Carg25513 (gene) Silver-seed gourd
The following sequences are available for this feature:
Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below.ATGAGCTGCTTTCCGTGTTTCTCGTCTCAGAAGAGCAAGAAAGGAATCGATAAGAACGGCAATGACAATGCTTCCTCATCCTCCTCCGGCCACCGCACTCCTCCTCCGCCCCCCAAGTCCCCTGGTCTGTTCTTCTCCATTCATCCACCCCCCCCCCCCCACTAAGTCATATCATATTGATAATTAATATAATGTATTTTAATGTTATAAGCTTATATCATCATTTTGATATTTTAATATTTTTGAAGTATGAGATTAAAAAAATAATAATAATAACCTAAGGGTAATATTTATTTAGCCAAATACAAAACTGAAAAATGAAATGCCAGCAATATCGAAAAAAGAATAATTTAAGAGCATGAAATTAAATAATATCTTTTAGTATGAATGAAGAGAGTATGGGTTAAATTTGAAGATTGGGACTTAAATTAAACAGAGACTACCACACCGAAGCCTCCTGAGGAAGTCAAGGACAAACCACAAGAAGGTGAAAAAATAGATGCCCAAAGCTTCACTTTCCGGGAGCTAGCCACTGCTACAAAGAATTTCCGTCAGGAATGTCTTTTGGGCGAAGGTGGATTTGGGAAAGTCTTTAAGGCTACCCTACAAAGTGGCCAGGTAACTAACCAAAAATTCCGAGCATAGATTAAGGGGACGTTTAGATTGGCTTTCTACGTGCTTAAAGAAGTGTTTCGAAGTGGGGAAAGATATGGCTTTAAGCAATTAGAAAGTCGATCCAAACAAGTCCGGGATATTAACTCTCCTCGGTTCGTAATATTCTAAAAAGGAATGTTCATAGAGATTGTTTGTTTGGGTTGTGTGTTTTTATTTAAGGTGGTGGCTGTGAAGCAGCTGGATAGAAATGGGCTACAAGGAAACAAGGATTTTCTTGGTGAGGTCAACGAATTGAGCCTTCTAAGCCATCCAAATCTTGTGAAGTTCAATGGATATTGTGCAGATGGAGATCAAAGGATTTTGGTCTATGAATATATGCCAGGAGGTTCTTTGGAAGATCGTCTCTTTGGTATGTACTCCGAGTATTATAAATTAAATTCTCTAAACTTAGGAACTTGTTACATTATTGAGATATCATGTGGTTTGATTATAAGGTAAATGTTGATGGATTGATTTAGCATCATGATGTGTAAAATAATGTAGTTCATGCAAAATGCATACCATTTTTTATCTGGCTGCATCGTCCACCTCAAGCTCCAGTAATTTGTTTGCCAAATAATATCAATCAGCTACCTATTAAACAAACATGTTTCATTAAACTATGTTTCAATATTGGCAGACATAAAAGAGGATCAAAAGCCATTGGATTGGTTTGTTCGTATAAAGATAGCATCAGGAGTTGCAAAAGGATTGGAATACCTGCATGATCAAGCAGATCCTCCCATAATATTTCGTGATTTGAAGTCATCAAACATCTTGCTAGACGAGGATTTCAATCCAAAGCTTTCTGATTTCGGGCTCGCAAAGCTCGGCTCTGGCGGCGATAAGTCACCTTTGCCATCGAGGGTCATGGGCACCTATGGCTACTCTGCTCCTGAATACACAAGTGGTGGACAACTCACTTCCAAGTCTGATATTTACAGCTTTGGAGTTGTGATGCTTGAACTCATTACCGGAAGAAAAGCCGTTGACACTACAAAGCCACATAACGAGCAGAATCTTGTTACTTGGGTATGATTTTCTTTTTAATTTGTGTTTGGATTTAAATTTAGTGGATCGTGTGTCGAATCATTAACAAATAAACCCAAATTTAGGGAACTTAGTTTAGTTTCTACCTTTCAGATGATGGATCATTGAAAACTATATGGGTGATTTGAACAGTTTGAAATTTCTAGTGAGATTCACATGCAGAAATAAACAGCTAAAAGAATGAACTCACAATATAGAGGCCTTTTCCTTCTGCTTTGCCCAAGAATCTATCAATTGGACAATGATTTCAGTACTCCTTTAAATTATGTGAGCTTTGAAGCCATGGCTGTATAACAGGCACAGCCATTTTTCCGAGATCCAAAGAGATTTCCAGACCTGGCCGATCCACTCCTCGGGCGATTGTTCCCGGAGAAAGATCTGAATCAGGCCGTTGCCGTCACCGCCATGTGTCTGCAAGAGGAAGCAGAAGTCCGTCCTCTGATCGCCGACGTCATGACGGCTCTCAGTTTTCTTTCCACAGTTCCAGACGAGAATCTCACTCCACTCCCTTATCCACCGGAACCCGAGCCTGAGGAGGAGGAGGAGGAGGAGGATGATGCAGGCGACGATTACTCTTCAGAATCTTCGGATTCCGATACCGAATCTCGAAAAATCGGAAAAGGAGACAGAGACGGCGCATCTGCAAATTTCACAAGCGCAAGAAACCACGACTCAGATACCTCAGATGATGAAGATGAACAAAAAGACAATTCCAGCAAGAAGAAACCTAAAAACAAAGACTCTGAACAGAAACGAGTGGTATTCAAAGACGACGTACAGCCAAATCACAGCAGAAAAAACAGCTCCTCATCGAGCGATGGAGGCTCTTCACCTAGAAGCAGCAACGCATCAGAAAATAGAAGAATCGACAGCAGAGATTCATCTTTCAAACTGCAAAAAGAAGCTTCGGATATTGTAAATAGTACCGATTCTACATTAGAGCATAAGAGCAGCGATTCCGACGGCGGCTCTGAACATGACGGCAAAGATTGA ATGAGCTGCTTTCCGTGTTTCTCGTCTCAGAAGAGCAAGAAAGGAATCGATAAGAACGGCAATGACAATGCTTCCTCATCCTCCTCCGGCCACCGCACTCCTCCTCCGCCCCCCAAGTCCCCTGAGACTACCACACCGAAGCCTCCTGAGGAAGTCAAGGACAAACCACAAGAAGGTGAAAAAATAGATGCCCAAAGCTTCACTTTCCGGGAGCTAGCCACTGCTACAAAGAATTTCCGTCAGGAATGTCTTTTGGGCGAAGGTGGATTTGGGAAAGTCTTTAAGGCTACCCTACAAAGTGGCCAGGCACAGCCATTTTTCCGAGATCCAAAGAGATTTCCAGACCTGGCCGATCCACTCCTCGGGCGATTGTTCCCGGAGAAAGATCTGAATCAGGCCGTTGCCGTCACCGCCATGTGTCTGCAAGAGGAAGCAGAAGTCCGTCCTCTGATCGCCGACGTCATGACGGCTCTCAGTTTTCTTTCCACAGTTCCAGACGAGAATCTCACTCCACTCCCTTATCCACCGGAACCCGAGCCTGAGGAGGAGGAGGAGGAGGAGGATGATGCAGGCGACGATTACTCTTCAGAATCTTCGGATTCCGATACCGAATCTCGAAAAATCGGAAAAGGAGACAGAGACGGCGCATCTGCAAATTTCACAAGCGCAAGAAACCACGACTCAGATACCTCAGATGATGAAGATGAACAAAAAGACAATTCCAGCAAGAAGAAACCTAAAAACAAAGACTCTGAACAGAAACGAGTGGTATTCAAAGACGACGTACAGCCAAATCACAGCAGAAAAAACAGCTCCTCATCGAGCGATGGAGGCTCTTCACCTAGAAGCAGCAACGCATCAGAAAATAGAAGAATCGACAGCAGAGATTCATCTTTCAAACTGCAAAAAGAAGCTTCGGATATTGTAAATAGTACCGATTCTACATTAGAGCATAAGAGCAGCGATTCCGACGGCGGCTCTGAACATGACGGCAAAGATTGA ATGAGCTGCTTTCCGTGTTTCTCGTCTCAGAAGAGCAAGAAAGGAATCGATAAGAACGGCAATGACAATGCTTCCTCATCCTCCTCCGGCCACCGCACTCCTCCTCCGCCCCCCAAGTCCCCTGAGACTACCACACCGAAGCCTCCTGAGGAAGTCAAGGACAAACCACAAGAAGGTGAAAAAATAGATGCCCAAAGCTTCACTTTCCGGGAGCTAGCCACTGCTACAAAGAATTTCCGTCAGGAATGTCTTTTGGGCGAAGGTGGATTTGGGAAAGTCTTTAAGGCTACCCTACAAAGTGGCCAGGCACAGCCATTTTTCCGAGATCCAAAGAGATTTCCAGACCTGGCCGATCCACTCCTCGGGCGATTGTTCCCGGAGAAAGATCTGAATCAGGCCGTTGCCGTCACCGCCATGTGTCTGCAAGAGGAAGCAGAAGTCCGTCCTCTGATCGCCGACGTCATGACGGCTCTCAGTTTTCTTTCCACAGTTCCAGACGAGAATCTCACTCCACTCCCTTATCCACCGGAACCCGAGCCTGAGGAGGAGGAGGAGGAGGAGGATGATGCAGGCGACGATTACTCTTCAGAATCTTCGGATTCCGATACCGAATCTCGAAAAATCGGAAAAGGAGACAGAGACGGCGCATCTGCAAATTTCACAAGCGCAAGAAACCACGACTCAGATACCTCAGATGATGAAGATGAACAAAAAGACAATTCCAGCAAGAAGAAACCTAAAAACAAAGACTCTGAACAGAAACGAGTGGTATTCAAAGACGACGTACAGCCAAATCACAGCAGAAAAAACAGCTCCTCATCGAGCGATGGAGGCTCTTCACCTAGAAGCAGCAACGCATCAGAAAATAGAAGAATCGACAGCAGAGATTCATCTTTCAAACTGCAAAAAGAAGCTTCGGATATTGTAAATAGTACCGATTCTACATTAGAGCATAAGAGCAGCGATTCCGACGGCGGCTCTGAACATGACGGCAAAGATTGA MSCFPCFSSQKSKKGIDKNGNDNASSSSSGHRTPPPPPKSPETTTPKPPEEVKDKPQEGEKIDAQSFTFRELATATKNFRQECLLGEGGFGKVFKATLQSGQAQPFFRDPKRFPDLADPLLGRLFPEKDLNQAVAVTAMCLQEEAEVRPLIADVMTALSFLSTVPDENLTPLPYPPEPEPEEEEEEEDDAGDDYSSESSDSDTESRKIGKGDRDGASANFTSARNHDSDTSDDEDEQKDNSSKKKPKNKDSEQKRVVFKDDVQPNHSRKNSSSSSDGGSSPRSSNASENRRIDSRDSSFKLQKEASDIVNSTDSTLEHKSSDSDGGSEHDGKD
BLAST of Carg25513 vs. NCBI nr
Match: XP_022960613.1 (probable serine/threonine-protein kinase PBL25 [Cucurbita moschata]) HSP 1 Score: 216.5 bits (550), Expect = 1.4e-52 Identity = 322/541 (59.52%), Postives = 323/541 (59.70%), Query Frame = 0
BLAST of Carg25513 vs. NCBI nr
Match: XP_022987456.1 (probable serine/threonine-protein kinase PBL25 [Cucurbita maxima]) HSP 1 Score: 186.4 bits (472), Expect = 1.6e-43 Identity = 310/547 (56.67%), Postives = 312/547 (57.04%), Query Frame = 0
BLAST of Carg25513 vs. NCBI nr
Match: XP_004142598.2 (PREDICTED: serine/threonine-protein kinase At3g07070-like [Cucumis sativus] >KGN66718.1 hypothetical protein Csa_1G662820 [Cucumis sativus]) HSP 1 Score: 173.3 bits (438), Expect = 1.4e-39 Identity = 302/562 (53.74%), Postives = 308/562 (54.80%), Query Frame = 0
BLAST of Carg25513 vs. NCBI nr
Match: GAU20599.1 (hypothetical protein TSUD_33350 [Trifolium subterraneum]) HSP 1 Score: 168.3 bits (425), Expect = 4.4e-38 Identity = 90/174 (51.72%), Postives = 112/174 (64.37%), Query Frame = 0
BLAST of Carg25513 vs. NCBI nr
Match: XP_022930374.1 (probable serine/threonine-protein kinase PBL26 [Cucurbita moschata]) HSP 1 Score: 163.7 bits (413), Expect = 1.1e-36 Identity = 129/366 (35.25%), Postives = 132/366 (36.07%), Query Frame = 0
BLAST of Carg25513 vs. TAIR10
Match: AT3G07070.1 (Protein kinase superfamily protein) HSP 1 Score: 96.3 bits (238), Expect = 3.8e-20 Identity = 46/68 (67.65%), Postives = 56/68 (82.35%), Query Frame = 0
HSP 2 Score: 66.6 bits (161), Expect = 3.2e-11 Identity = 38/100 (38.00%), Postives = 51/100 (51.00%), Query Frame = 0
BLAST of Carg25513 vs. TAIR10
Match: AT4G13190.1 (Protein kinase superfamily protein) HSP 1 Score: 94.0 bits (232), Expect = 1.9e-19 Identity = 46/61 (75.41%), Postives = 52/61 (85.25%), Query Frame = 0
HSP 2 Score: 57.4 bits (137), Expect = 2.0e-08 Identity = 25/40 (62.50%), Postives = 33/40 (82.50%), Query Frame = 0
BLAST of Carg25513 vs. TAIR10
Match: AT5G16500.1 (Protein kinase superfamily protein) HSP 1 Score: 92.0 bits (227), Expect = 7.2e-19 Identity = 43/67 (64.18%), Postives = 54/67 (80.60%), Query Frame = 0
HSP 2 Score: 73.6 bits (179), Expect = 2.7e-13 Identity = 40/100 (40.00%), Postives = 52/100 (52.00%), Query Frame = 0
BLAST of Carg25513 vs. TAIR10
Match: AT3G02810.1 (Protein kinase superfamily protein) HSP 1 Score: 91.3 bits (225), Expect = 1.2e-18 Identity = 45/69 (65.22%), Postives = 55/69 (79.71%), Query Frame = 0
HSP 2 Score: 69.3 bits (168), Expect = 5.0e-12 Identity = 31/44 (70.45%), Postives = 37/44 (84.09%), Query Frame = 0
BLAST of Carg25513 vs. TAIR10
Match: AT3G24790.1 (Protein kinase superfamily protein) HSP 1 Score: 80.1 bits (196), Expect = 2.8e-15 Identity = 41/68 (60.29%), Postives = 49/68 (72.06%), Query Frame = 0
HSP 2 Score: 65.5 bits (158), Expect = 7.2e-11 Identity = 28/37 (75.68%), Postives = 34/37 (91.89%), Query Frame = 0
BLAST of Carg25513 vs. Swiss-Prot
Match: sp|Q9SFT7|PBL26_ARATH (Probable serine/threonine-protein kinase PBL26 OS=Arabidopsis thaliana OX=3702 GN=PBL26 PE=2 SV=1) HSP 1 Score: 96.3 bits (238), Expect = 6.9e-19 Identity = 46/68 (67.65%), Postives = 56/68 (82.35%), Query Frame = 0
HSP 2 Score: 66.6 bits (161), Expect = 5.9e-10 Identity = 38/100 (38.00%), Postives = 51/100 (51.00%), Query Frame = 0
BLAST of Carg25513 vs. Swiss-Prot
Match: sp|Q1PE89|PBL24_ARATH (Probable serine/threonine-protein kinase PBL24 OS=Arabidopsis thaliana OX=3702 GN=PBL24 PE=2 SV=1) HSP 1 Score: 94.0 bits (232), Expect = 3.4e-18 Identity = 46/61 (75.41%), Postives = 52/61 (85.25%), Query Frame = 0
HSP 2 Score: 57.4 bits (137), Expect = 3.6e-07 Identity = 25/40 (62.50%), Postives = 33/40 (82.50%), Query Frame = 0
BLAST of Carg25513 vs. Swiss-Prot
Match: sp|Q1PDW3|LIPG1_ARATH (Receptor-like kinase LIP1 OS=Arabidopsis thaliana OX=3702 GN=LIP1 PE=1 SV=1) HSP 1 Score: 92.0 bits (227), Expect = 1.3e-17 Identity = 43/67 (64.18%), Postives = 54/67 (80.60%), Query Frame = 0
HSP 2 Score: 73.6 bits (179), Expect = 4.8e-12 Identity = 40/100 (40.00%), Postives = 52/100 (52.00%), Query Frame = 0
BLAST of Carg25513 vs. Swiss-Prot
Match: sp|Q9M8S2|LIPG2_ARATH (Receptor-like kinase LIP2 OS=Arabidopsis thaliana OX=3702 GN=LIP2 PE=1 SV=1) HSP 1 Score: 91.3 bits (225), Expect = 2.2e-17 Identity = 45/69 (65.22%), Postives = 55/69 (79.71%), Query Frame = 0
HSP 2 Score: 69.3 bits (168), Expect = 9.0e-11 Identity = 31/44 (70.45%), Postives = 37/44 (84.09%), Query Frame = 0
BLAST of Carg25513 vs. Swiss-Prot
Match: sp|Q9LRY1|PBL25_ARATH (Probable serine/threonine-protein kinase PBL25 OS=Arabidopsis thaliana OX=3702 GN=PBL25 PE=2 SV=1) HSP 1 Score: 80.1 bits (196), Expect = 5.1e-14 Identity = 41/68 (60.29%), Postives = 49/68 (72.06%), Query Frame = 0
HSP 2 Score: 66.2 bits (160), Expect = 7.7e-10 Identity = 40/100 (40.00%), Postives = 49/100 (49.00%), Query Frame = 0
BLAST of Carg25513 vs. TrEMBL
Match: tr|A0A0A0LY64|A0A0A0LY64_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G662820 PE=4 SV=1) HSP 1 Score: 173.3 bits (438), Expect = 9.0e-40 Identity = 302/562 (53.74%), Postives = 308/562 (54.80%), Query Frame = 0
BLAST of Carg25513 vs. TrEMBL
Match: tr|A0A1S3B9J3|A0A1S3B9J3_CUCME (serine/threonine-protein kinase At3g07070-like isoform X2 OS=Cucumis melo OX=3656 GN=LOC103487262 PE=4 SV=1) HSP 1 Score: 162.9 bits (411), Expect = 1.2e-36 Identity = 163/373 (43.70%), Postives = 164/373 (43.97%), Query Frame = 0
BLAST of Carg25513 vs. TrEMBL
Match: tr|A0A1R3GMK0|A0A1R3GMK0_9ROSI (Uncharacterized protein OS=Corchorus olitorius OX=93759 GN=COLO4_34245 PE=4 SV=1) HSP 1 Score: 154.5 bits (389), Expect = 4.3e-34 Identity = 78/116 (67.24%), Postives = 91/116 (78.45%), Query Frame = 0
BLAST of Carg25513 vs. TrEMBL
Match: tr|A0A1S3B8A2|A0A1S3B8A2_CUCME (serine/threonine-protein kinase At3g07070-like isoform X1 OS=Cucumis melo OX=3656 GN=LOC103487262 PE=4 SV=1) HSP 1 Score: 153.3 bits (386), Expect = 9.6e-34 Identity = 159/373 (42.63%), Postives = 160/373 (42.90%), Query Frame = 0
BLAST of Carg25513 vs. TrEMBL
Match: tr|A0A1R3KH12|A0A1R3KH12_9ROSI (Uncharacterized protein OS=Corchorus olitorius OX=93759 GN=COLO4_08175 PE=4 SV=1) HSP 1 Score: 151.0 bits (380), Expect = 4.8e-33 Identity = 74/109 (67.89%), Postives = 88/109 (80.73%), Query Frame = 0
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene:
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