Carg25196 (gene) Silver-seed gourd
The following sequences are available for this feature:
Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.ACTTATTTATTATAAAGAGTTGCAGCGCCAGTTCTTGAGGAGATCCGCTACCAGTTTCCCTTCTGAGCTCTGCAAAACGGAGCATTTGACTGAGTTCAGCGGTAGGAGGATCGCCGTACTCCGGCGGATAAGACGGTGGTTTCTTGCAGTCAAGATAATCGGAAGCATCGATAGAAGAGTTGGGGAATCGAGAGGATCGAGCGGCGGAGATCACAAAAATGTTGGTGGAGCCTCCTCCTTTCCAGGAAGCAGCGCGCTGTGAAGTCTGCAAATGCAGTTTCAACACCTTCCGACGACGGGTACCAAATTCTGTTTGCTCTATGATCGACTTTGTTGCATTAGTTTAGATTGAGCTAATGCAACGATGATCAATTTCGATTCTGTTTCGTGCTTTCGAGCTTTCGATCGCGAGATTAGATGATTTTCTGTGTTTTTATCTTTGTTTACAGCATCATTGCCGATGCTGTGGAAGGACGTTGTGCCACGAGCATTCTTCTTTTCAAATGGTATTATTGATTCCTCTTCCTCGTTGATGCCGTAATGGAGAATTTTTTGCGTTCTGACTGGTGTATGTATGTACTTGTTTGTGCGAAATTCAGGCCTTGCCGAAGTTCGATATTCATTCCTCTGTTAGAGTTTGTGCTGACTGTTTCAATAACTCCTCTCAGTAAGTCATGTTAAAATTTAATCATACACCCTGCCGTAGTTTATTTTACTTCAAAAATTATTCCAAAGCTGGTATTGGAATTGAACTTCAAGGGAAGTATTTTGAGACGACCTTTGGTCCTACTAGAAAGGATTTTATCGAGCTGAAGTTTTACTTCTCAATTGATAACTCATTTCGTTCTGAAGCTCAGAATTAAAGTGCGTGAGTTGAAACTGAAATAGAAAGTTGGCGTGAGATGTTTTCTTCAATGTAATCTTGACTATTTTCTTGCAACTTCTTGAACTCGAACTTTCTTGTTGGAAGTTTCATGTTCTAGCATTTAAACGACTAGAAACTTAAAAATCCAAACTGGGATCAGATGTTCTTGTATCAAGGATTTAGGTTGTACGAGAATGTGAGATCTCATAGCGGTTGGAGAGGGGAACGAAACATTTCTTATAAGGATGTAGAAATCTCTTCCTAACAGACGTTTTAAAACGGTGAGGCTGACGGCAATGCATAATGGGCCAAAGCAGACAATATCTTCTAGCGGTGAGGTTGGGCTGTTACAAATGGTATCAGAGCCAGACACCGGGTGGTGTGCCAGTAAGGACCCTGGGCCTCCAAGTGGGTGAATTGTGAGATCCCACATCGGTTGGAGAGGAGAACAAAACATTCCTTATAAGGTGTGGGAAACCTCTCCCCAACAGACACGTTTTTAAACCGTGAGGCTGACGACAATACGTAACAGGTCAAAGCAGACAACATTTGTTAGCGGTGAACTTGAATTGTTACAGAGAGAATCCAAAACTTTTGAATTTTTGGAACCTGTATATATTCAAGAAAAGTTAGAACTTGTGGTCCTTGTCTCTCGAAGCCGGGGCCTAAACGCATGTTGTTCTTGAAGTCTGTAACTCTTTTATATTCTATTTCTTGTTTCTTTAGCTTTCTTGTGAAGACACCATTAAAATTCTCATACCCACTTTCATCGATAATGAAACTTCCAGCTCCTAATCATTTTTCTCTACGAATCAGTGCGATCGAAATAAACATTCTAAAACATTCTTTGAACACTCTTTAAAGGCTCAAAGAATTTCAAAACCACCAATAATGAGGTAGTTGGATGTTATTGAGTGAGTGATATGAAGGCTTTTTGCCTGTTGGATGAAGCATAAAAGCTCTTAGATCAGCCATCAGCTCCTTCCTCTTGGAATTAGGCATTGAAAAAAAATTATATACAGACTTGGAAAGTCCTTGCTTTCTCTCGTTTGCTCCTAAATTCCTGCTCTCGTCTTAGACGCATCCTTAGAGTTTCCAAATTTTATGCTGAGATTGAACTTATTGTTTACTGTTTAGCACCTGTCATATTTTTGAAAAACTAGCGTCTTATTTATCGAGTTTGCCCTATTACAGATCTAGAGAAGTTGATCGACCACCGTCGTTAGCTGTAGTCGATCAAGTTGCAGATACAGTTTCTCAATTAAACCTTGATGGGAATGTAAATTCTGAGCCTAAGTCAGCTGTGGAGCATCAACCTGCGTTGAGCATTTCAGATTGCAATTGTGGAATGCCATTGTGCATTTGTGTCGCTCCAGTCCAGTCTATGAAAACAGAATCTGTTCCTTTGCAGGTTTTAATGTTTAGTAATTTCTTATGCTCCTTGTGCATCAACCGTGTCCCTTATGGAACTTGATTGTGCTTTTGGCAGAAGAAAACAGCTTCCACCTCTACTCAGAACAATTCAAAAGCAAAGAAGACTGATTCCAATCTAAGGAATAGAGGATCTACCTCCAACAGCAAGCTTCGGTATGTTATCTGGAGTTGTTTTATTCCAATAGGTTAGATTCTGTCTTCCCTTTCTGGCCCAGTATATGGGAAAAGTAAGTTTATCACACTCCTTCAAATAGTAAGTTTATCACACTCCAAATATAATTAATAAAATGATCAAATAACGTTAGTATAAAATTAAAGCTATGAATACTGTATTATAGCGTTAAAAAAATGCTACAATAAGTTAAAAGATAAAAGATAGAATAATATTTTAGATATATTCTACCTATTATAGCTTTAATAAAACACTATGAAATATTTTTATGAGAACTTATATAAGCTATAGTTTTATATTATATTATAGCATCTATTATGGCTTTAAAAAAACGCTATAAACAATCATCTATTATAGCTTTAAAAAAATGCTATAAAAAGTCTACAATAGCGTTTTTCGTATGCTATCGTATCCATTATTTCTTATAATGATGACTTGGGTCAAGTGACACATTTTCTCATTGCTTACATTCTTGCGTAGGTATTAGGTATCAAATTACCCTCCTTTATCATTGTTGGTATTATTGATTTGGTATATAAGTCCGATCTTAATATGCAGTTGTAATTTATATTATTGAATAGGAATCCTGTATTGAATAGGAATCCTGCAGATGAATCAAGGATCAATTATGAAGCAAGTGGCGAGGTATATATTGTGTATGATAATTTTTTTTGGTGTCTATCAAAGGCTTTTAAATTCTGCTTCATCTCATGAATTTCATGTTCTTGCAGGGGTTGAGGGAAGCAATCAAGAACGGTGACACTCATGCTGTCAAGAAACTTTTGAGTGAGGTACTAAATGCCTTTATGAAAATCAAAATATGTAATGGAATTATTTACTGTTCTCATGTTGGCAGGGTGTAGATGCAAATTACCATGACAAGCAAGGATTGTCTTTGCTGCATGTGGTAGAATCTCTCTCTTCCTCCCACCCCATTAGAATATGGCATGATATCGATTTAGAGTTATGATATTAAGACTAGTATTGATTTGGATGTAGGCGGCCGTCTTTAATCAGACTGATATTGTTTTTGCCCTCATTGAAAGTGGTGCTAGCCTGGACTACAAAAATGCTCAAGGTAACTTCTTGTCACTGTTTCTTTATGCGAATGCTTTTGGTCGGGACTTTGGGAATTGGAGTGTTTAACAAACTGTCTTGAAAATAGAAACTCTTCTGAGAACAAATTTCAAACGACCCTTGCTTATTAGTTCTATCCCACTTCTCTTTTAAGCTTGGCGATTAAAGCAAAGAATAACTGTAGCAAATATCTCTGTGATTGTTTGAGATCCACATCGGTTGGGGAGGAGAAGGAAGCATTCTTTACAAGGGTATGGAAACTTCTCCCTAGCAGATGCGTTTTAAAATCCTTGAAGAGAAGCCCGAAAGAGAAGTCCCAAAGAAGACAATATCTATTAATGGTGGCTTGGACTCTTAGAAATAGTATCAGAGCCAGACACCAGACAATGTGCTAGTGAGGAGGTTGAGCCTTGAAAGAGGATGGACACGAGGCGGTATGCCAGCAAGGACGCTTGGCCTCGAAGGGGGTGAATTTGGGGGTCCCACATCGATTAGAGAAGGGAACGAGTATCAGCGAGGATGCTGGGTCCCAAAGGGGGGTGGATTGTGAGATCTCATATCAGTTGAGGAGGAGAACGAAACATTTTTTTATAAGGGTGTGAAAATCTCTCCCTAATAGACGCATTTTAAAAACCCTTGAGGCGAAACTCGAAAGGGAAAGTTCAAAAGAGAATAATATCTACTAGCGGTGGGCTTGGGCTGTTATTGCACTTACTACAACGAGTAGAAAGCCACGAAGTATGGGTAGCTTTCTAAATTACAGCGACATTGATGATCCGATCCTTTATTTTCGTCCTTCAAACCACAATCCTTTGGTCGAAAAGGGAACTCGTATTGGACCTCTTTCTAATTTTGACTTAAAAATCTATATTTTTCTGGAGAAAGTGAGTTCATGTTAGAAAAGTGGTGAGATATTTTGCATAATGGTTCATTGTTTCCACGGTGACAGGAGAAACGCCATTGGATTGTGCTCCAGCTTGTTTGCAATATAAGATACGAGAGAAGATGGGAGGAGAGTGAAGAAGCAACAGCCCACATCACCTATTATTCTAGTAAATACTTCTATCATTTCTGCACCACCGCCTTTATCTTTTAATTTTTAAGGAACACGCATGGAGAATTTTGAAACTAATTGAGAAACTAATATAGATTAGGTTTGGTTATATCGTCGATGGATTGGTCGGTCAAACACTCGATGGAGTCTTTGAATCGAAGGTTGACCAAGTTGAGTTCAACAACTTGTGGGTGGGGCGTGATTCAAATCTTTTACCTTTTGGTGATATGTGTTACTCGTTGAGTTGTGCTTAAATATTCCAAAGTTGTTGTGCTATATTTGTCAATAACTTTAGTAGAAAGTTCATTGAACACGCCACACGATGACGAGACAATGCCTACGTGGTAAATTTTAATTAACGTGACAAAATTGAACTTT ACTTATTTATTATAAAGAGTTGCAGCGCCAGTTCTTGAGGAGATCCGCTACCAGTTTCCCTTCTGAGCTCTGCAAAACGGAGCATTTGACTGAGTTCAGCGGTAGGAGGATCGCCGTACTCCGGCGGATAAGACGGTGGTTTCTTGCAGTCAAGATAATCGGAAGCATCGATAGAAGAGTTGGGGAATCGAGAGGATCGAGCGGCGGAGATCACAAAAATGTTGGTGGAGCCTCCTCCTTTCCAGGAAGCAGCGCGCTGTGAAGTCTGCAAATGCAGTTTCAACACCTTCCGACGACGGCATCATTGCCGATGCTGTGGAAGGACGTTGTGCCACGAGCATTCTTCTTTTCAAATGGCCTTGCCGAAGTTCGATATTCATTCCTCTGTTAGAGTTTGTGCTGACTGTTTCAATAACTCCTCTCAATCTAGAGAAGTTGATCGACCACCGTCGTTAGCTGTAGTCGATCAAGTTGCAGATACAGTTTCTCAATTAAACCTTGATGGGAATGTAAATTCTGAGCCTAAGTCAGCTGTGGAGCATCAACCTGCGTTGAGCATTTCAGATTGCAATTGTGGAATGCCATTGTGCATTTGTGTCGCTCCAGTCCAGTCTATGAAAACAGAATCTGTTCCTTTGCAGAAGAAAACAGCTTCCACCTCTACTCAGAACAATTCAAAAGCAAAGAAGACTGATTCCAATCTAAGGAATAGAGGATCTACCTCCAACAGCAAGCTTCGGAATCCTGTATTGAATAGGAATCCTGCAGATGAATCAAGGATCAATTATGAAGCAAGTGGCGAGGGGTTGAGGGAAGCAATCAAGAACGGTGACACTCATGCTGTCAAGAAACTTTTGAGTGAGGGTGTAGATGCAAATTACCATGACAAGCAAGGATTGTCTTTGCTGCATGTGGCGGCCGTCTTTAATCAGACTGATATTGTTTTTGCCCTCATTGAAAGTGGTGCTAGCCTGGACTACAAAAATGCTCAAGGAGAAACGCCATTGGATTGTGCTCCAGCTTGTTTGCAATATAAGATACGAGAGAAGATGGGAGGAGAGTGAAGAAGCAACAGCCCACATCACCTATTATTCTAGTAAATACTTCTATCATTTCTGCACCACCGCCTTTATCTTTTAATTTTTAAGGAACACGCATGGAGAATTTTGAAACTAATTGAGAAACTAATATAGATTAGGTTTGGTTATATCGTCGATGGATTGGTCGGTCAAACACTCGATGGAGTCTTTGAATCGAAGGTTGACCAAGTTGAGTTCAACAACTTGTGGGTGGGGCGTGATTCAAATCTTTTACCTTTTGGTGATATGTGTTACTCGTTGAGTTGTGCTTAAATATTCCAAAGTTGTTGTGCTATATTTGTCAATAACTTTAGTAGAAAGTTCATTGAACACGCCACACGATGACGAGACAATGCCTACGTGGTAAATTTTAATTAACGTGACAAAATTGAACTTT ATGTTGGTGGAGCCTCCTCCTTTCCAGGAAGCAGCGCGCTGTGAAGTCTGCAAATGCAGTTTCAACACCTTCCGACGACGGCATCATTGCCGATGCTGTGGAAGGACGTTGTGCCACGAGCATTCTTCTTTTCAAATGGCCTTGCCGAAGTTCGATATTCATTCCTCTGTTAGAGTTTGTGCTGACTGTTTCAATAACTCCTCTCAATCTAGAGAAGTTGATCGACCACCGTCGTTAGCTGTAGTCGATCAAGTTGCAGATACAGTTTCTCAATTAAACCTTGATGGGAATGTAAATTCTGAGCCTAAGTCAGCTGTGGAGCATCAACCTGCGTTGAGCATTTCAGATTGCAATTGTGGAATGCCATTGTGCATTTGTGTCGCTCCAGTCCAGTCTATGAAAACAGAATCTGTTCCTTTGCAGAAGAAAACAGCTTCCACCTCTACTCAGAACAATTCAAAAGCAAAGAAGACTGATTCCAATCTAAGGAATAGAGGATCTACCTCCAACAGCAAGCTTCGGAATCCTGTATTGAATAGGAATCCTGCAGATGAATCAAGGATCAATTATGAAGCAAGTGGCGAGGGGTTGAGGGAAGCAATCAAGAACGGTGACACTCATGCTGTCAAGAAACTTTTGAGTGAGGGTGTAGATGCAAATTACCATGACAAGCAAGGATTGTCTTTGCTGCATGTGGCGGCCGTCTTTAATCAGACTGATATTGTTTTTGCCCTCATTGAAAGTGGTGCTAGCCTGGACTACAAAAATGCTCAAGGAGAAACGCCATTGGATTGTGCTCCAGCTTGTTTGCAATATAAGATACGAGAGAAGATGGGAGGAGAGTGA MLVEPPPFQEAARCEVCKCSFNTFRRRHHCRCCGRTLCHEHSSFQMALPKFDIHSSVRVCADCFNNSSQSREVDRPPSLAVVDQVADTVSQLNLDGNVNSEPKSAVEHQPALSISDCNCGMPLCICVAPVQSMKTESVPLQKKTASTSTQNNSKAKKTDSNLRNRGSTSNSKLRNPVLNRNPADESRINYEASGEGLREAIKNGDTHAVKKLLSEGVDANYHDKQGLSLLHVAAVFNQTDIVFALIESGASLDYKNAQGETPLDCAPACLQYKIREKMGGE
BLAST of Carg25196 vs. NCBI nr
Match: XP_022929532.1 (vacuolar protein sorting-associated protein 27-like isoform X1 [Cucurbita moschata] >XP_022929540.1 vacuolar protein sorting-associated protein 27-like isoform X1 [Cucurbita moschata]) HSP 1 Score: 500.7 bits (1288), Expect = 3.1e-138 Identity = 281/281 (100.00%), Postives = 281/281 (100.00%), Query Frame = 0
BLAST of Carg25196 vs. NCBI nr
Match: XP_022929548.1 (vacuolar protein sorting-associated protein 27-like isoform X2 [Cucurbita moschata]) HSP 1 Score: 496.5 bits (1277), Expect = 5.9e-137 Identity = 248/281 (88.26%), Postives = 248/281 (88.26%), Query Frame = 0
BLAST of Carg25196 vs. NCBI nr
Match: XP_023531355.1 (potassium channel KOR2-like isoform X2 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 464.2 bits (1193), Expect = 3.3e-127 Identity = 253/284 (89.08%), Postives = 255/284 (89.79%), Query Frame = 0
BLAST of Carg25196 vs. NCBI nr
Match: XP_022929552.1 (potassium channel KOR2-like isoform X3 [Cucurbita moschata]) HSP 1 Score: 460.7 bits (1184), Expect = 3.6e-126 Identity = 261/281 (92.88%), Postives = 261/281 (92.88%), Query Frame = 0
BLAST of Carg25196 vs. NCBI nr
Match: XP_023531352.1 (potassium channel KOR2-like isoform X1 [Cucurbita pepo subsp. pepo] >XP_023531353.1 potassium channel KOR2-like isoform X1 [Cucurbita pepo subsp. pepo] >XP_023531354.1 potassium channel KOR2-like isoform X1 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 455.3 bits (1170), Expect = 1.5e-124 Identity = 256/284 (90.14%), Postives = 258/284 (90.85%), Query Frame = 0
BLAST of Carg25196 vs. TAIR10
Match: AT2G26210.1 (Ankyrin repeat family protein) HSP 1 Score: 159.8 bits (403), Expect = 2.4e-39 Identity = 92/197 (46.70%), Postives = 113/197 (57.36%), Query Frame = 0
BLAST of Carg25196 vs. TAIR10
Match: AT4G18950.1 (Integrin-linked protein kinase family) HSP 1 Score: 50.4 bits (119), Expect = 2.0e-06 Identity = 26/69 (37.68%), Postives = 36/69 (52.17%), Query Frame = 0
BLAST of Carg25196 vs. TAIR10
Match: AT3G14270.1 (phosphatidylinositol-4-phosphate 5-kinase family protein) HSP 1 Score: 49.3 bits (116), Expect = 4.5e-06 Identity = 27/94 (28.72%), Postives = 43/94 (45.74%), Query Frame = 0
BLAST of Carg25196 vs. TAIR10
Match: AT3G02850.1 (STELAR K+ outward rectifier) HSP 1 Score: 48.1 bits (113), Expect = 1.0e-05 Identity = 28/77 (36.36%), Postives = 41/77 (53.25%), Query Frame = 0
BLAST of Carg25196 vs. TAIR10
Match: AT5G37500.1 (gated outwardly-rectifying K+ channel) HSP 1 Score: 47.4 bits (111), Expect = 1.7e-05 Identity = 29/81 (35.80%), Postives = 43/81 (53.09%), Query Frame = 0
BLAST of Carg25196 vs. Swiss-Prot
Match: sp|Q810B6|ANFY1_MOUSE (Rabankyrin-5 OS=Mus musculus OX=10090 GN=Ankfy1 PE=1 SV=2) HSP 1 Score: 67.0 bits (162), Expect = 3.8e-10 Identity = 28/65 (43.08%), Postives = 41/65 (63.08%), Query Frame = 0
BLAST of Carg25196 vs. Swiss-Prot
Match: sp|Q9P2R3|ANFY1_HUMAN (Rabankyrin-5 OS=Homo sapiens OX=9606 GN=ANKFY1 PE=1 SV=2) HSP 1 Score: 65.9 bits (159), Expect = 8.4e-10 Identity = 28/65 (43.08%), Postives = 41/65 (63.08%), Query Frame = 0
BLAST of Carg25196 vs. Swiss-Prot
Match: sp|Q17AN2|LST2_AEDAE (Lateral signaling target protein 2 homolog OS=Aedes aegypti OX=7159 GN=AAEL005241 PE=3 SV=1) HSP 1 Score: 65.1 bits (157), Expect = 1.4e-09 Identity = 29/58 (50.00%), Postives = 34/58 (58.62%), Query Frame = 0
BLAST of Carg25196 vs. Swiss-Prot
Match: sp|B0WAQ0|LST2_CULQU (Lateral signaling target protein 2 homolog OS=Culex quinquefasciatus OX=7176 GN=CPIJ004116 PE=3 SV=1) HSP 1 Score: 64.7 bits (156), Expect = 1.9e-09 Identity = 29/58 (50.00%), Postives = 34/58 (58.62%), Query Frame = 0
BLAST of Carg25196 vs. Swiss-Prot
Match: sp|Q7QAJ2|LST2_ANOGA (Lateral signaling target protein 2 homolog OS=Anopheles gambiae OX=7165 GN=AGAP003678 PE=3 SV=6) HSP 1 Score: 63.2 bits (152), Expect = 5.5e-09 Identity = 27/58 (46.55%), Postives = 34/58 (58.62%), Query Frame = 0
BLAST of Carg25196 vs. TrEMBL
Match: tr|A0A0A0LWS8|A0A0A0LWS8_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G598850 PE=4 SV=1) HSP 1 Score: 365.5 bits (937), Expect = 1.0e-97 Identity = 222/281 (79.00%), Postives = 233/281 (82.92%), Query Frame = 0
BLAST of Carg25196 vs. TrEMBL
Match: tr|A0A1S4DY61|A0A1S4DY61_CUCME (LOW QUALITY PROTEIN: vacuolar protein sorting-associated protein 27 OS=Cucumis melo OX=3656 GN=LOC103492539 PE=4 SV=1) HSP 1 Score: 363.6 bits (932), Expect = 4.0e-97 Identity = 195/282 (69.15%), Postives = 209/282 (74.11%), Query Frame = 0
BLAST of Carg25196 vs. TrEMBL
Match: tr|A0A061GLV4|A0A061GLV4_THECC (Ankyrin repeat and SOCS box protein 9 OS=Theobroma cacao OX=3641 GN=TCM_037430 PE=4 SV=1) HSP 1 Score: 334.0 bits (855), Expect = 3.4e-88 Identity = 192/284 (67.61%), Postives = 225/284 (79.23%), Query Frame = 0
BLAST of Carg25196 vs. TrEMBL
Match: tr|A0A1U8M120|A0A1U8M120_GOSHI (hepatocyte growth factor-regulated tyrosine kinase substrate OS=Gossypium hirsutum OX=3635 GN=LOC107932882 PE=4 SV=1) HSP 1 Score: 324.3 bits (830), Expect = 2.7e-85 Identity = 162/284 (57.04%), Postives = 197/284 (69.37%), Query Frame = 0
BLAST of Carg25196 vs. TrEMBL
Match: tr|A0A0D2N4Y1|A0A0D2N4Y1_GOSRA (Uncharacterized protein OS=Gossypium raimondii OX=29730 GN=B456_004G285800 PE=4 SV=1) HSP 1 Score: 324.3 bits (830), Expect = 2.7e-85 Identity = 162/284 (57.04%), Postives = 197/284 (69.37%), Query Frame = 0
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07
The following gene(s) are orthologous to this gene: The following gene(s) are paralogous to this gene:
The following block(s) are covering this gene: None |