Carg25426 (gene) Silver-seed gourd | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Carg25426
Type	gene
Organism	Cucurbita argyrosperma (Silver-seed gourd)
Description	Protein of unknown function (DUF803)
Location	Cucurbita_argyrosperma_scaffold_300 : 58168 .. 58889 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGGTTTTGGTGAAGACAATCTGAATGGCGTTATTTTGGCTTTGCTCTCAAGTGGGTTCATTGGGGCAAGCTTTATTATCAAGAAAAAGGGGCTTAGAAGAGCAGCAGCAGCATCTGGGGTCAGAGCTGGTGAAGATTTTCATTATGAATGCACTTGATTTAGGCTTTTTTCTTTGTTGATTCTTCTGGGGCTTGTTTTGATTCAGATGGCCTTGTTTTTGTTCTTCGTTTTGCAGGTGTTGGTGGCTATACTTACCTCTTGGAGCCTCTATGGTGGATAGGCATGATTATAAGTAAGATATTCTTTCTTCCTCTCAAGGGGCTTCGATTGTTTTGCATTTAAGTTGTTCATATAATCATGGATTCTTACATGTTTTCTTATCTTGATTCTTGACTATGTTGAAATTGTGCTCCGTGTTCATGGATGAACTTAAATTTGGCTGATTCTTGCTTCAAAGTTCTAGTAATCTGCTGGACATGATTCATTTGCCCCTTTTGAATTCCATATTTGATCAATGTTCATATTGTCTGTAATCCAGTGATTGTTGGTGAGGCTGCCAACTTCATTGCTTATGCATTTGCCCCTGCAGTTCTCGTGACGCCGCTCGGTGCGTTAAGCATAATCGTCAGGTATTTCGTGTCTGCTATGCTTGCTCTTTCTCAATTATGTTTAGAAGTTATCTCCATGTTAGCTATCAGAGTTTTCTCTGATGTCCTCTGA

mRNA sequence

ATGGGTTTTGGTGAAGACAATCTGAATGGCGTTATTTTGGCTTTGCTCTCAAGTGGGTTCATTGGGGCAAGCTTTATTATCAAGAAAAAGGGGCTTAGAAGAGCAGCAGCAGCATCTGGGGTCAGAGCTGGTGTTGGTGGCTATACTTACCTCTTGGAGCCTCTATGGTGGATAGGCATGATTATAATGATTGTTGGTGAGGCTGCCAACTTCATTGCTTATGCATTTGCCCCTGCAGTTCTCGTGACGCCGCTCGGTGCGTTAAGCATAATCGTCAGGTATTTCGTGTCTGCTATGCTTGCTCTTTCTCAATTATGTTTAGAAGTTATCTCCATGTTAGCTATCAGAGTTTTCTCTGATGTCCTCTGA

Coding sequence (CDS)

ATGGGTTTTGGTGAAGACAATCTGAATGGCGTTATTTTGGCTTTGCTCTCAAGTGGGTTCATTGGGGCAAGCTTTATTATCAAGAAAAAGGGGCTTAGAAGAGCAGCAGCAGCATCTGGGGTCAGAGCTGGTGTTGGTGGCTATACTTACCTCTTGGAGCCTCTATGGTGGATAGGCATGATTATAATGATTGTTGGTGAGGCTGCCAACTTCATTGCTTATGCATTTGCCCCTGCAGTTCTCGTGACGCCGCTCGGTGCGTTAAGCATAATCGTCAGGTATTTCGTGTCTGCTATGCTTGCTCTTTCTCAATTATGTTTAGAAGTTATCTCCATGTTAGCTATCAGAGTTTTCTCTGATGTCCTCTGA

Protein sequence

MGFGEDNLNGVILALLSSGFIGASFIIKKKGLRRAAAASGVRAGVGGYTYLLEPLWWIGMIIMIVGEAANFIAYAFAPAVLVTPLGALSIIVRYFVSAMLALSQLCLEVISMLAIRVFSDVL

Homology

[Close]

BLAST of Carg25426 vs. NCBI nr
Match: XP_022928581.1 (probable magnesium transporter NIPA6 isoform X1 [Cucurbita moschata] >XP_023530894.1 probable magnesium transporter NIPA6 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 174.1 bits (440), Expect = 2.9e-40
Identity = 96/101 (95.05%), Postives = 97/101 (96.04%), Query Frame = 0


Query: 1   MGFGEDNLNGVILALLSSGFIGASFIIKKKGLRRAAAASGVRAGVGGYTYLLEPLWWIGM 60
           MGFGEDNLNGVILALLSSGFIGASFIIKKKGLRRAAAASGVRAGVGGYTYLLEPLWWIGM
Sbjct: 1   MGFGEDNLNGVILALLSSGFIGASFIIKKKGLRRAAAASGVRAGVGGYTYLLEPLWWIGM 60

Query: 61  IIMIVGEAANFIAYAFAPAVLVTPLGALSIIVRYFVSAMLA 102
           IIMIVGEAANFIAYAFAPAVLVTPLGALSII    VSA+LA
Sbjct: 61  IIMIVGEAANFIAYAFAPAVLVTPLGALSII----VSAVLA 97

[Close]

BLAST of Carg25426 vs. NCBI nr
Match: XP_023004403.1 (probable magnesium transporter NIPA6 isoform X1 [Cucurbita maxima])

HSP 1 Score: 174.1 bits (440), Expect = 2.9e-40
Identity = 96/101 (95.05%), Postives = 97/101 (96.04%), Query Frame = 0


Query: 1   MGFGEDNLNGVILALLSSGFIGASFIIKKKGLRRAAAASGVRAGVGGYTYLLEPLWWIGM 60
           MGFGEDNLNGVILALLSSGFIGASFIIKKKGLRRAAAASGVRAGVGGYTYLLEPLWWIGM
Sbjct: 1   MGFGEDNLNGVILALLSSGFIGASFIIKKKGLRRAAAASGVRAGVGGYTYLLEPLWWIGM 60

Query: 61  IIMIVGEAANFIAYAFAPAVLVTPLGALSIIVRYFVSAMLA 102
           IIMIVGEAANFIAYAFAPAVLVTPLGALSII    VSA+LA
Sbjct: 61  IIMIVGEAANFIAYAFAPAVLVTPLGALSII----VSAVLA 97

[Close]

BLAST of Carg25426 vs. NCBI nr
Match: XP_008450363.1 (PREDICTED: probable magnesium transporter NIPA6 isoform X1 [Cucumis melo])

HSP 1 Score: 169.5 bits (428), Expect = 7.2e-39
Identity = 94/101 (93.07%), Postives = 95/101 (94.06%), Query Frame = 0


Query: 1   MGFGEDNLNGVILALLSSGFIGASFIIKKKGLRRAAAASGVRAGVGGYTYLLEPLWWIGM 60
           MGF EDNL GVILALLSSGFIGASFIIKKKGLRRAAAASGVRAGVGGYTYLLEPLWWIGM
Sbjct: 1   MGFSEDNLTGVILALLSSGFIGASFIIKKKGLRRAAAASGVRAGVGGYTYLLEPLWWIGM 60

Query: 61  IIMIVGEAANFIAYAFAPAVLVTPLGALSIIVRYFVSAMLA 102
           IIMIVGEAANFIAYAFAPAVLVTPLGALSII    VSA+LA
Sbjct: 61  IIMIVGEAANFIAYAFAPAVLVTPLGALSII----VSAVLA 97

[Close]

BLAST of Carg25426 vs. NCBI nr
Match: XP_008450364.1 (PREDICTED: probable magnesium transporter NIPA6 isoform X2 [Cucumis melo])

HSP 1 Score: 169.5 bits (428), Expect = 7.2e-39
Identity = 94/101 (93.07%), Postives = 95/101 (94.06%), Query Frame = 0


Query: 1   MGFGEDNLNGVILALLSSGFIGASFIIKKKGLRRAAAASGVRAGVGGYTYLLEPLWWIGM 60
           MGF EDNL GVILALLSSGFIGASFIIKKKGLRRAAAASGVRAGVGGYTYLLEPLWWIGM
Sbjct: 1   MGFSEDNLTGVILALLSSGFIGASFIIKKKGLRRAAAASGVRAGVGGYTYLLEPLWWIGM 60

Query: 61  IIMIVGEAANFIAYAFAPAVLVTPLGALSIIVRYFVSAMLA 102
           IIMIVGEAANFIAYAFAPAVLVTPLGALSII    VSA+LA
Sbjct: 61  IIMIVGEAANFIAYAFAPAVLVTPLGALSII----VSAVLA 97

[Close]

BLAST of Carg25426 vs. NCBI nr
Match: XP_008450366.1 (PREDICTED: probable magnesium transporter NIPA3 isoform X3 [Cucumis melo])

HSP 1 Score: 169.5 bits (428), Expect = 7.2e-39
Identity = 94/101 (93.07%), Postives = 95/101 (94.06%), Query Frame = 0


Query: 1   MGFGEDNLNGVILALLSSGFIGASFIIKKKGLRRAAAASGVRAGVGGYTYLLEPLWWIGM 60
           MGF EDNL GVILALLSSGFIGASFIIKKKGLRRAAAASGVRAGVGGYTYLLEPLWWIGM
Sbjct: 1   MGFSEDNLTGVILALLSSGFIGASFIIKKKGLRRAAAASGVRAGVGGYTYLLEPLWWIGM 60

Query: 61  IIMIVGEAANFIAYAFAPAVLVTPLGALSIIVRYFVSAMLA 102
           IIMIVGEAANFIAYAFAPAVLVTPLGALSII    VSA+LA
Sbjct: 61  IIMIVGEAANFIAYAFAPAVLVTPLGALSII----VSAVLA 97

[Close]

BLAST of Carg25426 vs. TAIR10
Match: AT1G34470.1 (Protein of unknown function (DUF803))

HSP 1 Score: 134.0 bits (336), Expect = 6.1e-32
Identity = 69/91 (75.82%), Postives = 79/91 (86.81%), Query Frame = 0


Query: 2   GFGEDNLNGVILALLSSGFIGASFIIKKKGLRRAAAASGVRAGVGGYTYLLEPLWWIGMI 61
           G   DN+ G++LAL SS FIGASFI+KKKGL+R A ASG+RAG GGY+YLLEPLWW+GMI
Sbjct: 14  GMSSDNIKGLVLALSSSLFIGASFIVKKKGLKR-AGASGLRAGSGGYSYLLEPLWWVGMI 73

Query: 62  IMIVGEAANFIAYAFAPAVLVTPLGALSIIV 93
            MIVGE ANF AYAFAPA+LVTPLGALSII+
Sbjct: 74  TMIVGEIANFAAYAFAPAILVTPLGALSIII 103

[Close]

BLAST of Carg25426 vs. TAIR10
Match: AT4G09640.1 (Protein of unknown function (DUF803))

HSP 1 Score: 132.9 bits (333), Expect = 1.4e-31
Identity = 69/91 (75.82%), Postives = 79/91 (86.81%), Query Frame = 0


Query: 2   GFGEDNLNGVILALLSSGFIGASFIIKKKGLRRAAAASGVRAGVGGYTYLLEPLWWIGMI 61
           G   DN+ G++LAL SS FIGASFI+KKKGL++ A ASG+RAG GGY+YLLEPLWWIGMI
Sbjct: 14  GMSSDNVKGLVLALSSSIFIGASFIVKKKGLKK-AGASGLRAGSGGYSYLLEPLWWIGMI 73

Query: 62  IMIVGEAANFIAYAFAPAVLVTPLGALSIIV 93
            MIVGE ANF AYAFAPA+LVTPLGALSII+
Sbjct: 74  TMIVGEIANFAAYAFAPAILVTPLGALSIII 103

[Close]

BLAST of Carg25426 vs. TAIR10
Match: AT1G71900.1 (Protein of unknown function (DUF803))

HSP 1 Score: 127.5 bits (319), Expect = 5.7e-30
Identity = 68/100 (68.00%), Postives = 83/100 (83.00%), Query Frame = 0


Query: 2   GFGEDNLNGVILALLSSGFIGASFIIKKKGLRRAAAASGVRAGVGGYTYLLEPLWWIGMI 61
           G   DN+ G++LAL SS FIGASFI+KKKGL++ AA++G RAGVGGY+YL EPLWWIGM 
Sbjct: 14  GMSSDNIKGLVLALSSSLFIGASFIVKKKGLKK-AASTGTRAGVGGYSYLYEPLWWIGMT 73

Query: 62  IMIVGEAANFIAYAFAPAVLVTPLGALSIIVRYFVSAMLA 102
            M++GE ANF AYAFAPA+LVTPLGA+SII    +SA+LA
Sbjct: 74  TMLLGEIANFAAYAFAPAILVTPLGAVSII----ISAVLA 108

[Close]

BLAST of Carg25426 vs. TAIR10
Match: AT2G21120.1 (Protein of unknown function (DUF803))

HSP 1 Score: 125.9 bits (315), Expect = 1.7e-29
Identity = 70/96 (72.92%), Postives = 80/96 (83.33%), Query Frame = 0


Query: 6   DNLNGVILALLSSGFIGASFIIKKKGLRRAAAASGVRAGVGGYTYLLEPLWWIGMIIMIV 65
           DN  G+ILA+ SS FIG+SFI+KKKGL+RA A  G RAG GGYTYLLEPLWW GM+ MIV
Sbjct: 4   DNGKGLILAVASSVFIGSSFILKKKGLKRAGAI-GTRAGYGGYTYLLEPLWWAGMVTMIV 63

Query: 66  GEAANFIAYAFAPAVLVTPLGALSIIVRYFVSAMLA 102
           GEAANF+AY +APAVLVTPLGALSII    +SA+LA
Sbjct: 64  GEAANFVAYIYAPAVLVTPLGALSII----ISAVLA 94

[Close]

BLAST of Carg25426 vs. TAIR10
Match: AT3G23870.1 (Protein of unknown function (DUF803))

HSP 1 Score: 125.2 bits (313), Expect = 2.8e-29
Identity = 72/96 (75.00%), Postives = 79/96 (82.29%), Query Frame = 0


Query: 6   DNLNGVILALLSSGFIGASFIIKKKGLRRAAAASGVRAGVGGYTYLLEPLWWIGMIIMIV 65
           DN+NGVILA+ SS FIG+SFIIKKKGL++ A ASGVRAG GGY YL EP WW GMI MIV
Sbjct: 7   DNINGVILAVSSSIFIGSSFIIKKKGLKK-AGASGVRAGEGGYGYLKEPWWWAGMITMIV 66

Query: 66  GEAANFIAYAFAPAVLVTPLGALSIIVRYFVSAMLA 102
           GE ANF AYAFAPA+LVTPLGALSII     SA+LA
Sbjct: 67  GEVANFAAYAFAPAILVTPLGALSII----FSAVLA 97

[Close]

BLAST of Carg25426 vs. Swiss-Prot
Match: sp|Q9LNK7|NIPA3_ARATH (Probable magnesium transporter NIPA3 OS=Arabidopsis thaliana OX=3702 GN=At1g34470 PE=2 SV=1)

HSP 1 Score: 134.0 bits (336), Expect = 1.1e-30
Identity = 69/91 (75.82%), Postives = 79/91 (86.81%), Query Frame = 0


Query: 2   GFGEDNLNGVILALLSSGFIGASFIIKKKGLRRAAAASGVRAGVGGYTYLLEPLWWIGMI 61
           G   DN+ G++LAL SS FIGASFI+KKKGL+R A ASG+RAG GGY+YLLEPLWW+GMI
Sbjct: 14  GMSSDNIKGLVLALSSSLFIGASFIVKKKGLKR-AGASGLRAGSGGYSYLLEPLWWVGMI 73

Query: 62  IMIVGEAANFIAYAFAPAVLVTPLGALSIIV 93
            MIVGE ANF AYAFAPA+LVTPLGALSII+
Sbjct: 74  TMIVGEIANFAAYAFAPAILVTPLGALSIII 103

[Close]

BLAST of Carg25426 vs. Swiss-Prot
Match: sp|F4JKQ7|NIPA5_ARATH (Probable magnesium transporter NIPA5 OS=Arabidopsis thaliana OX=3702 GN=At4g09640 PE=2 SV=1)

HSP 1 Score: 132.9 bits (333), Expect = 2.4e-30
Identity = 69/91 (75.82%), Postives = 79/91 (86.81%), Query Frame = 0


Query: 2   GFGEDNLNGVILALLSSGFIGASFIIKKKGLRRAAAASGVRAGVGGYTYLLEPLWWIGMI 61
           G   DN+ G++LAL SS FIGASFI+KKKGL++ A ASG+RAG GGY+YLLEPLWWIGMI
Sbjct: 14  GMSSDNVKGLVLALSSSIFIGASFIVKKKGLKK-AGASGLRAGSGGYSYLLEPLWWIGMI 73

Query: 62  IMIVGEAANFIAYAFAPAVLVTPLGALSIIV 93
            MIVGE ANF AYAFAPA+LVTPLGALSII+
Sbjct: 74  TMIVGEIANFAAYAFAPAILVTPLGALSIII 103

[Close]

BLAST of Carg25426 vs. Swiss-Prot
Match: sp|Q94AH3|NIPA4_ARATH (Probable magnesium transporter NIPA4 OS=Arabidopsis thaliana OX=3702 GN=At1g71900 PE=2 SV=1)

HSP 1 Score: 127.5 bits (319), Expect = 1.0e-28
Identity = 68/100 (68.00%), Postives = 83/100 (83.00%), Query Frame = 0


Query: 2   GFGEDNLNGVILALLSSGFIGASFIIKKKGLRRAAAASGVRAGVGGYTYLLEPLWWIGMI 61
           G   DN+ G++LAL SS FIGASFI+KKKGL++ AA++G RAGVGGY+YL EPLWWIGM 
Sbjct: 14  GMSSDNIKGLVLALSSSLFIGASFIVKKKGLKK-AASTGTRAGVGGYSYLYEPLWWIGMT 73

Query: 62  IMIVGEAANFIAYAFAPAVLVTPLGALSIIVRYFVSAMLA 102
            M++GE ANF AYAFAPA+LVTPLGA+SII    +SA+LA
Sbjct: 74  TMLLGEIANFAAYAFAPAILVTPLGAVSII----ISAVLA 108

[Close]

BLAST of Carg25426 vs. Swiss-Prot
Match: sp|Q8GWX2|NIPA6_ARATH (Probable magnesium transporter NIPA6 OS=Arabidopsis thaliana OX=3702 GN=At2g21120 PE=2 SV=1)

HSP 1 Score: 125.9 bits (315), Expect = 3.0e-28
Identity = 70/96 (72.92%), Postives = 80/96 (83.33%), Query Frame = 0


Query: 6   DNLNGVILALLSSGFIGASFIIKKKGLRRAAAASGVRAGVGGYTYLLEPLWWIGMIIMIV 65
           DN  G+ILA+ SS FIG+SFI+KKKGL+RA A  G RAG GGYTYLLEPLWW GM+ MIV
Sbjct: 4   DNGKGLILAVASSVFIGSSFILKKKGLKRAGAI-GTRAGYGGYTYLLEPLWWAGMVTMIV 63

Query: 66  GEAANFIAYAFAPAVLVTPLGALSIIVRYFVSAMLA 102
           GEAANF+AY +APAVLVTPLGALSII    +SA+LA
Sbjct: 64  GEAANFVAYIYAPAVLVTPLGALSII----ISAVLA 94

[Close]

BLAST of Carg25426 vs. Swiss-Prot
Match: sp|Q9LIR9|NIPA1_ARATH (Probable magnesium transporter NIPA1 OS=Arabidopsis thaliana OX=3702 GN=At3g23870 PE=2 SV=1)

HSP 1 Score: 125.2 bits (313), Expect = 5.1e-28
Identity = 72/96 (75.00%), Postives = 79/96 (82.29%), Query Frame = 0


Query: 6   DNLNGVILALLSSGFIGASFIIKKKGLRRAAAASGVRAGVGGYTYLLEPLWWIGMIIMIV 65
           DN+NGVILA+ SS FIG+SFIIKKKGL++ A ASGVRAG GGY YL EP WW GMI MIV
Sbjct: 7   DNINGVILAVSSSIFIGSSFIIKKKGLKK-AGASGVRAGEGGYGYLKEPWWWAGMITMIV 66

Query: 66  GEAANFIAYAFAPAVLVTPLGALSIIVRYFVSAMLA 102
           GE ANF AYAFAPA+LVTPLGALSII     SA+LA
Sbjct: 67  GEVANFAAYAFAPAILVTPLGALSII----FSAVLA 97

[Close]

BLAST of Carg25426 vs. TrEMBL
Match: tr|A0A1S3BP41|A0A1S3BP41_CUCME (Probable magnesium transporter OS=Cucumis melo OX=3656 GN=LOC103491991 PE=3 SV=1)

HSP 1 Score: 169.5 bits (428), Expect = 4.8e-39
Identity = 94/101 (93.07%), Postives = 95/101 (94.06%), Query Frame = 0


Query: 1   MGFGEDNLNGVILALLSSGFIGASFIIKKKGLRRAAAASGVRAGVGGYTYLLEPLWWIGM 60
           MGF EDNL GVILALLSSGFIGASFIIKKKGLRRAAAASGVRAGVGGYTYLLEPLWWIGM
Sbjct: 1   MGFSEDNLTGVILALLSSGFIGASFIIKKKGLRRAAAASGVRAGVGGYTYLLEPLWWIGM 60

Query: 61  IIMIVGEAANFIAYAFAPAVLVTPLGALSIIVRYFVSAMLA 102
           IIMIVGEAANFIAYAFAPAVLVTPLGALSII    VSA+LA
Sbjct: 61  IIMIVGEAANFIAYAFAPAVLVTPLGALSII----VSAVLA 97

[Close]

BLAST of Carg25426 vs. TrEMBL
Match: tr|A0A1S3BP20|A0A1S3BP20_CUCME (Probable magnesium transporter OS=Cucumis melo OX=3656 GN=LOC103491991 PE=3 SV=1)

HSP 1 Score: 169.5 bits (428), Expect = 4.8e-39
Identity = 94/101 (93.07%), Postives = 95/101 (94.06%), Query Frame = 0


Query: 1   MGFGEDNLNGVILALLSSGFIGASFIIKKKGLRRAAAASGVRAGVGGYTYLLEPLWWIGM 60
           MGF EDNL GVILALLSSGFIGASFIIKKKGLRRAAAASGVRAGVGGYTYLLEPLWWIGM
Sbjct: 1   MGFSEDNLTGVILALLSSGFIGASFIIKKKGLRRAAAASGVRAGVGGYTYLLEPLWWIGM 60

Query: 61  IIMIVGEAANFIAYAFAPAVLVTPLGALSIIVRYFVSAMLA 102
           IIMIVGEAANFIAYAFAPAVLVTPLGALSII    VSA+LA
Sbjct: 61  IIMIVGEAANFIAYAFAPAVLVTPLGALSII----VSAVLA 97

[Close]

BLAST of Carg25426 vs. TrEMBL
Match: tr|A0A1S3BPR0|A0A1S3BPR0_CUCME (Probable magnesium transporter OS=Cucumis melo OX=3656 GN=LOC103491991 PE=3 SV=1)

HSP 1 Score: 169.5 bits (428), Expect = 4.8e-39
Identity = 94/101 (93.07%), Postives = 95/101 (94.06%), Query Frame = 0


Query: 1   MGFGEDNLNGVILALLSSGFIGASFIIKKKGLRRAAAASGVRAGVGGYTYLLEPLWWIGM 60
           MGF EDNL GVILALLSSGFIGASFIIKKKGLRRAAAASGVRAGVGGYTYLLEPLWWIGM
Sbjct: 1   MGFSEDNLTGVILALLSSGFIGASFIIKKKGLRRAAAASGVRAGVGGYTYLLEPLWWIGM 60

Query: 61  IIMIVGEAANFIAYAFAPAVLVTPLGALSIIVRYFVSAMLA 102
           IIMIVGEAANFIAYAFAPAVLVTPLGALSII    VSA+LA
Sbjct: 61  IIMIVGEAANFIAYAFAPAVLVTPLGALSII----VSAVLA 97

[Close]

BLAST of Carg25426 vs. TrEMBL
Match: tr|A0A0A0LXH2|A0A0A0LXH2_CUCSA (Probable magnesium transporter OS=Cucumis sativus OX=3659 GN=Csa_1G627400 PE=3 SV=1)

HSP 1 Score: 167.5 bits (423), Expect = 1.8e-38
Identity = 92/101 (91.09%), Postives = 94/101 (93.07%), Query Frame = 0


Query: 1   MGFGEDNLNGVILALLSSGFIGASFIIKKKGLRRAAAASGVRAGVGGYTYLLEPLWWIGM 60
           MGF EDNL GVILALLSSGFIGASFIIKKKGLRRAAAASGVRAGVGGYTYLLEPLWWIGM
Sbjct: 1   MGFSEDNLTGVILALLSSGFIGASFIIKKKGLRRAAAASGVRAGVGGYTYLLEPLWWIGM 60

Query: 61  IIMIVGEAANFIAYAFAPAVLVTPLGALSIIVRYFVSAMLA 102
            IMIVGEAANF+AYAFAPAVLVTPLGALSII    VSA+LA
Sbjct: 61  FIMIVGEAANFVAYAFAPAVLVTPLGALSII----VSAVLA 97

[Close]

BLAST of Carg25426 vs. TrEMBL
Match: tr|A0A1D1YGE1|A0A1D1YGE1_9ARAE (Probable magnesium transporter OS=Anthurium amnicola OX=1678845 GN=NIPA2_12 PE=3 SV=1)

HSP 1 Score: 163.3 bits (412), Expect = 3.4e-37
Identity = 87/101 (86.14%), Postives = 93/101 (92.08%), Query Frame = 0


Query: 1   MGFGEDNLNGVILALLSSGFIGASFIIKKKGLRRAAAASGVRAGVGGYTYLLEPLWWIGM 60
           MGF  DNLNGV+LALLSSGFIGASFIIKKKGLRRAAAASG+RAGVGGYTYLLEPLWW+GM
Sbjct: 1   MGFSGDNLNGVLLALLSSGFIGASFIIKKKGLRRAAAASGIRAGVGGYTYLLEPLWWVGM 60

Query: 61  IIMIVGEAANFIAYAFAPAVLVTPLGALSIIVRYFVSAMLA 102
           I MIVGE ANF+AYAFAPAVL+TPLGALSII    VSA+LA
Sbjct: 61  ITMIVGEVANFVAYAFAPAVLITPLGALSII----VSAVLA 97

The following BLAST results are available for this feature:

BLAST of Carg25426 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022928581.1	2.9e-40	95.05	probable magnesium transporter NIPA6 isoform X1 [Cucurbita moschata] >XP_0235308...	[more]
XP_023004403.1	2.9e-40	95.05	probable magnesium transporter NIPA6 isoform X1 [Cucurbita maxima]	[more]
XP_008450363.1	7.2e-39	93.07	PREDICTED: probable magnesium transporter NIPA6 isoform X1 [Cucumis melo]	[more]
XP_008450364.1	7.2e-39	93.07	PREDICTED: probable magnesium transporter NIPA6 isoform X2 [Cucumis melo]	[more]
XP_008450366.1	7.2e-39	93.07	PREDICTED: probable magnesium transporter NIPA3 isoform X3 [Cucumis melo]	[more]

BLAST of Carg25426 vs. TAIR10


Match Name	E-value	Identity	Description
AT1G34470.1	6.1e-32	75.82	Protein of unknown function (DUF803)	[more]
AT4G09640.1	1.4e-31	75.82	Protein of unknown function (DUF803)	[more]
AT1G71900.1	5.7e-30	68.00	Protein of unknown function (DUF803)	[more]
AT2G21120.1	1.7e-29	72.92	Protein of unknown function (DUF803)	[more]
AT3G23870.1	2.8e-29	75.00	Protein of unknown function (DUF803)	[more]

BLAST of Carg25426 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|Q9LNK7\|NIPA3_ARATH	1.1e-30	75.82	Probable magnesium transporter NIPA3 OS=Arabidopsis thaliana OX=3702 GN=At1g3447...	[more]
sp\|F4JKQ7\|NIPA5_ARATH	2.4e-30	75.82	Probable magnesium transporter NIPA5 OS=Arabidopsis thaliana OX=3702 GN=At4g0964...	[more]
sp\|Q94AH3\|NIPA4_ARATH	1.0e-28	68.00	Probable magnesium transporter NIPA4 OS=Arabidopsis thaliana OX=3702 GN=At1g7190...	[more]
sp\|Q8GWX2\|NIPA6_ARATH	3.0e-28	72.92	Probable magnesium transporter NIPA6 OS=Arabidopsis thaliana OX=3702 GN=At2g2112...	[more]
sp\|Q9LIR9\|NIPA1_ARATH	5.1e-28	75.00	Probable magnesium transporter NIPA1 OS=Arabidopsis thaliana OX=3702 GN=At3g2387...	[more]

BLAST of Carg25426 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A1S3BP41\|A0A1S3BP41_CUCME	4.8e-39	93.07	Probable magnesium transporter OS=Cucumis melo OX=3656 GN=LOC103491991 PE=3 SV=1	[more]
tr\|A0A1S3BP20\|A0A1S3BP20_CUCME	4.8e-39	93.07	Probable magnesium transporter OS=Cucumis melo OX=3656 GN=LOC103491991 PE=3 SV=1	[more]
tr\|A0A1S3BPR0\|A0A1S3BPR0_CUCME	4.8e-39	93.07	Probable magnesium transporter OS=Cucumis melo OX=3656 GN=LOC103491991 PE=3 SV=1	[more]
tr\|A0A0A0LXH2\|A0A0A0LXH2_CUCSA	1.8e-38	91.09	Probable magnesium transporter OS=Cucumis sativus OX=3659 GN=Csa_1G627400 PE=3 S...	[more]
tr\|A0A1D1YGE1\|A0A1D1YGE1_9ARAE	3.4e-37	86.14	Probable magnesium transporter OS=Anthurium amnicola OX=1678845 GN=NIPA2_12 PE=3...	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Molecular Function**
Term	Definition
GO:0015095	magnesium ion transmembrane transporter activity

Vocabulary: **Cellular Component**
Term	Definition
GO:0016021	integral component of membrane

Vocabulary: **Biological Process**
Term	Definition
GO:0015693	magnesium ion transport

Vocabulary: **INTERPRO**
Term	Definition
IPR008521	Mg_trans_NIPA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0015693	magnesium ion transport
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0015095	magnesium ion transmembrane transporter activity

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg25426-RA	Carg25426-RA	mRNA

InterPro

Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR008521	Magnesium transporter NIPA	PFAM	PF05653	Mg_trans_NIPA	coord: 6..104 e-value: 1.6E-39 score: 135.7
IPR008521	Magnesium transporter NIPA	PANTHER	PTHR12570	UNCHARACTERIZED	coord: 2..100
None	No IPR available	PANTHER	PTHR12570:SF19	SUBFAMILY NOT NAMED	coord: 2..100

Synteny

The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Carg25426	Cucumber (Gy14) v2	carcgybB0433
Carg25426	Cucurbita maxima (Rimu)	carcmaB0589
Carg25426	Cucurbita maxima (Rimu)	carcmaB0590
Carg25426	Cucurbita moschata (Rifu)	carcmoB0574
Carg25426	Cucurbita moschata (Rifu)	carcmoB0575
Carg25426	Cucurbita pepo (Zucchini)	carcpeB0595
Carg25426	Cucurbita pepo (Zucchini)	carcpeB0596
Carg25426	Wild cucumber (PI 183967)	carcpiB0462
Carg25426	Cucumber (Chinese Long) v2	carcuB0457
Carg25426	Cucumber (Chinese Long) v3	carcucB0458
Carg25426	Bottle gourd (USVL1VR-Ls)	carlsiB385
Carg25426	Melon (DHL92) v3.5.1	carmeB0432
Carg25426	Melon (DHL92) v3.6.1	carmedB0434
Carg25426	Watermelon (Charleston Gray)	carwcgB0417
Carg25426	Watermelon (97103) v2	carwmbB0448
Carg25426	Wax gourd	carwgoB0510