Carg25428 (gene) Silver-seed gourd | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Carg25428
Type	gene
Organism	Cucurbita argyrosperma (Silver-seed gourd)
Description	F-box protein At4g18380-like
Location	Cucurbita_argyrosperma_scaffold_300 : 61062 .. 62387 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGATCCGATCAAGGATCAATTTGAAATACGAAATCGAGGTCAAGAACAGCAACAACTAGTTGTAGATGAAGAAGAAGAAGAAGATGATGATGATGATTTAGACTATTTTGATCTTCTTCCTGATGCGATTCTTCATCTCATCTTCAACAAATTGATCGATGCTCGTTCTCTTATTCGATGCCTTGCCGTCTCCAAGCGATTCGCTTCTCTCATTTTGCAATCCGAGACTGTTTTTCTTGCGATTCCTCGTCCTGTACTTGATTCGAAGCGGAAATCGAGAGTCGGTCGTCGATCGCCGCCGAATTCCTTGATTAGGTTTTTTGTTCGTAAGTTTGTGTTTACGCCTTTTCGTTTTATTCGGCGTGTGATTACTCGTACTTCGACGCCGAGTTCTGGATTTGGCGATTGGTACTACTGGCCGAGTGTTGCGTTGAAGGAATTTAGAGGAATTAAGTTCGTTCATATGGAACTTCCTTGCTGTGGCGATGAAATCGGCTCTATTCATGGCGGTGGTCCCTTGCTTAAGTGGAAGGCCGAGTTCGGTGCTGAATTGAAGAGTTGCGTCGTTCTTGGAGCGTCGTCTTTGCGGCGGAAATCGATTGTTCATTCTGATTCAGAGGCCAAAGAAACAGAAGAAGAACGCGTAGTAGAAGCAGATTCGGAAACGGAATTGGGAGACGAAGAACTTAAACTACGAATCGTATGGACGATTTCATCCCTAATCGCTGCTTCCATGAGACATTATTTGGTCAAACAGATGGTAGCCGATTTCCCGATGCTACAGAGCGTGGTGATAACCGATTCAACAAAACAAGGAAGACTCTGTATGGAGGAGAAACAACTCAAAGAACTGAGAGACTCGATGAAATCCTCCACTTCGAATCAATCTCCAGTAGAAAGGACTGTAATACCAGATCTGCACATGAAGATGTGGCATGTGCCGGTGCTGGACCTACCAGCGTCCGGCTCGGTGATGACGGCGGCGACTCTGGTCGTGATCAGACCTAGTTCTGCAGGTATGGCTTTAGATGGATTAGATAAAATGGGAGATGAATTCGACGCAGAAGAAACAGAGAAACATGGAGCATATGGTGAAGCTGCGAGAAAATTGATGAAGTTGAAAAGAAACTACACCTTGGAGGTAAATTCTTTCTGATTATCAAGAACATCATCCATCACGAATTCTTGTTCCCACTTTCTAGGGCTGTCGAGTAGAGAATTGGTGTAAATTTTGGTGAGCCTTTTATTTAATCTGTTAGGTTTGTGGTTTAGATTCGTTTTGGGCATCTAACCTTTTGTTTTTTCGTTTGGCTCAAAGATTTAG

mRNA sequence

ATGGATCCGATCAAGGATCAATTTGAAATACGAAATCGAGGTCAAGAACAGCAACAACTAGTTGTAGATGAAGAAGAAGAAGAAGATGATGATGATGATTTAGACTATTTTGATCTTCTTCCTGATGCGATTCTTCATCTCATCTTCAACAAATTGATCGATGCTCGTTCTCTTATTCGATGCCTTGCCGTCTCCAAGCGATTCGCTTCTCTCATTTTGCAATCCGAGACTGTTTTTCTTGCGATTCCTCGTCCTGTACTTGATTCGAAGCGGAAATCGAGAGTCGGTCGTCGATCGCCGCCGAATTCCTTGATTAGGTTTTTTGTTCGTAAGTTTGTGTTTACGCCTTTTCGTTTTATTCGGCGTGTGATTACTCGTACTTCGACGCCGAGTTCTGGATTTGGCGATTGGTACTACTGGCCGAGTGTTGCGTTGAAGGAATTTAGAGGAATTAAGTTCGTTCATATGGAACTTCCTTGCTGTGGCGATGAAATCGGCTCTATTCATGGCGGTGGTCCCTTGCTTAAGTGGAAGGCCGAGTTCGGTGCTGAATTGAAGAGTTGCGTCGTTCTTGGAGCGTCGTCTTTGCGGCGGAAATCGATTGTTCATTCTGATTCAGAGGCCAAAGAAACAGAAGAAGAACGCGTAGTAGAAGCAGATTCGGAAACGGAATTGGGAGACGAAGAACTTAAACTACGAATCGTATGGACGATTTCATCCCTAATCGCTGCTTCCATGAGACATTATTTGGTCAAACAGATGGTAGCCGATTTCCCGATGCTACAGAGCGTGGTGATAACCGATTCAACAAAACAAGGAAGACTCTGTATGGAGGAGAAACAACTCAAAGAACTGAGAGACTCGATGAAATCCTCCACTTCGAATCAATCTCCAGTAGAAAGGACTGTAATACCAGATCTGCACATGAAGATGTGGCATGTGCCGGTGCTGGACCTACCAGCGTCCGGCTCGGTGATGACGGCGGCGACTCTGGTCGTGATCAGACCTAGTTCTGCAGGTATGGCTTTAGATGGATTAGATAAAATGGGAGATGAATTCGACGCAGAAGAAACAGAGAAACATGGAGCATATGGTGAAGCTGCGAGAAAATTGATGAAGTTGAAAAGAAACTACACCTTGGAGATTTAG

Coding sequence (CDS)

ATGGATCCGATCAAGGATCAATTTGAAATACGAAATCGAGGTCAAGAACAGCAACAACTAGTTGTAGATGAAGAAGAAGAAGAAGATGATGATGATGATTTAGACTATTTTGATCTTCTTCCTGATGCGATTCTTCATCTCATCTTCAACAAATTGATCGATGCTCGTTCTCTTATTCGATGCCTTGCCGTCTCCAAGCGATTCGCTTCTCTCATTTTGCAATCCGAGACTGTTTTTCTTGCGATTCCTCGTCCTGTACTTGATTCGAAGCGGAAATCGAGAGTCGGTCGTCGATCGCCGCCGAATTCCTTGATTAGGTTTTTTGTTCGTAAGTTTGTGTTTACGCCTTTTCGTTTTATTCGGCGTGTGATTACTCGTACTTCGACGCCGAGTTCTGGATTTGGCGATTGGTACTACTGGCCGAGTGTTGCGTTGAAGGAATTTAGAGGAATTAAGTTCGTTCATATGGAACTTCCTTGCTGTGGCGATGAAATCGGCTCTATTCATGGCGGTGGTCCCTTGCTTAAGTGGAAGGCCGAGTTCGGTGCTGAATTGAAGAGTTGCGTCGTTCTTGGAGCGTCGTCTTTGCGGCGGAAATCGATTGTTCATTCTGATTCAGAGGCCAAAGAAACAGAAGAAGAACGCGTAGTAGAAGCAGATTCGGAAACGGAATTGGGAGACGAAGAACTTAAACTACGAATCGTATGGACGATTTCATCCCTAATCGCTGCTTCCATGAGACATTATTTGGTCAAACAGATGGTAGCCGATTTCCCGATGCTACAGAGCGTGGTGATAACCGATTCAACAAAACAAGGAAGACTCTGTATGGAGGAGAAACAACTCAAAGAACTGAGAGACTCGATGAAATCCTCCACTTCGAATCAATCTCCAGTAGAAAGGACTGTAATACCAGATCTGCACATGAAGATGTGGCATGTGCCGGTGCTGGACCTACCAGCGTCCGGCTCGGTGATGACGGCGGCGACTCTGGTCGTGATCAGACCTAGTTCTGCAGGTATGGCTTTAGATGGATTAGATAAAATGGGAGATGAATTCGACGCAGAAGAAACAGAGAAACATGGAGCATATGGTGAAGCTGCGAGAAAATTGATGAAGTTGAAAAGAAACTACACCTTGGAGATTTAG

Protein sequence

MDPIKDQFEIRNRGQEQQQLVVDEEEEEDDDDDLDYFDLLPDAILHLIFNKLIDARSLIRCLAVSKRFASLILQSETVFLAIPRPVLDSKRKSRVGRRSPPNSLIRFFVRKFVFTPFRFIRRVITRTSTPSSGFGDWYYWPSVALKEFRGIKFVHMELPCCGDEIGSIHGGGPLLKWKAEFGAELKSCVVLGASSLRRKSIVHSDSEAKETEEERVVEADSETELGDEELKLRIVWTISSLIAASMRHYLVKQMVADFPMLQSVVITDSTKQGRLCMEEKQLKELRDSMKSSTSNQSPVERTVIPDLHMKMWHVPVLDLPASGSVMTAATLVVIRPSSAGMALDGLDKMGDEFDAEETEKHGAYGEAARKLMKLKRNYTLEI

Homology

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BLAST of Carg25428 vs. NCBI nr
Match: XP_022928580.1 (F-box protein At4g18380-like [Cucurbita moschata])

HSP 1 Score: 702.6 bits (1812), Expect = 7.4e-199
Identity = 380/382 (99.48%), Postives = 382/382 (100.00%), Query Frame = 0


Query: 1   MDPIKDQFEIRNRGQXXXXXXXXXXXXXXXXXXLDYFDLLPDAILHLIFNKLIDARSLIR 60
           MDPIKDQFEIRNRGQXXXXXXXXXXXXXXXXXXLDYFDLLPDAILHLIFNKLIDARSLIR
Sbjct: 1   MDPIKDQFEIRNRGQXXXXXXXXXXXXXXXXXXLDYFDLLPDAILHLIFNKLIDARSLIR 60

Query: 61  CLAVSKRFASLILQSETVFLAIPRPVLDSKRKSRVGRRSPPNSLIRFFVRKFVFTPFRFI 120
           CLAVSKRFASLILQSETVFLAIPRPVLDSKRKSRVGRRSPPNSLIRFFVRKFVFTPFRFI
Sbjct: 61  CLAVSKRFASLILQSETVFLAIPRPVLDSKRKSRVGRRSPPNSLIRFFVRKFVFTPFRFI 120

Query: 121 RRVITRTSTPSSGFGDWYYWPSVALKEFRGIKFVHMELPCCGDEIGSIHGGGPLLKWKAE 180
           RRVITRTSTPSSGFGDWYYWPSVALKEFRGIKFVHMELPCCGDEIGSIHGGGPLLKWKAE
Sbjct: 121 RRVITRTSTPSSGFGDWYYWPSVALKEFRGIKFVHMELPCCGDEIGSIHGGGPLLKWKAE 180

Query: 181 FGAELKSCVVLGASSLRRKSIVHSDSEAKETEEERVVEADSETELGDEELKLRIVWTISS 240
           FGAELKSCVVLGASSLRRKSIVHSDSEAKETEEERVVEADSETELGDEELKLRIVWTISS
Sbjct: 181 FGAELKSCVVLGASSLRRKSIVHSDSEAKETEEERVVEADSETELGDEELKLRIVWTISS 240

Query: 241 LIAASMRHYLVKQMVADFPMLQSVVITDSTKQGRLCMEEKQLKELRDSMKSSTSNQSPVE 300
           LIAASMRHYLVKQMVADFPMLQSVVITDSTKQGRLCMEEKQLKELRDSMKSSTSNQSPVE
Sbjct: 241 LIAASMRHYLVKQMVADFPMLQSVVITDSTKQGRLCMEEKQLKELRDSMKSSTSNQSPVE 300

Query: 301 RTVIPDLHMKMWHVPVLDLPASGSVMTAATLVVIRPSSAGMALDGLDKMGDEFDAEETEK 360
           RTVIPDLHMKMWHVPVLDLPASGSVMTAATLVVIRPSSAG+ALDGLDKMGDEFDAEETEK
Sbjct: 301 RTVIPDLHMKMWHVPVLDLPASGSVMTAATLVVIRPSSAGIALDGLDKMGDEFDAEETEK 360

Query: 361 HGAYGEAARKLMKLKRNYTLEI 383
           HGAYGEAARKLMKLKRNYTLE+
Sbjct: 361 HGAYGEAARKLMKLKRNYTLEV 382

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BLAST of Carg25428 vs. NCBI nr
Match: XP_023530591.1 (F-box protein At4g18380-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 694.9 bits (1792), Expect = 1.5e-196
Identity = 376/382 (98.43%), Postives = 379/382 (99.21%), Query Frame = 0


Query: 1   MDPIKDQFEIRNRGQXXXXXXXXXXXXXXXXXXLDYFDLLPDAILHLIFNKLIDARSLIR 60
           MDPIK+QFEIRNRGQXXXXXXXXXXXXXXXXXXLDYFDLLPDAILHLIFNKLIDARSLIR
Sbjct: 1   MDPIKNQFEIRNRGQXXXXXXXXXXXXXXXXXXLDYFDLLPDAILHLIFNKLIDARSLIR 60

Query: 61  CLAVSKRFASLILQSETVFLAIPRPVLDSKRKSRVGRRSPPNSLIRFFVRKFVFTPFRFI 120
           CLAVSKRFASLI QS+TVFLAIPRPVLDSKRKSRVGRRSPPNSLIRFFVRKFVFTPFRFI
Sbjct: 61  CLAVSKRFASLISQSDTVFLAIPRPVLDSKRKSRVGRRSPPNSLIRFFVRKFVFTPFRFI 120

Query: 121 RRVITRTSTPSSGFGDWYYWPSVALKEFRGIKFVHMELPCCGDEIGSIHGGGPLLKWKAE 180
           RRVITRTS PSSGFGDWYYWPSVALKEFRGIKFVHMELPCCGDEIGSIHGGGPLLKWKAE
Sbjct: 121 RRVITRTSPPSSGFGDWYYWPSVALKEFRGIKFVHMELPCCGDEIGSIHGGGPLLKWKAE 180

Query: 181 FGAELKSCVVLGASSLRRKSIVHSDSEAKETEEERVVEADSETELGDEELKLRIVWTISS 240
           FGAELKSCVVLGASSLRRKSIVHSDSEAKETEEERVVEADSETELGDEELKLRIVWTISS
Sbjct: 181 FGAELKSCVVLGASSLRRKSIVHSDSEAKETEEERVVEADSETELGDEELKLRIVWTISS 240

Query: 241 LIAASMRHYLVKQMVADFPMLQSVVITDSTKQGRLCMEEKQLKELRDSMKSSTSNQSPVE 300
           LIAASMRHYLVKQMVADFPMLQSVVITDSTKQGRLCMEEKQLKELRDSMKSSTSNQSPVE
Sbjct: 241 LIAASMRHYLVKQMVADFPMLQSVVITDSTKQGRLCMEEKQLKELRDSMKSSTSNQSPVE 300

Query: 301 RTVIPDLHMKMWHVPVLDLPASGSVMTAATLVVIRPSSAGMALDGLDKMGDEFDAEETEK 360
           RTVIPDLHMKMWHVPVLDLPASGSVMTAATLVVIRPSS GMALDGLDKMGDEFDAEETEK
Sbjct: 301 RTVIPDLHMKMWHVPVLDLPASGSVMTAATLVVIRPSSTGMALDGLDKMGDEFDAEETEK 360

Query: 361 HGAYGEAARKLMKLKRNYTLEI 383
           HGAYGEAARKLMKLKRNYTLE+
Sbjct: 361 HGAYGEAARKLMKLKRNYTLEV 382

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BLAST of Carg25428 vs. NCBI nr
Match: XP_023004391.1 (F-box protein At4g18380-like [Cucurbita maxima])

HSP 1 Score: 682.9 bits (1761), Expect = 6.1e-193
Identity = 375/384 (97.66%), Postives = 378/384 (98.44%), Query Frame = 0


Query: 1   MDPIKDQFEIRNRGQ--XXXXXXXXXXXXXXXXXXLDYFDLLPDAILHLIFNKLIDARSL 60
           MDPIK+QFEIRNRGQ  XXXXXXXXXXXXXXXXXXLDYFDLLPDAILHLIFNKLIDARSL
Sbjct: 1   MDPIKNQFEIRNRGQXXXXXXXXXXXXXXXXXXXXLDYFDLLPDAILHLIFNKLIDARSL 60

Query: 61  IRCLAVSKRFASLILQSETVFLAIPRPVLDSKRKSRVGRRSPPNSLIRFFVRKFVFTPFR 120
           IRCLAVSKRFASLI QS+TVFLAIPRPVLDSKRKSRVGRRSPPNSLIRFFVRKFVFTPFR
Sbjct: 61  IRCLAVSKRFASLISQSDTVFLAIPRPVLDSKRKSRVGRRSPPNSLIRFFVRKFVFTPFR 120

Query: 121 FIRRVITRTSTPSSGFGDWYYWPSVALKEFRGIKFVHMELPCCGDEIGSIHGGGPLLKWK 180
           FIRRVITRTS PSSGFGDWYYWPSVALKEFRGIKFVHMELPCCGDEIGSIHGGGPLLKWK
Sbjct: 121 FIRRVITRTSPPSSGFGDWYYWPSVALKEFRGIKFVHMELPCCGDEIGSIHGGGPLLKWK 180

Query: 181 AEFGAELKSCVVLGASSLRRKSIVHSDSEAKETEEERVVEADSETELGDEELKLRIVWTI 240
           AEFGAELKSCVVLGASSLRRKSIVHSDSEAKETEEERVVEADSETELGDEELKLRIVWTI
Sbjct: 181 AEFGAELKSCVVLGASSLRRKSIVHSDSEAKETEEERVVEADSETELGDEELKLRIVWTI 240

Query: 241 SSLIAASMRHYLVKQMVADFPMLQSVVITDSTKQGRLCMEEKQLKELRDSMKSSTSNQSP 300
           SSLIAASMRHYLVKQMVADFPMLQSVVITDSTKQGRL MEEKQLKELRDSMKSSTSNQSP
Sbjct: 241 SSLIAASMRHYLVKQMVADFPMLQSVVITDSTKQGRLYMEEKQLKELRDSMKSSTSNQSP 300

Query: 301 VERTVIPDLHMKMWHVPVLDLPASGSVMTAATLVVIRPSSAGMALDGLDKMGDEFDAEET 360
           VERTVIPDLHMKMWHVPVLDLPASGSVMTAATLVVIRPSSAGMALDGLDKMGDEFDAEET
Sbjct: 301 VERTVIPDLHMKMWHVPVLDLPASGSVMTAATLVVIRPSSAGMALDGLDKMGDEFDAEET 360

Query: 361 EKHGAYGEAARKLMKLKRNYTLEI 383
           EK GAYGEAARKLMKLKRNYTLE+
Sbjct: 361 EKLGAYGEAARKLMKLKRNYTLEV 384

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BLAST of Carg25428 vs. NCBI nr
Match: XP_022154311.1 (F-box protein At4g18380-like [Momordica charantia])

HSP 1 Score: 525.8 bits (1353), Expect = 1.2e-145
Identity = 273/349 (78.22%), Postives = 306/349 (87.68%), Query Frame = 0


Query: 35  DYFDLLPDAILHLIFNKLIDARSLIRCLAVSKRFASLILQSETVFLAIPRPVLDSKRKSR 94
           DYFD LPDA+L LIFNKLIDARSL+RCLAV++RF SLI  S+ VFLAIPRP+LD K KS 
Sbjct: 11  DYFDRLPDALLLLIFNKLIDARSLLRCLAVNRRFGSLIPHSDAVFLAIPRPLLDHKGKSA 70

Query: 95  VGRRSPPNSLIRFFVRKFVFTPFRFIRRVITRTS-TPSSGFGDWYYWPSVALKEFRGIKF 154
           + R SP +SL R+F RKFVFTP RF+RR I R+S  PSSGFGDWY+WPS AL+EF GIKF
Sbjct: 71  LRRHSPQSSL-RYFFRKFVFTPIRFLRRAIARSSPPPSSGFGDWYHWPSAALREFGGIKF 130

Query: 155 VHMELPCCGDEIGSIHGGGPLLKWKAEFGAELKSCVVLGASSLRRKSIVHSDSEAKETEE 214
           VHMELPCCG EIGS HGG PLLKWKAEFG ELKSCVVLGASSLRR+SI  S+S+AKET E
Sbjct: 131 VHMELPCCGGEIGSDHGGDPLLKWKAEFGTELKSCVVLGASSLRRRSIAPSNSDAKETGE 190

Query: 215 ERVVEADSETELGDEELKLRIVWTISSLIAASMRHYLVKQMVADFPMLQSVVITDSTKQG 274
           ER V+A+SE+++GDEELKLRIVWTIS+LIAASMRHY VKQMV+DFPMLQSVVITDSTKQG
Sbjct: 191 ER-VDAESESDIGDEELKLRIVWTISALIAASMRHYFVKQMVSDFPMLQSVVITDSTKQG 250

Query: 275 RLCMEEKQLKELRDSMKSSTSNQSPVERTVIPDLHMKMWHVPVLDLPASGSVMTAATLVV 334
           RLCM EKQL ELR+SMKSS S QS VERTVIPDL+MKMWHVPVLDLPASG VMTAATL+V
Sbjct: 251 RLCMREKQLTELRESMKSSDSIQSRVERTVIPDLNMKMWHVPVLDLPASGFVMTAATLIV 310

Query: 335 IRPSSAGMALDGLDKMGDEFDAEETEKHGAYGEAARKLMKLKRNYTLEI 383
           IRP++AG  L+GLD MGD+FDAEE EK GAYGEA +K+MKLKRNY LE+
Sbjct: 311 IRPTAAGTELEGLDTMGDDFDAEEEEKLGAYGEAVKKMMKLKRNYVLEV 357

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BLAST of Carg25428 vs. NCBI nr
Match: XP_008450369.1 (PREDICTED: F-box protein At4g18380-like [Cucumis melo])

HSP 1 Score: 467.6 bits (1202), Expect = 4.0e-128
Identity = 245/349 (70.20%), Postives = 290/349 (83.09%), Query Frame = 0


Query: 35  DYFDLLPDAILHLIFNKLIDARSLIRCLAVSKRFASLILQSETVFLAIPRPVLDSKRKSR 94
           D+FDLLPD+ILHLIF KL  A SLIRCL VSKRFASLI QS++VFL+IP  +L    KSR
Sbjct: 24  DFFDLLPDSILHLIFTKLTHAPSLIRCLTVSKRFASLISQSDSVFLSIPPLLLTPNPKSR 83

Query: 95  VGRRSPPNSLIRFFVRKFVFTPFRFIRRVITRTSTPSSGFGDWYYWPSVALKEFRGIKFV 154
               +PP+  +RFF RKF+F PFRFIRR+IT TS  +S F DWYYWPSVALKE +G+K +
Sbjct: 84  T---TPPS--LRFFFRKFLFNPFRFIRRLITHTSQSTSRFSDWYYWPSVALKELKGLKSL 143

Query: 155 HMELPCCGDEIGSIHGGGPLLKWKAEFGAELKSCVVLGASSLRRKSIVHSD-SEAKETEE 214
           H+ELPCCGDEIGS H GG LLKWKAEFG++LK+CVVLGASSLRRKS+V S+ SE K   E
Sbjct: 144 HIELPCCGDEIGSNHNGGALLKWKAEFGSQLKTCVVLGASSLRRKSVVESESSEVKAETE 203

Query: 215 ERVVEADSETELGDEELKLRIVWTISSLIAASMRHYLVKQMVADFPMLQSVVITDSTKQG 274
           E  + ++SE+E+GD ELK RIVWTISSLIAASMRHYLVKQMV DFP+L++V+ITDS KQG
Sbjct: 204 ENRLHSESESEMGDGELKSRIVWTISSLIAASMRHYLVKQMVNDFPLLKTVLITDSAKQG 263

Query: 275 RLCMEEKQLKELRDSMKSSTSNQSPVERTVIPDLHMKMWHVPVLDLPASGSVMTAATLVV 334
           RLCMEE+++ ELR+SMK S+S  S VER+VIPDL MKMW+VPVLDL A+G VMTAATLVV
Sbjct: 264 RLCMEEEEVMELRESMKLSSS--SCVERSVIPDLKMKMWYVPVLDLAAAGFVMTAATLVV 323

Query: 335 IRPSSAGMALDGLDKMGDEFDAEETEKHGAYGEAARKLMKLKRNYTLEI 383
           I+PS  GM LDGL+++GDEFD+E+ EK G YGEA RKLMKLKRNY LE+
Sbjct: 324 IKPSGGGMGLDGLERIGDEFDSEDGEKFGVYGEAVRKLMKLKRNYALEV 365

[Close]

BLAST of Carg25428 vs. TAIR10
Match: AT4G18380.1 (F-box family protein)

HSP 1 Score: 194.5 bits (493), Expect = 1.2e-49
Identity = 143/376 (38.03%), Postives = 209/376 (55.59%), Query Frame = 0


Query: 34  LDYFDLLPDAILHLIFNKLIDARSLIRCLAVSKRFASLILQSETVFLAIPRPVLDSKRKS 93
           +D+FD LPD+IL LIFN + D ++L RC  VSKRF SLI Q E VF+ +   + D    S
Sbjct: 22  IDHFDNLPDSILLLIFNNIGDVKALGRCSVVSKRFHSLIPQVENVFVRVDCVISDDDSSS 81

Query: 94  RVGRRSPPNSLIRFF--VRKFVFTPFRFIRRVITRT--------STPSSGF--------- 153
            +  +    S    F  + + VF P + + + + R+        S+PSS           
Sbjct: 82  LLSDKPRSASAASPFSAIFRLVFKPLQALGQFLKRSGSSSLPSGSSPSSLLISGGDDGEI 141

Query: 154 ---GDWYYWPSVALKEFRGIKFVHMELPCCGDEIGSIHGGGPLLKWKAEFGAELKSCVVL 213
              G  ++ P+  LK F  IKF+ +ELP    E+G     G LLKW+AEFG+ L++CV+L
Sbjct: 142 EQGGVTHHSPTQVLKNFDEIKFLKIELP--SGELGI--DDGVLLKWRAEFGSTLENCVIL 201

Query: 214 GASSLRRKSIVHSDSEAKETEEERVVEADSETELGDE-----ELKLRIVWTISSLIAASM 273
           GASS+    I  ++S+  E     V   +    + +       LKLR+VWTISSLIAAS 
Sbjct: 202 GASSV----IPPTNSDKTEASSAPVAAVEDNGSIPESFYTNGGLKLRVVWTISSLIAASA 261

Query: 274 RHYLVKQMVADFPMLQSVVITDSTKQGRLCMEEKQLKELRDSMKSSTSNQSPVERTVIPD 333
           RHYL++ ++A+   L S+V+TD   QG LCM   QL+ELR    S++S     +RT++P 
Sbjct: 262 RHYLLQPIIAEHKTLDSLVLTDVDGQGVLCMNRDQLEELRVKPLSASSAS---KRTLVPA 321

Query: 334 LHMKMWHVPVLDLPASGSVMTAATLVVIRPSSAGMALDGLDKMGDEFDAEETEKHGAYGE 383
           L+M++W+ P L+LP  G+V+  ATLV IRPS +   +  +  +   FD         YG 
Sbjct: 322 LNMRLWYAPSLELP-DGTVLKGATLVAIRPSESKKEVCDVSWVSSAFDE-------PYGV 377

[Close]

BLAST of Carg25428 vs. TAIR10
Match: AT5G46170.1 (F-box family protein)

HSP 1 Score: 174.1 bits (440), Expect = 1.7e-43
Identity = 137/388 (35.31%), Postives = 206/388 (53.09%), Query Frame = 0


Query: 34  LDYFDLLPDAILHLIFNKLIDARSLIRCLAVSKRFASLILQSETVFLAIPRPVLD----- 93
           +D+FD LPD+IL L+FNK+ D ++L RC  VS+RF SL+ Q + V + +   + D     
Sbjct: 24  IDHFDHLPDSILLLVFNKIGDVKALGRCCVVSRRFHSLVPQVDNVVVRVDCVISDDDSSS 83

Query: 94  -SKRKSRVGRRSPPNSLIRFFVRKFVFTPFRFIRRVITRTSTPSSGF------------- 153
            S  KSR G  +   S I   V   +  P + + + +                       
Sbjct: 84  LSSIKSRSGSSAGSFSAIFRLVVGGIVKPLQALGQFLGTKRXXXXXXXXXXXXXXXXXXX 143

Query: 154 ----------GDWYYWPSVALKEFRGIKFVHMELPCCGDEIGSIHGGGPLLKWKAEFGAE 213
                     G  ++ P+  LK F  I+++ +ELP    E+G     G LLKW+AEFG+ 
Sbjct: 144 XXXXXXIEQGGVTHHSPTQVLKNFDEIRYLRIELP--SGELGI--DDGVLLKWRAEFGST 203

Query: 214 LKSCVVLGASSLRRKSIVHSDSEAKETEEERVVEADS----------ETELGDEELKLRI 273
           L +CV+LGASS+   + +   S+A +T    VVEA            E+   +  LKLR+
Sbjct: 204 LDNCVILGASSVIPPNPMRV-SQACDT--TTVVEAPGSGSDDNGSIPESFYTNGGLKLRV 263

Query: 274 VWTISSLIAASMRHYLVKQMVADFPMLQSVVITDSTKQGRLCMEEKQLKELRDSMKSSTS 333
           VWTISSLIAAS RHYL++ ++A+   L S+V+TDS  QG LCM   QL+ELR    +++S
Sbjct: 264 VWTISSLIAASARHYLLQPIIAEHKTLDSLVLTDSDGQGVLCMNRDQLEELRVKPLAASS 323

Query: 334 NQSPVERTVIPDLHMKMWHVPVLDLPASGSVMTAATLVVIRPSSAGMALDGLDKMGDEFD 383
                +RT++P L+M++W+ P L+LP  G+V+  ATLV IRPS +   +  +  +   F+
Sbjct: 324 AS---KRTLVPALNMRLWYAPTLELP-DGTVLKGATLVAIRPSESKKEVSDISWVSSAFE 383

[Close]

BLAST of Carg25428 vs. TAIR10
Match: AT1G30200.2 (F-box family protein)

HSP 1 Score: 166.4 bits (420), Expect = 3.5e-41
Identity = 126/373 (33.78%), Postives = 194/373 (52.01%), Query Frame = 0


Query: 35  DYFDLLPDAILHLIFNKLIDARSLIRCLAVSKRFASLILQSETVFLAIPRPVLDSKRKS- 94
           D+FDLLPD++L LIF+K+ D + L RC  VS+RF SL+   E V + +   + D    S 
Sbjct: 24  DHFDLLPDSLLLLIFDKVADVKDLGRCCIVSRRFHSLVPFVENVLVRVDCVISDDDSSSS 83

Query: 95  --------RVGRRSPPNSLIRFFVRKF----------------VFTPFRFIRRVITRTST 154
                        S        F   F                   P R         S 
Sbjct: 84  DENHRFSLNTASISDAGGAGGSFSALFXXXXXXXXXXXXXXXXXXXPKRSSSSFDASFSA 143

Query: 155 PSSGFGDWYYWPSVALKEFRGIKFVHMELPCCGDEIGSIHGGGPLLKWKAEFGAELKSCV 214
            +   G  ++ P+  LK F  I+F+ +ELP    E+G     G LLKW+A+FG+ L +C+
Sbjct: 144 INDEIGVTHHSPTQVLKNFGEIRFLKIELPT--GELGI--EDGILLKWRADFGSTLDNCM 203

Query: 215 VLGASSLRRKSIVHSDSEAKETEEERVVEADSETELGDEELKLRIVWTISSLIAASMRHY 274
           +LGASS+ + + V +   + + +   +     E+   +  LKLR+VWTISSLIAAS RHY
Sbjct: 204 ILGASSVIQSNSVKNHENSVDEDNGNI----PESFYTNGGLKLRVVWTISSLIAASARHY 263

Query: 275 LVKQMVADFPMLQSVVITDSTKQGRLCMEEKQLKELRDSMKSSTSNQSPVERTVIPDLHM 334
           L++ ++ +   L  +V++D+  QG LCM  +QL+ELR +  S++S     +RT++P L+M
Sbjct: 264 LLQPIINEHKSLDRLVLSDADGQGVLCMNREQLEELRVTPLSASSAS---KRTLVPALNM 323

Query: 335 KMWHVPVLDLPASGSVMTAATLVVIRPSSAGMALDGLDKMGDEFDAEETEKHGAYGEAAR 383
           ++W+ P LDLP  G+V+  ATLV IRPS +   +     + D F+         +G  A+
Sbjct: 324 RLWYAPELDLP-DGTVLKGATLVAIRPSESKKEVCDASWLSDAFEE-------PFGTVAK 376

[Close]

BLAST of Carg25428 vs. TAIR10
Match: AT1G78100.1 (F-box family protein)

HSP 1 Score: 149.4 bits (376), Expect = 4.4e-36
Identity = 114/352 (32.39%), Postives = 185/352 (52.56%), Query Frame = 0


Query: 34  LDYFDLLPDAILHLIFNKLIDARSLIRCLAVSKRFASLILQSETVFLAIPRPVLDSKRKS 93
           +D FD +PD ++  I N++ D ++LIRC +VSKRF SL  QSE++ L + + +  ++  S
Sbjct: 1   MDAFDAIPDPVVIDILNRVGDVKTLIRCRSVSKRFNSLATQSESLLLQLDQILGATESDS 60

Query: 94  RVGRRSPPNSLIRFFVRKFVFTPFRFIRRVITRTSTPSSGFGDWYYWPSVALKEFRGIKF 153
            +      +S I  F R    +    +  + ++ +            P+  L  F  I+ 
Sbjct: 61  EI------DSPIASFFRSLFKSIHGLLPPIFSKPANSDEILTRSPKTPAQILSGFERIRN 120

Query: 154 VHMELPCCGDEIGSIHGG------GPLLKWKAEFGAELKSCVVLGASSLRRKSIVHSDSE 213
           + +EL          +GG      G  +KWKAEFG  LKSCV++   + R  ++  S + 
Sbjct: 121 LEVEL----------YGGDVKLEKGAAVKWKAEFGKTLKSCVIV---AFRSATVNTSAAT 180

Query: 214 AKETEEERVVEADSETELGDEELKLRIVWTISSLIAASMRHYLVKQMVADFPMLQSVVIT 273
                 + VVE+DSE   G   LK R+VWTIS+L+AAS RHYL++ +V D   ++ +++ 
Sbjct: 181 EAAAVVDGVVESDSEFVCG---LKTRVVWTISALMAASTRHYLMRDLVKDHKEMEKLIVR 240

Query: 274 DSTKQGRLCMEEKQLKELRDSMKSSTSNQSP--VERTVIPDLHMKMWHVPVLDLPASGSV 333
           DS  +G + M+   +KE R++     + +S    ERTV+P + M M H P L L  SG  
Sbjct: 241 DSDGEGTVVMDAAGMKEYRETEVRGDNKESERVGERTVVPSVRMSMRHAPSLML-KSGIC 300

Query: 334 MTAATLVVIRPSSAGMALDGLDKMGDEFDAEETEKHGAYGEAARKLMKLKRN 378
           + AATLVV+RP+      + ++ + + F  +  +    YGEA   L+K +RN
Sbjct: 301 LEAATLVVVRPTGVASDDNDVELVTEAFAGDGDD--CMYGEAVTALLKRRRN 327

[Close]

BLAST of Carg25428 vs. TAIR10
Match: AT1G22220.1 (F-box family protein)

HSP 1 Score: 149.1 bits (375), Expect = 5.7e-36
Identity = 121/348 (34.77%), Postives = 181/348 (52.01%), Query Frame = 0


Query: 34  LDYFDLLPDAILHLIFNKLIDARSLIRCLAVSKRFASLILQSETVFLAIPRPVLDSKRKS 93
           +D FD LPD I+  I NK+ D ++L+RC ++SKRF SL+ QSE++ L +   V DS   +
Sbjct: 1   MDVFDGLPDPIIVDILNKVGDVKTLLRCSSLSKRFNSLVPQSESLTLRLDHSVSDSPVVT 60

Query: 94  RVGRRSPPNSLIRFFVRKFVFTPFRFIRRVITRTSTPSSGFGDWYYWPSVALKEFRGIKF 153
            +  RS  N L+    +          + +   T +PS         P   L  F  I+ 
Sbjct: 61  SI-FRSLFNGLVSLLSKP--------AKPITITTLSPS--------LPFKILSRFDRIRN 120

Query: 154 VHMELPCCGDEIGSIHGGGPLLKWKAEFGAELKSCVVLGASSLRRKSIVHSDSEAKETEE 213
           + +ELP  G ++    G    +KWKAEFG  LKSCV++   S            A     
Sbjct: 121 LDVELP--GGDVKLEKGAA--VKWKAEFGKTLKSCVIVAFRS------------AGTVSS 180

Query: 214 ERVVEADSETELGDEELKLRIVWTISSLIAASMRHYLVKQMVADFPMLQSVVITDSTKQG 273
              VE +S+ E     LK R+VWTIS+L+AAS RHYL++++V +   ++S+V+ D  ++G
Sbjct: 181 PVAVEGESDAEF-VTGLKTRVVWTISALMAASSRHYLMREVVKEHEEIESLVMRDKEREG 240

Query: 274 RLCMEEKQLKELRDSMKSSTSNQSPV--ERTVIPDLHMKMWHVPVLDLPASGSVMTAATL 333
            + M E+ LKELR++       +  V  +R+V+P + M M H P L L  SG  + +ATL
Sbjct: 241 TVVMNEEGLKELRNTEARVEDEERVVKNKRSVVPSVRMSMRHAPSLKL-KSGICLESATL 300

Query: 334 VVIRPSSAGMALDGLDKMGD--EFDAEETEKHGAYGEAARKLMKLKRN 378
           V++RPS A        ++GD  E   E       YGEA   L+K K+N
Sbjct: 301 VIVRPSGADF------EVGDDAELATEAFVGDCMYGEAVVALLKCKKN 307

[Close]

BLAST of Carg25428 vs. Swiss-Prot
Match: sp|O49508|FB237_ARATH (F-box protein At4g18380 OS=Arabidopsis thaliana OX=3702 GN=At4g18380 PE=2 SV=1)

HSP 1 Score: 194.5 bits (493), Expect = 2.1e-48
Identity = 143/376 (38.03%), Postives = 209/376 (55.59%), Query Frame = 0


Query: 34  LDYFDLLPDAILHLIFNKLIDARSLIRCLAVSKRFASLILQSETVFLAIPRPVLDSKRKS 93
           +D+FD LPD+IL LIFN + D ++L RC  VSKRF SLI Q E VF+ +   + D    S
Sbjct: 22  IDHFDNLPDSILLLIFNNIGDVKALGRCSVVSKRFHSLIPQVENVFVRVDCVISDDDSSS 81

Query: 94  RVGRRSPPNSLIRFF--VRKFVFTPFRFIRRVITRT--------STPSSGF--------- 153
            +  +    S    F  + + VF P + + + + R+        S+PSS           
Sbjct: 82  LLSDKPRSASAASPFSAIFRLVFKPLQALGQFLKRSGSSSLPSGSSPSSLLISGGDDGEI 141

Query: 154 ---GDWYYWPSVALKEFRGIKFVHMELPCCGDEIGSIHGGGPLLKWKAEFGAELKSCVVL 213
              G  ++ P+  LK F  IKF+ +ELP    E+G     G LLKW+AEFG+ L++CV+L
Sbjct: 142 EQGGVTHHSPTQVLKNFDEIKFLKIELP--SGELGI--DDGVLLKWRAEFGSTLENCVIL 201

Query: 214 GASSLRRKSIVHSDSEAKETEEERVVEADSETELGDE-----ELKLRIVWTISSLIAASM 273
           GASS+    I  ++S+  E     V   +    + +       LKLR+VWTISSLIAAS 
Sbjct: 202 GASSV----IPPTNSDKTEASSAPVAAVEDNGSIPESFYTNGGLKLRVVWTISSLIAASA 261

Query: 274 RHYLVKQMVADFPMLQSVVITDSTKQGRLCMEEKQLKELRDSMKSSTSNQSPVERTVIPD 333
           RHYL++ ++A+   L S+V+TD   QG LCM   QL+ELR    S++S     +RT++P 
Sbjct: 262 RHYLLQPIIAEHKTLDSLVLTDVDGQGVLCMNRDQLEELRVKPLSASSAS---KRTLVPA 321

Query: 334 LHMKMWHVPVLDLPASGSVMTAATLVVIRPSSAGMALDGLDKMGDEFDAEETEKHGAYGE 383
           L+M++W+ P L+LP  G+V+  ATLV IRPS +   +  +  +   FD         YG 
Sbjct: 322 LNMRLWYAPSLELP-DGTVLKGATLVAIRPSESKKEVCDVSWVSSAFDE-------PYGV 377

[Close]

BLAST of Carg25428 vs. Swiss-Prot
Match: sp|Q9FNK5|FB285_ARATH (F-box protein At5g46170 OS=Arabidopsis thaliana OX=3702 GN=At5g46170 PE=2 SV=1)

HSP 1 Score: 174.1 bits (440), Expect = 3.0e-42
Identity = 137/388 (35.31%), Postives = 206/388 (53.09%), Query Frame = 0


Query: 34  LDYFDLLPDAILHLIFNKLIDARSLIRCLAVSKRFASLILQSETVFLAIPRPVLD----- 93
           +D+FD LPD+IL L+FNK+ D ++L RC  VS+RF SL+ Q + V + +   + D     
Sbjct: 24  IDHFDHLPDSILLLVFNKIGDVKALGRCCVVSRRFHSLVPQVDNVVVRVDCVISDDDSSS 83

Query: 94  -SKRKSRVGRRSPPNSLIRFFVRKFVFTPFRFIRRVITRTSTPSSGF------------- 153
            S  KSR G  +   S I   V   +  P + + + +                       
Sbjct: 84  LSSIKSRSGSSAGSFSAIFRLVVGGIVKPLQALGQFLGTKRXXXXXXXXXXXXXXXXXXX 143

Query: 154 ----------GDWYYWPSVALKEFRGIKFVHMELPCCGDEIGSIHGGGPLLKWKAEFGAE 213
                     G  ++ P+  LK F  I+++ +ELP    E+G     G LLKW+AEFG+ 
Sbjct: 144 XXXXXXIEQGGVTHHSPTQVLKNFDEIRYLRIELP--SGELGI--DDGVLLKWRAEFGST 203

Query: 214 LKSCVVLGASSLRRKSIVHSDSEAKETEEERVVEADS----------ETELGDEELKLRI 273
           L +CV+LGASS+   + +   S+A +T    VVEA            E+   +  LKLR+
Sbjct: 204 LDNCVILGASSVIPPNPMRV-SQACDT--TTVVEAPGSGSDDNGSIPESFYTNGGLKLRV 263

Query: 274 VWTISSLIAASMRHYLVKQMVADFPMLQSVVITDSTKQGRLCMEEKQLKELRDSMKSSTS 333
           VWTISSLIAAS RHYL++ ++A+   L S+V+TDS  QG LCM   QL+ELR    +++S
Sbjct: 264 VWTISSLIAASARHYLLQPIIAEHKTLDSLVLTDSDGQGVLCMNRDQLEELRVKPLAASS 323

Query: 334 NQSPVERTVIPDLHMKMWHVPVLDLPASGSVMTAATLVVIRPSSAGMALDGLDKMGDEFD 383
                +RT++P L+M++W+ P L+LP  G+V+  ATLV IRPS +   +  +  +   F+
Sbjct: 324 AS---KRTLVPALNMRLWYAPTLELP-DGTVLKGATLVAIRPSESKKEVSDISWVSSAFE 383

[Close]

BLAST of Carg25428 vs. Swiss-Prot
Match: sp|Q9C534|FB19_ARATH (F-box protein At1g30200 OS=Arabidopsis thaliana OX=3702 GN=At1g30200 PE=2 SV=1)

HSP 1 Score: 166.4 bits (420), Expect = 6.2e-40
Identity = 126/373 (33.78%), Postives = 194/373 (52.01%), Query Frame = 0


Query: 35  DYFDLLPDAILHLIFNKLIDARSLIRCLAVSKRFASLILQSETVFLAIPRPVLDSKRKS- 94
           D+FDLLPD++L LIF+K+ D + L RC  VS+RF SL+   E V + +   + D    S 
Sbjct: 24  DHFDLLPDSLLLLIFDKVADVKDLGRCCIVSRRFHSLVPFVENVLVRVDCVISDDDSSSS 83

Query: 95  --------RVGRRSPPNSLIRFFVRKF----------------VFTPFRFIRRVITRTST 154
                        S        F   F                   P R         S 
Sbjct: 84  DENHRFSLNTASISDAGGAGGSFSALFXXXXXXXXXXXXXXXXXXXPKRSSSSFDASFSA 143

Query: 155 PSSGFGDWYYWPSVALKEFRGIKFVHMELPCCGDEIGSIHGGGPLLKWKAEFGAELKSCV 214
            +   G  ++ P+  LK F  I+F+ +ELP    E+G     G LLKW+A+FG+ L +C+
Sbjct: 144 INDEIGVTHHSPTQVLKNFGEIRFLKIELPT--GELGI--EDGILLKWRADFGSTLDNCM 203

Query: 215 VLGASSLRRKSIVHSDSEAKETEEERVVEADSETELGDEELKLRIVWTISSLIAASMRHY 274
           +LGASS+ + + V +   + + +   +     E+   +  LKLR+VWTISSLIAAS RHY
Sbjct: 204 ILGASSVIQSNSVKNHENSVDEDNGNI----PESFYTNGGLKLRVVWTISSLIAASARHY 263

Query: 275 LVKQMVADFPMLQSVVITDSTKQGRLCMEEKQLKELRDSMKSSTSNQSPVERTVIPDLHM 334
           L++ ++ +   L  +V++D+  QG LCM  +QL+ELR +  S++S     +RT++P L+M
Sbjct: 264 LLQPIINEHKSLDRLVLSDADGQGVLCMNREQLEELRVTPLSASSAS---KRTLVPALNM 323

Query: 335 KMWHVPVLDLPASGSVMTAATLVVIRPSSAGMALDGLDKMGDEFDAEETEKHGAYGEAAR 383
           ++W+ P LDLP  G+V+  ATLV IRPS +   +     + D F+         +G  A+
Sbjct: 324 RLWYAPELDLP-DGTVLKGATLVAIRPSESKKEVCDASWLSDAFEE-------PFGTVAK 376

[Close]

BLAST of Carg25428 vs. Swiss-Prot
Match: sp|Q9C9S2|FB91_ARATH (F-box protein At1g78100 OS=Arabidopsis thaliana OX=3702 GN=At1g78100 PE=1 SV=1)

HSP 1 Score: 149.4 bits (376), Expect = 7.9e-35
Identity = 114/352 (32.39%), Postives = 185/352 (52.56%), Query Frame = 0


Query: 34  LDYFDLLPDAILHLIFNKLIDARSLIRCLAVSKRFASLILQSETVFLAIPRPVLDSKRKS 93
           +D FD +PD ++  I N++ D ++LIRC +VSKRF SL  QSE++ L + + +  ++  S
Sbjct: 1   MDAFDAIPDPVVIDILNRVGDVKTLIRCRSVSKRFNSLATQSESLLLQLDQILGATESDS 60

Query: 94  RVGRRSPPNSLIRFFVRKFVFTPFRFIRRVITRTSTPSSGFGDWYYWPSVALKEFRGIKF 153
            +      +S I  F R    +    +  + ++ +            P+  L  F  I+ 
Sbjct: 61  EI------DSPIASFFRSLFKSIHGLLPPIFSKPANSDEILTRSPKTPAQILSGFERIRN 120

Query: 154 VHMELPCCGDEIGSIHGG------GPLLKWKAEFGAELKSCVVLGASSLRRKSIVHSDSE 213
           + +EL          +GG      G  +KWKAEFG  LKSCV++   + R  ++  S + 
Sbjct: 121 LEVEL----------YGGDVKLEKGAAVKWKAEFGKTLKSCVIV---AFRSATVNTSAAT 180

Query: 214 AKETEEERVVEADSETELGDEELKLRIVWTISSLIAASMRHYLVKQMVADFPMLQSVVIT 273
                 + VVE+DSE   G   LK R+VWTIS+L+AAS RHYL++ +V D   ++ +++ 
Sbjct: 181 EAAAVVDGVVESDSEFVCG---LKTRVVWTISALMAASTRHYLMRDLVKDHKEMEKLIVR 240

Query: 274 DSTKQGRLCMEEKQLKELRDSMKSSTSNQSP--VERTVIPDLHMKMWHVPVLDLPASGSV 333
           DS  +G + M+   +KE R++     + +S    ERTV+P + M M H P L L  SG  
Sbjct: 241 DSDGEGTVVMDAAGMKEYRETEVRGDNKESERVGERTVVPSVRMSMRHAPSLML-KSGIC 300

Query: 334 MTAATLVVIRPSSAGMALDGLDKMGDEFDAEETEKHGAYGEAARKLMKLKRN 378
           + AATLVV+RP+      + ++ + + F  +  +    YGEA   L+K +RN
Sbjct: 301 LEAATLVVVRPTGVASDDNDVELVTEAFAGDGDD--CMYGEAVTALLKRRRN 327

[Close]

BLAST of Carg25428 vs. Swiss-Prot
Match: sp|Q9LM18|FB303_ARATH (F-box protein At1g22220 OS=Arabidopsis thaliana OX=3702 GN=At1g22220 PE=2 SV=1)

HSP 1 Score: 149.1 bits (375), Expect = 1.0e-34
Identity = 121/348 (34.77%), Postives = 181/348 (52.01%), Query Frame = 0


Query: 34  LDYFDLLPDAILHLIFNKLIDARSLIRCLAVSKRFASLILQSETVFLAIPRPVLDSKRKS 93
           +D FD LPD I+  I NK+ D ++L+RC ++SKRF SL+ QSE++ L +   V DS   +
Sbjct: 1   MDVFDGLPDPIIVDILNKVGDVKTLLRCSSLSKRFNSLVPQSESLTLRLDHSVSDSPVVT 60

Query: 94  RVGRRSPPNSLIRFFVRKFVFTPFRFIRRVITRTSTPSSGFGDWYYWPSVALKEFRGIKF 153
            +  RS  N L+    +          + +   T +PS         P   L  F  I+ 
Sbjct: 61  SI-FRSLFNGLVSLLSKP--------AKPITITTLSPS--------LPFKILSRFDRIRN 120

Query: 154 VHMELPCCGDEIGSIHGGGPLLKWKAEFGAELKSCVVLGASSLRRKSIVHSDSEAKETEE 213
           + +ELP  G ++    G    +KWKAEFG  LKSCV++   S            A     
Sbjct: 121 LDVELP--GGDVKLEKGAA--VKWKAEFGKTLKSCVIVAFRS------------AGTVSS 180

Query: 214 ERVVEADSETELGDEELKLRIVWTISSLIAASMRHYLVKQMVADFPMLQSVVITDSTKQG 273
              VE +S+ E     LK R+VWTIS+L+AAS RHYL++++V +   ++S+V+ D  ++G
Sbjct: 181 PVAVEGESDAEF-VTGLKTRVVWTISALMAASSRHYLMREVVKEHEEIESLVMRDKEREG 240

Query: 274 RLCMEEKQLKELRDSMKSSTSNQSPV--ERTVIPDLHMKMWHVPVLDLPASGSVMTAATL 333
            + M E+ LKELR++       +  V  +R+V+P + M M H P L L  SG  + +ATL
Sbjct: 241 TVVMNEEGLKELRNTEARVEDEERVVKNKRSVVPSVRMSMRHAPSLKL-KSGICLESATL 300

Query: 334 VVIRPSSAGMALDGLDKMGD--EFDAEETEKHGAYGEAARKLMKLKRN 378
           V++RPS A        ++GD  E   E       YGEA   L+K K+N
Sbjct: 301 VIVRPSGADF------EVGDDAELATEAFVGDCMYGEAVVALLKCKKN 307

[Close]

BLAST of Carg25428 vs. TrEMBL
Match: tr|A0A1S3BP50|A0A1S3BP50_CUCME (F-box protein At4g18380-like OS=Cucumis melo OX=3656 GN=LOC103491999 PE=4 SV=1)

HSP 1 Score: 467.6 bits (1202), Expect = 2.6e-128
Identity = 245/349 (70.20%), Postives = 290/349 (83.09%), Query Frame = 0


Query: 35  DYFDLLPDAILHLIFNKLIDARSLIRCLAVSKRFASLILQSETVFLAIPRPVLDSKRKSR 94
           D+FDLLPD+ILHLIF KL  A SLIRCL VSKRFASLI QS++VFL+IP  +L    KSR
Sbjct: 24  DFFDLLPDSILHLIFTKLTHAPSLIRCLTVSKRFASLISQSDSVFLSIPPLLLTPNPKSR 83

Query: 95  VGRRSPPNSLIRFFVRKFVFTPFRFIRRVITRTSTPSSGFGDWYYWPSVALKEFRGIKFV 154
               +PP+  +RFF RKF+F PFRFIRR+IT TS  +S F DWYYWPSVALKE +G+K +
Sbjct: 84  T---TPPS--LRFFFRKFLFNPFRFIRRLITHTSQSTSRFSDWYYWPSVALKELKGLKSL 143

Query: 155 HMELPCCGDEIGSIHGGGPLLKWKAEFGAELKSCVVLGASSLRRKSIVHSD-SEAKETEE 214
           H+ELPCCGDEIGS H GG LLKWKAEFG++LK+CVVLGASSLRRKS+V S+ SE K   E
Sbjct: 144 HIELPCCGDEIGSNHNGGALLKWKAEFGSQLKTCVVLGASSLRRKSVVESESSEVKAETE 203

Query: 215 ERVVEADSETELGDEELKLRIVWTISSLIAASMRHYLVKQMVADFPMLQSVVITDSTKQG 274
           E  + ++SE+E+GD ELK RIVWTISSLIAASMRHYLVKQMV DFP+L++V+ITDS KQG
Sbjct: 204 ENRLHSESESEMGDGELKSRIVWTISSLIAASMRHYLVKQMVNDFPLLKTVLITDSAKQG 263

Query: 275 RLCMEEKQLKELRDSMKSSTSNQSPVERTVIPDLHMKMWHVPVLDLPASGSVMTAATLVV 334
           RLCMEE+++ ELR+SMK S+S  S VER+VIPDL MKMW+VPVLDL A+G VMTAATLVV
Sbjct: 264 RLCMEEEEVMELRESMKLSSS--SCVERSVIPDLKMKMWYVPVLDLAAAGFVMTAATLVV 323

Query: 335 IRPSSAGMALDGLDKMGDEFDAEETEKHGAYGEAARKLMKLKRNYTLEI 383
           I+PS  GM LDGL+++GDEFD+E+ EK G YGEA RKLMKLKRNY LE+
Sbjct: 324 IKPSGGGMGLDGLERIGDEFDSEDGEKFGVYGEAVRKLMKLKRNYALEV 365

[Close]

BLAST of Carg25428 vs. TrEMBL
Match: tr|A0A0A0M086|A0A0A0M086_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G617380 PE=4 SV=1)

HSP 1 Score: 464.5 bits (1194), Expect = 2.2e-127
Identity = 245/349 (70.20%), Postives = 286/349 (81.95%), Query Frame = 0


Query: 35  DYFDLLPDAILHLIFNKLIDARSLIRCLAVSKRFASLILQSETVFLAIPRPVLDSKRKSR 94
           D FDLLPD+ILHLIF KL  A SLIRCLAVSKRFASLI QS++VFL+IP  +L    KSR
Sbjct: 10  DLFDLLPDSILHLIFTKLTHAPSLIRCLAVSKRFASLIPQSDSVFLSIPPLLLTPNPKSR 69

Query: 95  VGRRSPPNSLIRFFVRKFVFTPFRFIRRVITRTSTPSSGFGDWYYWPSVALKEFRGIKFV 154
              RSP      FF+RKF F PFRFIRR+IT TS  +  F DWYYWPSVALKE +G + +
Sbjct: 70  TTPRSP-----TFFLRKFFFNPFRFIRRLITHTSQSTPRFTDWYYWPSVALKELKGFQSL 129

Query: 155 HMELPCCGDEIGSIHGGGPLLKWKAEFGAELKSCVVLGASSLRRKSIVHSDSEA-KETEE 214
           H++LPCCGDEIGS H GG LLKWKAEFG+ELK+CVVLGASSLRRKS+V S+S A KE  E
Sbjct: 130 HIQLPCCGDEIGSNHNGGALLKWKAEFGSELKTCVVLGASSLRRKSVVESESSAVKEETE 189

Query: 215 ERVVEADSETELGDEELKLRIVWTISSLIAASMRHYLVKQMVADFPMLQSVVITDSTKQG 274
           E  + A+SE+E+GD ELK RIVWTISSLIAASMRHYLVKQMV DFP+L++V+ITDS KQG
Sbjct: 190 ENRLHAESESEMGDGELKSRIVWTISSLIAASMRHYLVKQMVNDFPLLKTVLITDSAKQG 249

Query: 275 RLCMEEKQLKELRDSMKSSTSNQSPVERTVIPDLHMKMWHVPVLDLPASGSVMTAATLVV 334
           RLCMEE+++ ELR+SM+ S+S  S VER+VIPDL MKMW+VPVLDLP +G VMTAATLVV
Sbjct: 250 RLCMEEEEVMELRESMQLSSS--SYVERSVIPDLKMKMWYVPVLDLPEAGFVMTAATLVV 309

Query: 335 IRPSSAGMALDGLDKMGDEFDAEETEKHGAYGEAARKLMKLKRNYTLEI 383
           I+PS  GM LDGL+++GDEFD+E+ EK G YGEA RKLMKLKRNY LE+
Sbjct: 310 IKPSGGGMGLDGLERIGDEFDSEDGEKFGVYGEAVRKLMKLKRNYALEV 351

[Close]

BLAST of Carg25428 vs. TrEMBL
Match: tr|A0A2N9J605|A0A2N9J605_FAGSY (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS60749 PE=4 SV=1)

HSP 1 Score: 283.5 bits (724), Expect = 7.1e-73
Identity = 164/357 (45.94%), Postives = 234/357 (65.55%), Query Frame = 0


Query: 35  DYFDLLPDAILHLIFNKLIDARSLIRCLAVSKRFASLILQSETVFLAIPRPVLDSKRKSR 94
           D+FD LPD +L  IFNKL+DA+SL RCL VSKRFAS I Q ++VFL +PR V + KRK  
Sbjct: 7   DHFDCLPDELLLFIFNKLLDAKSLTRCLLVSKRFASFIPQIDSVFLPLPRHVRNRKRKHG 66

Query: 95  VGRRSPPNSLIRFFVRKFVFTPFRFIRRVITRTSTPSSGFGDW-YYWPSVALKEFRGIKF 154
           +     P  + +  V   +  P + + +++      +S F  + YY P   LK F G+K 
Sbjct: 67  L-----PIKVFKILVSNLIIKPMQVLHKLMFNKPATNSNFDHFLYYSPKEVLKNFNGLKA 126

Query: 155 VHMELPCCGDEIGSIHGGGPLLKWKAEFGAELKSCVVLGASSLRRKSIVHSDSEAKETEE 214
           +H+ELPC   E+    G   LLKWKAEFG ELKSC++L A+S  R+S+  S +   E +E
Sbjct: 127 LHLELPCLDSEMEFNVGSCSLLKWKAEFGEELKSCIILSATSFHRESLSSSSTYGNEGDE 186

Query: 215 ERVVEADSETELGDEELKLRIVWTISSLIAASMRHYLVKQMVADFPMLQSVVITDSTKQG 274
           E V + + ++ L ++ELKLRI+WTIS L++AS+RHYL+KQ+VA+FPMLQS+VITD+ K+G
Sbjct: 187 E-VQQQELQSFLDEDELKLRIIWTISCLVSASVRHYLLKQIVANFPMLQSMVITDARKRG 246

Query: 275 RLCMEEKQLKELRDSMKSST---SNQSPVERTVIPDLHMKMWHVPVLDLPASGSVMTAAT 334
           +LCM E QL ELR++M SS       + +ERT IP+L M + +VP + LP SG VM   T
Sbjct: 247 KLCMGEDQLVELRNTMNSSAGTLEESNSLERTPIPNLSMNLRYVPEMQLPVSGYVMKEVT 306

Query: 335 LVVIRPSSAGMAL-----DGLDKMGDEFDAEETEKHGAYGEAARKLMKLKRNYTLEI 383
           LVVI+P  +G+ +     DG D +  +FD E+ E+   +GEA R+++K K +Y +E+
Sbjct: 307 LVVIKPVVSGVEMGEGVSDG-DLLVGDFDGED-EETMVFGEAVREMVKRKTSYVMEM 355

[Close]

BLAST of Carg25428 vs. TrEMBL
Match: tr|A0A2P5FIN8|A0A2P5FIN8_9ROSA (F-box domain containing protein OS=Trema orientalis OX=63057 GN=TorRG33x02_065430 PE=4 SV=1)

HSP 1 Score: 279.3 bits (713), Expect = 1.3e-71
Identity = 160/357 (44.82%), Postives = 236/357 (66.11%), Query Frame = 0


Query: 36  YFDLLPDAILHLIFNKLIDARSLIRCLAVSKRFASLILQSETVFLAIPRPVLDSKRKSRV 95
           YFD LPDAIL +IFNK++DA+SL+RC +VSKRF SLI Q E +FL +PR +   K  S  
Sbjct: 35  YFDHLPDAILLVIFNKILDAKSLVRCRSVSKRFNSLIPQVEAIFLPLPRKIPLRKPTSNT 94

Query: 96  GRRSPPNSLIRFFVRKFVFTPFRFIRRVIT-RTSTPSSGFGDWYYWPSVALKEFRGIKFV 155
                  +L+  F+ K +    RF++ +++     P +     YY P+ ALK F+ +K +
Sbjct: 95  LSAKHFKNLLNNFIPKSI----RFLQSIVSINKPRPKNARDLLYYSPNEALKGFKEMKSL 154

Query: 156 HMELPCCGDEIGSIHGGGPLLKWKAEFGAELKSCVVLGASSLRRKSIVHSDSEAKETEEE 215
           H+ELPC   E+G        +KWKAEFG  L+SCV+LGA+S++R+++  +D+  KE +  
Sbjct: 155 HLELPCPSGEVGLAGNDESFVKWKAEFGTNLQSCVILGANSIQRETLPKNDNLNKENDNR 214

Query: 216 RVVEADSETELGDEELKLRIVWTISSLIAASMRHYLVKQMVADFPMLQSVVITDSTKQGR 275
               A  +  L D+ELK+RIVW ISSLIAAS RHYL+K+++ADFP L++VVI+D  K+G+
Sbjct: 215 NCESA--QPVLADQELKMRIVWMISSLIAASARHYLLKRIIADFPDLRNVVISDENKRGK 274

Query: 276 LCMEEKQLKELRDSM---KSSTSNQSPVERTVIPDLHMKMWHVPVLDLPASGSVMTAATL 335
           L + E++L ELR +    +SS + +S +ER++IPDL MK+W+VP L+LP SG V+  ATL
Sbjct: 275 LYVGEEKLAELRTNSGNDESSVALESSLERSIIPDLGMKLWYVPQLELPGSGCVIKGATL 334

Query: 336 VVIRPSSAGM------ALDGLDKMGDEFDAEETEKHGAYGEAARKLMKLKRNYTLEI 383
           VVIRP   G+      ++D  D +GD FD  E E++   GEA R+++K+K+ Y +E+
Sbjct: 335 VVIRPLDHGVMNGKKGSMDDGDLLGDGFDGNE-EENAILGEAVREMIKMKKTYVMEM 384

[Close]

BLAST of Carg25428 vs. TrEMBL
Match: tr|A0A2P5DR87|A0A2P5DR87_PARAD (F-box domain containing protein OS=Parasponia andersonii OX=3476 GN=PanWU01x14_040520 PE=4 SV=1)

HSP 1 Score: 269.2 bits (687), Expect = 1.4e-68
Identity = 159/357 (44.54%), Postives = 231/357 (64.71%), Query Frame = 0


Query: 36  YFDLLPDAILHLIFNKLIDARSLIRCLAVSKRFASLILQSETVFLAIPRPVLDSKRKSRV 95
           YFD LPDAIL +IFNK++DA+SL+RC +VSKRF SLI Q E + L + R +   K  S  
Sbjct: 35  YFDHLPDAILLVIFNKILDAKSLVRCRSVSKRFNSLIPQVEAICLPLLRKIPPRKPTSNT 94

Query: 96  GRRSPPNSLIRFFVRKFVFTPFRFIRRVIT-RTSTPSSGFGDWYYWPSVALKEFRGIKFV 155
                  +L+  F+ K +    RF+ R+++     P +     YY P+ AL+ F+ +K +
Sbjct: 95  LSAKHFKNLLNNFIPKSI----RFLHRIVSINKPRPKNARNLLYYSPNEALEGFKEMKSL 154

Query: 156 HMELPCCGDEIGSIHGGGPLLKWKAEFGAELKSCVVLGASSLRRKSIVHSDSEAKETEEE 215
           H+ELPC   E+G        +KWKAEFG  L+SCV+LGA+S++R+ +  +D+  KE+   
Sbjct: 155 HLELPCPNGEVGLAGNDESFVKWKAEFGTNLQSCVILGANSIQREKLPKNDNLNKESGNR 214

Query: 216 RVVEADSETELGDEELKLRIVWTISSLIAASMRHYLVKQMVADFPMLQSVVITDSTKQGR 275
               A  +  L D+ELK RIVW ISSLIAAS RHYL+K+++A+FP L++VVI+D  K+G+
Sbjct: 215 NCESA--QPVLTDQELKTRIVWMISSLIAASARHYLLKRIIAEFPDLRNVVISDENKRGK 274

Query: 276 LCMEEKQLKELRDSM---KSSTSNQSPVERTVIPDLHMKMWHVPVLDLPASGSVMTAATL 335
           L M E+QL ELR +    +SS + +S +ER+VIPDL MK+W+VP L+LP SG V+  ATL
Sbjct: 275 LYMGEEQLAELRSNSGNNESSVALESSLERSVIPDLGMKLWYVPQLELPGSGCVIKGATL 334

Query: 336 VVIRPSSAGM------ALDGLDKMGDEFDAEETEKHGAYGEAARKLMKLKRNYTLEI 383
           VVI+P    +      A+D  D +G+ FD  E E++   GEA R+++KLK+ Y +E+
Sbjct: 335 VVIKPLDHELINGKKGAMDDGDLLGNGFDGNE-EENAILGEAVREMIKLKKTYVMEM 384

The following BLAST results are available for this feature:

BLAST of Carg25428 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022928580.1	7.4e-199	99.48	F-box protein At4g18380-like [Cucurbita moschata]	[more]
XP_023530591.1	1.5e-196	98.43	F-box protein At4g18380-like [Cucurbita pepo subsp. pepo]	[more]
XP_023004391.1	6.1e-193	97.66	F-box protein At4g18380-like [Cucurbita maxima]	[more]
XP_022154311.1	1.2e-145	78.22	F-box protein At4g18380-like [Momordica charantia]	[more]
XP_008450369.1	4.0e-128	70.20	PREDICTED: F-box protein At4g18380-like [Cucumis melo]	[more]

BLAST of Carg25428 vs. TAIR10


Match Name	E-value	Identity	Description
AT4G18380.1	1.2e-49	38.03	F-box family protein	[more]
AT5G46170.1	1.7e-43	35.31	F-box family protein	[more]
AT1G30200.2	3.5e-41	33.78	F-box family protein	[more]
AT1G78100.1	4.4e-36	32.39	F-box family protein	[more]
AT1G22220.1	5.7e-36	34.77	F-box family protein	[more]

BLAST of Carg25428 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|O49508\|FB237_ARATH	2.1e-48	38.03	F-box protein At4g18380 OS=Arabidopsis thaliana OX=3702 GN=At4g18380 PE=2 SV=1	[more]
sp\|Q9FNK5\|FB285_ARATH	3.0e-42	35.31	F-box protein At5g46170 OS=Arabidopsis thaliana OX=3702 GN=At5g46170 PE=2 SV=1	[more]
sp\|Q9C534\|FB19_ARATH	6.2e-40	33.78	F-box protein At1g30200 OS=Arabidopsis thaliana OX=3702 GN=At1g30200 PE=2 SV=1	[more]
sp\|Q9C9S2\|FB91_ARATH	7.9e-35	32.39	F-box protein At1g78100 OS=Arabidopsis thaliana OX=3702 GN=At1g78100 PE=1 SV=1	[more]
sp\|Q9LM18\|FB303_ARATH	1.0e-34	34.77	F-box protein At1g22220 OS=Arabidopsis thaliana OX=3702 GN=At1g22220 PE=2 SV=1	[more]

BLAST of Carg25428 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A1S3BP50\|A0A1S3BP50_CUCME	2.6e-128	70.20	F-box protein At4g18380-like OS=Cucumis melo OX=3656 GN=LOC103491999 PE=4 SV=1	[more]
tr\|A0A0A0M086\|A0A0A0M086_CUCSA	2.2e-127	70.20	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G617380 PE=4 SV=1	[more]
tr\|A0A2N9J605\|A0A2N9J605_FAGSY	7.1e-73	45.94	Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS60749 PE=4 SV=1	[more]
tr\|A0A2P5FIN8\|A0A2P5FIN8_9ROSA	1.3e-71	44.82	F-box domain containing protein OS=Trema orientalis OX=63057 GN=TorRG33x02_06543...	[more]
tr\|A0A2P5DR87\|A0A2P5DR87_PARAD	1.4e-68	44.54	F-box domain containing protein OS=Parasponia andersonii OX=3476 GN=PanWU01x14_0...	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Molecular Function**
Term	Definition
GO:0005515	protein binding

Vocabulary: **INTERPRO**
Term	Definition
IPR036047	F-box-like_dom_sf
IPR001810	F-box_dom

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0005515	protein binding

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg25428-RA	Carg25428-RA	mRNA

InterPro

Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	GENE3D	G3DSA:1.20.1280.50		coord: 34..78 e-value: 1.7E-6 score: 29.8
None	No IPR available	PANTHER	PTHR31215:SF12	SUBFAMILY NOT NAMED	coord: 32..382
None	No IPR available	PANTHER	PTHR31215	FAMILY NOT NAMED	coord: 32..382
IPR001810	F-box domain	PFAM	PF12937	F-box-like	coord: 39..74 e-value: 3.1E-6 score: 26.9
IPR036047	F-box-like domain superfamily	SUPERFAMILY	SSF81383	F-box domain	coord: 26..80

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Carg25428	Cla006335	Watermelon (97103) v1	carwmB0421
Carg25428	Csa1G617380	Cucumber (Chinese Long) v2	carcuB0457
Carg25428	MELO3C015149	Melon (DHL92) v3.5.1	carmeB0432
Carg25428	ClCG03G012870	Watermelon (Charleston Gray)	carwcgB0417
Carg25428	CSPI01G30720	Wild cucumber (PI 183967)	carcpiB0462
Carg25428	Cucsa.055390	Cucumber (Gy14) v1	carcgyB0491
Carg25428	CmaCh11G008690	Cucurbita maxima (Rimu)	carcmaB0590
Carg25428	Lsi06G005560	Bottle gourd (USVL1VR-Ls)	carlsiB385
Carg25428	CsGy1G030020	Cucumber (Gy14) v2	carcgybB0433
Carg25428	MELO3C015149.2	Melon (DHL92) v3.6.1	carmedB0434
Carg25428	CsaV3_1G043180	Cucumber (Chinese Long) v3	carcucB0458
Carg25428	Cla97C03G063120	Watermelon (97103) v2	carwmbB0448
Carg25428	Bhi02G001278	Wax gourd	carwgoB0510

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Carg25428	Cucurbita maxima (Rimu)	carcmaB0589
Carg25428	Cucurbita moschata (Rifu)	carcmoB0574
Carg25428	Cucurbita moschata (Rifu)	carcmoB0575
Carg25428	Cucurbita pepo (Zucchini)	carcpeB0595
Carg25428	Cucurbita pepo (Zucchini)	carcpeB0596