLEKYSITFQAEEVDMTALVH 178
           +   V              +R  T+QK   SVD+FL SL LEKYSITFQAEEVDMTALVH
Sbjct: 121 RSTAVGASAQETKKVTNPASRKKTSQKAGASVDEFLTSLDLEKYSITFQAEEVDMTALVH 180

[Close]

BLAST of Carg25521 vs. TrEMBL
Match: tr|A0A061DV46|A0A061DV46_THECC (Sterile alpha motif domain-containing protein isoform 1 OS=Theobroma cacao OX=3641 GN=TCM_002879 PE=4 SV=1)

HSP 1 Score: 221.9 bits (564), Expect = 1.2e-54
Identity = 126/193 (65.28%), Postives = 141/193 (73.06%), Query Frame = 0


Query: 1   MYADRLETETHRSIKDRLNGNSSDLSARRRPITGKRQREDDKWEHDLYENDKPQTSNRKV 60
           MYADR+E    RS+K+RLNGNS+D S RR  ITGKR REDDKWEHDLY++D PQ SNRKV
Sbjct: 1   MYADRVEAVGKRSVKERLNGNSADNSIRRHQITGKRLREDDKWEHDLYQDDLPQVSNRKV 60

Query: 61  DTRDLRLKLQKKSQQ---QSGTASFSGVRDLREKLSGTMKPQAANNDPSKLKLDVTKTSR 120
           D RDLRLKLQ+KS Q   QSG  +FSGVRDLREKLSGTM  Q  N DP K K++  K +R
Sbjct: 61  DARDLRLKLQRKSLQQVSQSGRGAFSGVRDLREKLSGTMNTQPLNVDPPKPKVETAKPAR 120

Query: 121 KRDTVET-------------RPSTTQKGDTSVDDFLQSLGLEKYSITFQAEEVDMTALVH 178
           K   VET             R    QK DTSV+ FLQSLG+EKY+I FQAEEVDMTALVH
Sbjct: 121 KSVAVETSEPEPKRAANMAARKKVQQKADTSVEGFLQSLGIEKYTILFQAEEVDMTALVH 180

The following BLAST results are available for this feature:

BLAST of Carg25521 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022953347.1	4.3e-85	90.58	ankyrin repeat and SAM domain-containing protein 6-like [Cucurbita moschata]	[more]
XP_023547437.1	5.6e-85	90.58	ankyrin repeat and SAM domain-containing protein 6-like [Cucurbita pepo subsp. p...	[more]
XP_022991214.1	2.6e-82	88.48	ankyrin repeat and SAM domain-containing protein 6-like [Cucurbita maxima]	[more]
XP_022960459.1	6.3e-76	81.15	ankyrin repeat and SAM domain-containing protein 6-like [Cucurbita moschata]	[more]
XP_023513941.1	3.1e-75	81.15	ankyrin repeat and SAM domain-containing protein 6 [Cucurbita pepo subsp. pepo]	[more]

BLAST of Carg25521 vs. TAIR10


Match Name	E-value	Identity	Description
AT3G07170.1	1.2e-49	57.14	Sterile alpha motif (SAM) domain-containing protein	[more]
AT5G48680.1	1.5e-34	49.49	Sterile alpha motif (SAM) domain-containing protein	[more]
AT1G70180.2	1.2e-04	55.56	Sterile alpha motif (SAM) domain-containing protein	[more]

BLAST of Carg25521 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of Carg25521 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A1S3C7G6\|A0A1S3C7G6_CUCME	7.8e-75	80.63	ankyrin repeat and SAM domain-containing protein 6 OS=Cucumis melo OX=3656 GN=LO...	[more]
tr\|A0A0A0K9W5\|A0A0A0K9W5_CUCSA	1.7e-74	80.63	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G341210 PE=4 SV=1	[more]
tr\|W9RW23\|W9RW23_9ROSA	7.3e-57	69.27	Uncharacterized protein OS=Morus notabilis OX=981085 GN=L484_007030 PE=4 SV=1	[more]
tr\|M5VLG2\|M5VLG2_PRUPE	9.0e-55	65.80	Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_8G200300 PE=4 SV=1	[more]
tr\|A0A061DV46\|A0A061DV46_THECC	1.2e-54	65.28	Sterile alpha motif domain-containing protein isoform 1 OS=Theobroma cacao OX=36...	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Molecular Function**
Term	Definition
GO:0005515	protein binding

Vocabulary: **INTERPRO**
Term	Definition
IPR013761	SAM/pointed_sf
IPR001660	SAM

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0005515	protein binding

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg25521-RA	Carg25521-RA	mRNA

InterPro

Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	GENE3D	G3DSA:1.10.150.50		coord: 127..177 e-value: 6.7E-13 score: 50.2
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 110..126
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..18
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 29..70
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..135
None	No IPR available	PANTHER	PTHR23509:SF3	SUBFAMILY NOT NAMED	coord: 122..177
None	No IPR available	PANTHER	PTHR23509	FAMILY NOT NAMED	coord: 122..177
None	No IPR available	PANTHER	PTHR23509	FAMILY NOT NAMED	coord: 1..117
None	No IPR available	PANTHER	PTHR23509:SF3	SUBFAMILY NOT NAMED	coord: 1..117
None	No IPR available	CDD	cd09487	SAM_superfamily	coord: 135..175 e-value: 5.022E-11 score: 53.7825
IPR001660	Sterile alpha motif domain	PFAM	PF00536	SAM_1	coord: 133..175 e-value: 4.3E-10 score: 39.8
IPR001660	Sterile alpha motif domain	PROSITE	PS50105	SAM_DOMAIN	coord: 131..177 score: 10.415
IPR013761	Sterile alpha motif/pointed domain superfamily	SUPERFAMILY	SSF47769	SAM/Pointed domain	coord: 134..175

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Carg25521	Cla014941	Watermelon (97103) v1	carwmB0422
Carg25521	Csa7G341210	Cucumber (Chinese Long) v2	carcuB0458
Carg25521	MELO3C021054	Melon (DHL92) v3.5.1	carmeB0434
Carg25521	ClCG09G008850	Watermelon (Charleston Gray)	carwcgB0418
Carg25521	CSPI07G14290	Wild cucumber (PI 183967)	carcpiB0463
Carg25521	Cucsa.078240	Cucumber (Gy14) v1	carcgyB0492
Carg25521	CmaCh17G012700	Cucurbita maxima (Rimu)	carcmaB0591
Carg25521	Lsi02G020980	Bottle gourd (USVL1VR-Ls)	carlsiB386
Carg25521	Cp4.1LG12g11120	Cucurbita pepo (Zucchini)	carcpeB0597
Carg25521	CsGy7G012890	Cucumber (Gy14) v2	carcgybB0434
Carg25521	MELO3C021054.2	Melon (DHL92) v3.6.1	carmedB0436
Carg25521	CsaV3_7G026020	Cucumber (Chinese Long) v3	carcucB0459
Carg25521	Cla97C09G171640	Watermelon (97103) v2	carwmbB0449

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:

None