Carg25097 (gene) Silver-seed gourd

Overview
NameCarg25097
Typegene
OrganismCucurbita argyrosperma (Silver-seed gourd)
DescriptionRemorin
LocationCucurbita_argyrosperma_scaffold_072 : 390494 .. 392807 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ATATCATATCATTCTTCTAAATCTAACAACCCTCCCCTCATCTCTCTCTCTCTTGTCTCCTTATATTTGGAAACTCATCCTCATATCTCTCAGATTCCCACTCTCCAATCCCCCATGGCTGACCAATCAACCCCGCCCTCCGATCCCCCGCCGCCACCGCCGCAGGAGCTCCCCAAAGACGTCGCTGAAGAGAAAACCGTAATTCCGCCACCGCCCCCATCGGCACCGGTACCTGCGCCCACACCTGCTGAACACAAAACCGATGACTCCAAAGCTCTTGTTCTTGTTGAAAGTAAATAATTATACCTCAAACCCCTTTTTTCCTCTCTATTTCTCTGTGTGTGTGTTTTTTTTTTTTTTTTAAATTCTATTATTATTATTATTTTTCATCTCAGAGTTTATTTTGTTTATGCTCTGTTTGTTGGGGGAATATATATATATATATATATATATATATCTTTGATTCTGATTCTCTTGTTTGGGGATTCGATTCAATTTTTATTCTCTGTGTGCCCTCGATTGGGAAAGTGGAATTTTTGTTTTTTGTTTTTGTTTCTTTTACTCTGTTTGGGTGACAGAGAAAATATTAGTGATATTAGGAATCACGACTCTCTACAATTATATGATATTGTCCGCTCTAACCCATGATCATTTTCTTCCAACAATCCTCTCTTCGAACAAATTATACTATAGAGACTCTCCTAAGGCCTATAGAACAAAGGAGTCCTTGAACAAAGTACACATTTTTGTTCGAGGCTGAATCATTTTTAACTATATCTTCTAGGCTCAAAATTTTTTTTGTTCAGATTCTATTGACATGACTAAGTTAAAGGCATGACCCTGAAACTATGTTAGGAATCACAAATCTATACAACAGTATGATATTGTTTCTTTAAGCATAAGCTCTCGTGGGTTTGATTCGGGCTTCCCGAACAGTCTCGCTCCCTCCCAACCATACGAAAAAGAATTAATGATATGTTGTTGTTATTGCAGAGGTTCCAGAAGCGGGTGAGGCAAAAAGCAGCGAGGGGTCTGTAAACAGAGGTATTCATTACATAAAACCCTGTTTTGAATGACTATTTTGGTTCCTTAAAAGAGTGAGTTTGTATATGATTTTTGTTCAGATGCTGTGCTAGCCAAAGTTGCAACAGAGAAGAGGGTGTCGCTCATAAAAGCTTGGGAAGAAAGTGAAAAGTCAAAGGCAGAGAATAAGTAAGATTCATTCCTTTTTCTATCTATTTGACCTTTTATTACCAACATAATATTTGATCATTTATTATAGACATTTACTCAGCTTATGTATCATATTTATCTTTTTATTTTATAACTATTTATTGTTCTTTCCTTGGTATTTTATTTGATTCTCTAAATGATTATAAATGGAGACCGAAGCTAAACTGAGCTCGTTTTGCAGAGCTCACAAAAAGCTTTCTTCGGTTGTGGCTTGGGAGAATAGCAGAAAGGCTTCTGTAGAGGCTGAGTTGAAGAGGATTGAGGTATCAAAACATTCTATTTACACGAACTAATTTAGTTCATTTTGCTTAAGACTTCATCTCTAAAAGCTTAGTAGAAATATATATATATATATATATTAAAAATGAGAAAGAGAGGTGGGACAGAGAGTCCCACCTTTATCAATGTTTATAATATTTAGATAGGATACCAGCTATCTACTAATTCCAATCTTTACCTTTAAACGGAATAGAAGCTACCAACTAACTCTTAAACAAAGAGAAAATATACCAAATATATTAACCAAATCTTGAAGATAAAAGATAAAATATATATGTATTTTTTTTTTTGGAGTGGTTTTATGTTAAAAGAGTAATTAAACAAAATTTTGAGCAGGAAAATTTGGAGAAGAAGAAGGCAGAGTACATAGAGAAAATGAAGAACAAAATTGCTCTGCTTCACAAAGAAGCAGAGGAGAAGAGGGCGATAATCGAAGCCAAGCGTGGAGAAGAGCTTCTCAAGGCAGAGGAGACGGCTGCAAAGTACCGTGCTACCGGTACTGCCCCAAAGAAGCTTCTCAGCTGCTTCTCGAGCTGAGCGACTCATCAGTTCATGTTCGTGTTCGTGTTCATGTCATTTGGGTGTTACTTTAGATGTGTTGCTGTTTATGGCTTGATTTGTTGGTGTGCTTAGTGAAGATTTGATAAGTGCTTGTGAATATGATATTTGGAGGAACATTTGTTTGAATGTAAATCAATATTGTTATAGTCATTCTAATTTATTGCAACTCAATCAGATCTGAAATTAATTTGTTGATATTTTATTTTATTTTATTATTTAAAAAAAAAACCATTTTCAAATT

mRNA sequence

ATATCATATCATTCTTCTAAATCTAACAACCCTCCCCTCATCTCTCTCTCTCTTGTCTCCTTATATTTGGAAACTCATCCTCATATCTCTCAGATTCCCACTCTCCAATCCCCCATGGCTGACCAATCAACCCCGCCCTCCGATCCCCCGCCGCCACCGCCGCAGGAGCTCCCCAAAGACGTCGCTGAAGAGAAAACCGTAATTCCGCCACCGCCCCCATCGGCACCGGTACCTGCGCCCACACCTGCTGAACACAAAACCGATGACTCCAAAGCTCTTGTTCTTGTTGAAAAGGTTCCAGAAGCGGGTGAGGCAAAAAGCAGCGAGGGGTCTGTAAACAGAGATGCTGTGCTAGCCAAAGTTGCAACAGAGAAGAGGGTGTCGCTCATAAAAGCTTGGGAAGAAAGTGAAAAGTCAAAGGCAGAGAATAAAGCTCACAAAAAGCTTTCTTCGGTTGTGGCTTGGGAGAATAGCAGAAAGGCTTCTGTAGAGGCTGAGTTGAAGAGGATTGAGGAAAATTTGGAGAAGAAGAAGGCAGAGTACATAGAGAAAATGAAGAACAAAATTGCTCTGCTTCACAAAGAAGCAGAGGAGAAGAGGGCGATAATCGAAGCCAAGCGTGGAGAAGAGCTTCTCAAGGCAGAGGAGACGGCTGCAAAGTACCGTGCTACCGGTACTGCCCCAAAGAAGCTTCTCAGCTGCTTCTCGAGCTGAGCGACTCATCAGTTCATGTTCGTGTTCGTGTTCATGTCATTTGGGTGTTACTTTAGATGTGTTGCTGTTTATGGCTTGATTTGTTGGTGTGCTTAGTGAAGATTTGATAAGTGCTTGTGAATATGATATTTGGAGGAACATTTGTTTGAATGTAAATCAATATTGTTATAGTCATTCTAATTTATTGCAACTCAATCAGATCTGAAATTAATTTGTTGATATTTTATTTTATTTTATTATTTAAAAAAAAAACCATTTTCAAATT

Coding sequence (CDS)

ATGGCTGACCAATCAACCCCGCCCTCCGATCCCCCGCCGCCACCGCCGCAGGAGCTCCCCAAAGACGTCGCTGAAGAGAAAACCGTAATTCCGCCACCGCCCCCATCGGCACCGGTACCTGCGCCCACACCTGCTGAACACAAAACCGATGACTCCAAAGCTCTTGTTCTTGTTGAAAAGGTTCCAGAAGCGGGTGAGGCAAAAAGCAGCGAGGGGTCTGTAAACAGAGATGCTGTGCTAGCCAAAGTTGCAACAGAGAAGAGGGTGTCGCTCATAAAAGCTTGGGAAGAAAGTGAAAAGTCAAAGGCAGAGAATAAAGCTCACAAAAAGCTTTCTTCGGTTGTGGCTTGGGAGAATAGCAGAAAGGCTTCTGTAGAGGCTGAGTTGAAGAGGATTGAGGAAAATTTGGAGAAGAAGAAGGCAGAGTACATAGAGAAAATGAAGAACAAAATTGCTCTGCTTCACAAAGAAGCAGAGGAGAAGAGGGCGATAATCGAAGCCAAGCGTGGAGAAGAGCTTCTCAAGGCAGAGGAGACGGCTGCAAAGTACCGTGCTACCGGTACTGCCCCAAAGAAGCTTCTCAGCTGCTTCTCGAGCTGA

Protein sequence

MADQSTPPSDPPPPPPQELPKDVAEEKTVIPPPPPSAPVPAPTPAEHKTDDSKALVLVEKVPEAGEAKSSEGSVNRDAVLAKVATEKRVSLIKAWEESEKSKAENKAHKKLSSVVAWENSRKASVEAELKRIEENLEKKKAEYIEKMKNKIALLHKEAEEKRAIIEAKRGEELLKAEETAAKYRATGTAPKKLLSCFSS
Homology
[Close]
BLAST of Carg25097 vs. NCBI nr
Match: XP_022952053.1 (remorin-like [Cucurbita moschata])

HSP 1 Score: 235.7 bits (600), Expect = 1.3e-58
Identity = 159/162 (98.15%), Postives = 159/162 (98.15%), Query Frame = 0 

Query: 38  PVPAPTPAEHKTDDSKALVLVEKVPEAGEAKSSEGSVNRDAVLAKVATEKRVSLIKAWEE 97
           PVPAPTPAEHKTDDSKALVLVEKVPEAGEAKSSEGSVNRDAVLAKVATEKRVSLIKAWEE
Sbjct: 38  PVPAPTPAEHKTDDSKALVLVEKVPEAGEAKSSEGSVNRDAVLAKVATEKRVSLIKAWEE 97

Query: 98  SEKSKAENXXXXXXXXXXXXXXXXXXXXXXXXKRIEENLEKKKAEYIEKMKNKIALLHKE 157
           SEKSKAENXXXXXXXXXXXXXXXXXXXXXXXX   EENLEKKKAEYIEKMKNKIALLHKE
Sbjct: 98  SEKSKAENXXXXXXXXXXXXXXXXXXXXXXXXXXXEENLEKKKAEYIEKMKNKIALLHKE 157

Query: 158 AEEKRAIIEAKRGEELLKAEETAAKYRATGTAPKKLLSCFSS 200
           AEEKRAIIEAKRGEELLKAEETAAKYRATGTAPKKLLSCFSS
Sbjct: 158 AEEKRAIIEAKRGEELLKAEETAAKYRATGTAPKKLLSCFSS 199

[Close]
BLAST of Carg25097 vs. NCBI nr
Match: XP_022971850.1 (remorin-like [Cucurbita maxima])

HSP 1 Score: 231.9 bits (590), Expect = 1.9e-57
Identity = 156/161 (96.89%), Postives = 156/161 (96.89%), Query Frame = 0 

Query: 39  VPAPTPAEHKTDDSKALVLVEKVPEAGEAKSSEGSVNRDAVLAKVATEKRVSLIKAWEES 98
           VPAPTPAEHKTDDSKALVLVEK PEAGEAKSSEGSVNRDAVLAKVATEKRVSLIKAWEES
Sbjct: 36  VPAPTPAEHKTDDSKALVLVEKAPEAGEAKSSEGSVNRDAVLAKVATEKRVSLIKAWEES 95

Query: 99  EKSKAENXXXXXXXXXXXXXXXXXXXXXXXXKRIEENLEKKKAEYIEKMKNKIALLHKEA 158
           EKSKAEN XXXXXXXXXXXXXXXXXXXXXXX   EENLEKKKAEYIEKMKNKIALLHKEA
Sbjct: 96  EKSKAENKXXXXXXXXXXXXXXXXXXXXXXXXXXEENLEKKKAEYIEKMKNKIALLHKEA 155

Query: 159 EEKRAIIEAKRGEELLKAEETAAKYRATGTAPKKLLSCFSS 200
           EEKRAIIEAKRGEELLKAEETAAKYRATGTAPKKLLSCFSS
Sbjct: 156 EEKRAIIEAKRGEELLKAEETAAKYRATGTAPKKLLSCFSS 196

[Close]
BLAST of Carg25097 vs. NCBI nr
Match: XP_011076174.1 (remorin-like isoform X1 [Sesamum indicum])

HSP 1 Score: 184.1 bits (466), Expect = 4.6e-43
Identity = 127/159 (79.87%), Postives = 140/159 (88.05%), Query Frame = 0 

Query: 39  VPAPTPAEHKTDDSKALVLVEKVPEAGEAKSSEGSVNRDAVLAKVATEKRVSLIKAWEES 98
           +P P P E K ++ KAL +VEK PEA E K  EGS+NRDAVLA+VATEKR+SLIKAWEES
Sbjct: 38  IPLP-PTEEKAEECKALAVVEKEPEAAEEKKPEGSINRDAVLARVATEKRLSLIKAWEES 97

Query: 99  EKSKAENXXXXXXXXXXXXXXXXXXXXXXXXKRIEENLEKKKAEYIEKMKNKIALLHKEA 158
           EKSKAEN XXXXXXXXXXXXXXXXXXXXXX K+IEE LEKKKA+YIE MKN++AL+HK A
Sbjct: 98  EKSKAENKXXXXXXXXXXXXXXXXXXXXXXLKKIEEQLEKKKAKYIETMKNRVALIHKAA 157

Query: 159 EEKRAIIEAKRGEELLKAEETAAKYRATGTAPKKLLSCF 198
           EEKRAIIEAKRGE+LLKAEE AAKYRATGTAPKKLL CF
Sbjct: 158 EEKRAIIEAKRGEDLLKAEEIAAKYRATGTAPKKLLGCF 195

[Close]
BLAST of Carg25097 vs. NCBI nr
Match: XP_020549033.1 (remorin-like isoform X2 [Sesamum indicum])

HSP 1 Score: 180.3 bits (456), Expect = 6.6e-42
Identity = 127/159 (79.87%), Postives = 140/159 (88.05%), Query Frame = 0 

Query: 39  VPAPTPAEHKTDDSKALVLVEKVPEAGEAKSSEGSVNRDAVLAKVATEKRVSLIKAWEES 98
           +P P P E K ++ KAL +VEK PEA E K  EGS+NRDAVLA+VATEKR+SLIKAWEES
Sbjct: 38  IPLP-PTEEKAEECKALAVVEK-PEAAEEKKPEGSINRDAVLARVATEKRLSLIKAWEES 97

Query: 99  EKSKAENXXXXXXXXXXXXXXXXXXXXXXXXKRIEENLEKKKAEYIEKMKNKIALLHKEA 158
           EKSKAEN XXXXXXXXXXXXXXXXXXXXXX K+IEE LEKKKA+YIE MKN++AL+HK A
Sbjct: 98  EKSKAENKXXXXXXXXXXXXXXXXXXXXXXLKKIEEQLEKKKAKYIETMKNRVALIHKAA 157

Query: 159 EEKRAIIEAKRGEELLKAEETAAKYRATGTAPKKLLSCF 198
           EEKRAIIEAKRGE+LLKAEE AAKYRATGTAPKKLL CF
Sbjct: 158 EEKRAIIEAKRGEDLLKAEEIAAKYRATGTAPKKLLGCF 194

[Close]
BLAST of Carg25097 vs. NCBI nr
Match: XP_021671668.1 (remorin-like [Hevea brasiliensis] >XP_021671669.1 remorin-like [Hevea brasiliensis])

HSP 1 Score: 180.3 bits (456), Expect = 6.6e-42
Identity = 125/146 (85.62%), Postives = 137/146 (93.84%), Query Frame = 0 

Query: 52  SKALVLVEKVPEAGEAKSSEGSVNRDAVLAKVATEKRVSLIKAWEESEKSKAENXXXXXX 111
           S+ALV VEK PE+ EAKS+EGSVNRDAVLA+V TEKR+SLIKAWEESEKSKAENXXXXXX
Sbjct: 51  SQALVAVEKAPESAEAKSTEGSVNRDAVLARVETEKRMSLIKAWEESEKSKAENXXXXXX 110

Query: 112 XXXXXXXXXXXXXXXXXXKRIEENLEKKKAEYIEKMKNKIALLHKEAEEKRAIIEAKRGE 171
           XXXXXXXXXXXXXXXXX K+IEE LEKKKA+Y+EKMKNKIAL+HK A+EKRA+IEAKRGE
Sbjct: 111 XXXXXXXXXXXXXXXXXLKQIEEKLEKKKADYVEKMKNKIALIHKAADEKRAMIEAKRGE 170

Query: 172 ELLKAEETAAKYRATGTAPKKLLSCF 198
           +LLKAEE AAKYRATGTAPKKLL CF
Sbjct: 171 DLLKAEEIAAKYRATGTAPKKLLGCF 196

[Close]
BLAST of Carg25097 vs. TAIR10
Match: AT3G48940.1 (Remorin family protein)

HSP 1 Score: 66.6 bits (161), Expect = 1.9e-11
Identity = 73/126 (57.94%), Postives = 81/126 (64.29%), Query Frame = 0 

Query: 72  GSVNRDAVLAKVATEKRVSLIKAWEESEKSKAENXXXXXXXXXXXXXXXXXXXXXXXXKR 131
           GSV+RDAVL ++  +KR+SLIKAWEE+EKSK ENXXXXXXXXXXXXXXXXXXXXXXXX  
Sbjct: 50  GSVHRDAVLVRLEQDKRISLIKAWEEAEKSKVENXXXXXXXXXXXXXXXXXXXXXXXXXX 109

Query: 132 IEENLEKKKAEYIEKMKNKIALLHKEAEEKRAIIEAKRGEELLKAEETAAKYRATGTAPK 191
                                             EAKRGE++LKAEE AAKYRATGTAP 
Sbjct: 110 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEAKRGEDVLKAEEMAAKYRATGTAPT 169

Query: 192 KLLSCF 198
           KL   F
Sbjct: 170 KLFGFF 175

[Close]
BLAST of Carg25097 vs. TAIR10
Match: AT5G23750.1 (Remorin family protein)

HSP 1 Score: 61.2 bits (147), Expect = 8.2e-10
Identity = 77/149 (51.68%), Postives = 83/149 (55.70%), Query Frame = 0 

Query: 48  KTDDSKALVLVEKVPEAGEAKSSEGSVNRDAVLAKVATEKRVSLIKAWEESEKSKAENXX 107
           K +DSKA+V V  VP+       EGSVNRDAVLA+V TEKR+SLIKAWEE+EK K EN X
Sbjct: 55  KQEDSKAIVPV--VPKEVXXXKKEGSVNRDAVLARVETEKRMSLIKAWEEAEKCKVENKX 114

Query: 108 XXXXXXXXXXXXXXXXXXXXXXKRIEENLEKKKAEYIEKMKNKIALLHKEAEEKRAIIEA 167
           XXXXXXXXXXXXXXXXXXXXXX                                      
Sbjct: 115 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 174

Query: 168 KRGEELLKAEETAAKYRATGTAPKKLLSC 197
                     E AAKYRATGTAPKKL  C
Sbjct: 175 XXXXXXXXXXELAAKYRATGTAPKKLFGC 201

[Close]
BLAST of Carg25097 vs. TAIR10
Match: AT2G45820.1 (Remorin family protein)

HSP 1 Score: 54.7 bits (130), Expect = 7.6e-08
Identity = 36/76 (47.37%), Postives = 44/76 (57.89%), Query Frame = 0 

Query: 38  PVPAPTPAEHKTDD----------SKALVLVEK-VPEAGEAKSSEGSVNRDAVLAKVATE 97
           P   PTPA  +  D          SKAL +VEK + E    K+S GS +RD +LA +  E
Sbjct: 20  PAKEPTPAPVEVADEKIHNPPPVESKALAVVEKPIEEHTPKKASSGSADRDVILADLEKE 79

Query: 98  KRVSLIKAWEESEKSK 103
           K+ S IKAWEESEKSK
Sbjct: 80  KKTSFIKAWEESEKSK 95

[Close]
BLAST of Carg25097 vs. TAIR10
Match: AT3G61260.1 (Remorin family protein)

HSP 1 Score: 54.7 bits (130), Expect = 7.6e-08
Identity = 74/155 (47.74%), Postives = 84/155 (54.19%), Query Frame = 0 

Query: 44  PAEHKTDDSKALVLVEK-VPEAGEAKSSEGSVNRDAVLAKVATEKRVSLIKAWEESEKSK 103
           P E   DDSKAL +VEK V E   AK +  S++RD  LA ++ EKR+S ++AWEESEKS 
Sbjct: 58  PPEQIFDDSKALTVVEKPVEEPAPAKPASASLDRDVKLADLSKEKRLSFVRAWEESEKSX 117

Query: 104 AENXXXXXXXXXXXXXXXXXXXXXXXXKRIEENLEKKKAEYIEKMKNKIALLHKEAEEKR 163
              XXXXXXXXXXXXXXXXXXXXXXXX                                 
Sbjct: 118 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 177

Query: 164 AIIEAKRGEELLKAEETAAKYRATGTAPKKLLSCF 198
                     +LKAEETAAKYRATG  PK    CF
Sbjct: 178 XXXXXXXXXXVLKAEETAAKYRATGIVPKATCGCF 212

[Close]
BLAST of Carg25097 vs. Swiss-Prot
Match: sp|P93788|REMO_SOLTU (Remorin OS=Solanum tuberosum OX=4113 PE=1 SV=1)

HSP 1 Score: 68.6 bits (166), Expect = 9.2e-11
Identity = 76/126 (60.32%), Postives = 81/126 (64.29%), Query Frame = 0 

Query: 72  GSVNRDAVLAKVATEKRVSLIKAWEESEKSKAENXXXXXXXXXXXXXXXXXXXXXXXXKR 131
           GS++RDAVLA+VATEKRVSLIKAWEESEKSK   XXXXXXXXXXXXXXXXXXXXXXXX  
Sbjct: 73  GSIDRDAVLARVATEKRVSLIKAWEESEKSKXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 132

Query: 132 IEENLEKKKAEYIEKMKNKIALLHKEAEEKRAIIEAKRGEELLKAEETAAKYRATGTAPK 191
                                                RGE+LLKAEE AAKYRATGTAPK
Sbjct: 133 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRGEDLLKAEELAAKYRATGTAPK 192

Query: 192 KLLSCF 198
           K+L  F
Sbjct: 193 KILGIF 198

[Close]
BLAST of Carg25097 vs. Swiss-Prot
Match: sp|O80837|REMO_ARATH (Remorin OS=Arabidopsis thaliana OX=3702 GN=DBP PE=1 SV=1)

HSP 1 Score: 54.7 bits (130), Expect = 1.4e-06
Identity = 36/76 (47.37%), Postives = 44/76 (57.89%), Query Frame = 0 

Query: 38  PVPAPTPAEHKTDD----------SKALVLVEK-VPEAGEAKSSEGSVNRDAVLAKVATE 97
           P   PTPA  +  D          SKAL +VEK + E    K+S GS +RD +LA +  E
Sbjct: 20  PAKEPTPAPVEVADEKIHNPPPVESKALAVVEKPIEEHTPKKASSGSADRDVILADLEKE 79

Query: 98  KRVSLIKAWEESEKSK 103
           K+ S IKAWEESEKSK
Sbjct: 80  KKTSFIKAWEESEKSK 95

[Close]
BLAST of Carg25097 vs. Swiss-Prot
Match: sp|Q9M2D8|Y3126_ARATH (Uncharacterized protein At3g61260 OS=Arabidopsis thaliana OX=3702 GN=At3g61260 PE=1 SV=1)

HSP 1 Score: 54.7 bits (130), Expect = 1.4e-06
Identity = 74/155 (47.74%), Postives = 84/155 (54.19%), Query Frame = 0 

Query: 44  PAEHKTDDSKALVLVEK-VPEAGEAKSSEGSVNRDAVLAKVATEKRVSLIKAWEESEKSK 103
           P E   DDSKAL +VEK V E   AK +  S++RD  LA ++ EKR+S ++AWEESEKS 
Sbjct: 58  PPEQIFDDSKALTVVEKPVEEPAPAKPASASLDRDVKLADLSKEKRLSFVRAWEESEKSX 117

Query: 104 AENXXXXXXXXXXXXXXXXXXXXXXXXKRIEENLEKKKAEYIEKMKNKIALLHKEAEEKR 163
              XXXXXXXXXXXXXXXXXXXXXXXX                                 
Sbjct: 118 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 177

Query: 164 AIIEAKRGEELLKAEETAAKYRATGTAPKKLLSCF 198
                     +LKAEETAAKYRATG  PK    CF
Sbjct: 178 XXXXXXXXXXVLKAEETAAKYRATGIVPKATCGCF 212

[Close]
BLAST of Carg25097 vs. TrEMBL
Match: tr|A0A2N9GSE5|A0A2N9GSE5_FAGSY (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS30474 PE=4 SV=1)

HSP 1 Score: 177.6 bits (449), Expect = 2.8e-41
Identity = 123/159 (77.36%), Postives = 138/159 (86.79%), Query Frame = 0 

Query: 40  PAPTPAEHKTDDSKALVLVEKVPEAGEAKSSEGSVNRDAVLAKVATEKRVSLIKAWEESE 99
           P+  PAE K  +SKAL +VEK PE    KS+EGSVNRDAVL +V T+KR+SLIKAWEESE
Sbjct: 41  PSTPPAEEKPVESKALAIVEKAPEYEAEKSTEGSVNRDAVLERVETQKRISLIKAWEESE 100

Query: 100 KSKAENXXXXXXXXXXXXXXXXXXXXXXXXKRIEENLEKKKAEYIEKMKNKIALLHKEAE 159
           KSKAEN XXXXXXXXXXXXXXXXXXXXXX K+IEE LEKKKA+Y+    NK+AL+HK AE
Sbjct: 101 KSKAENKXXXXXXXXXXXXXXXXXXXXXXLKQIEEQLEKKKAQYVXXXXNKVALIHKAAE 160

Query: 160 EKRAIIEAKRGEELLKAEETAAKYRATGTAPKKLLSCFS 199
           EKRA+IEAKRGE+LLKAEETAAKYRATGTAPKKLL+CFS
Sbjct: 161 EKRALIEAKRGEDLLKAEETAAKYRATGTAPKKLLTCFS 199

[Close]
BLAST of Carg25097 vs. TrEMBL
Match: tr|A0A2I4F9S2|A0A2I4F9S2_9ROSI (remorin-like isoform X1 OS=Juglans regia OX=51240 GN=LOC108996832 PE=4 SV=1)

HSP 1 Score: 176.4 bits (446), Expect = 6.3e-41
Identity = 123/148 (83.11%), Postives = 136/148 (91.89%), Query Frame = 0 

Query: 51  DSKALVLVEKVPEAGEAKSSEGSVNRDAVLAKVATEKRVSLIKAWEESEKSKAENXXXXX 110
           DSK+L +VEK PE  E KS+EGS+NRDAVLA+VATEKR+SLI+AWE+SEKSKAENXXXXX
Sbjct: 55  DSKSLAVVEKAPEYAEEKSTEGSINRDAVLARVATEKRLSLIRAWEDSEKSKAENXXXXX 114

Query: 111 XXXXXXXXXXXXXXXXXXXKRIEENLEKKKAEYIEKMKNKIALLHKEAEEKRAIIEAKRG 170
           XXXXXXXXXXXXXXXXXXX RIEE LE KKAEY+EKMKNK+AL+HKEAEEKRA+ EAKRG
Sbjct: 115 XXXXXXXXXXXXXXXXXXXXRIEEKLETKKAEYVEKMKNKVALIHKEAEEKRAVTEAKRG 174

Query: 171 EELLKAEETAAKYRATGTAPKKLLSCFS 199
           E+LLKAEETAAKYRATGT PKKLL  FS
Sbjct: 175 EDLLKAEETAAKYRATGTGPKKLLGWFS 202

[Close]
BLAST of Carg25097 vs. TrEMBL
Match: tr|A0A2C9VQY5|A0A2C9VQY5_MANES (Uncharacterized protein OS=Manihot esculenta OX=3983 GN=MANES_06G146800 PE=4 SV=1)

HSP 1 Score: 173.7 bits (439), Expect = 4.1e-40
Identity = 122/143 (85.31%), Postives = 131/143 (91.61%), Query Frame = 0 

Query: 55  LVLVEKVPEAGEAKSSEGSVNRDAVLAKVATEKRVSLIKAWEESEKSKAENXXXXXXXXX 114
           LV VEK PE+ EAKS+EGSVNRDAVLA+V TEKR+SLIKAWEESEKSKAE XXXXXXXXX
Sbjct: 54  LVAVEKAPESAEAKSTEGSVNRDAVLARVETEKRISLIKAWEESEKSKAEXXXXXXXXXX 113

Query: 115 XXXXXXXXXXXXXXXKRIEENLEKKKAEYIEKMKNKIALLHKEAEEKRAIIEAKRGEELL 174
           XXXXXXXXXXXXXX + IEE LEK KAEY+EKMKNKIAL+HK AEEKRA+IEAKRGE+LL
Sbjct: 114 XXXXXXXXXXXXXXLRHIEEKLEKTKAEYVEKMKNKIALIHKAAEEKRAMIEAKRGEDLL 173

Query: 175 KAEETAAKYRATGTAPKKLLSCF 198
           KAEE AAKYRATGTAPKKLL CF
Sbjct: 174 KAEEIAAKYRATGTAPKKLLGCF 196

[Close]
BLAST of Carg25097 vs. TrEMBL
Match: tr|A0A067F951|A0A067F951_CITSI (Uncharacterized protein OS=Citrus sinensis OX=2711 GN=CISIN_1g028549mg PE=4 SV=1)

HSP 1 Score: 172.9 bits (437), Expect = 7.0e-40
Identity = 123/157 (78.34%), Postives = 139/157 (88.54%), Query Frame = 0 

Query: 48  KTDDSKALVLVEKVPE----AGEAKSSEGSVNRDAVLAKVATEKRVSLIKAWEESEKSKA 107
           K ++SKAL +V+K PE    AGE KS+EGSVNRDAVLA+V TEKR+SLI+AWEESEKS+A
Sbjct: 52  KPEESKALAVVDKAPEAEPPAGE-KSTEGSVNRDAVLARVETEKRISLIRAWEESEKSQA 111

Query: 108 E-NXXXXXXXXXXXXXXXXXXXXXXXXKRIEENLEKKKAEYIEKMKNKIALLHKEAEEKR 167
           E N  XXXXXXXXXXXXXXXXXXX   K+IEE LEKKKAEY+EKMKNK+AL+HKEAEEKR
Sbjct: 112 ENNRAXXXXXXXXXXXXXXXXXXXAELKKIEEQLEKKKAEYVEKMKNKMALIHKEAEEKR 171

Query: 168 AIIEAKRGEELLKAEETAAKYRATGTAPKKLLSCFSS 200
           A+IEAKRGE+LLKAEE AAKYRATG+APKKLLSCF S
Sbjct: 172 AMIEAKRGEDLLKAEELAAKYRATGSAPKKLLSCFGS 207

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BLAST of Carg25097 vs. TrEMBL
Match: tr|I3T094|I3T094_LOTJA (Uncharacterized protein OS=Lotus japonicus OX=34305 PE=2 SV=1)

HSP 1 Score: 172.6 bits (436), Expect = 9.2e-40
Identity = 120/160 (75.00%), Postives = 136/160 (85.00%), Query Frame = 0 

Query: 39  VPAPTPAEHK-TDDSKALVLVEKVPEAGEAKSSEGSVNRDAVLAKVATEKRVSLIKAWEE 98
           +P P+P E K  DDSKA+V VEK  EA E K  EGS+NRDAVL +VATEKR+SLIKAWEE
Sbjct: 56  IPQPSPPESKPVDDSKAIVKVEKTQEAAEEKPLEGSINRDAVLTRVATEKRLSLIKAWEE 115

Query: 99  SEKSKAENXXXXXXXXXXXXXXXXXXXXXXXXKRIEENLEKKKAEYIEKMKNKIALLHKE 158
           SEKS A+N  XXXXXXXXXXXXXXXXXXXX  ++IEENLEKKKA Y+EK+KNKIA++H+E
Sbjct: 116 SEKSIADNKAXXXXXXXXXXXXXXXXXXXXELRKIEENLEKKKAVYVEKLKNKIAMVHRE 175

Query: 159 AEEKRAIIEAKRGEELLKAEETAAKYRATGTAPKKLLSCF 198
           AEEKRA IEAK+GE+LLKAEE AAKYRATGTAPKK  S F
Sbjct: 176 AEEKRAFIEAKKGEDLLKAEELAAKYRATGTAPKKPFSFF 215

The following BLAST results are available for this feature:
BLAST of Carg25097 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_022952053.11.3e-5898.15remorin-like [Cucurbita moschata][more]
XP_022971850.11.9e-5796.89remorin-like [Cucurbita maxima][more]
XP_011076174.14.6e-4379.87remorin-like isoform X1 [Sesamum indicum][more]
XP_020549033.16.6e-4279.87remorin-like isoform X2 [Sesamum indicum][more]
XP_021671668.16.6e-4285.62remorin-like [Hevea brasiliensis] >XP_021671669.1 remorin-like [Hevea brasiliens... [more]
BLAST of Carg25097 vs. TAIR10
Match NameE-valueIdentityDescription
AT3G48940.11.9e-1157.94Remorin family protein[more]
AT5G23750.18.2e-1051.68Remorin family protein[more]
AT2G45820.17.6e-0847.37Remorin family protein[more]
AT3G61260.17.6e-0847.74Remorin family protein[more]
BLAST of Carg25097 vs. Swiss-Prot
Match NameE-valueIdentityDescription
sp|P93788|REMO_SOLTU9.2e-1160.32Remorin OS=Solanum tuberosum OX=4113 PE=1 SV=1[more]
sp|O80837|REMO_ARATH1.4e-0647.37Remorin OS=Arabidopsis thaliana OX=3702 GN=DBP PE=1 SV=1[more]
sp|Q9M2D8|Y3126_ARATH1.4e-0647.74Uncharacterized protein At3g61260 OS=Arabidopsis thaliana OX=3702 GN=At3g61260 P... [more]
BLAST of Carg25097 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A2N9GSE5|A0A2N9GSE5_FAGSY2.8e-4177.36Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS30474 PE=4 SV=1[more]
tr|A0A2I4F9S2|A0A2I4F9S2_9ROSI6.3e-4183.11remorin-like isoform X1 OS=Juglans regia OX=51240 GN=LOC108996832 PE=4 SV=1[more]
tr|A0A2C9VQY5|A0A2C9VQY5_MANES4.1e-4085.31Uncharacterized protein OS=Manihot esculenta OX=3983 GN=MANES_06G146800 PE=4 SV=... [more]
tr|A0A067F951|A0A067F951_CITSI7.0e-4078.34Uncharacterized protein OS=Citrus sinensis OX=2711 GN=CISIN_1g028549mg PE=4 SV=1[more]
tr|I3T094|I3T094_LOTJA9.2e-4075.00Uncharacterized protein OS=Lotus japonicus OX=34305 PE=2 SV=1[more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR005516Remorin_C
IPR005518Remorin_N
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Carg25097-RACarg25097-RAmRNA


InterPro
Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 122..164
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..53
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 27..42
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..19
NoneNo IPR availablePANTHERPTHR31775:SF5REMORIN FAMILY PROTEIN-RELATEDcoord: 12..198
NoneNo IPR availablePANTHERPTHR31775FAMILY NOT NAMEDcoord: 12..198
IPR005518Remorin, N-terminalPFAMPF03766Remorin_Ncoord: 21..83
e-value: 6.9E-20
score: 70.7
IPR005516Remorin, C-terminalPFAMPF03763Remorin_Ccoord: 88..192
e-value: 1.8E-31
score: 108.1