Carg25425 (gene) Silver-seed gourd
The following sequences are available for this feature:
Legend: polypeptideCDSexonthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.ATGGGATTTTCTAGTGCTGTGTTGGCCCATTTTATCTTGAAGGAGAGGTTGCACAAGCTTGGAATTTTGGGGTGTGTGATGTGTATAGCAGGCTCAGTCATTATAGTTGTTCATGCTCCAAGTGAGCGTCCTATTACTTCTGTACAGGAAATATGGAATATGGCAACACAGCCAGGTTAAACGTCTAGCTCGTGACTCGTTTCGTTTTGTTCGTTACCTTGTCGTACGTGAGCTTCATTGCTGATTAATACTATTTTGTTTTTCAGCCTTCTTGCTATATATGGGCTCTGTGATTGTATTGGTTTTTATTCTTGCCATCTATTTTTCCCCGCGATGTGGCCATACCAACGTGTTGGTGTTTACCGGAATTTGTTCGCTCATGGGTTCCCTCTCGGTACGTCTCGTCTCACCAGAGCGTCGAGTTTAGTTGAATTATGATGCATTTCATTGTTCCAAACTACCGCGTTTAAACGTTTGATAGCATGGCATGAATTGCAACTAATCTTGCAAACAACTTATTGCATCTTATGTGCAAAATGCATAGCTCAATGGTCGTTTTTTTAGTAGGAAGGAGTAGATGCCTTAACCACGGAGCTATGCTTACGTTGGCGTCGAAAATCAATGGTCTAATTTAAATTGTCTTATTACAACTAGTTACTATTTGTTTTAGAAGCTTCGCTACACATGATTTTCCAAAACTATGTTGAAAGGATAAAAGGTTTGCATTCTCATTTGTTAATTGATTTTGTGTATGATTGACTTCCATCCTGAATATTTGCAGGTGATGAGTGTTAAAGCCCTTGGGACATCATTGAAATTGACCTTTGAGGGGAAGAACCAATTAATATACCCTGAGACGTGGTTTTTCATGTTGGTGGTTGTAACTTGCGTCATTATTCAAATGAATTATCTCAACAAGGTTGTCAATTCTACTACTCTTTTATTGTTCTTAGACTGGCATGTGGTTGCTTAACTTTGAAAGTCATGTTTGAGTTTTCTATCTCACAAAATGAAGAAAGATATTGGGTTTTCCTTTCGGACTTCCCTTTAAGGTTTTTAAAACGTGTCGACTAGAGAGAGGTTTCCACACCCTTGTAAAGAATGATGTAGGATCTCACAATCCACCCCCCTTCGGGGCCCAATGTCCTCACTGACACTAGCTCCCTTCTCCAATTGATGTGGGACTCCCCAATCCAACCCCCTTTGGGGCCCAACATTCTTGCTGGCACACTGCCTCGTGTCCACCCCCCTTCGGGGCTTAGTCTCCTCGTTGGCACATTGCCTAGTGTCTGACTCTAATACCATTTGTGACAGTCTAAGCCCACTGCTAGCAGATATTGTTCTCTTTGGACTTTCTCTTATGAGCTTCCCCTTGAAGGTTTAAAGCGCGTCTGTTAGGGAGAGGTTTCCACACCTTTATAAGGAATGCTTCGTTTCACTCTCTAACCGATGTGGGATCTCACAATCCACCCCCCTTGGGGACCCAACGTCTTCGCTAGCACATTGCCTGATGTCTAGCTTTGATACCATTTGTAACAGCCCAAGCCCACCACTAGCATATATTGTCCGTTTTGGGCTTTCTCTTCTAGGCTTCCCCTCAAGGTTTTAAAACACGTCTATTAGGGAGAGGTTTCCACACTCTTATAAATAATACTTCGTTTCGCTCTCCAACCGATGTGGGATCTCACATTATAGGTCTCCTACGTAGGAGTATCACGTGGTAAAATTGTAGATGGTAGATATGAATTCCATCTCTACAGACTTCATAACCAGCAAAAATAGAGCGTATGCATAAGAAAGCAACTGAAAGAAATCAGTTAGCAATGAATAAAGAAAGGTAGACAAGGGAACCATTTGATGAATGCCTCTGGAAGTCATAATCTACTCATGAACTCTTGTTAATAACAACAGCAAAGCTAGTGGAGGAGACCTATGGCCACTTCCAAACCCTTCAGTTCACGCTGAAATGTTAATATTTTCCAACCCCAGATGTTGTATGCTTAGAGGGTAGTTTTATGGGATCAGAAGCGAGTAGAAACTAACAAAAAAAGCTCATTCTTTGCACATAAAATTCTATATGTTCTCATCTGAAGCTCATCAAGAACGGGCAGTTTGCAATTATGGTTGATATCAATATATTAGTTTCTTTTCTTATTTGTTTTACACATTGTTCATGTGTGAATTCTGTCCTCCTTGCTTTTGTTCTCCTTGCTTTTGTTCTCCTTGCATTACTCTACTCTAGCCGTTGATATAATGCTCCTCCAACTTTTTGTTGCTTCATTGAGTTAATTACTCTAAGTTGGTTTACAATCGATCGACGAAACATCAATAAACGCCTCTTATTTGTGTTTTTCAGGCACTCGACACATTCAACACTGCAATCGTCTCACCGATATACTACGTTATGTTTACAACACTGACAATCCTTGCAAGTGTCATAATGTTCAAGGTATGAAAAATCTAGTTGTGTGTGTAAGATGGTGTAAGAACAGCTGAAGCATGCGTCGAGATTGTCACTACAGTTATTTAAATTTTATGCGATATCAAACGAAACGAAACGATTTCTAAAGATCTTAGATTCTTCTGAACTTGGATTCATGATGTTATCTGAGCTGATTGATGAGGAAGTCTGCTAGGAGTTAGGACAATATCTTCGCTTCATTTCATTCGCTCTTATCTCGAGTCGTTCATACATAAGCTTAATATATTAGTACTTAGAAAAATACATCTTTTACTTCAGGATTGGGATGGCCAAAGTGGAGGAACAATCATATCTGAAATATGTGGCTTTGTTGTTGTGCTGTCTGGTACCATCTTGCTGCAACTAACCAAAGATTTTGAAAGAAGCTCATCCTTTAGAGGTGTGTGAAGAACTTAATGTTGCATCATAAAATGATATTTAAATCTGTTGATGCAAAATCTTGGTGTTACAAATACATATGCAGGCAATCATTCCCCGGGTTCCCCTTCGTTATCGACACGACTTTGCAGTGGAAATGGTGAACTAGTGAAGTATAGTGATCATGAAGACGTGCCTTCGGACGAAATATGCTTGAGAATACAAGAATCATACTAGTTGTTCTTCCATCTGATACACATATCTTCTTAAAGCAACATTATGGAGTGCCTGTAAATGATCAAAAACCAGTCAGCTGGCTGTCGAGGCCCGAACGGGCGTCGAAGTTTCGTTGCTTAGTTTGAAACGTCGTAGAGATATCCATAGGAAGCTTGTTCCACATGACAAGGGGGGTCTCACAGAAGACACATTTGTGTTTCAGACACAGGAAGCTTGAGTTTCCAAAAGGTGGAAGGACCAACATAGAAATTGTTCCTTGTGTAGCTTCATATTATGTGCTTTGCTGCTGATTTCTGTCTTCTCTGCTTCATATGGGATATACATTTGGCACAGAAATTCAATTCTTCTGTACATAAGAAATTCTTTTAAGTGCATAAATTAAGGGATCCAAACTTCCATTGGGAAGTATTGTTCAAAAGAACTCTGATGGGTTCAATCAATGTTTATCCTGTCAAACCTTGGCATGCGTTAGCTCTTCATCTTCGCTATCAACGTAGTTTAGGCGTTATATCATAACATCATTTCAATTTAACTGTTATGGTTGAACGAGCTCTGCTCTTGCAATTAGGTCCACATTTTTGTATCCATACAAGAACAAAGATGCCTTCGAGTCCATAAGACCCTTCTCGTCTTTAACGGTAGGAAT ATGGGATTTTCTAGTGCTGTGTTGGCCCATTTTATCTTGAAGGAGAGGTTGCACAAGCTTGGAATTTTGGGGTGTGTGATGTGTATAGCAGGCTCAGTCATTATAGTTGTTCATGCTCCAAGTGAGCGTCCTATTACTTCTGTACAGGAAATATGGAATATGGCAACACAGCCAGCCTTCTTGCTATATATGGGCTCTGTGATTGTATTGGTTTTTATTCTTGCCATCTATTTTTCCCCGCGATGTGGCCATACCAACGTGTTGGTGTTTACCGGAATTTGTTCGCTCATGGGTTCCCTCTCGGCACTCGACACATTCAACACTGCAATCGTCTCACCGATATACTACGTTATGTTTACAACACTGACAATCCTTGCAAGTGTCATAATGTTCAAGGATTGGGATGGCCAAAGTGGAGGAACAATCATATCTGAAATATGTGGCTTTGTTGTTGTGCTGTCTGGTACCATCTTGCTGCAACTAACCAAAGATTTTGAAAGAAGCTCATCCTTTAGAGGCAATCATTCCCCGGGTTCCCCTTCGTTATCGACACGACTTTGCAGTGGAAATGGTGAACTAGTGAAGTATAGTGATCATGAAGACGTGCCTTCGGACGAAATATGCTTGAGAATACAAGAATCATACTAGTTGTTCTTCCATCTGATACACATATCTTCTTAAAGCAACATTATGGAGTGCCTGTAAATGATCAAAAACCAGTCAGCTGGCTGTCGAGGCCCGAACGGGCGTCGAAGTTTCGTTGCTTAGTTTGAAACGTCGTAGAGATATCCATAGGAAGCTTGTTCCACATGACAAGGGGGGTCTCACAGAAGACACATTTGTGTTTCAGACACAGGAAGCTTGAGTTTCCAAAAGGTGGAAGGACCAACATAGAAATTGTTCCTTGTGTAGCTTCATATTATGTGCTTTGCTGCTGATTTCTGTCTTCTCTGCTTCATATGGGATATACATTTGGCACAGAAATTCAATTCTTCTGTACATAAGAAATTCTTTTAAGTGCATAAATTAAGGGATCCAAACTTCCATTGGGAAGTATTGTTCAAAAGAACTCTGATGGGTTCAATCAATGTTTATCCTGTCAAACCTTGGCATGCGTTAGCTCTTCATCTTCGCTATCAACGTAGTTTAGGCGTTATATCATAACATCATTTCAATTTAACTGTTATGGTTGAACGAGCTCTGCTCTTGCAATTAGGTCCACATTTTTGTATCCATACAAGAACAAAGATGCCTTCGAGTCCATAAGACCCTTCTCGTCTTTAACGGTAGGAAT ATGGGATTTTCTAGTGCTGTGTTGGCCCATTTTATCTTGAAGGAGAGGTTGCACAAGCTTGGAATTTTGGGGTGTGTGATGTGTATAGCAGGCTCAGTCATTATAGTTGTTCATGCTCCAAGTGAGCGTCCTATTACTTCTGTACAGGAAATATGGAATATGGCAACACAGCCAGCCTTCTTGCTATATATGGGCTCTGTGATTGTATTGGTTTTTATTCTTGCCATCTATTTTTCCCCGCGATGTGGCCATACCAACGTGTTGGTGTTTACCGGAATTTGTTCGCTCATGGGTTCCCTCTCGGCACTCGACACATTCAACACTGCAATCGTCTCACCGATATACTACGTTATGTTTACAACACTGACAATCCTTGCAAGTGTCATAATGTTCAAGGATTGGGATGGCCAAAGTGGAGGAACAATCATATCTGAAATATGTGGCTTTGTTGTTGTGCTGTCTGGTACCATCTTGCTGCAACTAACCAAAGATTTTGAAAGAAGCTCATCCTTTAGAGGCAATCATTCCCCGGGTTCCCCTTCGTTATCGACACGACTTTGCAGTGGAAATGGTGAACTAGTGAAGTATAGTGATCATGAAGACGTGCCTTCGGACGAAATATGCTTGAGAATACAAGAATCATACTAG MGFSSAVLAHFILKERLHKLGILGCVMCIAGSVIIVVHAPSERPITSVQEIWNMATQPAFLLYMGSVIVLVFILAIYFSPRCGHTNVLVFTGICSLMGSLSALDTFNTAIVSPIYYVMFTTLTILASVIMFKDWDGQSGGTIISEICGFVVVLSGTILLQLTKDFERSSSFRGNHSPGSPSLSTRLCSGNGELVKYSDHEDVPSDEICLRIQESY
BLAST of Carg25425 vs. NCBI nr
Match: XP_022928581.1 (probable magnesium transporter NIPA6 isoform X1 [Cucurbita moschata] >XP_023530894.1 probable magnesium transporter NIPA6 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 393.7 bits (1010), Expect = 4.1e-106 Identity = 211/257 (82.10%), Postives = 211/257 (82.10%), Query Frame = 0
BLAST of Carg25425 vs. NCBI nr
Match: XP_022928582.1 (probable magnesium transporter NIPA3 isoform X2 [Cucurbita moschata]) HSP 1 Score: 393.7 bits (1010), Expect = 4.1e-106 Identity = 211/257 (82.10%), Postives = 211/257 (82.10%), Query Frame = 0
BLAST of Carg25425 vs. NCBI nr
Match: XP_023004403.1 (probable magnesium transporter NIPA6 isoform X1 [Cucurbita maxima]) HSP 1 Score: 392.5 bits (1007), Expect = 9.2e-106 Identity = 210/257 (81.71%), Postives = 211/257 (82.10%), Query Frame = 0
BLAST of Carg25425 vs. NCBI nr
Match: XP_023004413.1 (probable magnesium transporter NIPA3 isoform X2 [Cucurbita maxima]) HSP 1 Score: 392.5 bits (1007), Expect = 9.2e-106 Identity = 210/257 (81.71%), Postives = 211/257 (82.10%), Query Frame = 0
BLAST of Carg25425 vs. NCBI nr
Match: XP_008450364.1 (PREDICTED: probable magnesium transporter NIPA6 isoform X2 [Cucumis melo]) HSP 1 Score: 375.2 bits (962), Expect = 1.5e-100 Identity = 190/211 (90.05%), Postives = 202/211 (95.73%), Query Frame = 0
BLAST of Carg25425 vs. TAIR10
Match: AT2G21120.1 (Protein of unknown function (DUF803)) HSP 1 Score: 199.9 bits (507), Expect = 1.6e-51 Identity = 103/212 (48.58%), Postives = 135/212 (63.68%), Query Frame = 0
BLAST of Carg25425 vs. TAIR10
Match: AT4G13800.1 (Protein of unknown function (DUF803)) HSP 1 Score: 199.9 bits (507), Expect = 1.6e-51 Identity = 108/221 (48.87%), Postives = 137/221 (61.99%), Query Frame = 0
BLAST of Carg25425 vs. TAIR10
Match: AT3G23870.1 (Protein of unknown function (DUF803)) HSP 1 Score: 199.5 bits (506), Expect = 2.1e-51 Identity = 108/233 (46.35%), Postives = 141/233 (60.52%), Query Frame = 0
BLAST of Carg25425 vs. TAIR10
Match: AT1G71900.1 (Protein of unknown function (DUF803)) HSP 1 Score: 197.2 bits (500), Expect = 1.0e-50 Identity = 111/212 (52.36%), Postives = 129/212 (60.85%), Query Frame = 0
BLAST of Carg25425 vs. TAIR10
Match: AT1G34470.1 (Protein of unknown function (DUF803)) HSP 1 Score: 196.4 bits (498), Expect = 1.8e-50 Identity = 106/216 (49.07%), Postives = 133/216 (61.57%), Query Frame = 0
BLAST of Carg25425 vs. Swiss-Prot
Match: sp|B3LFA3|NIPA2_ARATH (Probable magnesium transporter NIPA2 OS=Arabidopsis thaliana OX=3702 GN=At4g13800 PE=2 SV=1) HSP 1 Score: 199.9 bits (507), Expect = 2.9e-50 Identity = 108/221 (48.87%), Postives = 137/221 (61.99%), Query Frame = 0
BLAST of Carg25425 vs. Swiss-Prot
Match: sp|Q8GWX2|NIPA6_ARATH (Probable magnesium transporter NIPA6 OS=Arabidopsis thaliana OX=3702 GN=At2g21120 PE=2 SV=1) HSP 1 Score: 199.9 bits (507), Expect = 2.9e-50 Identity = 103/212 (48.58%), Postives = 135/212 (63.68%), Query Frame = 0
BLAST of Carg25425 vs. Swiss-Prot
Match: sp|Q9LIR9|NIPA1_ARATH (Probable magnesium transporter NIPA1 OS=Arabidopsis thaliana OX=3702 GN=At3g23870 PE=2 SV=1) HSP 1 Score: 199.5 bits (506), Expect = 3.7e-50 Identity = 108/233 (46.35%), Postives = 141/233 (60.52%), Query Frame = 0
BLAST of Carg25425 vs. Swiss-Prot
Match: sp|Q94AH3|NIPA4_ARATH (Probable magnesium transporter NIPA4 OS=Arabidopsis thaliana OX=3702 GN=At1g71900 PE=2 SV=1) HSP 1 Score: 197.2 bits (500), Expect = 1.9e-49 Identity = 111/212 (52.36%), Postives = 129/212 (60.85%), Query Frame = 0
BLAST of Carg25425 vs. Swiss-Prot
Match: sp|Q9LNK7|NIPA3_ARATH (Probable magnesium transporter NIPA3 OS=Arabidopsis thaliana OX=3702 GN=At1g34470 PE=2 SV=1) HSP 1 Score: 196.4 bits (498), Expect = 3.2e-49 Identity = 106/216 (49.07%), Postives = 133/216 (61.57%), Query Frame = 0
BLAST of Carg25425 vs. TrEMBL
Match: tr|A0A1S3BP20|A0A1S3BP20_CUCME (Probable magnesium transporter OS=Cucumis melo OX=3656 GN=LOC103491991 PE=3 SV=1) HSP 1 Score: 375.2 bits (962), Expect = 1.0e-100 Identity = 190/211 (90.05%), Postives = 202/211 (95.73%), Query Frame = 0
BLAST of Carg25425 vs. TrEMBL
Match: tr|A0A1S3BP41|A0A1S3BP41_CUCME (Probable magnesium transporter OS=Cucumis melo OX=3656 GN=LOC103491991 PE=3 SV=1) HSP 1 Score: 353.2 bits (905), Expect = 4.1e-94 Identity = 190/257 (73.93%), Postives = 202/257 (78.60%), Query Frame = 0
BLAST of Carg25425 vs. TrEMBL
Match: tr|A0A0A0LXH2|A0A0A0LXH2_CUCSA (Probable magnesium transporter OS=Cucumis sativus OX=3659 GN=Csa_1G627400 PE=3 SV=1) HSP 1 Score: 349.4 bits (895), Expect = 5.9e-93 Identity = 189/257 (73.54%), Postives = 199/257 (77.43%), Query Frame = 0
BLAST of Carg25425 vs. TrEMBL
Match: tr|A0A2I4F1G2|A0A2I4F1G2_9ROSI (Probable magnesium transporter OS=Juglans regia OX=51240 GN=LOC108994649 PE=3 SV=1) HSP 1 Score: 336.3 bits (861), Expect = 5.2e-89 Identity = 178/257 (69.26%), Postives = 192/257 (74.71%), Query Frame = 0
BLAST of Carg25425 vs. TrEMBL
Match: tr|A0A2I4F1G7|A0A2I4F1G7_9ROSI (Probable magnesium transporter OS=Juglans regia OX=51240 GN=LOC108994649 PE=3 SV=1) HSP 1 Score: 336.3 bits (861), Expect = 5.2e-89 Identity = 178/257 (69.26%), Postives = 192/257 (74.71%), Query Frame = 0
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene:
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