Carg25164 (gene) Silver-seed gourd | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Carg25164
Type	gene
Organism	Cucurbita argyrosperma (Silver-seed gourd)
Description	36.4 kDa proline-rich protein
Location	Cucurbita_argyrosperma_scaffold_199 : 66352 .. 67092 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCTTCCAAATCTTCAGCCATGTTCTTCATCCTCTTAATCTCCATGGCCTTATCATTGCCACCAATTTACGCTTGTACTCCTTGCACCCAGCCCCACCCTCCTTACCCGCCCTACCACCGCCCTTCCCACCCTAAAATTCCACATCCAAAACCCCACCATCCACCCCACCATGGTGGAGGTGGAGGCGGAGGAGGCGGCGGTGGTGGCAGCCGTGGAGGAGGTGGTGGAGGTGGGGGAGGTGGTAGTCGAGGAGGTGGTGGCGGTGGAGGTGGAGGTGGAGGGGGAGGTCATCAACACCCACCTATTGTGATTCCCCCACCAGTGATCACCCCTTCACCACCATCCACCACTTACCCTCCTTACACTGGCCCTCCTCCAAGCGGCGGAGGTGGTGGTGGTGGAGGAGGAGGAGGAGGAGGAGGCGGAGGAAGTGGTGGTTCAGGTTCAGGGCAATACCCACCGCCTCCAGCTCAACCAACATGTCCAATAGATGCATTGAAGCTAGGGTTATGTGTGGATGTGCTTGGAGGGTTGGTGCATATTGGGTTAGGGAATCCAGTGGAGAATGCATGCTGTCCAGTGCTTGGAGGGCTGTTGGAGCTTGAAGCAGCCATATGTCTATGCACAACTTTAAGGATTAAGCTTTTGAATCTCAATATATTCATTCCTTTGGCCCTTCAAGCGCTCATCACTTGTGGCAAGAACCCTCCGCCAGGCTTTGTTTGTCCTCCACTTTAG

mRNA sequence

ATGGCTTCCAAATCTTCAGCCATGTTCTTCATCCTCTTAATCTCCATGGCCTTATCATTGCCACCAATTTACGCTTGTACTCCTTGCACCCAGCCCCACCCTCCTTACCCGCCCTACCACCGCCCTTCCCACCCTAAAATTCCACATCCAAAACCCCACCATCCACCCCACCATGGTGGAGGTGGAGGCGGAGGAGGCGGCGGTGGTGGCAGCCGTGGAGGAGGTGGTGGAGGTGGGGGAGGTGGTAGTCGAGGAGGTGGTGGCGGTGGAGGTGGAGGTGGAGGGGGAGGTCATCAACACCCACCTATTGTGATTCCCCCACCAGTGATCACCCCTTCACCACCATCCACCACTTACCCTCCTTACACTGGCCCTCCTCCAAGCGGCGGAGGTGGTGGTGGTGGAGGAGGAGGAGGAGGAGGAGGCGGAGGAAGTGGTGGTTCAGGTTCAGGGCAATACCCACCGCCTCCAGCTCAACCAACATGTCCAATAGATGCATTGAAGCTAGGGTTATGTGTGGATGTGCTTGGAGGGTTGGTGCATATTGGGTTAGGGAATCCAGTGGAGAATGCATGCTGTCCAGTGCTTGGAGGGCTGTTGGAGCTTGAAGCAGCCATATGTCTATGCACAACTTTAAGGATTAAGCTTTTGAATCTCAATATATTCATTCCTTTGGCCCTTCAAGCGCTCATCACTTGTGGCAAGAACCCTCCGCCAGGCTTTGTTTGTCCTCCACTTTAG

Coding sequence (CDS)

ATGGCTTCCAAATCTTCAGCCATGTTCTTCATCCTCTTAATCTCCATGGCCTTATCATTGCCACCAATTTACGCTTGTACTCCTTGCACCCAGCCCCACCCTCCTTACCCGCCCTACCACCGCCCTTCCCACCCTAAAATTCCACATCCAAAACCCCACCATCCACCCCACCATGGTGGAGGTGGAGGCGGAGGAGGCGGCGGTGGTGGCAGCCGTGGAGGAGGTGGTGGAGGTGGGGGAGGTGGTAGTCGAGGAGGTGGTGGCGGTGGAGGTGGAGGTGGAGGGGGAGGTCATCAACACCCACCTATTGTGATTCCCCCACCAGTGATCACCCCTTCACCACCATCCACCACTTACCCTCCTTACACTGGCCCTCCTCCAAGCGGCGGAGGTGGTGGTGGTGGAGGAGGAGGAGGAGGAGGAGGCGGAGGAAGTGGTGGTTCAGGTTCAGGGCAATACCCACCGCCTCCAGCTCAACCAACATGTCCAATAGATGCATTGAAGCTAGGGTTATGTGTGGATGTGCTTGGAGGGTTGGTGCATATTGGGTTAGGGAATCCAGTGGAGAATGCATGCTGTCCAGTGCTTGGAGGGCTGTTGGAGCTTGAAGCAGCCATATGTCTATGCACAACTTTAAGGATTAAGCTTTTGAATCTCAATATATTCATTCCTTTGGCCCTTCAAGCGCTCATCACTTGTGGCAAGAACCCTCCGCCAGGCTTTGTTTGTCCTCCACTTTAG

Protein sequence

MASKSSAMFFILLISMALSLPPIYACTPCTQPHPPYPPYHRPSHPKIPHPKPHHPPHHGGGGGGGGGGGGSRGGGGGGGGGGSRGGGGGGGGGGGGGHQHPPIVIPPPVITPSPPSTTYPPYTGPPPSGGGGGGGGGGGGGGGGSGGSGSGQYPPPPAQPTCPIDALKLGLCVDVLGGLVHIGLGNPVENACCPVLGGLLELEAAICLCTTLRIKLLNLNIFIPLALQALITCGKNPPPGFVCPPL

Homology

[Close]

BLAST of Carg25164 vs. NCBI nr
Match: XP_022943159.1 (36.4 kDa proline-rich protein-like [Cucurbita moschata])

HSP 1 Score: 199.5 bits (506), Expect = 1.3e-47
Identity = 246/246 (100.00%), Postives = 246/246 (100.00%), Query Frame = 0


Query: 1   MASKSSAMFFILLISMALSLPPIYACTPXXXXXXXXXXXXXXXXXXIPHPKPXXXXXXXX 60
           MASKSSAMFFILLISMALSLPPIYACTPXXXXXXXXXXXXXXXXXXIPHPKPXXXXXXXX
Sbjct: 1   MASKSSAMFFILLISMALSLPPIYACTPXXXXXXXXXXXXXXXXXXIPHPKPXXXXXXXX 60

Query: 61  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 120
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 61  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 120

Query: 121 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQPTCPIDALKLGLCVDVLGGLV 180
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQPTCPIDALKLGLCVDVLGGLV
Sbjct: 121 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQPTCPIDALKLGLCVDVLGGLV 180

Query: 181 HIGLGNPVENACCPVLGGLLELEAAICLCTTLRIKLLNLNIFIPLALQALITCGKNPPPG 240
           HIGLGNPVENACCPVLGGLLELEAAICLCTTLRIKLLNLNIFIPLALQALITCGKNPPPG
Sbjct: 181 HIGLGNPVENACCPVLGGLLELEAAICLCTTLRIKLLNLNIFIPLALQALITCGKNPPPG 240

Query: 241 FVCPPL 247
           FVCPPL
Sbjct: 241 FVCPPL 246

[Close]

BLAST of Carg25164 vs. NCBI nr
Match: XP_023540189.1 (36.4 kDa proline-rich protein-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 195.3 bits (495), Expect = 2.5e-46
Identity = 244/246 (99.19%), Postives = 244/246 (99.19%), Query Frame = 0


Query: 1   MASKSSAMFFILLISMALSLPPIYACTPXXXXXXXXXXXXXXXXXXIPHPKPXXXXXXXX 60
           MASKSSAMFFILLISMALSLPPIYACTPXXXXXXXXXXXXXXXXXXIPHPKP  XXXXXX
Sbjct: 1   MASKSSAMFFILLISMALSLPPIYACTPXXXXXXXXXXXXXXXXXXIPHPKP--XXXXXX 60

Query: 61  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 120
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 61  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 120

Query: 121 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQPTCPIDALKLGLCVDVLGGLV 180
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQPTCPIDALKLGLCVDVLGGLV
Sbjct: 121 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQPTCPIDALKLGLCVDVLGGLV 180

Query: 181 HIGLGNPVENACCPVLGGLLELEAAICLCTTLRIKLLNLNIFIPLALQALITCGKNPPPG 240
           HIGLGNPVENACCPVLGGLLELEAAICLCTTLRIKLLNLNIFIPLALQALITCGKNPPPG
Sbjct: 181 HIGLGNPVENACCPVLGGLLELEAAICLCTTLRIKLLNLNIFIPLALQALITCGKNPPPG 240

Query: 241 FVCPPL 247
           FVCPPL
Sbjct: 241 FVCPPL 244

[Close]

BLAST of Carg25164 vs. NCBI nr
Match: XP_023005518.1 (36.4 kDa proline-rich protein-like [Cucurbita maxima])

HSP 1 Score: 194.5 bits (493), Expect = 4.2e-46
Identity = 244/246 (99.19%), Postives = 244/246 (99.19%), Query Frame = 0


Query: 1   MASKSSAMFFILLISMALSLPPIYACTPXXXXXXXXXXXXXXXXXXIPHPKPXXXXXXXX 60
           MASKSSAMFFILLISMALSLPPIYACTPXXXXXXXXXXXXXXXXXX  HPKPXXXXXXXX
Sbjct: 1   MASKSSAMFFILLISMALSLPPIYACTPXXXXXXXXXXXXXXXXXXXXHPKPXXXXXXXX 60

Query: 61  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 120
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 61  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 120

Query: 121 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQPTCPIDALKLGLCVDVLGGLV 180
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQPTCPIDALKLGLCVDVLGGLV
Sbjct: 121 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQPTCPIDALKLGLCVDVLGGLV 180

Query: 181 HIGLGNPVENACCPVLGGLLELEAAICLCTTLRIKLLNLNIFIPLALQALITCGKNPPPG 240
           HIGLGNPVENACCPVLGGLLELEAAICLCTTLRIKLLNLNIFIPLALQALITCGKNPPPG
Sbjct: 181 HIGLGNPVENACCPVLGGLLELEAAICLCTTLRIKLLNLNIFIPLALQALITCGKNPPPG 240

Query: 241 FVCPPL 247
           FVCPPL
Sbjct: 241 FVCPPL 246

[Close]

BLAST of Carg25164 vs. NCBI nr
Match: XP_008448869.1 (PREDICTED: 36.4 kDa proline-rich protein [Cucumis melo])

HSP 1 Score: 183.7 bits (465), Expect = 7.4e-43
Identity = 88/88 (100.00%), Postives = 88/88 (100.00%), Query Frame = 0


Query: 159 QPTCPIDALKLGLCVDVLGGLVHIGLGNPVENACCPVLGGLLELEAAICLCTTLRIKLLN 218
           QPTCPIDALKLGLCVDVLGGLVHIGLGNPVENACCPVLGGLLELEAAICLCTTLRIKLLN
Sbjct: 142 QPTCPIDALKLGLCVDVLGGLVHIGLGNPVENACCPVLGGLLELEAAICLCTTLRIKLLN 201

Query: 219 LNIFIPLALQALITCGKNPPPGFVCPPL 247
           LNIFIPLALQALITCGKNPPPGFVCPPL
Sbjct: 202 LNIFIPLALQALITCGKNPPPGFVCPPL 229

[Close]

BLAST of Carg25164 vs. NCBI nr
Match: XP_004151037.2 (PREDICTED: 36.4 kDa proline-rich protein [Cucumis sativus] >KGN55879.1 hypothetical protein Csa_3G026150 [Cucumis sativus])

HSP 1 Score: 181.8 bits (460), Expect = 2.8e-42
Identity = 220/261 (84.29%), Postives = 222/261 (85.06%), Query Frame = 0


Query: 1   MASKSSAMFFILLISMALSLPPIYACTPXXXXXXXXXXXXXXXXXXIPHPKP-------- 60
           M SK+SAMFFIL I MALSLPPIYACTP                  IPHPKP        
Sbjct: 2   MGSKASAMFFILSIFMALSLPPIYACTPCTQPHPPQPPYHRPSHPKIPHPKPHPXXXXXX 61

Query: 61  -------XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 120
                  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX  XXXXXXXXXXXXXXXXXX
Sbjct: 62  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXIVXXXXXXXXXXXXXXXXXX 121

Query: 121 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQPTCPID 180
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX QPTCPID
Sbjct: 122 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVQPTCPID 181

Query: 181 ALKLGLCVDVLGGLVHIGLGNPVENACCPVLGGLLELEAAICLCTTLRIKLLNLNIFIPL 240
           ALKLGLCVDVLGGLVHIGLGNPVENACCPVLGGLLELEAA+CLCTTLRIKLLNLNIFIPL
Sbjct: 182 ALKLGLCVDVLGGLVHIGLGNPVENACCPVLGGLLELEAAVCLCTTLRIKLLNLNIFIPL 241

Query: 241 ALQALITCGKNPPPGFVCPPL 247
           ALQALITCGKNPPPGFVCPPL
Sbjct: 242 ALQALITCGKNPPPGFVCPPL 262

[Close]

BLAST of Carg25164 vs. TAIR10
Match: AT1G62500.1 (Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein)

HSP 1 Score: 164.9 bits (416), Expect = 6.5e-41
Identity = 77/87 (88.51%), Postives = 82/87 (94.25%), Query Frame = 0


Query: 160 PTCPIDALKLGLCVDVLGGLVHIGLGNPVENACCPVLGGLLELEAAICLCTTLRIKLLNL 219
           PTCPI+ALKLG CVDVLGGL+HIGLGNPVEN CCPVL GLLELEAA+CLCTT+R+KLLNL
Sbjct: 210 PTCPINALKLGACVDVLGGLIHIGLGNPVENVCCPVLQGLLELEAAVCLCTTIRLKLLNL 269

Query: 220 NIFIPLALQALITCGKNPPPGFVCPPL 247
           NIFIPLALQALITCG NPP GFVCPPL
Sbjct: 270 NIFIPLALQALITCGINPPSGFVCPPL 296

[Close]

BLAST of Carg25164 vs. TAIR10
Match: AT2G10940.1 (Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein)

HSP 1 Score: 133.7 bits (335), Expect = 1.6e-31
Identity = 58/83 (69.88%), Postives = 72/83 (86.75%), Query Frame = 0


Query: 161 TCPIDALKLGLCVDVLGGLVHIGLGNPVENACCPVLGGLLELEAAICLCTTLRIKLLNLN 220
           TCPID LKLG CVD+LGGLV IGLG+P  N CCP+L GL+E+EAA CLCTTL++K L+LN
Sbjct: 207 TCPIDTLKLGACVDLLGGLVKIGLGDPAVNKCCPLLKGLVEVEAAACLCTTLKLKALDLN 266

Query: 221 IFIPLALQALITCGKNPPPGFVC 244
           +++P+ALQ L+TCGKNPPPG+ C
Sbjct: 267 LYVPVALQLLLTCGKNPPPGYTC 289

[Close]

BLAST of Carg25164 vs. TAIR10
Match: AT3G22142.1 (Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein)

HSP 1 Score: 130.2 bits (326), Expect = 1.8e-30
Identity = 54/84 (64.29%), Postives = 71/84 (84.52%), Query Frame = 0


Query: 161  TCPIDALKLGLCVDVLGGLVHIGLGNPVENACCPVLGGLLELEAAICLCTTLRIKLLNLN 220
            TCPID LKLG CVD+LGGLVHIG+G   +  CCPV+ GL++L+AA+CLCTT++ KLLN++
Sbjct: 1396 TCPIDTLKLGSCVDLLGGLVHIGIGKSAKEKCCPVVEGLVDLDAAVCLCTTIKAKLLNID 1455

Query: 221  IFIPLALQALITCGKNPPPGFVCP 245
            + +P+AL+ L+ CGKNPPPGF CP
Sbjct: 1456 VILPIALEVLLNCGKNPPPGFKCP 1479

[Close]

BLAST of Carg25164 vs. TAIR10
Match: AT3G22120.1 (cell wall-plasma membrane linker protein)

HSP 1 Score: 122.1 bits (305), Expect = 4.8e-28
Identity = 55/84 (65.48%), Postives = 69/84 (82.14%), Query Frame = 0


Query: 162 CPIDALKLGLCVDVLGGLVHIGLGNPVENA-CCPVLGGLLELEAAICLCTTLRIKLLNLN 221
           CPID LKLG CVDVLGGL+HIGLG     A CCPVLGGLL+L+AA+CLCTT+++KLLN++
Sbjct: 250 CPIDTLKLGACVDVLGGLIHIGLGKSHAKAECCPVLGGLLDLDAAVCLCTTIKLKLLNID 309

Query: 222 IFIPLALQALITCGKNPPPGFVCP 245
           + +P+AL+ L+ CGK PP  F CP
Sbjct: 310 LVLPIALELLLDCGKTPPSDFKCP 333

[Close]

BLAST of Carg25164 vs. TAIR10
Match: AT4G15160.1 (Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein)

HSP 1 Score: 120.6 bits (301), Expect = 1.4e-27
Identity = 57/86 (66.28%), Postives = 69/86 (80.23%), Query Frame = 0


Query: 161 TCPIDALKLGLCVDVLGGLVHIGLGNPVENA-CCPVLGGLLELEAAICLCTTLRIKLLNL 220
           TCPIDALKLG CVDVLGGL+HIGLG     A CCP+L  L+ L+AA+CLCTT+R KLLN+
Sbjct: 180 TCPIDALKLGACVDVLGGLIHIGLGKSYAKAKCCPLLDDLVGLDAAVCLCTTIRAKLLNI 239

Query: 221 NIFIPLALQALITCGKNPPP-GFVCP 245
           ++ IP+AL+ L+ CGK PPP GF CP
Sbjct: 240 DLIIPIALEVLVDCGKTPPPRGFKCP 265

[Close]

BLAST of Carg25164 vs. Swiss-Prot
Match: sp|Q00451|PRF1_SOLLC (36.4 kDa proline-rich protein OS=Solanum lycopersicum OX=4081 GN=TPRP-F1 PE=2 SV=1)

HSP 1 Score: 119.8 bits (299), Expect = 4.3e-26
Identity = 55/81 (67.90%), Postives = 67/81 (82.72%), Query Frame = 0


Query: 165 DALKLGLCVDVLGGLVHIGLGNPVENACCPVLGGLLELEAAICLCTTLRIKLLNLNIFIP 224
           DALKLG CVDVLGGL+HIG+G   +  CCP+LGGL++L+AAICLCTT+R+KLLN+NI +P
Sbjct: 264 DALKLGACVDVLGGLIHIGIGGSAKQTCCPLLGGLVDLDAAICLCTTIRLKLLNINIILP 323

Query: 225 LALQALI-TCGKNPPPGFVCP 245
           +ALQ LI  CGK PP  F CP
Sbjct: 324 IALQVLIDDCGKYPPKDFKCP 344

[Close]

BLAST of Carg25164 vs. Swiss-Prot
Match: sp|Q9SU35|ERLL1_ARATH (pEARLI1-like lipid transfer protein 1 OS=Arabidopsis thaliana OX=3702 GN=AZI1 PE=1 SV=1)

HSP 1 Score: 89.4 bits (220), Expect = 6.2e-17
Identity = 40/84 (47.62%), Postives = 59/84 (70.24%), Query Frame = 0


Query: 161 TCPIDALKLGLCVDVLGGLVHIGLGNPVENACCPVLGGLLELEAAICLCTTLRIKLLNLN 220
           +CPIDALKLG+C +VL  L++I LG P    CC ++ GL++++AAICLCT LR  +L +N
Sbjct: 77  SCPIDALKLGVCANVLSSLLNIQLGQPSSQQCCSLIQGLVDVDAAICLCTALRANVLGIN 136

Query: 221 IFIPLALQALI-TCGKNPPPGFVC 244
           + +P++L  L+  C +  P GF C
Sbjct: 137 LNVPISLSVLLNVCNRKLPSGFQC 160

[Close]

BLAST of Carg25164 vs. Swiss-Prot
Match: sp|Q39176|ERLI1_ARATH (Lipid transfer protein EARLI 1 OS=Arabidopsis thaliana OX=3702 GN=EARLI1 PE=1 SV=1)

HSP 1 Score: 88.6 bits (218), Expect = 1.1e-16
Identity = 40/83 (48.19%), Postives = 58/83 (69.88%), Query Frame = 0


Query: 162 CPIDALKLGLCVDVLGGLVHIGLGNPVENACCPVLGGLLELEAAICLCTTLRIKLLNLNI 221
           CPIDAL+LG+C +VL  L++I LG P    CC ++ GL++L+AAICLCT LR  +L +N+
Sbjct: 85  CPIDALRLGVCANVLSSLLNIQLGQPSAQPCCSLIQGLVDLDAAICLCTALRANVLGINL 144

Query: 222 FIPLALQALI-TCGKNPPPGFVC 244
            +P++L  L+  C +  P GF C
Sbjct: 145 NVPISLSVLLNVCNRKVPSGFQC 167

[Close]

BLAST of Carg25164 vs. Swiss-Prot
Match: sp|Q9SU34|ERLL2_ARATH (pEARLI1-like lipid transfer protein 2 OS=Arabidopsis thaliana OX=3702 GN=At4g12490 PE=2 SV=1)

HSP 1 Score: 87.4 bits (215), Expect = 2.4e-16
Identity = 38/83 (45.78%), Postives = 58/83 (69.88%), Query Frame = 0


Query: 162 CPIDALKLGLCVDVLGGLVHIGLGNPVENACCPVLGGLLELEAAICLCTTLRIKLLNLNI 221
           CPIDAL+LG+C +VL GL+++ LG P    CC ++ GL++L+AA+CLCT LR  +L +N+
Sbjct: 99  CPIDALRLGVCANVLSGLLNVQLGQPSPQPCCSLIQGLVDLDAAVCLCTALRANVLGINL 158

Query: 222 FIPLALQALI-TCGKNPPPGFVC 244
            +P++L  L+  C +  P  F C
Sbjct: 159 NVPISLSVLLNVCNRRLPSNFQC 181

[Close]

BLAST of Carg25164 vs. Swiss-Prot
Match: sp|Q9SU33|ERLL3_ARATH (pEARLI1-like lipid transfer protein 3 OS=Arabidopsis thaliana OX=3702 GN=At4g12500 PE=2 SV=1)

HSP 1 Score: 87.4 bits (215), Expect = 2.4e-16
Identity = 39/83 (46.99%), Postives = 58/83 (69.88%), Query Frame = 0


Query: 162 CPIDALKLGLCVDVLGGLVHIGLGNPVENACCPVLGGLLELEAAICLCTTLRIKLLNLNI 221
           CPIDAL+LG+C +VL GL+++ LG P    CC ++ GL++L+AAICLCT LR  +L +N+
Sbjct: 94  CPIDALRLGVCANVLSGLLNVQLGQPSAQPCCSLIQGLVDLDAAICLCTALRANVLGINL 153

Query: 222 FIPLALQALI-TCGKNPPPGFVC 244
            +P++L  L+  C +  P  F C
Sbjct: 154 NVPISLSVLLNVCNRRLPSDFQC 176

[Close]

BLAST of Carg25164 vs. TrEMBL
Match: tr|A0A1S3BLB9|A0A1S3BLB9_CUCME (36.4 kDa proline-rich protein OS=Cucumis melo OX=3656 GN=LOC103490902 PE=4 SV=1)

HSP 1 Score: 183.7 bits (465), Expect = 4.9e-43
Identity = 88/88 (100.00%), Postives = 88/88 (100.00%), Query Frame = 0


Query: 159 QPTCPIDALKLGLCVDVLGGLVHIGLGNPVENACCPVLGGLLELEAAICLCTTLRIKLLN 218
           QPTCPIDALKLGLCVDVLGGLVHIGLGNPVENACCPVLGGLLELEAAICLCTTLRIKLLN
Sbjct: 142 QPTCPIDALKLGLCVDVLGGLVHIGLGNPVENACCPVLGGLLELEAAICLCTTLRIKLLN 201

Query: 219 LNIFIPLALQALITCGKNPPPGFVCPPL 247
           LNIFIPLALQALITCGKNPPPGFVCPPL
Sbjct: 202 LNIFIPLALQALITCGKNPPPGFVCPPL 229

[Close]

BLAST of Carg25164 vs. TrEMBL
Match: tr|A0A0A0L4A6|A0A0A0L4A6_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G026150 PE=4 SV=1)

HSP 1 Score: 181.8 bits (460), Expect = 1.9e-42
Identity = 220/261 (84.29%), Postives = 222/261 (85.06%), Query Frame = 0


Query: 1   MASKSSAMFFILLISMALSLPPIYACTPXXXXXXXXXXXXXXXXXXIPHPKP-------- 60
           M SK+SAMFFIL I MALSLPPIYACTP                  IPHPKP        
Sbjct: 2   MGSKASAMFFILSIFMALSLPPIYACTPCTQPHPPQPPYHRPSHPKIPHPKPHPXXXXXX 61

Query: 61  -------XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 120
                  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX  XXXXXXXXXXXXXXXXXX
Sbjct: 62  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXIVXXXXXXXXXXXXXXXXXX 121

Query: 121 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQPTCPID 180
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX QPTCPID
Sbjct: 122 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVQPTCPID 181

Query: 181 ALKLGLCVDVLGGLVHIGLGNPVENACCPVLGGLLELEAAICLCTTLRIKLLNLNIFIPL 240
           ALKLGLCVDVLGGLVHIGLGNPVENACCPVLGGLLELEAA+CLCTTLRIKLLNLNIFIPL
Sbjct: 182 ALKLGLCVDVLGGLVHIGLGNPVENACCPVLGGLLELEAAVCLCTTLRIKLLNLNIFIPL 241

Query: 241 ALQALITCGKNPPPGFVCPPL 247
           ALQALITCGKNPPPGFVCPPL
Sbjct: 242 ALQALITCGKNPPPGFVCPPL 262

[Close]

BLAST of Carg25164 vs. TrEMBL
Match: tr|A0A061G475|A0A061G475_THECC (Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein OS=Theobroma cacao OX=3641 GN=TCM_016002 PE=4 SV=1)

HSP 1 Score: 175.3 bits (443), Expect = 1.7e-40
Identity = 81/88 (92.05%), Postives = 86/88 (97.73%), Query Frame = 0


Query: 159 QPTCPIDALKLGLCVDVLGGLVHIGLGNPVENACCPVLGGLLELEAAICLCTTLRIKLLN 218
           QPTCP++ALKLGLCVDVLGGLVHIGLGNPVENACCPVLGGLLELEAA+CLCT +R+KLLN
Sbjct: 152 QPTCPVNALKLGLCVDVLGGLVHIGLGNPVENACCPVLGGLLELEAAVCLCTAIRLKLLN 211

Query: 219 LNIFIPLALQALITCGKNPPPGFVCPPL 247
           L IFIPLALQALITCGKNPPPGFVCPPL
Sbjct: 212 LTIFIPLALQALITCGKNPPPGFVCPPL 239

[Close]

BLAST of Carg25164 vs. TrEMBL
Match: tr|A0A1R3GAR4|A0A1R3GAR4_COCAP (Uncharacterized protein OS=Corchorus capsularis OX=210143 GN=CCACVL1_27367 PE=4 SV=1)

HSP 1 Score: 175.3 bits (443), Expect = 1.7e-40
Identity = 81/88 (92.05%), Postives = 86/88 (97.73%), Query Frame = 0


Query: 159 QPTCPIDALKLGLCVDVLGGLVHIGLGNPVENACCPVLGGLLELEAAICLCTTLRIKLLN 218
           QPTCP++ALKLGLCVDVLGGLVHIGLGNPVENACCPVLGGLLELEAA+CLCT +R+KLLN
Sbjct: 155 QPTCPVNALKLGLCVDVLGGLVHIGLGNPVENACCPVLGGLLELEAAVCLCTAIRLKLLN 214

Query: 219 LNIFIPLALQALITCGKNPPPGFVCPPL 247
           LNIFIPLALQALITCGK PPPGFVCPPL
Sbjct: 215 LNIFIPLALQALITCGKTPPPGFVCPPL 242

[Close]

BLAST of Carg25164 vs. TrEMBL
Match: tr|A0A1R3G2X7|A0A1R3G2X7_9ROSI (Uncharacterized protein OS=Corchorus olitorius OX=93759 GN=COLO4_37196 PE=4 SV=1)

HSP 1 Score: 175.3 bits (443), Expect = 1.7e-40
Identity = 81/88 (92.05%), Postives = 86/88 (97.73%), Query Frame = 0


Query: 159 QPTCPIDALKLGLCVDVLGGLVHIGLGNPVENACCPVLGGLLELEAAICLCTTLRIKLLN 218
           QPTCP++ALKLGLCVDVLGGLVHIGLGNPVENACCPVLGGLLELEAA+CLCT +R+KLLN
Sbjct: 150 QPTCPVNALKLGLCVDVLGGLVHIGLGNPVENACCPVLGGLLELEAAVCLCTAIRLKLLN 209

Query: 219 LNIFIPLALQALITCGKNPPPGFVCPPL 247
           LNIFIPLALQALITCGK PPPGFVCPPL
Sbjct: 210 LNIFIPLALQALITCGKTPPPGFVCPPL 237

The following BLAST results are available for this feature:

BLAST of Carg25164 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022943159.1	1.3e-47	100.00	36.4 kDa proline-rich protein-like [Cucurbita moschata]	[more]
XP_023540189.1	2.5e-46	99.19	36.4 kDa proline-rich protein-like [Cucurbita pepo subsp. pepo]	[more]
XP_023005518.1	4.2e-46	99.19	36.4 kDa proline-rich protein-like [Cucurbita maxima]	[more]
XP_008448869.1	7.4e-43	100.00	PREDICTED: 36.4 kDa proline-rich protein [Cucumis melo]	[more]
XP_004151037.2	2.8e-42	84.29	PREDICTED: 36.4 kDa proline-rich protein [Cucumis sativus] >KGN55879.1 hypotheti...	[more]

BLAST of Carg25164 vs. TAIR10


Match Name	E-value	Identity	Description
AT1G62500.1	6.5e-41	88.51	Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamil...	[more]
AT2G10940.1	1.6e-31	69.88	Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamil...	[more]
AT3G22142.1	1.8e-30	64.29	Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamil...	[more]
AT3G22120.1	4.8e-28	65.48	cell wall-plasma membrane linker protein	[more]
AT4G15160.1	1.4e-27	66.28	Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamil...	[more]

BLAST of Carg25164 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|Q00451\|PRF1_SOLLC	4.3e-26	67.90	36.4 kDa proline-rich protein OS=Solanum lycopersicum OX=4081 GN=TPRP-F1 PE=2 SV...	[more]
sp\|Q9SU35\|ERLL1_ARATH	6.2e-17	47.62	pEARLI1-like lipid transfer protein 1 OS=Arabidopsis thaliana OX=3702 GN=AZI1 PE...	[more]
sp\|Q39176\|ERLI1_ARATH	1.1e-16	48.19	Lipid transfer protein EARLI 1 OS=Arabidopsis thaliana OX=3702 GN=EARLI1 PE=1 SV...	[more]
sp\|Q9SU34\|ERLL2_ARATH	2.4e-16	45.78	pEARLI1-like lipid transfer protein 2 OS=Arabidopsis thaliana OX=3702 GN=At4g124...	[more]
sp\|Q9SU33\|ERLL3_ARATH	2.4e-16	46.99	pEARLI1-like lipid transfer protein 3 OS=Arabidopsis thaliana OX=3702 GN=At4g125...	[more]

BLAST of Carg25164 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A1S3BLB9\|A0A1S3BLB9_CUCME	4.9e-43	100.00	36.4 kDa proline-rich protein OS=Cucumis melo OX=3656 GN=LOC103490902 PE=4 SV=1	[more]
tr\|A0A0A0L4A6\|A0A0A0L4A6_CUCSA	1.9e-42	84.29	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G026150 PE=4 SV=1	[more]
tr\|A0A061G475\|A0A061G475_THECC	1.7e-40	92.05	Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamil...	[more]
tr\|A0A1R3GAR4\|A0A1R3GAR4_COCAP	1.7e-40	92.05	Uncharacterized protein OS=Corchorus capsularis OX=210143 GN=CCACVL1_27367 PE=4 ...	[more]
tr\|A0A1R3G2X7\|A0A1R3G2X7_9ROSI	1.7e-40	92.05	Uncharacterized protein OS=Corchorus olitorius OX=93759 GN=COLO4_37196 PE=4 SV=1	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR036312	Bifun_inhib/LTP/seed_sf
IPR027923	Hydrophob_seed

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg25164-RA	Carg25164-RA	mRNA

InterPro

Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR027923	Hydrophobic seed protein	PFAM	PF14547	Hydrophob_seed	coord: 161..244 e-value: 3.8E-26 score: 91.0
IPR027923	Hydrophobic seed protein	CDD	cd01958	HPS_like	coord: 164..243 e-value: 5.67162E-19 score: 77.754
None	No IPR available	GENE3D	G3DSA:1.10.110.10		coord: 157..245 e-value: 8.3E-20 score: 72.3
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 36..159
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 101..127
None	No IPR available	PANTHER	PTHR31731:SF25	BIFUNCTIONAL INHIBITOR/LIPID-TRANSFER PROTEIN/SEED STORAGE 2S ALBUMIN SUPERFAMILY PROTEIN	coord: 1..60
None	No IPR available	PANTHER	PTHR31731:SF25	BIFUNCTIONAL INHIBITOR/LIPID-TRANSFER PROTEIN/SEED STORAGE 2S ALBUMIN SUPERFAMILY PROTEIN	coord: 101..245
None	No IPR available	PANTHER	PTHR31731	FAMILY NOT NAMED	coord: 1..60 coord: 101..245
IPR036312	Bifunctional inhibitor/plant lipid transfer protein/seed storage helical domain superfamily	SUPERFAMILY	SSF47699	Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin	coord: 164..245

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Carg25164	Cla005657	Watermelon (97103) v1	carwmB0526
Carg25164	Csa3G021150	Cucumber (Chinese Long) v2	carcuB0559
Carg25164	MELO3C013958	Melon (DHL92) v3.5.1	carmeB0535
Carg25164	ClCG10G002840	Watermelon (Charleston Gray)	carwcgB0513
Carg25164	CSPI03G02820	Wild cucumber (PI 183967)	carcpiB0565
Carg25164	Cucsa.320790	Cucumber (Gy14) v1	carcgyB0609
Carg25164	CmaCh06G007710	Cucurbita maxima (Rimu)	carcmaB0742
Carg25164	CmoCh06G007920	Cucurbita moschata (Rifu)	carcmoB0720
Carg25164	Lsi07G013120	Bottle gourd (USVL1VR-Ls)	carlsiB482
Carg25164	Cp4.1LG08g07460	Cucurbita pepo (Zucchini)	carcpeB0750
Carg25164	CsGy3G002750	Cucumber (Gy14) v2	carcgybB0536
Carg25164	MELO3C013952.2	Melon (DHL92) v3.6.1	carmedB0540
Carg25164	CsaV3_3G002860	Cucumber (Chinese Long) v3	carcucB0567
Carg25164	Cla97C10G187370	Watermelon (97103) v2	carwmbB0555
Carg25164	Bhi11G000178	Wax gourd	carwgoB0640

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:

None