Carg25124 (gene) Silver-seed gourd | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Carg25124
Type	gene
Organism	Cucurbita argyrosperma (Silver-seed gourd)
Description	ER membrane protein complex subunit 3
Location	Cucurbita_argyrosperma_scaffold_211 : 131094 .. 137512 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATTTAAATAGTAATTCATAAATTCTGCAACAGTCTTAACCCTCTCCCTTCCGCGACGGACAAAACATCAAACATTCCAGTTGTGAAGCCCTCTTGGCCTTCGTAGTTCGATTCTCAACGGAGCTCGCAGATCGGATCCAGTCATGGCGGAAGATCTAGTTCTCGACACTGCCATCAGAGATTGGGTGCTGATTCCGCTCTCCGTGGTCATGGTTCTCATCGGAGTTCTCCGCTACTTTGTCTCCAAGCTTATGCGCTCGTCTCCAGTCCCCGATGCCAAAGTCGTACGAGAAGGGTAAAATTAGATTCATAATCTTCAGAATTCGTACATTATTCATCTTGTAAGTTCTTGACGCATTTTTTAATTCCGGATTTCAGGCAAATCGTACTTAGGGCTCGGAATTTACGATCTGCTGCTAATTTTATTCCCCAGAAGTCGTTTCGATCCCGCAGAGTTTATTACGGCAACGAGGTTTGTTTTCCTCTTTTTTCAATGTAGTATGTGATGCGTGCCAAATTTAATTCATTAAACCTTTTTAGAGGAATCGTTTTCGATGTCCATTGTACTTGAATGATGCGTATGGTGTAGAAGGTTTAGTTTCTGCTTCGAGATTCAACTGGCGTTATGACGTGCAGTCAGAACTGTTATAAGAGCTCTTTGTTTCTATTAGCTTGTTAAATTCAGTTTAGTCAAGTTGTGTATCTGTTAGTCTTCTTGATTTGTTTAATTTGTTGAAAATTAGTTAACACTCCTCCTCGTTAAAGCTTGTAATTCCTCTGTATTTGATATCTGAGATTTGATTCAATAAGGAGTCTCCTCAAGATTCATTTGATGGTATCAGAGGAAGCTTTAATAGGTTAAAGTTTATGAGATACCAATCGTATTTTCTCGAAGGGATACAAGCAGCTTATAGTTATTAGAGAAGAATCCTGGATTGACAGATAGAGTATTATGCAATGTCCATAAGATTTTATCAGTTGTAACTTGTATGATTTATTGCATCCTTGAATATGGTGACGTGAGGATGCCATAAATTGTGCTGCCAATGGGAATCTATGTGTGAGGATGGTTGCAGTGAGATTGTATATCTTGTAGAATGATTTTGATGCAACTATGATATTCAAAGTAGCACAGGAGGATAAAGAGAATCTGATACCCTAGATATTCTACATATGCAATTGGCAGGAGAACGGACTGCTCTTTGTTCCCAAAGGCCAGGCCCAAAATGCACAAGCACAGATGTTTTCGGATCCAAACATGGCAATGGATATGATGAAGAAGAATCTCTCCATGATTATACCTCAGGTGACTATAGTTGCATATTCGATCACTATTCTTTTCACTGATATCATATGAAGTTCAATTTACATTTTTATTTATCCTTTCTTCTTTGCTAGACCCTAACTTTTGCGTGGGTCAACTTTTTCTTCTCCGGATTTGTAGCAGGTATGTTCTTCATACTACTATACTTTTGAATGCCCGAGGGTAACTTTTTTTGGTTGAGTGAATCTCCAAGTTATCTAGATTATATAAATTCCATACTTTTTAGGTGTTAAATGGTATGTTCTAGCACTAATTATGTTTTTTAATACATGGGAACTTTGTACGATTATTTAGATCTCTTATTTACTATATCTTTCTGTTTCTCTGCCATTTCCCCCCTCCATTTCTGATAGTTGGTTATAACTGGTAGAAAAAGTTTTCAGGTTTCTTATTTTTGTGCACTGAAAGCTGATTTTTCTACCTGTGTTAGTATCACTTTTCTTTTCAGCCTCCAATTTGTGGCATCTAATCGTATCTTCTCTCCTTATCTAGCAAAAATACCCTTTCCACTGACTCAGAGGTTCCGGTCGATGTTACAAAATGGGATTGATTTGAGTACTGTGGATGTCAGCTATGTCAGTAGCCGATCATGGTACTTTCCAAGATCCATTAAATATTATGGTGCCTGTGTTACCGTCATCTGAAGATTTTTTTTTTTTTTTTTTTTTTTTTTTTTGTCAAGTTTTTCCCTAAGCATTTGGTTGGATGATTATCACTGATAGTTTTATGTAACTTATGTCAGGTACTTTCTAAATTTGTTTGGATTAAGAGGTTTATTCAGTCTCATTCTGGGAGAAGAAAATGGTTGGTTTTTCTGCTTAACAACTCCATTTATTCTTTAACTGATGCGTGTATGGATTTTTTCCCCAAGAAGTAGCATTTTGAAAGATCCAGATCTTATACTGTGACTTATGACAAAACAATTCTTGGTGCAGCAATGGATGACACACAGAGAATGATGCAAATGTCTGGTTTTGGCATGGACCCAACAAAGGTAAATATTTAGTCTTTACTACCCGGTATTTCAAACATCTTTCTTCATTTTTAGGCTGTCAAAGGATGTTTAAAGTATTCATATTCATTATTCAAAACGCTCTCCCTGTTTCTGTCTCTCTTTAAATCTACATATGCATACACTCATATACGGAAGTTTGCATTAGCATGCAAATCAAGTTTCATGGTTGAACAGTTTTGATCTCCTGTGTACATGTGTATGTATATATTTGAACTGACACATCATTTTTTTGTTTAAAATCTTCTAAACTGGCATGGCTGGCTGTGTTACATTTGTTTCTTATTCTTCTACCTGTGAAATTAACTAAGCTTGAAGGAAGCTGCACATATTTTAGTGGTTCAGTTTCAAAATTTGGCTCAGAGTACATATTGTTAATGGATAGATTTTGTTGAGTCTGTTTATCAGTGTTCATGGTTGTTTGCTGTATCATTCTAAATGAGTATTGACTATGTATTTATACATGATATCTTGCACGGTTGTGCAGTCTATCGTCTTGATTGTGTACATTAATTTTGTGAGGATCCCTTTTGGGTTGAACTTGCAAGTTTCAATGTGATAGCTGATAACTTGGGTTGATTAGCATTTTTGTATCTGCTCAATCTTGCACTAGCTCTCTAGGAGAAGATTGTTGTCGTACATGAGGTTCCCTAGTGCTGTTACCAGGTCAATTTGGCATAGAGCAGTTCGCCTATGGCTATGGAATTAGATGAAAAGACTTGTATAGAGATTGGGATATTTTTATGTGAAGAAATGTAGGGATTCAAAGATCTATTGATGGAGCAAATGGATTCGATATTCCAATGTATGCAAGATGCTTTATGAGATGCAATTGCACAATCTTTCAAGGAAACTCGAGAGGATATTGCAGATGTAGAAAAGAATAAAGCAGAGGCTAAACAAATTGAGTAGGAAAAATAGTATGAAAGCCCGAAGAAAAACAAGGAATAGCAAGATAATCGGGCTAAGTAAAAAGATCTTCAGTCAAATCCTTAGAGGCTGCGAAGGAGCATTGCAAATTGTCTGAGGTTGTAAGATGAAGCAAATGCAAAAAATGATAATGAGTGAGAGGTCATACAAAAGAGATAGAGGGGAGGCAAACCTAAATTTTTTTGGAGTTTGAAAACGACCCGCAAATGGGCTGCAAAGATACCCAACACAACAAAGGTCTGTTTTCCAAAGAGAGGTCGACCATTGATGGTTTCGTGGAAAGAGGTGAAATTGTGGAGAGGGCGATGCTTCAACTGCTGCGAAGTTCGAAGAAGGTGGATCATCATGATGAAACTGGAGAAAAGGAGATGAAAAACTGATGGAAGCCATGGTCGACGATGAAGCCTGTTATGGTCGGAAAAAATGAATTGGTGGGGGAGATGCTGACCCAGGCATCGTGAAGAGGCACAGAGAAATCAGAGGTTGGCGGTCATGAAGAAAAGGAGAATAAAAGAAGAAAAGTACCTAACGTAGGCCGTCACCAGCAGTGAGTGCAGGCATGCATGGAGATGAAAACTTGGGAAAGACACCAAAGCAATTTGTGTGGAGATGGGCACGTGGGTATGAGGATTGTTACTAGTGGTTAAGTGCCTTGCGAAAAGAAAGAAGGTTCTGGAAGTGAGTGGGGCCTGCAGCTTCATTTAAATGAATTGATGAGGCTCGCAGTCGTGTTGCGGCCTATTTTGAATTTCAAAGGAATACAAAGCAACGAAAGCATGGTGGGTTTGAAAATGATCAAATGAAGTGTGTGGAAGAAAAATCTGGAATTGTGGAACCGTGGGCTAGAAAAACTATTTCCAGAATGGACTGAATTTAAAGAAATTGGATGAGGCCCATTGCGCCAGAATGTTTTCAAGACTAAGTTTTAACTTTCAACTAGTTGGCATTTTTTTTTTCCTTTCATATTTGTTTCTACCCACACCTCGGGTGTGTTCTAGAGGCGGGTGAAAGGAATACTACAAGAAGGAAATTATGGATATTAAAGGGTATATGAGTAATTAGTTAGGGAGTTTGTTATGCTTGTTCGTTGTGAATGGGTGGGGGGATGAGTGAATTAGGCCTTGAGAGTGATCTTAGGAGGGGAGGGTCCATGACATGGTAACCCTAGGCAATTGGATCCCCTCGAAACCCTCATGGATATGAAAAACCTCCAAATCAAGTTGATTTCATTCCAAATGATTGCAACTCTTGGGAATTCTATCCAACAATCTTATTGAAGTATATGACCTTCCATGTATTTCAAGAGTTGTAACCTTCGAACTTTATGACTCATTCCTTCAAAATTTCATTATGAAATCTTAAACTCCCCGTGACATGAATCTCTTTATTGGAAAGAGCCCATCCTATCAGCAATTAAAAACATTTTCTGGTGCACTCCCTGCTGACCTTCCTGGTGCCCTCTCTGCTGACCTTCCTGGTGCTTGGTTTTGTGTTACAGCTATCTACATGTATATGCTGTTCAATCAATTGGTTCCTAGTTTGACGTGGATTTTATCTGTTAGGAAAAGTAGTATGTTCTGAAGAAGCCTGGTTTTCTTTTAAGTGGTAGAATACTGTCGTGGGTGAATGACTGACTATGACAAGAAATATATATTGGAATATAGTACCACCAGTTGCATTTTGGTCTCTTTTTTTTCTAGTTTGATTTGCACAATCTGGCAGAGAATGAAACGATATGAATTGGAGGATCAAGATAACATTTGGGGCTGGAAGGAAATGTAATTGTGGTTGAAATGCTAAATTGTATTGCTTTTGAAATGGGGGTAAATAAACATTATAGATTTCAAGCCAGAATTGGAGATACAGGTGGTTCTTGGCCTTCGTTTGTGATTAGCCCTACTTCTTTCTGGTTGTAGACTGGACAAGCTTTTAGTTATCCTGACTTCCCTATTGCTCGTTGACTTGGAAATGATATCACCGAAAAGCACTGAAGTTGAAAACTTGACAAAATGCTTATTTTTTTATTTGCAAACAAACATCTTGTTGGTGCACTGTTTCAAAATGTATAATGTAGGTCCCGTCATTCTCCTCTTATTCTACTTTTATATTTTAGGCTCATTTGTCGCTATGTTACCTGCTTGATGTGCCCATATAAGCTAGTTTCATCTTAAATTTCGTTACGTCCTTGCATCCGAGGTGTAAACGAAGCTCCATCTGAAACCTCGTTATTCTTTTTTGTCACAGCAATTGCTCAGATGCTTCAATCAAATTTGATTGATTATACCAGTGGGGATGTGCGAATTGTCTTCGATGTTCTAATTGATTTTCAACTTTAAGCAGCTCACTTTATAGGGTTCTAGGAAATACTTTATTTCTTAAAATCTGGGCCTCAGTGATTCCTTCTTTGCCAACTTCTTTATTGGGTCAATCATTTGTACGTTACTGGCTAGTGGTCATTTAGGCCGTTGTTTCAAAGTAAACCTAGACCAACGCAACTCGATGTTCTTTGTAGTCCTTCTTTAACAAATCTCTATTCTAATATTTAGTTTAATTGTTTACTTGTTAAGAAATATAATTGATCGACATAACCTTTGTGAACCTTGAATTGATCATTATTCAAAATCTCTACTCTTCTGCTGATCTTAATGGAATTGCATTTTATTGCCAGGGGTTGAGTGCCGAGAAAGACAACTTAGACATAGTGCAGCATGAATGGGTCTTACCCAAGTTTGAGCATCGCGCTGAAGCTGTGTTGAGAAAGATCGTCAGCTGATCGGTTTCTCTGTCACAGGTCTTCTACTAGTAAATTTTCTCTGGTTGTTACGATTTAGATACTTTTTTTTTTGAGATTGTCGTGAAACATAGAAATCTGTTTTTATCAACCATGGATATTGTAACACTAAATTATTTTTAGACAACTAATAGGATTTTTCCAAGTCATGCACAATCAATTCTTATAAGGATACCGTTTAAAGATGGAATGCAATAATGACGTTGAAATTTGCTGGAGGGAATATAAGTCTCTCTCTCTAACACGCGCATGCACACCAGCACCGCGCGCACGCACACTCGCATGCGCACCCGCACACCGCACACGCACACTACTCTTAGAGTATAAGTCAGCACACGCACACTCACATGCACACTACTCTTA

mRNA sequence

ATTTAAATAGTAATTCATAAATTCTGCAACAGTCTTAACCCTCTCCCTTCCGCGACGGACAAAACATCAAACATTCCAGTTGTGAAGCCCTCTTGGCCTTCGTAGTTCGATTCTCAACGGAGCTCGCAGATCGGATCCAGTCATGGCGGAAGATCTAGTTCTCGACACTGCCATCAGAGATTGGGTGCTGATTCCGCTCTCCGTGGTCATGGTTCTCATCGGAGTTCTCCGCTACTTTGTCTCCAAGCTTATGCGCTCGTCTCCAGTCCCCGATGCCAAAGTCGTACGAGAAGGGCAAATCGTACTTAGGGCTCGGAATTTACGATCTGCTGCTAATTTTATTCCCCAGAAGTCGTTTCGATCCCGCAGAGTTTATTACGGCAACGAGGAGAACGGACTGCTCTTTGTTCCCAAAGGCCAGGCCCAAAATGCACAAGCACAGATGTTTTCGGATCCAAACATGGCAATGGATATGATGAAGAAGAATCTCTCCATGATTATACCTCAGACCCTAACTTTTGCGTGGGTCAACTTTTTCTTCTCCGGATTTGTAGCAGCAAAAATACCCTTTCCACTGACTCAGAGGTTCCGGTCGATGTTACAAAATGGGATTGATTTGAGTACTGTGGATGTCAGCTATGTCAGTAGCCGATCATGGTACTTTCTAAATTTGTTTGGATTAAGAGGTTTATTCAGTCTCATTCTGGGAGAAGAAAATGCAATGGATGACACACAGAGAATGATGCAAATGTCTGGTTTTGGCATGGACCCAACAAAGGGGTTGAGTGCCGAGAAAGACAACTTAGACATAGTGCAGCATGAATGGGTCTTACCCAAGTTTGAGCATCGCGCTGAAGCTGTGTTGAGAAAGATCGTCAGCTGATCGGTTTCTCTGTCACAGGTCTTCTACTAGTAAATTTTCTCTGGTTGTTACGATTTAGATACTTTTTTTTTTGAGATTGTCGTGAAACATAGAAATCTGTTTTTATCAACCATGGATATTGTAACACTAAATTATTTTTAGACAACTAATAGGATTTTTCCAAGTCATGCACAATCAATTCTTATAAGGATACCGTTTAAAGATGGAATGCAATAATGACGTTGAAATTTGCTGGAGGGAATATAAGTCTCTCTCTCTAACACGCGCATGCACACCAGCACCGCGCGCACGCACACTCGCATGCGCACCCGCACACCGCACACGCACACTACTCTTAGAGTATAAGTCAGCACACGCACACTCACATGCACACTACTCTTA

Coding sequence (CDS)

ATGGCGGAAGATCTAGTTCTCGACACTGCCATCAGAGATTGGGTGCTGATTCCGCTCTCCGTGGTCATGGTTCTCATCGGAGTTCTCCGCTACTTTGTCTCCAAGCTTATGCGCTCGTCTCCAGTCCCCGATGCCAAAGTCGTACGAGAAGGGCAAATCGTACTTAGGGCTCGGAATTTACGATCTGCTGCTAATTTTATTCCCCAGAAGTCGTTTCGATCCCGCAGAGTTTATTACGGCAACGAGGAGAACGGACTGCTCTTTGTTCCCAAAGGCCAGGCCCAAAATGCACAAGCACAGATGTTTTCGGATCCAAACATGGCAATGGATATGATGAAGAAGAATCTCTCCATGATTATACCTCAGACCCTAACTTTTGCGTGGGTCAACTTTTTCTTCTCCGGATTTGTAGCAGCAAAAATACCCTTTCCACTGACTCAGAGGTTCCGGTCGATGTTACAAAATGGGATTGATTTGAGTACTGTGGATGTCAGCTATGTCAGTAGCCGATCATGGTACTTTCTAAATTTGTTTGGATTAAGAGGTTTATTCAGTCTCATTCTGGGAGAAGAAAATGCAATGGATGACACACAGAGAATGATGCAAATGTCTGGTTTTGGCATGGACCCAACAAAGGGGTTGAGTGCCGAGAAAGACAACTTAGACATAGTGCAGCATGAATGGGTCTTACCCAAGTTTGAGCATCGCGCTGAAGCTGTGTTGAGAAAGATCGTCAGCTGA

Protein sequence

MAEDLVLDTAIRDWVLIPLSVVMVLIGVLRYFVSKLMRSSPVPDAKVVREGQIVLRARNLRSAANFIPQKSFRSRRVYYGNEENGLLFVPKGQAQNAQAQMFSDPNMAMDMMKKNLSMIIPQTLTFAWVNFFFSGFVAAKIPFPLTQRFRSMLQNGIDLSTVDVSYVSSRSWYFLNLFGLRGLFSLILGEENAMDDTQRMMQMSGFGMDPTKGLSAEKDNLDIVQHEWVLPKFEHRAEAVLRKIVS

Homology

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BLAST of Carg25124 vs. NCBI nr
Match: XP_023001598.1 (ER membrane protein complex subunit 3 [Cucurbita maxima] >XP_023519748.1 ER membrane protein complex subunit 3 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 483.4 bits (1243), Expect = 4.5e-133
Identity = 246/246 (100.00%), Postives = 246/246 (100.00%), Query Frame = 0


Query: 1   MAEDLVLDTAIRDWVLIPLSVVMVLIGVLRYFVSKLMRSSPVPDAKVVREGQIVLRARNL 60
           MAEDLVLDTAIRDWVLIPLSVVMVLIGVLRYFVSKLMRSSPVPDAKVVREGQIVLRARNL
Sbjct: 1   MAEDLVLDTAIRDWVLIPLSVVMVLIGVLRYFVSKLMRSSPVPDAKVVREGQIVLRARNL 60

Query: 61  RSAANFIPQKSFRSRRVYYGNEENGLLFVPKGQAQNAQAQMFSDPNMAMDMMKKNLSMII 120
           RSAANFIPQKSFRSRRVYYGNEENGLLFVPKGQAQNAQAQMFSDPNMAMDMMKKNLSMII
Sbjct: 61  RSAANFIPQKSFRSRRVYYGNEENGLLFVPKGQAQNAQAQMFSDPNMAMDMMKKNLSMII 120

Query: 121 PQTLTFAWVNFFFSGFVAAKIPFPLTQRFRSMLQNGIDLSTVDVSYVSSRSWYFLNLFGL 180
           PQTLTFAWVNFFFSGFVAAKIPFPLTQRFRSMLQNGIDLSTVDVSYVSSRSWYFLNLFGL
Sbjct: 121 PQTLTFAWVNFFFSGFVAAKIPFPLTQRFRSMLQNGIDLSTVDVSYVSSRSWYFLNLFGL 180

Query: 181 RGLFSLILGEENAMDDTQRMMQMSGFGMDPTKGLSAEKDNLDIVQHEWVLPKFEHRAEAV 240
           RGLFSLILGEENAMDDTQRMMQMSGFGMDPTKGLSAEKDNLDIVQHEWVLPKFEHRAEAV
Sbjct: 181 RGLFSLILGEENAMDDTQRMMQMSGFGMDPTKGLSAEKDNLDIVQHEWVLPKFEHRAEAV 240

Query: 241 LRKIVS 247
           LRKIVS
Sbjct: 241 LRKIVS 246

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BLAST of Carg25124 vs. NCBI nr
Match: XP_022927570.1 (ER membrane protein complex subunit 3 [Cucurbita moschata])

HSP 1 Score: 483.0 bits (1242), Expect = 5.9e-133
Identity = 245/246 (99.59%), Postives = 246/246 (100.00%), Query Frame = 0


Query: 1   MAEDLVLDTAIRDWVLIPLSVVMVLIGVLRYFVSKLMRSSPVPDAKVVREGQIVLRARNL 60
           MAEDLVLDTAIRDWVLIPLSVVMVLIGVLRYFVSKLMRSSPVPDAKVVREGQIVLRARNL
Sbjct: 1   MAEDLVLDTAIRDWVLIPLSVVMVLIGVLRYFVSKLMRSSPVPDAKVVREGQIVLRARNL 60

Query: 61  RSAANFIPQKSFRSRRVYYGNEENGLLFVPKGQAQNAQAQMFSDPNMAMDMMKKNLSMII 120
           RSAANFIPQKSFRSRRVYYGNEENGLLFVPKGQAQNAQAQMFSDPNMAMDMMKKNLSMII
Sbjct: 61  RSAANFIPQKSFRSRRVYYGNEENGLLFVPKGQAQNAQAQMFSDPNMAMDMMKKNLSMII 120

Query: 121 PQTLTFAWVNFFFSGFVAAKIPFPLTQRFRSMLQNGIDLSTVDVSYVSSRSWYFLNLFGL 180
           PQTLTFAWVNFFFSGFVAAKIPFPLTQRFRSMLQNGIDLSTVDVSYVSSRSWYFLNLFGL
Sbjct: 121 PQTLTFAWVNFFFSGFVAAKIPFPLTQRFRSMLQNGIDLSTVDVSYVSSRSWYFLNLFGL 180

Query: 181 RGLFSLILGEENAMDDTQRMMQMSGFGMDPTKGLSAEKDNLDIVQHEWVLPKFEHRAEAV 240
           RGLFSLILGEENAMDDTQRMMQMSGFGMDPTKGLSAEKDNLDIVQHEWVLPKFEHRAEAV
Sbjct: 181 RGLFSLILGEENAMDDTQRMMQMSGFGMDPTKGLSAEKDNLDIVQHEWVLPKFEHRAEAV 240

Query: 241 LRKIVS 247
           LRKI+S
Sbjct: 241 LRKIIS 246

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BLAST of Carg25124 vs. NCBI nr
Match: XP_008458952.1 (PREDICTED: ER membrane protein complex subunit 3 [Cucumis melo])

HSP 1 Score: 480.3 bits (1235), Expect = 3.8e-132
Identity = 244/246 (99.19%), Postives = 245/246 (99.59%), Query Frame = 0


Query: 1   MAEDLVLDTAIRDWVLIPLSVVMVLIGVLRYFVSKLMRSSPVPDAKVVREGQIVLRARNL 60
           MAEDLVLDTAIRDWVLIPLSVVMVLIGVLRYFVSKLMRSSPVPDAKVVREGQIVLRARNL
Sbjct: 1   MAEDLVLDTAIRDWVLIPLSVVMVLIGVLRYFVSKLMRSSPVPDAKVVREGQIVLRARNL 60

Query: 61  RSAANFIPQKSFRSRRVYYGNEENGLLFVPKGQAQNAQAQMFSDPNMAMDMMKKNLSMII 120
           RSAANFIP KSFRSRRVYYGNEENGLL+VPKGQAQNAQAQMFSDPNMAMDMMKKNLSMII
Sbjct: 61  RSAANFIPHKSFRSRRVYYGNEENGLLYVPKGQAQNAQAQMFSDPNMAMDMMKKNLSMII 120

Query: 121 PQTLTFAWVNFFFSGFVAAKIPFPLTQRFRSMLQNGIDLSTVDVSYVSSRSWYFLNLFGL 180
           PQTLTFAWVNFFFSGFVAAKIPFPLTQRFRSMLQNGIDLSTVDVSYVSSRSWYFLNLFGL
Sbjct: 121 PQTLTFAWVNFFFSGFVAAKIPFPLTQRFRSMLQNGIDLSTVDVSYVSSRSWYFLNLFGL 180

Query: 181 RGLFSLILGEENAMDDTQRMMQMSGFGMDPTKGLSAEKDNLDIVQHEWVLPKFEHRAEAV 240
           RGLFSLILGEENAMDDTQRMMQMSGFGMDPTKGLSAEKDNLDIVQHEWVLPKFEHRAEAV
Sbjct: 181 RGLFSLILGEENAMDDTQRMMQMSGFGMDPTKGLSAEKDNLDIVQHEWVLPKFEHRAEAV 240

Query: 241 LRKIVS 247
           LRKIVS
Sbjct: 241 LRKIVS 246

[Close]

BLAST of Carg25124 vs. NCBI nr
Match: XP_004139548.1 (PREDICTED: ER membrane protein complex subunit 3 [Cucumis sativus])

HSP 1 Score: 479.9 bits (1234), Expect = 5.0e-132
Identity = 243/246 (98.78%), Postives = 245/246 (99.59%), Query Frame = 0


Query: 1   MAEDLVLDTAIRDWVLIPLSVVMVLIGVLRYFVSKLMRSSPVPDAKVVREGQIVLRARNL 60
           MAEDLVLDTAIRDWVLIPLSVVMVLIGVLRYFVSKLMRSSPVPDAKVVREGQIVLRARNL
Sbjct: 1   MAEDLVLDTAIRDWVLIPLSVVMVLIGVLRYFVSKLMRSSPVPDAKVVREGQIVLRARNL 60

Query: 61  RSAANFIPQKSFRSRRVYYGNEENGLLFVPKGQAQNAQAQMFSDPNMAMDMMKKNLSMII 120
           RSAANFIP KSFRSRR+YYGNEENGLL+VPKGQAQNAQAQMFSDPNMAMDMMKKNLSMII
Sbjct: 61  RSAANFIPHKSFRSRRIYYGNEENGLLYVPKGQAQNAQAQMFSDPNMAMDMMKKNLSMII 120

Query: 121 PQTLTFAWVNFFFSGFVAAKIPFPLTQRFRSMLQNGIDLSTVDVSYVSSRSWYFLNLFGL 180
           PQTLTFAWVNFFFSGFVAAKIPFPLTQRFRSMLQNGIDLSTVDVSYVSSRSWYFLNLFGL
Sbjct: 121 PQTLTFAWVNFFFSGFVAAKIPFPLTQRFRSMLQNGIDLSTVDVSYVSSRSWYFLNLFGL 180

Query: 181 RGLFSLILGEENAMDDTQRMMQMSGFGMDPTKGLSAEKDNLDIVQHEWVLPKFEHRAEAV 240
           RGLFSLILGEENAMDDTQRMMQMSGFGMDPTKGLSAEKDNLDIVQHEWVLPKFEHRAEAV
Sbjct: 181 RGLFSLILGEENAMDDTQRMMQMSGFGMDPTKGLSAEKDNLDIVQHEWVLPKFEHRAEAV 240

Query: 241 LRKIVS 247
           LRKIVS
Sbjct: 241 LRKIVS 246

[Close]

BLAST of Carg25124 vs. NCBI nr
Match: XP_022142524.1 (ER membrane protein complex subunit 3 [Momordica charantia])

HSP 1 Score: 475.3 bits (1222), Expect = 1.2e-130
Identity = 241/246 (97.97%), Postives = 243/246 (98.78%), Query Frame = 0


Query: 1   MAEDLVLDTAIRDWVLIPLSVVMVLIGVLRYFVSKLMRSSPVPDAKVVREGQIVLRARNL 60
           MAEDLVLDTAIRDWVLIPLSVVMVLIGVLRYFVSKLMRSSPVPDAKVVREGQIVLRARNL
Sbjct: 1   MAEDLVLDTAIRDWVLIPLSVVMVLIGVLRYFVSKLMRSSPVPDAKVVREGQIVLRARNL 60

Query: 61  RSAANFIPQKSFRSRRVYYGNEENGLLFVPKGQAQNAQAQMFSDPNMAMDMMKKNLSMII 120
           R+ ANFIP KSFRSRRVYYGNEENGLL+VPKGQAQNAQAQMFSDPNMAMDMMKKNLSMII
Sbjct: 61  RAGANFIPLKSFRSRRVYYGNEENGLLYVPKGQAQNAQAQMFSDPNMAMDMMKKNLSMII 120

Query: 121 PQTLTFAWVNFFFSGFVAAKIPFPLTQRFRSMLQNGIDLSTVDVSYVSSRSWYFLNLFGL 180
           PQTLTFAWVNFFFSGFVAAKIPFPLTQRFRSMLQNGIDLSTVDVSYVSSRSWYFLNLFGL
Sbjct: 121 PQTLTFAWVNFFFSGFVAAKIPFPLTQRFRSMLQNGIDLSTVDVSYVSSRSWYFLNLFGL 180

Query: 181 RGLFSLILGEENAMDDTQRMMQMSGFGMDPTKGLSAEKDNLDIVQHEWVLPKFEHRAEAV 240
           RGLFSLILGEENAMDDTQRMMQMSGFGMDPTKGLSAEKDNLDIVQHEWVLPKFEHRAEAV
Sbjct: 181 RGLFSLILGEENAMDDTQRMMQMSGFGMDPTKGLSAEKDNLDIVQHEWVLPKFEHRAEAV 240

Query: 241 LRKIVS 247
           LRK VS
Sbjct: 241 LRKFVS 246

[Close]

BLAST of Carg25124 vs. TAIR10
Match: AT4G12590.1 (Protein of unknown function DUF106, transmembrane)

HSP 1 Score: 427.6 bits (1098), Expect = 5.4e-120
Identity = 211/245 (86.12%), Postives = 228/245 (93.06%), Query Frame = 0


Query: 1   MAEDLVLDTAIRDWVLIPLSVVMVLIGVLRYFVSKLMRSSPVPDAKVVREGQIVLRARNL 60
           MAEDLVLDTAIRDWVLIPLSVVMVLIG+LRYFVSKLMRS+P PDAK+V+EGQ+V+RARNL
Sbjct: 1   MAEDLVLDTAIRDWVLIPLSVVMVLIGILRYFVSKLMRSTPTPDAKMVKEGQVVIRARNL 60

Query: 61  RSAANFIPQKSFRSRRVYYGNEENGLLFVPKGQAQNAQAQMFSDPNMAMDMMKKNLSMII 120
           +  ANFIP KSFR+RR Y+ NEENGLL VPKG+AQN QA MFSDPNMAMDMMKKNLSMII
Sbjct: 61  KVGANFIPPKSFRARRFYFSNEENGLLHVPKGEAQNPQAAMFSDPNMAMDMMKKNLSMII 120

Query: 121 PQTLTFAWVNFFFSGFVAAKIPFPLTQRFRSMLQNGIDLSTVDVSYVSSRSWYFLNLFGL 180
           PQTLTFAWVNFFFSGFVAAKIPFPLTQRFRSMLQNGIDLSTVDVSYVSSRSWYFLNLFGL
Sbjct: 121 PQTLTFAWVNFFFSGFVAAKIPFPLTQRFRSMLQNGIDLSTVDVSYVSSRSWYFLNLFGL 180

Query: 181 RGLFSLILGEENAMDDTQRMMQMSGFGMDPTKGLSAEKDNLDIVQHEWVLPKFEHRAEAV 240
           RGLFSLILG+ENA+DDTQRMMQM GFG D +K L AEKD LDI+QHEW LP+FE RAE+V
Sbjct: 181 RGLFSLILGDENAIDDTQRMMQMGGFGFDASKSLGAEKDGLDIIQHEWALPRFEQRAESV 240

Query: 241 LRKIV 246
           LRK+V
Sbjct: 241 LRKLV 245

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BLAST of Carg25124 vs. Swiss-Prot
Match: sp|Q7SXW4|EMC3_DANRE (ER membrane protein complex subunit 3 OS=Danio rerio OX=7955 GN=emc3 PE=2 SV=1)

HSP 1 Score: 199.5 bits (506), Expect = 4.3e-50
Identity = 104/240 (43.33%), Postives = 157/240 (65.42%), Query Frame = 0


Query: 1   MAE-DLVLDTAIRDWVLIPLSVVMVLIGVLRYFVSKLMRSSPVPDAKVVREGQIVLRARN 60
           MAE +L+LD+ IR WV++P+  +  L+GV+R++VS L++S      + V + Q+++R+R 
Sbjct: 1   MAEPELLLDSNIRLWVVLPIVFITFLVGVIRHYVSILLQSDKKLTLEQVSDSQVLIRSRV 60

Query: 61  LRSAANFIPQKSFRSRRVYYGNEENGLLFVPKGQAQNAQAQMFSDPNMAMDMMKKNLSMI 120
           LR    +IP++SF  R+ Y+ N+E+G  F  K + +       +DP+M  DMMK N++ +
Sbjct: 61  LRENGKYIPKQSFLMRKFYFNNQEDG--FFKKTKRKVVPPSPMTDPSMLTDMMKGNVTNV 120

Query: 121 IPQTLTFAWVNFFFSGFVAAKIPFPLTQRFRSMLQNGIDLSTVDVSYVSSRSWYFLNLFG 180
           +P  L   W+N+ FSGFV  K+PFPLT RF+ MLQ GI+L ++D S+VSS SWYFLN+FG
Sbjct: 121 LPMILIGGWINWTFSGFVTTKVPFPLTLRFKPMLQQGIELLSLDASWVSSASWYFLNVFG 180

Query: 181 LRGLFSLILGEENAMDDTQRMM-QMSGFGM----DPTKGLSAEKDNLDIVQHEWVLPKFE 235
           LR ++SLILG++N  D ++ M  QMSG  M    D  K   AE + L++  H+W L   E
Sbjct: 181 LRSMYSLILGQDNGADQSRIMQEQMSGAAMAMPADTNKAFKAEWEALELTDHQWALENVE 238

[Close]

BLAST of Carg25124 vs. Swiss-Prot
Match: sp|Q9P0I2|EMC3_HUMAN (ER membrane protein complex subunit 3 OS=Homo sapiens OX=9606 GN=EMC3 PE=1 SV=3)

HSP 1 Score: 197.6 bits (501), Expect = 1.6e-49
Identity = 100/241 (41.49%), Postives = 153/241 (63.49%), Query Frame = 0


Query: 4   DLVLDTAIRDWVLIPLSVVMVLIGVLRYFVSKLMRSSPVPDAKVVREGQIVLRARNLRSA 63
           +L+LD+ IR WV++P+ ++   +G++R++VS L++S      + V + Q+++R+R LR  
Sbjct: 5   ELLLDSNIRLWVVLPIVIITFFVGMIRHYVSILLQSDKKLTQEQVSDSQVLIRSRVLREN 64

Query: 64  ANFIPQKSFRSRRVYYGNEENGLLFVPKGQAQNAQAQMFSDPNMAMDMMKKNLSMIIPQT 123
             +IP++SF +R+ Y+ N E+G  F  K + +       +DP M  DMMK N++ ++P  
Sbjct: 65  GKYIPKQSFLTRKYYFNNPEDG--FFKKTKRKVVPPSPMTDPTMLTDMMKGNVTNVLPMI 124

Query: 124 LTFAWVNFFFSGFVAAKIPFPLTQRFRSMLQNGIDLSTVDVSYVSSRSWYFLNLFGLRGL 183
           L   W+N  FSGFV  K+PFPLT RF+ MLQ GI+L T+D S+VSS SWYFLN+FGLR +
Sbjct: 125 LIGGWINMTFSGFVTTKVPFPLTLRFKPMLQQGIELLTLDASWVSSASWYFLNVFGLRSI 184

Query: 184 FSLILGEENAMDDTQRMM-QMSGFGM----DPTKGLSAEKDNLDIVQHEWVLPKFEHRAE 240
           +SLILG++NA D ++ M  QM+G  M    D  K    E + L++  H+W L   E    
Sbjct: 185 YSLILGQDNAADQSRMMQEQMTGAAMAMPADTNKAFKTEWEALELTDHQWALDDVEEELM 243

[Close]

BLAST of Carg25124 vs. Swiss-Prot
Match: sp|Q99KI3|EMC3_MOUSE (ER membrane protein complex subunit 3 OS=Mus musculus OX=10090 GN=Emc3 PE=1 SV=3)

HSP 1 Score: 197.6 bits (501), Expect = 1.6e-49
Identity = 100/241 (41.49%), Postives = 153/241 (63.49%), Query Frame = 0


Query: 4   DLVLDTAIRDWVLIPLSVVMVLIGVLRYFVSKLMRSSPVPDAKVVREGQIVLRARNLRSA 63
           +L+LD+ IR WV++P+ ++   +G++R++VS L++S      + V + Q+++R+R LR  
Sbjct: 5   ELLLDSNIRLWVVLPIVIITFFVGMIRHYVSILLQSDKKLTQEQVSDSQVLIRSRVLREN 64

Query: 64  ANFIPQKSFRSRRVYYGNEENGLLFVPKGQAQNAQAQMFSDPNMAMDMMKKNLSMIIPQT 123
             +IP++SF +R+ Y+ N E+G  F  K + +       +DP M  DMMK N++ ++P  
Sbjct: 65  GKYIPKQSFLTRKYYFNNPEDG--FFKKTKRKVVPPSPMTDPTMLTDMMKGNVTNVLPMI 124

Query: 124 LTFAWVNFFFSGFVAAKIPFPLTQRFRSMLQNGIDLSTVDVSYVSSRSWYFLNLFGLRGL 183
           L   W+N  FSGFV  K+PFPLT RF+ MLQ GI+L T+D S+VSS SWYFLN+FGLR +
Sbjct: 125 LIGGWINMTFSGFVTTKVPFPLTLRFKPMLQQGIELLTLDASWVSSASWYFLNVFGLRSI 184

Query: 184 FSLILGEENAMDDTQRMM-QMSGFGM----DPTKGLSAEKDNLDIVQHEWVLPKFEHRAE 240
           +SLILG++NA D ++ M  QM+G  M    D  K    E + L++  H+W L   E    
Sbjct: 185 YSLILGQDNAADQSRMMQEQMTGAAMAMPADTNKAFKTEWEALELTDHQWALDDVEEELM 243

[Close]

BLAST of Carg25124 vs. Swiss-Prot
Match: sp|Q5R7C1|EMC3_PONAB (ER membrane protein complex subunit 3 OS=Pongo abelii OX=9601 GN=EMC3 PE=2 SV=3)

HSP 1 Score: 197.6 bits (501), Expect = 1.6e-49
Identity = 100/241 (41.49%), Postives = 153/241 (63.49%), Query Frame = 0


Query: 4   DLVLDTAIRDWVLIPLSVVMVLIGVLRYFVSKLMRSSPVPDAKVVREGQIVLRARNLRSA 63
           +L+LD+ IR WV++P+ ++   +G++R++VS L++S      + V + Q+++R+R LR  
Sbjct: 5   ELLLDSNIRLWVVLPIVIITFFVGMIRHYVSILLQSDKKLTQEQVSDSQVLIRSRVLREN 64

Query: 64  ANFIPQKSFRSRRVYYGNEENGLLFVPKGQAQNAQAQMFSDPNMAMDMMKKNLSMIIPQT 123
             +IP++SF +R+ Y+ N E+G  F  K + +       +DP M  DMMK N++ ++P  
Sbjct: 65  GKYIPKQSFLTRKYYFNNPEDG--FFKKTKRKVVPPSPMTDPTMLTDMMKGNVTNVLPMI 124

Query: 124 LTFAWVNFFFSGFVAAKIPFPLTQRFRSMLQNGIDLSTVDVSYVSSRSWYFLNLFGLRGL 183
           L   W+N  FSGFV  K+PFPLT RF+ MLQ GI+L T+D S+VSS SWYFLN+FGLR +
Sbjct: 125 LIGGWINMTFSGFVTTKVPFPLTLRFKPMLQQGIELLTLDASWVSSASWYFLNVFGLRSI 184

Query: 184 FSLILGEENAMDDTQRMM-QMSGFGM----DPTKGLSAEKDNLDIVQHEWVLPKFEHRAE 240
           +SLILG++NA D ++ M  QM+G  M    D  K    E + L++  H+W L   E    
Sbjct: 185 YSLILGQDNAADQSRMMQEQMTGAAMAMPADTNKAFKTEWEALELTDHQWALDDVEEELM 243

[Close]

BLAST of Carg25124 vs. Swiss-Prot
Match: sp|Q5U2V8|EMC3_RAT (ER membrane protein complex subunit 3 OS=Rattus norvegicus OX=10116 GN=Emc3 PE=2 SV=3)

HSP 1 Score: 197.6 bits (501), Expect = 1.6e-49
Identity = 100/241 (41.49%), Postives = 153/241 (63.49%), Query Frame = 0


Query: 4   DLVLDTAIRDWVLIPLSVVMVLIGVLRYFVSKLMRSSPVPDAKVVREGQIVLRARNLRSA 63
           +L+LD+ IR WV++P+ ++   +G++R++VS L++S      + V + Q+++R+R LR  
Sbjct: 5   ELLLDSNIRLWVVLPIVIITFFVGMIRHYVSILLQSDKKLTQEQVSDSQVLIRSRVLREN 64

Query: 64  ANFIPQKSFRSRRVYYGNEENGLLFVPKGQAQNAQAQMFSDPNMAMDMMKKNLSMIIPQT 123
             +IP++SF +R+ Y+ N E+G  F  K + +       +DP M  DMMK N++ ++P  
Sbjct: 65  GKYIPKQSFLTRKYYFNNPEDG--FFKKTKRKVVPPSPMTDPTMLTDMMKGNVTNVLPMI 124

Query: 124 LTFAWVNFFFSGFVAAKIPFPLTQRFRSMLQNGIDLSTVDVSYVSSRSWYFLNLFGLRGL 183
           L   W+N  FSGFV  K+PFPLT RF+ MLQ GI+L T+D S+VSS SWYFLN+FGLR +
Sbjct: 125 LIGGWINMTFSGFVTTKVPFPLTLRFKPMLQQGIELLTLDASWVSSASWYFLNVFGLRSI 184

Query: 184 FSLILGEENAMDDTQRMM-QMSGFGM----DPTKGLSAEKDNLDIVQHEWVLPKFEHRAE 240
           +SLILG++NA D ++ M  QM+G  M    D  K    E + L++  H+W L   E    
Sbjct: 185 YSLILGQDNAADQSRMMQEQMTGAAMAMPADTNKAFKTEWEALELTDHQWALDDVEEELM 243

[Close]

BLAST of Carg25124 vs. TrEMBL
Match: tr|A0A1S3C924|A0A1S3C924_CUCME (ER membrane protein complex subunit 3 OS=Cucumis melo OX=3656 GN=LOC103498211 PE=3 SV=1)

HSP 1 Score: 480.3 bits (1235), Expect = 2.5e-132
Identity = 244/246 (99.19%), Postives = 245/246 (99.59%), Query Frame = 0


Query: 1   MAEDLVLDTAIRDWVLIPLSVVMVLIGVLRYFVSKLMRSSPVPDAKVVREGQIVLRARNL 60
           MAEDLVLDTAIRDWVLIPLSVVMVLIGVLRYFVSKLMRSSPVPDAKVVREGQIVLRARNL
Sbjct: 1   MAEDLVLDTAIRDWVLIPLSVVMVLIGVLRYFVSKLMRSSPVPDAKVVREGQIVLRARNL 60

Query: 61  RSAANFIPQKSFRSRRVYYGNEENGLLFVPKGQAQNAQAQMFSDPNMAMDMMKKNLSMII 120
           RSAANFIP KSFRSRRVYYGNEENGLL+VPKGQAQNAQAQMFSDPNMAMDMMKKNLSMII
Sbjct: 61  RSAANFIPHKSFRSRRVYYGNEENGLLYVPKGQAQNAQAQMFSDPNMAMDMMKKNLSMII 120

Query: 121 PQTLTFAWVNFFFSGFVAAKIPFPLTQRFRSMLQNGIDLSTVDVSYVSSRSWYFLNLFGL 180
           PQTLTFAWVNFFFSGFVAAKIPFPLTQRFRSMLQNGIDLSTVDVSYVSSRSWYFLNLFGL
Sbjct: 121 PQTLTFAWVNFFFSGFVAAKIPFPLTQRFRSMLQNGIDLSTVDVSYVSSRSWYFLNLFGL 180

Query: 181 RGLFSLILGEENAMDDTQRMMQMSGFGMDPTKGLSAEKDNLDIVQHEWVLPKFEHRAEAV 240
           RGLFSLILGEENAMDDTQRMMQMSGFGMDPTKGLSAEKDNLDIVQHEWVLPKFEHRAEAV
Sbjct: 181 RGLFSLILGEENAMDDTQRMMQMSGFGMDPTKGLSAEKDNLDIVQHEWVLPKFEHRAEAV 240

Query: 241 LRKIVS 247
           LRKIVS
Sbjct: 241 LRKIVS 246

[Close]

BLAST of Carg25124 vs. TrEMBL
Match: tr|A0A067KTH6|A0A067KTH6_JATCU (ER membrane protein complex subunit 3 OS=Jatropha curcas OX=180498 GN=JCGZ_09018 PE=3 SV=1)

HSP 1 Score: 456.4 bits (1173), Expect = 3.9e-125
Identity = 227/246 (92.28%), Postives = 239/246 (97.15%), Query Frame = 0


Query: 1   MAEDLVLDTAIRDWVLIPLSVVMVLIGVLRYFVSKLMRSSPVPDAKVVREGQIVLRARNL 60
           MAEDLVLDTAIRDWVLIPLSVVMVLIGVLRYFVSKLMRS P+PDAK+V+EGQ+++RARNL
Sbjct: 1   MAEDLVLDTAIRDWVLIPLSVVMVLIGVLRYFVSKLMRSYPIPDAKIVKEGQVIVRARNL 60

Query: 61  RSAANFIPQKSFRSRRVYYGNEENGLLFVPKGQAQNAQAQMFSDPNMAMDMMKKNLSMII 120
           RS ANFIP KSFR+RRVY+ NEENGLL VPKGQAQNAQAQMFSDPNMAMDMMKKNLSMII
Sbjct: 61  RSGANFIPPKSFRARRVYFSNEENGLLHVPKGQAQNAQAQMFSDPNMAMDMMKKNLSMII 120

Query: 121 PQTLTFAWVNFFFSGFVAAKIPFPLTQRFRSMLQNGIDLSTVDVSYVSSRSWYFLNLFGL 180
           PQTLTFAWVNFFFSGFVAAKIPFPLTQRFRSMLQNGIDLSTVDVSYVSSRSWYFLNLFGL
Sbjct: 121 PQTLTFAWVNFFFSGFVAAKIPFPLTQRFRSMLQNGIDLSTVDVSYVSSRSWYFLNLFGL 180

Query: 181 RGLFSLILGEENAMDDTQRMMQMSGFGMDPTKGLSAEKDNLDIVQHEWVLPKFEHRAEAV 240
           RGLFSLILGEENA+DDTQRMMQMSGFG+DPTK LSAEKD+LDIVQHEW LPKFEHRAEAV
Sbjct: 181 RGLFSLILGEENAVDDTQRMMQMSGFGLDPTKSLSAEKDSLDIVQHEWALPKFEHRAEAV 240

Query: 241 LRKIVS 247
           LRK+VS
Sbjct: 241 LRKLVS 246

[Close]

BLAST of Carg25124 vs. TrEMBL
Match: tr|A0A067K3W2|A0A067K3W2_JATCU (ER membrane protein complex subunit 3 OS=Jatropha curcas OX=180498 GN=JCGZ_22252 PE=3 SV=1)

HSP 1 Score: 454.9 bits (1169), Expect = 1.1e-124
Identity = 227/246 (92.28%), Postives = 238/246 (96.75%), Query Frame = 0


Query: 1   MAEDLVLDTAIRDWVLIPLSVVMVLIGVLRYFVSKLMRSSPVPDAKVVREGQIVLRARNL 60
           MAEDLVLDTAIRDWVLIPLSVVMVLIGVLRYFVSKLMRS  VPDAK+V+EGQ+++RARNL
Sbjct: 1   MAEDLVLDTAIRDWVLIPLSVVMVLIGVLRYFVSKLMRSYQVPDAKIVKEGQVIIRARNL 60

Query: 61  RSAANFIPQKSFRSRRVYYGNEENGLLFVPKGQAQNAQAQMFSDPNMAMDMMKKNLSMII 120
           RS ANFIP KSFR+RRVY+ NEENGLLFVPKGQAQNAQAQMFSDPNMAMDMMKKNLSMII
Sbjct: 61  RSGANFIPPKSFRARRVYFSNEENGLLFVPKGQAQNAQAQMFSDPNMAMDMMKKNLSMII 120

Query: 121 PQTLTFAWVNFFFSGFVAAKIPFPLTQRFRSMLQNGIDLSTVDVSYVSSRSWYFLNLFGL 180
           PQTLTFAWVNFFFSGFVAAKIPFPLTQRFRSMLQNGIDLSTVDVSYVSSRSWYFLNLFGL
Sbjct: 121 PQTLTFAWVNFFFSGFVAAKIPFPLTQRFRSMLQNGIDLSTVDVSYVSSRSWYFLNLFGL 180

Query: 181 RGLFSLILGEENAMDDTQRMMQMSGFGMDPTKGLSAEKDNLDIVQHEWVLPKFEHRAEAV 240
           RGLFSLILGEENAMDDTQRMMQMSGFG DPTK LSAEKD+LDIVQHEW LP+FEHRAEAV
Sbjct: 181 RGLFSLILGEENAMDDTQRMMQMSGFGFDPTKSLSAEKDSLDIVQHEWALPQFEHRAEAV 240

Query: 241 LRKIVS 247
           LRK+V+
Sbjct: 241 LRKLVN 246

[Close]

BLAST of Carg25124 vs. TrEMBL
Match: tr|A0A1U8LSI1|A0A1U8LSI1_GOSHI (ER membrane protein complex subunit 3 OS=Gossypium hirsutum OX=3635 GN=LOC107930393 PE=3 SV=1)

HSP 1 Score: 451.4 bits (1160), Expect = 1.3e-123
Identity = 225/246 (91.46%), Postives = 235/246 (95.53%), Query Frame = 0


Query: 1   MAEDLVLDTAIRDWVLIPLSVVMVLIGVLRYFVSKLMRSSPVPDAKVVREGQIVLRARNL 60
           MAEDLVLDTAIRDWVLIPLSVVMVLIG+LRYFVSKLMRS  VPD K+V+EGQ+++RARNL
Sbjct: 1   MAEDLVLDTAIRDWVLIPLSVVMVLIGILRYFVSKLMRSFQVPDPKIVKEGQVIVRARNL 60

Query: 61  RSAANFIPQKSFRSRRVYYGNEENGLLFVPKGQAQNAQAQMFSDPNMAMDMMKKNLSMII 120
           R AANFIP KSFRSRRVY+ NEENGLLFVPKGQAQNAQAQMFSDPNMAMDMMKKNLSMII
Sbjct: 61  RGAANFIPPKSFRSRRVYFSNEENGLLFVPKGQAQNAQAQMFSDPNMAMDMMKKNLSMII 120

Query: 121 PQTLTFAWVNFFFSGFVAAKIPFPLTQRFRSMLQNGIDLSTVDVSYVSSRSWYFLNLFGL 180
           PQTLTFAWVNFFFSGFVAAKIPFPLTQRFRSMLQNGIDLSTVDVSYVSSRSWYFLNLFGL
Sbjct: 121 PQTLTFAWVNFFFSGFVAAKIPFPLTQRFRSMLQNGIDLSTVDVSYVSSRSWYFLNLFGL 180

Query: 181 RGLFSLILGEENAMDDTQRMMQMSGFGMDPTKGLSAEKDNLDIVQHEWVLPKFEHRAEAV 240
           RGLFSLILGEENAMDDTQRMMQM GFG DP+K LSAEKD LDIVQHEW LPKFEHRAEAV
Sbjct: 181 RGLFSLILGEENAMDDTQRMMQMGGFGFDPSKSLSAEKDGLDIVQHEWALPKFEHRAEAV 240

Query: 241 LRKIVS 247
           L+K+VS
Sbjct: 241 LKKLVS 246

[Close]

BLAST of Carg25124 vs. TrEMBL
Match: tr|A0A0D2UMF6|A0A0D2UMF6_GOSRA (ER membrane protein complex subunit 3 OS=Gossypium raimondii OX=29730 GN=B456_011G009600 PE=3 SV=1)

HSP 1 Score: 451.4 bits (1160), Expect = 1.3e-123
Identity = 225/246 (91.46%), Postives = 235/246 (95.53%), Query Frame = 0


Query: 1   MAEDLVLDTAIRDWVLIPLSVVMVLIGVLRYFVSKLMRSSPVPDAKVVREGQIVLRARNL 60
           MAEDLVLDTAIRDWVLIPLSVVMVLIG+LRYFVSKLMRS  VPD K+V+EGQ+++RARNL
Sbjct: 1   MAEDLVLDTAIRDWVLIPLSVVMVLIGILRYFVSKLMRSFQVPDPKIVKEGQVIVRARNL 60

Query: 61  RSAANFIPQKSFRSRRVYYGNEENGLLFVPKGQAQNAQAQMFSDPNMAMDMMKKNLSMII 120
           R AANFIP KSFRSRRVY+ NEENGLLFVPKGQAQNAQAQMFSDPNMAMDMMKKNLSMII
Sbjct: 61  RGAANFIPPKSFRSRRVYFSNEENGLLFVPKGQAQNAQAQMFSDPNMAMDMMKKNLSMII 120

Query: 121 PQTLTFAWVNFFFSGFVAAKIPFPLTQRFRSMLQNGIDLSTVDVSYVSSRSWYFLNLFGL 180
           PQTLTFAWVNFFFSGFVAAKIPFPLTQRFRSMLQNGIDLSTVDVSYVSSRSWYFLNLFGL
Sbjct: 121 PQTLTFAWVNFFFSGFVAAKIPFPLTQRFRSMLQNGIDLSTVDVSYVSSRSWYFLNLFGL 180

Query: 181 RGLFSLILGEENAMDDTQRMMQMSGFGMDPTKGLSAEKDNLDIVQHEWVLPKFEHRAEAV 240
           RGLFSLILGEENAMDDTQRMMQM GFG DP+K LSAEKD LDIVQHEW LPKFEHRAEAV
Sbjct: 181 RGLFSLILGEENAMDDTQRMMQMGGFGFDPSKSLSAEKDGLDIVQHEWALPKFEHRAEAV 240

Query: 241 LRKIVS 247
           L+K+VS
Sbjct: 241 LKKLVS 246

The following BLAST results are available for this feature:

BLAST of Carg25124 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_023001598.1	4.5e-133	100.00	ER membrane protein complex subunit 3 [Cucurbita maxima] >XP_023519748.1 ER memb...	[more]
XP_022927570.1	5.9e-133	99.59	ER membrane protein complex subunit 3 [Cucurbita moschata]	[more]
XP_008458952.1	3.8e-132	99.19	PREDICTED: ER membrane protein complex subunit 3 [Cucumis melo]	[more]
XP_004139548.1	5.0e-132	98.78	PREDICTED: ER membrane protein complex subunit 3 [Cucumis sativus]	[more]
XP_022142524.1	1.2e-130	97.97	ER membrane protein complex subunit 3 [Momordica charantia]	[more]

BLAST of Carg25124 vs. TAIR10


Match Name	E-value	Identity	Description
AT4G12590.1	5.4e-120	86.12	Protein of unknown function DUF106, transmembrane	[more]

BLAST of Carg25124 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|Q7SXW4\|EMC3_DANRE	4.3e-50	43.33	ER membrane protein complex subunit 3 OS=Danio rerio OX=7955 GN=emc3 PE=2 SV=1	[more]
sp\|Q9P0I2\|EMC3_HUMAN	1.6e-49	41.49	ER membrane protein complex subunit 3 OS=Homo sapiens OX=9606 GN=EMC3 PE=1 SV=3	[more]
sp\|Q99KI3\|EMC3_MOUSE	1.6e-49	41.49	ER membrane protein complex subunit 3 OS=Mus musculus OX=10090 GN=Emc3 PE=1 SV=3	[more]
sp\|Q5R7C1\|EMC3_PONAB	1.6e-49	41.49	ER membrane protein complex subunit 3 OS=Pongo abelii OX=9601 GN=EMC3 PE=2 SV=3	[more]
sp\|Q5U2V8\|EMC3_RAT	1.6e-49	41.49	ER membrane protein complex subunit 3 OS=Rattus norvegicus OX=10116 GN=Emc3 PE=2...	[more]

BLAST of Carg25124 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A1S3C924\|A0A1S3C924_CUCME	2.5e-132	99.19	ER membrane protein complex subunit 3 OS=Cucumis melo OX=3656 GN=LOC103498211 PE...	[more]
tr\|A0A067KTH6\|A0A067KTH6_JATCU	3.9e-125	92.28	ER membrane protein complex subunit 3 OS=Jatropha curcas OX=180498 GN=JCGZ_09018...	[more]
tr\|A0A067K3W2\|A0A067K3W2_JATCU	1.1e-124	92.28	ER membrane protein complex subunit 3 OS=Jatropha curcas OX=180498 GN=JCGZ_22252...	[more]
tr\|A0A1U8LSI1\|A0A1U8LSI1_GOSHI	1.3e-123	91.46	ER membrane protein complex subunit 3 OS=Gossypium hirsutum OX=3635 GN=LOC107930...	[more]
tr\|A0A0D2UMF6\|A0A0D2UMF6_GOSRA	1.3e-123	91.46	ER membrane protein complex subunit 3 OS=Gossypium raimondii OX=29730 GN=B456_01...	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Cellular Component**
Term	Definition
GO:0016020	membrane

Vocabulary: **INTERPRO**
Term	Definition
IPR008568	EMC3
IPR002809	EMC3/TMCO1

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0016020	membrane
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg25124-RA	Carg25124-RA	mRNA

InterPro

Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002809	Integral membrane protein EMC3/TMCO1-like	SMART	SM01415	DUF106_2	coord: 4..192 e-value: 9.2E-81 score: 284.3
IPR002809	Integral membrane protein EMC3/TMCO1-like	PFAM	PF01956	DUF106	coord: 4..192 e-value: 2.9E-52 score: 176.7
IPR008568	ER membrane protein complex subunit 3	PIRSF	PIRSF010045	TMP_111	coord: 1..244 e-value: 1.5E-85 score: 284.9
IPR008568	ER membrane protein complex subunit 3	PANTHER	PTHR13116	UNCHARACTERIZED	coord: 1..241
None	No IPR available	PANTHER	PTHR13116:SF5	ER MEMBRANE PROTEIN COMPLEX 3	coord: 1..241

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Carg25124	CmaCh13G003960	Cucurbita maxima (Rimu)	carcmaB1435
Carg25124	CmoCh13G004210	Cucurbita moschata (Rifu)	carcmoB1390
Carg25124	Lsi02G011010	Bottle gourd (USVL1VR-Ls)	carlsiB948
Carg25124	Cp4.1LG20g06470	Cucurbita pepo (Zucchini)	carcpeB1444

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Carg25124	Cucumber (Gy14) v2	carcgybB1020
Carg25124	Cucurbita moschata (Rifu)	carcmoB1391
Carg25124	Wild cucumber (PI 183967)	carcpiB1073
Carg25124	Cucumber (Chinese Long) v2	carcuB1051
Carg25124	Cucumber (Chinese Long) v3	carcucB1083
Carg25124	Bottle gourd (USVL1VR-Ls)	carlsiB949
Carg25124	Watermelon (Charleston Gray)	carwcgB1012
Carg25124	Watermelon (97103) v1	carwmB1040
Carg25124	Watermelon (97103) v2	carwmbB1098
Carg25124	Wax gourd	carwgoB1216
Carg25124	Wax gourd	carwgoB1218