Carg25235 (gene) Silver-seed gourd | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Carg25235
Type	gene
Organism	Cucurbita argyrosperma (Silver-seed gourd)
Description	Heat shock protein, putative
Location	Cucurbita_argyrosperma_scaffold_189 : 313667 .. 314679 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCGGATGCTGAAACGTTCGCTTTTCAGGCCGAGATTAATCAGCTTCTCAGTCTGATTATCAACACCTTTTACAGCAATAAGGAGATCTTTCTCCGGGAACTTATTAGCAACTCCTCTGATGTACGTTTCCTTTTCTTTTCTTTCACTTTTTCTTTGATCTTCTTCGTATCTGCTGTTCTAGGAGTTAATCGTTTTCTTTTTGTTTTTCTTCTGTCGTATGTGCATTCTTCTCGATTGTGAAGTTTGATTTAACTCCATTTTCTTTTACATTTATTTGATCCAAACTTGGTAGGTTGTGTTCTGATTTGTGGCTTCTGACGATGTTTTTCTAGACATACTCTGTGAATTATAAGAGATCGTAATTTTATTTGGTTTACCGATCTAAATTTGGTCGATTGTTGGCTTTTGGGATTTTACTTGCATCATGATTTACAATTTGAACAAGTTTTCTTAGTATCAGGTGAATTGACATGTATAATCTTGTTCGGTAGTCGTGTGAATATACTTTTTCGTGGAATCATGAAACATTATGTACTTTCTTGGATTATGAAGATAGAAATTTCACTAGATCCAGTTTTGAAATTAATAATTTGAAACTTCATTTCAGGCTCTAGATAAAATCCGGTTCGAGAGCTTGACCGACAAGAGTAAGCTAGATGCCCAGCCTGAACTCTTTATCCACATCATTCCTGATAAGGCAAACAATACATTGTCGATTATTGACAGTGGTATTGGCATGACCAAGGCTGGTGAGTGGTTGCCACAGCTTATGTGTAATCGTCTTTTAGCCTATATGTGATACTCGTATCTCATTTCTCGAACATGTTGATGCAGATTTGGTGAACAATCTTGGAACCATTGCGCGATCTGGGACCAAGGAATTCATGGAAGCCATTGCAGCTGGTGCTGATGTGAGCATGATTGGGCAGTTTGGAGTGGGTTTCTACTCAGCATACCTTGTGGCTGAAAAGGTCATTGTTACCACAAAGCACAATGATGATGAGCAGTAC

mRNA sequence

ATGGCGGATGCTGAAACGTTCGCTTTTCAGGCCGAGATTAATCAGCTTCTCAGTCTGATTATCAACACCTTTTACAGCAATAAGGAGATCTTTCTCCGGGAACTTATTAGCAACTCCTCTGATGCTCTAGATAAAATCCGGTTCGAGAGCTTGACCGACAAGAGTAAGCTAGATGCCCAGCCTGAACTCTTTATCCACATCATTCCTGATAAGGCAAACAATACATTGTCGATTATTGACAGTGGTATTGGCATGACCAAGGCTGATTTGGTGAACAATCTTGGAACCATTGCGCGATCTGGGACCAAGGAATTCATGGAAGCCATTGCAGCTGGTGCTGATGTGAGCATGATTGGGCAGTTTGGAGTGGGTTTCTACTCAGCATACCTTGTGGCTGAAAAGGTCATTGTTACCACAAAGCACAATGATGATGAGCAGTAC

Coding sequence (CDS)

ATGGCGGATGCTGAAACGTTCGCTTTTCAGGCCGAGATTAATCAGCTTCTCAGTCTGATTATCAACACCTTTTACAGCAATAAGGAGATCTTTCTCCGGGAACTTATTAGCAACTCCTCTGATGCTCTAGATAAAATCCGGTTCGAGAGCTTGACCGACAAGAGTAAGCTAGATGCCCAGCCTGAACTCTTTATCCACATCATTCCTGATAAGGCAAACAATACATTGTCGATTATTGACAGTGGTATTGGCATGACCAAGGCTGATTTGGTGAACAATCTTGGAACCATTGCGCGATCTGGGACCAAGGAATTCATGGAAGCCATTGCAGCTGGTGCTGATGTGAGCATGATTGGGCAGTTTGGAGTGGGTTTCTACTCAGCATACCTTGTGGCTGAAAAGGTCATTGTTACCACAAAGCACAATGATGATGAGCAGTAC

Protein sequence

MADAETFAFQAEINQLLSLIINTFYSNKEIFLRELISNSSDALDKIRFESLTDKSKLDAQPELFIHIIPDKANNTLSIIDSGIGMTKADLVNNLGTIARSGTKEFMEAIAAGADVSMIGQFGVGFYSAYLVAEKVIVTTKHNDDEQY

Homology

[Close]

BLAST of Carg25235 vs. NCBI nr
Match: XP_022932348.1 (heat shock cognate protein 80-like [Cucurbita moschata])

HSP 1 Score: 281.2 bits (718), Expect = 2.0e-72
Identity = 147/147 (100.00%), Postives = 147/147 (100.00%), Query Frame = 0


Query: 1   MADAETFAFQAEINQLLSLIINTFYSNKEIFLRELISNSSDALDKIRFESLTDKSKLDAQ 60
           MADAETFAFQAEINQLLSLIINTFYSNKEIFLRELISNSSDALDKIRFESLTDKSKLDAQ
Sbjct: 1   MADAETFAFQAEINQLLSLIINTFYSNKEIFLRELISNSSDALDKIRFESLTDKSKLDAQ 60

Query: 61  PELFIHIIPDKANNTLSIIDSGIGMTKADLVNNLGTIARSGTKEFMEAIAAGADVSMIGQ 120
           PELFIHIIPDKANNTLSIIDSGIGMTKADLVNNLGTIARSGTKEFMEAIAAGADVSMIGQ
Sbjct: 61  PELFIHIIPDKANNTLSIIDSGIGMTKADLVNNLGTIARSGTKEFMEAIAAGADVSMIGQ 120

Query: 121 FGVGFYSAYLVAEKVIVTTKHNDDEQY 148
           FGVGFYSAYLVAEKVIVTTKHNDDEQY
Sbjct: 121 FGVGFYSAYLVAEKVIVTTKHNDDEQY 147

[Close]

BLAST of Carg25235 vs. NCBI nr
Match: XP_023007729.1 (heat shock cognate protein 80-like [Cucurbita maxima])

HSP 1 Score: 281.2 bits (718), Expect = 2.0e-72
Identity = 147/147 (100.00%), Postives = 147/147 (100.00%), Query Frame = 0


Query: 1   MADAETFAFQAEINQLLSLIINTFYSNKEIFLRELISNSSDALDKIRFESLTDKSKLDAQ 60
           MADAETFAFQAEINQLLSLIINTFYSNKEIFLRELISNSSDALDKIRFESLTDKSKLDAQ
Sbjct: 1   MADAETFAFQAEINQLLSLIINTFYSNKEIFLRELISNSSDALDKIRFESLTDKSKLDAQ 60

Query: 61  PELFIHIIPDKANNTLSIIDSGIGMTKADLVNNLGTIARSGTKEFMEAIAAGADVSMIGQ 120
           PELFIHIIPDKANNTLSIIDSGIGMTKADLVNNLGTIARSGTKEFMEAIAAGADVSMIGQ
Sbjct: 61  PELFIHIIPDKANNTLSIIDSGIGMTKADLVNNLGTIARSGTKEFMEAIAAGADVSMIGQ 120

Query: 121 FGVGFYSAYLVAEKVIVTTKHNDDEQY 148
           FGVGFYSAYLVAEKVIVTTKHNDDEQY
Sbjct: 121 FGVGFYSAYLVAEKVIVTTKHNDDEQY 147

[Close]

BLAST of Carg25235 vs. NCBI nr
Match: XP_023553324.1 (heat shock cognate protein 80-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 281.2 bits (718), Expect = 2.0e-72
Identity = 147/147 (100.00%), Postives = 147/147 (100.00%), Query Frame = 0


Query: 1   MADAETFAFQAEINQLLSLIINTFYSNKEIFLRELISNSSDALDKIRFESLTDKSKLDAQ 60
           MADAETFAFQAEINQLLSLIINTFYSNKEIFLRELISNSSDALDKIRFESLTDKSKLDAQ
Sbjct: 1   MADAETFAFQAEINQLLSLIINTFYSNKEIFLRELISNSSDALDKIRFESLTDKSKLDAQ 60

Query: 61  PELFIHIIPDKANNTLSIIDSGIGMTKADLVNNLGTIARSGTKEFMEAIAAGADVSMIGQ 120
           PELFIHIIPDKANNTLSIIDSGIGMTKADLVNNLGTIARSGTKEFMEAIAAGADVSMIGQ
Sbjct: 61  PELFIHIIPDKANNTLSIIDSGIGMTKADLVNNLGTIARSGTKEFMEAIAAGADVSMIGQ 120

Query: 121 FGVGFYSAYLVAEKVIVTTKHNDDEQY 148
           FGVGFYSAYLVAEKVIVTTKHNDDEQY
Sbjct: 121 FGVGFYSAYLVAEKVIVTTKHNDDEQY 147

[Close]

BLAST of Carg25235 vs. NCBI nr
Match: XP_010539340.1 (PREDICTED: heat shock protein 90-2-like [Tarenaya hassleriana])

HSP 1 Score: 278.9 bits (712), Expect = 1.0e-71
Identity = 145/147 (98.64%), Postives = 146/147 (99.32%), Query Frame = 0


Query: 1   MADAETFAFQAEINQLLSLIINTFYSNKEIFLRELISNSSDALDKIRFESLTDKSKLDAQ 60
           MAD ETFAFQAEINQLLSLIINTFYSNKEIFLRELISNSSDALDKIRFESLTDKSKLDAQ
Sbjct: 1   MADTETFAFQAEINQLLSLIINTFYSNKEIFLRELISNSSDALDKIRFESLTDKSKLDAQ 60

Query: 61  PELFIHIIPDKANNTLSIIDSGIGMTKADLVNNLGTIARSGTKEFMEAIAAGADVSMIGQ 120
           PELFIHIIPDKANNTLSIIDSGIGMTKADLVNNLGTIARSGTKEFMEA+AAGADVSMIGQ
Sbjct: 61  PELFIHIIPDKANNTLSIIDSGIGMTKADLVNNLGTIARSGTKEFMEALAAGADVSMIGQ 120

Query: 121 FGVGFYSAYLVAEKVIVTTKHNDDEQY 148
           FGVGFYSAYLVAEKVIVTTKHNDDEQY
Sbjct: 121 FGVGFYSAYLVAEKVIVTTKHNDDEQY 147

[Close]

BLAST of Carg25235 vs. NCBI nr
Match: XP_022931686.1 (heat shock cognate protein 80-like [Cucurbita moschata])

HSP 1 Score: 278.5 bits (711), Expect = 1.3e-71
Identity = 145/147 (98.64%), Postives = 146/147 (99.32%), Query Frame = 0


Query: 1   MADAETFAFQAEINQLLSLIINTFYSNKEIFLRELISNSSDALDKIRFESLTDKSKLDAQ 60
           MAD ETFAFQAEINQLLSLIINTFYSNKEIFLRELISNSSDALDKIRFESLTDKSKLDAQ
Sbjct: 1   MADTETFAFQAEINQLLSLIINTFYSNKEIFLRELISNSSDALDKIRFESLTDKSKLDAQ 60

Query: 61  PELFIHIIPDKANNTLSIIDSGIGMTKADLVNNLGTIARSGTKEFMEAIAAGADVSMIGQ 120
           PELFIHIIPDKANNTL+IIDSGIGMTKADLVNNLGTIARSGTKEFMEAIAAGADVSMIGQ
Sbjct: 61  PELFIHIIPDKANNTLTIIDSGIGMTKADLVNNLGTIARSGTKEFMEAIAAGADVSMIGQ 120

Query: 121 FGVGFYSAYLVAEKVIVTTKHNDDEQY 148
           FGVGFYSAYLVAEKVIVTTKHNDDEQY
Sbjct: 121 FGVGFYSAYLVAEKVIVTTKHNDDEQY 147

[Close]

BLAST of Carg25235 vs. TAIR10
Match: AT5G56000.1 (HEAT SHOCK PROTEIN 81.4)

HSP 1 Score: 274.6 bits (701), Expect = 3.5e-74
Identity = 141/147 (95.92%), Postives = 145/147 (98.64%), Query Frame = 0


Query: 1   MADAETFAFQAEINQLLSLIINTFYSNKEIFLRELISNSSDALDKIRFESLTDKSKLDAQ 60
           MADAETFAFQAEINQLLSLIINTFYSNKEIFLRELISNSSDALDKIRFESLTDKSKLD Q
Sbjct: 1   MADAETFAFQAEINQLLSLIINTFYSNKEIFLRELISNSSDALDKIRFESLTDKSKLDGQ 60

Query: 61  PELFIHIIPDKANNTLSIIDSGIGMTKADLVNNLGTIARSGTKEFMEAIAAGADVSMIGQ 120
           PELFIHIIPDK NNTL+IIDSGIGMTKADLVNNLGTIARSGTKEFMEA+AAGADVSMIGQ
Sbjct: 61  PELFIHIIPDKTNNTLTIIDSGIGMTKADLVNNLGTIARSGTKEFMEALAAGADVSMIGQ 120

Query: 121 FGVGFYSAYLVAEKVIVTTKHNDDEQY 148
           FGVGFYSAYLVA+KV+VTTKHNDDEQY
Sbjct: 121 FGVGFYSAYLVADKVVVTTKHNDDEQY 147

[Close]

BLAST of Carg25235 vs. TAIR10
Match: AT5G56010.1 (heat shock protein 81-3)

HSP 1 Score: 274.6 bits (701), Expect = 3.5e-74
Identity = 141/147 (95.92%), Postives = 145/147 (98.64%), Query Frame = 0


Query: 1   MADAETFAFQAEINQLLSLIINTFYSNKEIFLRELISNSSDALDKIRFESLTDKSKLDAQ 60
           MADAETFAFQAEINQLLSLIINTFYSNKEIFLRELISNSSDALDKIRFESLTDKSKLD Q
Sbjct: 1   MADAETFAFQAEINQLLSLIINTFYSNKEIFLRELISNSSDALDKIRFESLTDKSKLDGQ 60

Query: 61  PELFIHIIPDKANNTLSIIDSGIGMTKADLVNNLGTIARSGTKEFMEAIAAGADVSMIGQ 120
           PELFIHIIPDK NNTL+IIDSGIGMTKADLVNNLGTIARSGTKEFMEA+AAGADVSMIGQ
Sbjct: 61  PELFIHIIPDKTNNTLTIIDSGIGMTKADLVNNLGTIARSGTKEFMEALAAGADVSMIGQ 120

Query: 121 FGVGFYSAYLVAEKVIVTTKHNDDEQY 148
           FGVGFYSAYLVA+KV+VTTKHNDDEQY
Sbjct: 121 FGVGFYSAYLVADKVVVTTKHNDDEQY 147

[Close]

BLAST of Carg25235 vs. TAIR10
Match: AT5G52640.1 (heat shock protein 90.1)

HSP 1 Score: 268.9 bits (686), Expect = 1.9e-72
Identity = 138/147 (93.88%), Postives = 143/147 (97.28%), Query Frame = 0


Query: 1   MADAETFAFQAEINQLLSLIINTFYSNKEIFLRELISNSSDALDKIRFESLTDKSKLDAQ 60
           MADAETFAFQAEINQLLSLIINTFYSNKEIFLRELISNSSDALDKIRFESLTDKSKLD Q
Sbjct: 6   MADAETFAFQAEINQLLSLIINTFYSNKEIFLRELISNSSDALDKIRFESLTDKSKLDGQ 65

Query: 61  PELFIHIIPDKANNTLSIIDSGIGMTKADLVNNLGTIARSGTKEFMEAIAAGADVSMIGQ 120
           PELFI ++PDK+N TLSIIDSGIGMTKADLVNNLGTIARSGTKEFMEA+ AGADVSMIGQ
Sbjct: 66  PELFIRLVPDKSNKTLSIIDSGIGMTKADLVNNLGTIARSGTKEFMEALQAGADVSMIGQ 125

Query: 121 FGVGFYSAYLVAEKVIVTTKHNDDEQY 148
           FGVGFYSAYLVAEKV+VTTKHNDDEQY
Sbjct: 126 FGVGFYSAYLVAEKVVVTTKHNDDEQY 152

[Close]

BLAST of Carg25235 vs. TAIR10
Match: AT5G56030.2 (heat shock protein 81-2)

HSP 1 Score: 259.2 bits (661), Expect = 1.5e-69
Identity = 141/176 (80.11%), Postives = 145/176 (82.39%), Query Frame = 0


Query: 1   MADAETFAFQAEINQLLSLIINTFYSNKEIFLRELISNSSD------------------- 60
           MADAETFAFQAEINQLLSLIINTFYSNKEIFLRELISNSSD                   
Sbjct: 1   MADAETFAFQAEINQLLSLIINTFYSNKEIFLRELISNSSDVRSLSLSTLLYTCVSRLID 60

Query: 61  ----------ALDKIRFESLTDKSKLDAQPELFIHIIPDKANNTLSIIDSGIGMTKADLV 120
                     ALDKIRFESLTDKSKLD QPELFIHIIPDK NNTL+IIDSGIGMTKADLV
Sbjct: 61  LADGSVDLGLALDKIRFESLTDKSKLDGQPELFIHIIPDKTNNTLTIIDSGIGMTKADLV 120

Query: 121 NNLGTIARSGTKEFMEAIAAGADVSMIGQFGVGFYSAYLVAEKVIVTTKHNDDEQY 148
           NNLGTIARSGTKEFMEA+AAGADVSMIGQFGVGFYSAYLVA+KV+VTTKHNDDEQY
Sbjct: 121 NNLGTIARSGTKEFMEALAAGADVSMIGQFGVGFYSAYLVADKVVVTTKHNDDEQY 176

[Close]

BLAST of Carg25235 vs. TAIR10
Match: AT4G24190.1 (Chaperone protein htpG family protein)

HSP 1 Score: 171.8 bits (434), Expect = 3.2e-43
Identity = 91/148 (61.49%), Postives = 114/148 (77.03%), Query Frame = 0


Query: 2   ADAETFAFQAEINQLLSLIINTFYSNKEIFLRELISNSSDALDKIRFESLTDKSKLDA-- 61
           ++AE F FQAE+++L+ +IIN+ YSNK+IFLRELISN+SDALDKIRF +LTDK  L    
Sbjct: 74  SNAEKFEFQAEVSRLMDIIINSLYSNKDIFLRELISNASDALDKIRFLALTDKDVLGEGD 133

Query: 62  QPELFIHIIPDKANNTLSIIDSGIGMTKADLVNNLGTIARSGTKEFMEAIAAGADVSMIG 121
             +L I I  DKA   LSI D GIGMTK DL+ NLGTIA+SGT  F+E + +  D+++IG
Sbjct: 134 TAKLEIQIKLDKAKKILSIRDRGIGMTKEDLIKNLGTIAKSGTSAFVEKMQSSGDLNLIG 193

Query: 122 QFGVGFYSAYLVAEKVIVTTKHNDDEQY 148
           QFGVGFYSAYLVA+ + V +KHNDD QY
Sbjct: 194 QFGVGFYSAYLVADYIEVISKHNDDSQY 221

[Close]

BLAST of Carg25235 vs. Swiss-Prot
Match: sp|P55737|HS902_ARATH (Heat shock protein 90-2 OS=Arabidopsis thaliana OX=3702 GN=HSP90-2 PE=1 SV=1)

HSP 1 Score: 274.6 bits (701), Expect = 6.3e-73
Identity = 141/147 (95.92%), Postives = 145/147 (98.64%), Query Frame = 0


Query: 1   MADAETFAFQAEINQLLSLIINTFYSNKEIFLRELISNSSDALDKIRFESLTDKSKLDAQ 60
           MADAETFAFQAEINQLLSLIINTFYSNKEIFLRELISNSSDALDKIRFESLTDKSKLD Q
Sbjct: 1   MADAETFAFQAEINQLLSLIINTFYSNKEIFLRELISNSSDALDKIRFESLTDKSKLDGQ 60

Query: 61  PELFIHIIPDKANNTLSIIDSGIGMTKADLVNNLGTIARSGTKEFMEAIAAGADVSMIGQ 120
           PELFIHIIPDK NNTL+IIDSGIGMTKADLVNNLGTIARSGTKEFMEA+AAGADVSMIGQ
Sbjct: 61  PELFIHIIPDKTNNTLTIIDSGIGMTKADLVNNLGTIARSGTKEFMEALAAGADVSMIGQ 120

Query: 121 FGVGFYSAYLVAEKVIVTTKHNDDEQY 148
           FGVGFYSAYLVA+KV+VTTKHNDDEQY
Sbjct: 121 FGVGFYSAYLVADKVVVTTKHNDDEQY 147

[Close]

BLAST of Carg25235 vs. Swiss-Prot
Match: sp|P51818|HS903_ARATH (Heat shock protein 90-3 OS=Arabidopsis thaliana OX=3702 GN=HSP90-3 PE=1 SV=2)

HSP 1 Score: 274.6 bits (701), Expect = 6.3e-73
Identity = 141/147 (95.92%), Postives = 145/147 (98.64%), Query Frame = 0


Query: 1   MADAETFAFQAEINQLLSLIINTFYSNKEIFLRELISNSSDALDKIRFESLTDKSKLDAQ 60
           MADAETFAFQAEINQLLSLIINTFYSNKEIFLRELISNSSDALDKIRFESLTDKSKLD Q
Sbjct: 1   MADAETFAFQAEINQLLSLIINTFYSNKEIFLRELISNSSDALDKIRFESLTDKSKLDGQ 60

Query: 61  PELFIHIIPDKANNTLSIIDSGIGMTKADLVNNLGTIARSGTKEFMEAIAAGADVSMIGQ 120
           PELFIHIIPDK NNTL+IIDSGIGMTKADLVNNLGTIARSGTKEFMEA+AAGADVSMIGQ
Sbjct: 61  PELFIHIIPDKTNNTLTIIDSGIGMTKADLVNNLGTIARSGTKEFMEALAAGADVSMIGQ 120

Query: 121 FGVGFYSAYLVAEKVIVTTKHNDDEQY 148
           FGVGFYSAYLVA+KV+VTTKHNDDEQY
Sbjct: 121 FGVGFYSAYLVADKVVVTTKHNDDEQY 147

[Close]

BLAST of Carg25235 vs. Swiss-Prot
Match: sp|O03986|HS904_ARATH (Heat shock protein 90-4 OS=Arabidopsis thaliana OX=3702 GN=HSP90-4 PE=1 SV=1)

HSP 1 Score: 274.6 bits (701), Expect = 6.3e-73
Identity = 141/147 (95.92%), Postives = 145/147 (98.64%), Query Frame = 0


Query: 1   MADAETFAFQAEINQLLSLIINTFYSNKEIFLRELISNSSDALDKIRFESLTDKSKLDAQ 60
           MADAETFAFQAEINQLLSLIINTFYSNKEIFLRELISNSSDALDKIRFESLTDKSKLD Q
Sbjct: 1   MADAETFAFQAEINQLLSLIINTFYSNKEIFLRELISNSSDALDKIRFESLTDKSKLDGQ 60

Query: 61  PELFIHIIPDKANNTLSIIDSGIGMTKADLVNNLGTIARSGTKEFMEAIAAGADVSMIGQ 120
           PELFIHIIPDK NNTL+IIDSGIGMTKADLVNNLGTIARSGTKEFMEA+AAGADVSMIGQ
Sbjct: 61  PELFIHIIPDKTNNTLTIIDSGIGMTKADLVNNLGTIARSGTKEFMEALAAGADVSMIGQ 120

Query: 121 FGVGFYSAYLVAEKVIVTTKHNDDEQY 148
           FGVGFYSAYLVA+KV+VTTKHNDDEQY
Sbjct: 121 FGVGFYSAYLVADKVVVTTKHNDDEQY 147

[Close]

BLAST of Carg25235 vs. Swiss-Prot
Match: sp|P36181|HSP80_SOLLC (Heat shock cognate protein 80 OS=Solanum lycopersicum OX=4081 GN=HSC80 PE=2 SV=1)

HSP 1 Score: 274.6 bits (701), Expect = 6.3e-73
Identity = 141/147 (95.92%), Postives = 145/147 (98.64%), Query Frame = 0


Query: 1   MADAETFAFQAEINQLLSLIINTFYSNKEIFLRELISNSSDALDKIRFESLTDKSKLDAQ 60
           M+D ETFAFQAEINQLLSLIINTFYSNKEIFLRELISNSSDALDKIRFESLTDKSKLD Q
Sbjct: 1   MSDVETFAFQAEINQLLSLIINTFYSNKEIFLRELISNSSDALDKIRFESLTDKSKLDGQ 60

Query: 61  PELFIHIIPDKANNTLSIIDSGIGMTKADLVNNLGTIARSGTKEFMEAIAAGADVSMIGQ 120
           PELFIHIIPDKANNTL+IIDSGIGMTKADLVNNLGTIARSGTKEFMEA+AAGADVSMIGQ
Sbjct: 61  PELFIHIIPDKANNTLTIIDSGIGMTKADLVNNLGTIARSGTKEFMEALAAGADVSMIGQ 120

Query: 121 FGVGFYSAYLVAEKVIVTTKHNDDEQY 148
           FGVGFYSAYLVAEKV+VTTKHNDDEQY
Sbjct: 121 FGVGFYSAYLVAEKVVVTTKHNDDEQY 147

[Close]

BLAST of Carg25235 vs. Swiss-Prot
Match: sp|A2YWQ1|HSP81_ORYSI (Heat shock protein 81-1 OS=Oryza sativa subsp. indica OX=39946 GN=HSP81-1 PE=2 SV=1)

HSP 1 Score: 269.6 bits (688), Expect = 2.0e-71
Identity = 137/146 (93.84%), Postives = 145/146 (99.32%), Query Frame = 0


Query: 2   ADAETFAFQAEINQLLSLIINTFYSNKEIFLRELISNSSDALDKIRFESLTDKSKLDAQP 61
           ++ ETFAFQAEINQLLSLIINTFYSNKEIFLRELISNSSDALDKIRFESLTDKSKLDAQP
Sbjct: 3   SETETFAFQAEINQLLSLIINTFYSNKEIFLRELISNSSDALDKIRFESLTDKSKLDAQP 62

Query: 62  ELFIHIIPDKANNTLSIIDSGIGMTKADLVNNLGTIARSGTKEFMEAIAAGADVSMIGQF 121
           ELFIHI+PDKA+NTLSIIDSGIGMTK+DLVNNLGTIARSGTKEFMEA+AAGADVSMIGQF
Sbjct: 63  ELFIHIVPDKASNTLSIIDSGIGMTKSDLVNNLGTIARSGTKEFMEALAAGADVSMIGQF 122

Query: 122 GVGFYSAYLVAEKVIVTTKHNDDEQY 148
           GVGFYSAYLVAE+V+VTTKHNDDEQY
Sbjct: 123 GVGFYSAYLVAERVVVTTKHNDDEQY 148

[Close]

BLAST of Carg25235 vs. TrEMBL
Match: tr|A0A078HG99|A0A078HG99_BRANA (BnaA03g11100D protein OS=Brassica napus OX=3708 GN=BnaA03g11100D PE=4 SV=1)

HSP 1 Score: 276.6 bits (706), Expect = 3.3e-71
Identity = 143/147 (97.28%), Postives = 146/147 (99.32%), Query Frame = 0


Query: 1   MADAETFAFQAEINQLLSLIINTFYSNKEIFLRELISNSSDALDKIRFESLTDKSKLDAQ 60
           MADAETFAFQAEINQLLSLIINTFYSNKEIFLRELISNSSDALDKIRFESLTDKSKLD Q
Sbjct: 1   MADAETFAFQAEINQLLSLIINTFYSNKEIFLRELISNSSDALDKIRFESLTDKSKLDGQ 60

Query: 61  PELFIHIIPDKANNTLSIIDSGIGMTKADLVNNLGTIARSGTKEFMEAIAAGADVSMIGQ 120
           PELFIHIIPDKANNTL+IIDSGIGMTKADLVNNLGTIARSGTKEFMEA+AAGADVSMIGQ
Sbjct: 61  PELFIHIIPDKANNTLTIIDSGIGMTKADLVNNLGTIARSGTKEFMEALAAGADVSMIGQ 120

Query: 121 FGVGFYSAYLVAEKVIVTTKHNDDEQY 148
           FGVGFYSAYLVA+KVIVTTKHNDDEQY
Sbjct: 121 FGVGFYSAYLVADKVIVTTKHNDDEQY 147

[Close]

BLAST of Carg25235 vs. TrEMBL
Match: tr|A0A0A0LZ00|A0A0A0LZ00_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G569290 PE=3 SV=1)

HSP 1 Score: 276.6 bits (706), Expect = 3.3e-71
Identity = 144/147 (97.96%), Postives = 145/147 (98.64%), Query Frame = 0


Query: 1   MADAETFAFQAEINQLLSLIINTFYSNKEIFLRELISNSSDALDKIRFESLTDKSKLDAQ 60
           MAD ETFAFQAEINQLLSLIINTFYSNKEIFLRELISNSSDALDKIRFESLTDKSKLDAQ
Sbjct: 1   MADTETFAFQAEINQLLSLIINTFYSNKEIFLRELISNSSDALDKIRFESLTDKSKLDAQ 60

Query: 61  PELFIHIIPDKANNTLSIIDSGIGMTKADLVNNLGTIARSGTKEFMEAIAAGADVSMIGQ 120
           PELFIHIIPDKAN TLSIIDSGIGMTKADLVNNLGTIARSGTKEFMEA+AAGADVSMIGQ
Sbjct: 61  PELFIHIIPDKANGTLSIIDSGIGMTKADLVNNLGTIARSGTKEFMEALAAGADVSMIGQ 120

Query: 121 FGVGFYSAYLVAEKVIVTTKHNDDEQY 148
           FGVGFYSAYLVAEKVIVTTKHNDDEQY
Sbjct: 121 FGVGFYSAYLVAEKVIVTTKHNDDEQY 147

[Close]

BLAST of Carg25235 vs. TrEMBL
Match: tr|A0A0A0LVZ8|A0A0A0LVZ8_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G569270 PE=3 SV=1)

HSP 1 Score: 276.6 bits (706), Expect = 3.3e-71
Identity = 144/147 (97.96%), Postives = 145/147 (98.64%), Query Frame = 0


Query: 1   MADAETFAFQAEINQLLSLIINTFYSNKEIFLRELISNSSDALDKIRFESLTDKSKLDAQ 60
           MAD ETFAFQAEINQLLSLIINTFYSNKEIFLRELISNSSDALDKIRFESLTDKSKLDAQ
Sbjct: 1   MADTETFAFQAEINQLLSLIINTFYSNKEIFLRELISNSSDALDKIRFESLTDKSKLDAQ 60

Query: 61  PELFIHIIPDKANNTLSIIDSGIGMTKADLVNNLGTIARSGTKEFMEAIAAGADVSMIGQ 120
           PELFIHIIPDKAN TLSIIDSGIGMTKADLVNNLGTIARSGTKEFMEA+AAGADVSMIGQ
Sbjct: 61  PELFIHIIPDKANGTLSIIDSGIGMTKADLVNNLGTIARSGTKEFMEALAAGADVSMIGQ 120

Query: 121 FGVGFYSAYLVAEKVIVTTKHNDDEQY 148
           FGVGFYSAYLVAEKVIVTTKHNDDEQY
Sbjct: 121 FGVGFYSAYLVAEKVIVTTKHNDDEQY 147

[Close]

BLAST of Carg25235 vs. TrEMBL
Match: tr|A0A078HG60|A0A078HG60_BRANA (BnaA03g10790D protein OS=Brassica napus OX=3708 GN=BnaA03g10790D PE=4 SV=1)

HSP 1 Score: 276.6 bits (706), Expect = 3.3e-71
Identity = 143/147 (97.28%), Postives = 146/147 (99.32%), Query Frame = 0


Query: 1   MADAETFAFQAEINQLLSLIINTFYSNKEIFLRELISNSSDALDKIRFESLTDKSKLDAQ 60
           MADAETFAFQAEINQLLSLIINTFYSNKEIFLRELISNSSDALDKIRFESLTDKSKLD Q
Sbjct: 1   MADAETFAFQAEINQLLSLIINTFYSNKEIFLRELISNSSDALDKIRFESLTDKSKLDGQ 60

Query: 61  PELFIHIIPDKANNTLSIIDSGIGMTKADLVNNLGTIARSGTKEFMEAIAAGADVSMIGQ 120
           PELFIHIIPDKANNTL+IIDSGIGMTKADLVNNLGTIARSGTKEFMEA+AAGADVSMIGQ
Sbjct: 61  PELFIHIIPDKANNTLTIIDSGIGMTKADLVNNLGTIARSGTKEFMEALAAGADVSMIGQ 120

Query: 121 FGVGFYSAYLVAEKVIVTTKHNDDEQY 148
           FGVGFYSAYLVA+KVIVTTKHNDDEQY
Sbjct: 121 FGVGFYSAYLVADKVIVTTKHNDDEQY 147

[Close]

BLAST of Carg25235 vs. TrEMBL
Match: tr|A0A1S3XGK4|A0A1S3XGK4_TOBAC (heat shock cognate protein 80-like OS=Nicotiana tabacum OX=4097 GN=LOC107764955 PE=3 SV=1)

HSP 1 Score: 276.2 bits (705), Expect = 4.3e-71
Identity = 143/147 (97.28%), Postives = 145/147 (98.64%), Query Frame = 0


Query: 1   MADAETFAFQAEINQLLSLIINTFYSNKEIFLRELISNSSDALDKIRFESLTDKSKLDAQ 60
           MAD ETFAFQAEINQLLSLIINTFYSNKEIFLRELISNSSDALDKIRFESLTDKSKLDAQ
Sbjct: 1   MADTETFAFQAEINQLLSLIINTFYSNKEIFLRELISNSSDALDKIRFESLTDKSKLDAQ 60

Query: 61  PELFIHIIPDKANNTLSIIDSGIGMTKADLVNNLGTIARSGTKEFMEAIAAGADVSMIGQ 120
           PELFIHIIPDK NNTL+IIDSGIGMTKADLVNNLGTIARSGTKEFMEA+AAGADVSMIGQ
Sbjct: 61  PELFIHIIPDKTNNTLTIIDSGIGMTKADLVNNLGTIARSGTKEFMEALAAGADVSMIGQ 120

Query: 121 FGVGFYSAYLVAEKVIVTTKHNDDEQY 148
           FGVGFYSAYLVAEKVIVTTKHNDDEQY
Sbjct: 121 FGVGFYSAYLVAEKVIVTTKHNDDEQY 147

The following BLAST results are available for this feature:

BLAST of Carg25235 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022932348.1	2.0e-72	100.00	heat shock cognate protein 80-like [Cucurbita moschata]	[more]
XP_023007729.1	2.0e-72	100.00	heat shock cognate protein 80-like [Cucurbita maxima]	[more]
XP_023553324.1	2.0e-72	100.00	heat shock cognate protein 80-like [Cucurbita pepo subsp. pepo]	[more]
XP_010539340.1	1.0e-71	98.64	PREDICTED: heat shock protein 90-2-like [Tarenaya hassleriana]	[more]
XP_022931686.1	1.3e-71	98.64	heat shock cognate protein 80-like [Cucurbita moschata]	[more]

BLAST of Carg25235 vs. TAIR10


Match Name	E-value	Identity	Description
AT5G56000.1	3.5e-74	95.92	HEAT SHOCK PROTEIN 81.4	[more]
AT5G56010.1	3.5e-74	95.92	heat shock protein 81-3	[more]
AT5G52640.1	1.9e-72	93.88	heat shock protein 90.1	[more]
AT5G56030.2	1.5e-69	80.11	heat shock protein 81-2	[more]
AT4G24190.1	3.2e-43	61.49	Chaperone protein htpG family protein	[more]

BLAST of Carg25235 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|P55737\|HS902_ARATH	6.3e-73	95.92	Heat shock protein 90-2 OS=Arabidopsis thaliana OX=3702 GN=HSP90-2 PE=1 SV=1	[more]
sp\|P51818\|HS903_ARATH	6.3e-73	95.92	Heat shock protein 90-3 OS=Arabidopsis thaliana OX=3702 GN=HSP90-3 PE=1 SV=2	[more]
sp\|O03986\|HS904_ARATH	6.3e-73	95.92	Heat shock protein 90-4 OS=Arabidopsis thaliana OX=3702 GN=HSP90-4 PE=1 SV=1	[more]
sp\|P36181\|HSP80_SOLLC	6.3e-73	95.92	Heat shock cognate protein 80 OS=Solanum lycopersicum OX=4081 GN=HSC80 PE=2 SV=1	[more]
sp\|A2YWQ1\|HSP81_ORYSI	2.0e-71	93.84	Heat shock protein 81-1 OS=Oryza sativa subsp. indica OX=39946 GN=HSP81-1 PE=2 S...	[more]

BLAST of Carg25235 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A078HG99\|A0A078HG99_BRANA	3.3e-71	97.28	BnaA03g11100D protein OS=Brassica napus OX=3708 GN=BnaA03g11100D PE=4 SV=1	[more]
tr\|A0A0A0LZ00\|A0A0A0LZ00_CUCSA	3.3e-71	97.96	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G569290 PE=3 SV=1	[more]
tr\|A0A0A0LVZ8\|A0A0A0LVZ8_CUCSA	3.3e-71	97.96	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G569270 PE=3 SV=1	[more]
tr\|A0A078HG60\|A0A078HG60_BRANA	3.3e-71	97.28	BnaA03g10790D protein OS=Brassica napus OX=3708 GN=BnaA03g10790D PE=4 SV=1	[more]
tr\|A0A1S3XGK4\|A0A1S3XGK4_TOBAC	4.3e-71	97.28	heat shock cognate protein 80-like OS=Nicotiana tabacum OX=4097 GN=LOC107764955 ...	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Molecular Function**
Term	Definition
GO:0005524	ATP binding
GO:0051082	unfolded protein binding

Vocabulary: **Biological Process**
Term	Definition
GO:0006950	response to stress
GO:0006457	protein folding

Vocabulary: **INTERPRO**
Term	Definition
IPR019805	Heat_shock_protein_90_CS
IPR001404	Hsp90_fam
IPR036890	HATPase_C_sf
IPR003594	HATPase_C
IPR020575	Hsp90_N

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006457	protein folding
biological_process	GO:0006950	response to stress
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0005524	ATP binding
molecular_function	GO:0051082	unfolded protein binding

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg25235-RA	Carg25235-RA	mRNA

InterPro

Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR020575	Heat shock protein Hsp90, N-terminal	PRINTS	PR00775	HEATSHOCK90	coord: 5..25 score: 77.0 coord: 75..92 score: 71.71 coord: 93..110 score: 74.7 coord: 118..140 score: 82.27 coord: 26..48 score: 89.5
IPR003594	Histidine kinase/HSP90-like ATPase	PFAM	PF02518	HATPase_c	coord: 27..141 e-value: 9.4E-13 score: 48.6
IPR003594	Histidine kinase/HSP90-like ATPase	CDD	cd00075	HATPase_c	coord: 29..142 e-value: 1.0427E-8 score: 48.0266
IPR036890	Histidine kinase/HSP90-like ATPase superfamily	GENE3D	G3DSA:3.30.565.10		coord: 5..147 e-value: 8.6E-71 score: 240.1
IPR036890	Histidine kinase/HSP90-like ATPase superfamily	SUPERFAMILY	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase	coord: 5..147
None	No IPR available	PANTHER	PTHR11528:SF74	SUBFAMILY NOT NAMED	coord: 2..147
IPR001404	Heat shock protein Hsp90 family	PANTHER	PTHR11528	HEAT SHOCK PROTEIN 90	coord: 2..147
IPR019805	Heat shock protein Hsp90, conserved site	PROSITE	PS00298	HSP90	coord: 25..34

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Carg25235	Cp4.1LG14g08160	Cucurbita pepo (Zucchini)	carcpeB0028
Carg25235	Cp4.1LG08g08150	Cucurbita pepo (Zucchini)	carcpeB0029

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Carg25235	Cucumber (Gy14) v1	carcgyB0014
Carg25235	Cucurbita maxima (Rimu)	carcmaB0024
Carg25235	Cucurbita moschata (Rifu)	carcmoB0025
Carg25235	Wild cucumber (PI 183967)	carcpiB0014
Carg25235	Cucumber (Chinese Long) v2	carcuB0014
Carg25235	Cucumber (Chinese Long) v3	carcucB0014
Carg25235	Bottle gourd (USVL1VR-Ls)	carlsiB013
Carg25235	Melon (DHL92) v3.5.1	carmeB0015
Carg25235	Melon (DHL92) v3.6.1	carmedB0016
Carg25235	Watermelon (Charleston Gray)	carwcgB0016
Carg25235	Watermelon (Charleston Gray)	carwcgB0017
Carg25235	Watermelon (97103) v1	carwmB0016
Carg25235	Watermelon (97103) v2	carwmbB0013
Carg25235	Wax gourd	carwgoB0016