Carg25084 (gene) Silver-seed gourd
The following sequences are available for this feature:
Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.AATTTCGGTTCCTCGTCGTTCGTATTTGCTCGGTTAGTTTTCGAAGCAATCAAATGGAAGCATTTTCATCTTTCTTTGATTCTCAAGCAGAATCCAGAAACCGTTGGAGCTATGATTCTCTCAAGAACTTCCGGCAGATTTCGCCGGTCGTTCAATCTCATCTCCAGATGGTTGGTTCCTCTATTCTTTTTTTTTTTTTTTCCTTCGATGTATTCCCACATCTGTCGTGATTTCATCCAGAAACGATGGTTCTAAATTAGGATTTGGATTTGGATTTCTCGATTTACGTTTCTCGTGTACGTGGTTGTTGTTGTGCGAATGAGTTTAAACGAAATGAATTTAATAGACTTTCGATTTAGGTTCGAAGATTTCTGTAAGAATGTATTTTATCGGTCGGTTGTTGATGGTTCGTAGTGTTGTCTCTTGGATTATTATATTCGATAGGTCTTTTTTTCCGTTTGTTCCATTTTCTTTTGAGCTGTTGAATGTTACATGCAATTGATCTGTGAGTTCTCTCTTTCTATAGAATTAATTTTGTGAAGTATTTCGAATCTGCAGGTTTACCTTACTCTCGGTTGTGCTTTAGTTGCATCAGCTGCTGGAGCATATCTGCATATCCTTTGGAACATTGGTGGTATTCTCACAACGCTTGCAGGTGTTGGAAGCATCGCATGGCTGATGGCCACTCCTCCTTATGAAGAGGTAGGTTTCTTTAACCATTTTATCATTTTGTTACCTCACTGTTGTATGTGTGATTTATGTTTATGCTTTCTCTGTTTGTTTGGTTTTTTTTTTTTATTTTTTTTTTATGCTCTTAATATCTATGTTTTTGTTTTATGTCTTGTTATTTGTCATCAGAAAAAGAGGATTTCTATTCTAATGGCGGCTGCTCTTCTCGAAGGAGCTTCAATTGGTCCTTTGATTGGTTTAGCTATTGAGATTGACTCGAGGTACGCTATGAATTCTTTGTTTATTCCATCTTTTGGAGTAGTGAACAGTTCTTATTATTCCTTTTACCGTAGTTTTGTGATTTGCTCATCTAGTTATTCGGCCTCTGTAATTGGCTGGGGTTGTTTTTACATTCTTGGTTCTAAAGGAGTGATGATTTTGTAAATGGTGTTGCTTCCAGTGTTCTGGTCAGTGCCTTCGTGGGAACTGCGGTGGCCTTTGGTTGTTTCTCAGCTGCAGCCATGTTGGCAAGACGCAGGGAATTCCTCTATCTGGGTGGCCTACTTTCTTCTGGAATATCAATGTTACTCTGGTTGCATTTCGCCTCCTCCATTTTCGGTGGTTCTACTGCCGTTTTCAAATTTGAGGTACGTATATCACTGTTGAATTTGGAGTTAGAAATAATCCCCTTGTAGAAGACTTTTCCTCAATTTCACTTGGTTTGCTGCATTTACTTGTAGTTGTACTTTGGGCTTTTGCTGTTTGTGGGCTACATGGTAGTTGATACTCAAGAGATAATTGAGAGGGCACATCTTGGTGATATGGACTATGTGAAGCATGCACTGACCCTGTTCACCGATTTCATCGGTGTTTTTGTCCGAATTCTCATTATAATGGTGAGTTGCGGTCTTCAATGCTTAGGTTTATAAAACATTACTTTGGGTGATTGATATGAAATGGGTGTTTCTTTTCCATTACCAATTGGGTTACTATTGTGCAGCTAAGGAACACTGCAGAGAAGAATGAGAAGAAGAAGAAGAAGAGGAGGGACTAGATGCTAAACGCCAAATGCTACGCTTTGTGGTGGATATATTGTAAATTGTGGTAGGCTGTTCTTGTAATTTTGCTTGTCTAAGCAGAGAAATAAGATAGGGACTTGGTTTTTGTTCCTTACTTTTCCACCGCTGTGAAATGTTCTTGGTTCCTTCTCCTGTTCGTTGTCAACTTTTAATTTGTGCTTTTTTCTTATTCCAGAATTTTAGGCAAAGTGAGTCATATATATCATGAAGCT AATTTCGGTTCCTCGTCGTTCGTATTTGCTCGGTTAGTTTTCGAAGCAATCAAATGGAAGCATTTTCATCTTTCTTTGATTCTCAAGCAGAATCCAGAAACCGTTGGAGCTATGATTCTCTCAAGAACTTCCGGCAGATTTCGCCGGTCGTTCAATCTCATCTCCAGATGGTTTACCTTACTCTCGGTTGTGCTTTAGTTGCATCAGCTGCTGGAGCATATCTGCATATCCTTTGGAACATTGGTGGTATTCTCACAACGCTTGCAGGTGTTGGAAGCATCGCATGGCTGATGGCCACTCCTCCTTATGAAGAGAAAAAGAGGATTTCTATTCTAATGGCGGCTGCTCTTCTCGAAGGAGCTTCAATTGGTCCTTTGATTGGTTTAGCTATTGAGATTGACTCGAGGAGTGATGATTTTGTAAATGGTGTTGCTTCCAGTGTTCTGGTCAGTGCCTTCGTGGGAACTGCGGTGGCCTTTGGTTGTTTCTCAGCTGCAGCCATGTTGGCAAGACGCAGGGAATTCCTCTATCTGGGTGGCCTACTTTCTTCTGGAATATCAATGTTACTCTGGTTGCATTTCGCCTCCTCCATTTTCGGTGGTTCTACTGCCGTTTTCAAATTTGAGTTGTACTTTGGGCTTTTGCTGTTTGTGGGCTACATGGTAGTTGATACTCAAGAGATAATTGAGAGGGCACATCTTGGTGATATGGACTATGTGAAGCATGCACTGACCCTGTTCACCGATTTCATCGGTGTTTTTGTCCGAATTCTCATTATAATGCTAAGGAACACTGCAGAGAAGAATGAGAAGAAGAAGAAGAAGAGGAGGGACTAGATGCTAAACGCCAAATGCTACGCTTTGTGGTGGATATATTGTAAATTGTGGTAGGCTGTTCTTGTAATTTTGCTTGTCTAAGCAGAGAAATAAGATAGGGACTTGGTTTTTGTTCCTTACTTTTCCACCGCTGTGAAATGTTCTTGGTTCCTTCTCCTGTTCGTTGTCAACTTTTAATTTGTGCTTTTTTCTTATTCCAGAATTTTAGGCAAAGTGAGTCATATATATCATGAAGCT ATGGAAGCATTTTCATCTTTCTTTGATTCTCAAGCAGAATCCAGAAACCGTTGGAGCTATGATTCTCTCAAGAACTTCCGGCAGATTTCGCCGGTCGTTCAATCTCATCTCCAGATGGTTTACCTTACTCTCGGTTGTGCTTTAGTTGCATCAGCTGCTGGAGCATATCTGCATATCCTTTGGAACATTGGTGGTATTCTCACAACGCTTGCAGGTGTTGGAAGCATCGCATGGCTGATGGCCACTCCTCCTTATGAAGAGAAAAAGAGGATTTCTATTCTAATGGCGGCTGCTCTTCTCGAAGGAGCTTCAATTGGTCCTTTGATTGGTTTAGCTATTGAGATTGACTCGAGGAGTGATGATTTTGTAAATGGTGTTGCTTCCAGTGTTCTGGTCAGTGCCTTCGTGGGAACTGCGGTGGCCTTTGGTTGTTTCTCAGCTGCAGCCATGTTGGCAAGACGCAGGGAATTCCTCTATCTGGGTGGCCTACTTTCTTCTGGAATATCAATGTTACTCTGGTTGCATTTCGCCTCCTCCATTTTCGGTGGTTCTACTGCCGTTTTCAAATTTGAGTTGTACTTTGGGCTTTTGCTGTTTGTGGGCTACATGGTAGTTGATACTCAAGAGATAATTGAGAGGGCACATCTTGGTGATATGGACTATGTGAAGCATGCACTGACCCTGTTCACCGATTTCATCGGTGTTTTTGTCCGAATTCTCATTATAATGCTAAGGAACACTGCAGAGAAGAATGAGAAGAAGAAGAAGAAGAGGAGGGACTAG MEAFSSFFDSQAESRNRWSYDSLKNFRQISPVVQSHLQMVYLTLGCALVASAAGAYLHILWNIGGILTTLAGVGSIAWLMATPPYEEKKRISILMAAALLEGASIGPLIGLAIEIDSRSDDFVNGVASSVLVSAFVGTAVAFGCFSAAAMLARRREFLYLGGLLSSGISMLLWLHFASSIFGGSTAVFKFELYFGLLLFVGYMVVDTQEIIERAHLGDMDYVKHALTLFTDFIGVFVRILIIMLRNTAEKNEKKKKKRRD
BLAST of Carg25084 vs. NCBI nr
Match: XP_023554186.1 (bax inhibitor 1-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 436.8 bits (1122), Expect = 5.1e-119 Identity = 236/247 (95.55%), Postives = 236/247 (95.55%), Query Frame = 0
BLAST of Carg25084 vs. NCBI nr
Match: XP_022931787.1 (bax inhibitor 1-like [Cucurbita moschata]) HSP 1 Score: 424.9 bits (1091), Expect = 2.0e-115 Identity = 229/241 (95.02%), Postives = 230/241 (95.44%), Query Frame = 0
BLAST of Carg25084 vs. NCBI nr
Match: XP_022971847.1 (bax inhibitor 1-like [Cucurbita maxima]) HSP 1 Score: 422.2 bits (1084), Expect = 1.3e-114 Identity = 227/241 (94.19%), Postives = 229/241 (95.02%), Query Frame = 0
BLAST of Carg25084 vs. NCBI nr
Match: XP_008465888.1 (PREDICTED: bax inhibitor 1-like [Cucumis melo]) HSP 1 Score: 406.0 bits (1042), Expect = 9.7e-110 Identity = 215/247 (87.04%), Postives = 227/247 (91.90%), Query Frame = 0
BLAST of Carg25084 vs. NCBI nr
Match: XP_004148360.1 (PREDICTED: bax inhibitor 1-like [Cucumis sativus]) HSP 1 Score: 405.6 bits (1041), Expect = 1.3e-109 Identity = 215/247 (87.04%), Postives = 226/247 (91.50%), Query Frame = 0
BLAST of Carg25084 vs. TAIR10
Match: AT5G47120.1 (BAX inhibitor 1) HSP 1 Score: 344.4 bits (882), Expect = 6.3e-95 Identity = 177/241 (73.44%), Postives = 210/241 (87.14%), Query Frame = 0
BLAST of Carg25084 vs. TAIR10
Match: AT4G17580.1 (Bax inhibitor-1 family protein) HSP 1 Score: 223.8 bits (569), Expect = 1.2e-58 Identity = 130/238 (54.62%), Postives = 164/238 (68.91%), Query Frame = 0
BLAST of Carg25084 vs. TAIR10
Match: AT5G47130.1 (Bax inhibitor-1 family protein) HSP 1 Score: 161.8 bits (408), Expect = 5.8e-40 Identity = 94/183 (51.37%), Postives = 126/183 (68.85%), Query Frame = 0
BLAST of Carg25084 vs. Swiss-Prot
Match: sp|Q9LD45|BI1_ARATH (Bax inhibitor 1 OS=Arabidopsis thaliana OX=3702 GN=BI-1 PE=1 SV=1) HSP 1 Score: 344.4 bits (882), Expect = 1.1e-93 Identity = 177/241 (73.44%), Postives = 210/241 (87.14%), Query Frame = 0
BLAST of Carg25084 vs. Swiss-Prot
Match: sp|Q9MBD8|BI1_ORYSJ (Bax inhibitor 1 OS=Oryza sativa subsp. japonica OX=39947 GN=BI1 PE=2 SV=1) HSP 1 Score: 313.5 bits (802), Expect = 2.1e-84 Identity = 165/246 (67.07%), Postives = 198/246 (80.49%), Query Frame = 0
BLAST of Carg25084 vs. Swiss-Prot
Match: sp|Q9IA79|BI1_PAROL (Probable Bax inhibitor 1 OS=Paralichthys olivaceus OX=8255 GN=tmbim6 PE=2 SV=1) HSP 1 Score: 160.6 bits (405), Expect = 2.3e-38 Identity = 95/232 (40.95%), Postives = 146/232 (62.93%), Query Frame = 0
BLAST of Carg25084 vs. Swiss-Prot
Match: sp|Q0V882|BI1_BOVIN (Bax inhibitor 1 OS=Bos taurus OX=9913 GN=TMBIM6 PE=2 SV=1) HSP 1 Score: 157.1 bits (396), Expect = 2.6e-37 Identity = 90/232 (38.79%), Postives = 144/232 (62.07%), Query Frame = 0
BLAST of Carg25084 vs. Swiss-Prot
Match: sp|Q9D2C7|BI1_MOUSE (Bax inhibitor 1 OS=Mus musculus OX=10090 GN=Tmbim6 PE=1 SV=1) HSP 1 Score: 155.6 bits (392), Expect = 7.5e-37 Identity = 90/232 (38.79%), Postives = 143/232 (61.64%), Query Frame = 0
BLAST of Carg25084 vs. TrEMBL
Match: tr|A0A1S3CPY0|A0A1S3CPY0_CUCME (bax inhibitor 1-like OS=Cucumis melo OX=3656 GN=LOC103503472 PE=3 SV=1) HSP 1 Score: 406.0 bits (1042), Expect = 6.4e-110 Identity = 215/247 (87.04%), Postives = 227/247 (91.90%), Query Frame = 0
BLAST of Carg25084 vs. TrEMBL
Match: tr|A0A0A0LFB8|A0A0A0LFB8_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G912950 PE=3 SV=1) HSP 1 Score: 405.6 bits (1041), Expect = 8.4e-110 Identity = 215/247 (87.04%), Postives = 226/247 (91.50%), Query Frame = 0
BLAST of Carg25084 vs. TrEMBL
Match: tr|A0A1S3CPW8|A0A1S3CPW8_CUCME (bax inhibitor 1-like OS=Cucumis melo OX=3656 GN=LOC103503475 PE=3 SV=1) HSP 1 Score: 391.0 bits (1003), Expect = 2.1e-105 Identity = 208/247 (84.21%), Postives = 220/247 (89.07%), Query Frame = 0
BLAST of Carg25084 vs. TrEMBL
Match: tr|A0A0A0LID1|A0A0A0LID1_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G912940 PE=3 SV=1) HSP 1 Score: 384.4 bits (986), Expect = 2.0e-103 Identity = 204/247 (82.59%), Postives = 219/247 (88.66%), Query Frame = 0
BLAST of Carg25084 vs. TrEMBL
Match: tr|R9VYW4|R9VYW4_CUCSA (BAX inhibitor-1 (Fragment) OS=Cucumis sativus OX=3659 GN=BI-1 PE=2 SV=1) HSP 1 Score: 382.5 bits (981), Expect = 7.6e-103 Identity = 203/246 (82.52%), Postives = 218/246 (88.62%), Query Frame = 0
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07
The following gene(s) are orthologous to this gene: None The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene:
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