Carg25081 (gene) Silver-seed gourd

Overview
NameCarg25081
Typegene
OrganismCucurbita argyrosperma (Silver-seed gourd)
DescriptionGATA transcription factor 26-like
LocationCucurbita_argyrosperma_scaffold_072 : 126447 .. 127189 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCTAGCCAATATTTATGGTTCTCAAGCGACCCGGGCGCGTCGATGGAGAAGAAGTGTTATTCATCACATTGATCACTACTATGGCTTACCTCATGTCATATTGGTCTTCAGTAATTTGCCTGCAACGTCTCTATGTAACGTGAGCTTGGGTAGTTAGATATCGACTTTTTGTAAGTTGGGCAACATGTTATACCATCTCCATGCATTATTCTACCAGAAACTTATTGAGTTCTTATGAAACAATGGATAAAAGTTGGAACAACTCTTGTTCTTTGCTTTGTTGTATTGAAAATTCTACAGTTTCATTGATTGTTAGTTTAAGAATCTTTACTTCTGAGTATCTAATGCCCAAATGCTGGGACAGACACTCCTCTTTGGCGTAATGGACCTCCCGACAAACCGGTGTTATGCAATGCGTGTGGATCCCGATGGAGGACGAAAGGAACACTCACAAACTATACCCCGTTGCATGCTCGGACTGTTCCTGATGAATATGAAGATCACAGGGCTTCCAGGGTGAAGAGCATTTCAATAAATAAAAATAAAGAAGTAAAACTGCTGAAACGAAAGCTACAACAAGCCGATGGATCGATTGCGTGGATGCTTCCCGATCAAGGTCAGGATTACCATAGAGTAGTGGATGAAGACACAAGCAATAGGTCGAGTTCTGGATCGGCCATATCTAATCCTGAGAGTTGTGCCCATTTCAGCAGTGCAGATGCAAGTGATTTGACAGGTTAA

mRNA sequence

ATGCTAGCCAATATTTATGGTTCTCAAGCGACCCGGGCGCGTCGATGGAGAAGAAGTGTTATTCATCACATTGATCACTACTATGGCTTACCTCATGTCATATTGGTCTTCAGTAATTTGCCTGCAACGTCTCTATACACTCCTCTTTGGCGTAATGGACCTCCCGACAAACCGGTGTTATGCAATGCGTGTGGATCCCGATGGAGGACGAAAGGAACACTCACAAACTATACCCCGTTGCATGCTCGGACTGTTCCTGATGAATATGAAGATCACAGGGCTTCCAGGGTGAAGAGCATTTCAATAAATAAAAATAAAGAAGTAAAACTGCTGAAACGAAAGCTACAACAAGCCGATGGATCGATTGCGTGGATGCTTCCCGATCAAGGTCAGGATTACCATAGAGTAGTGGATGAAGACACAAGCAATAGGTCGAGTTCTGGATCGGCCATATCTAATCCTGAGAGTTGTGCCCATTTCAGCAGTGCAGATGCAAGTGATTTGACAGGTTAA

Coding sequence (CDS)

ATGCTAGCCAATATTTATGGTTCTCAAGCGACCCGGGCGCGTCGATGGAGAAGAAGTGTTATTCATCACATTGATCACTACTATGGCTTACCTCATGTCATATTGGTCTTCAGTAATTTGCCTGCAACGTCTCTATACACTCCTCTTTGGCGTAATGGACCTCCCGACAAACCGGTGTTATGCAATGCGTGTGGATCCCGATGGAGGACGAAAGGAACACTCACAAACTATACCCCGTTGCATGCTCGGACTGTTCCTGATGAATATGAAGATCACAGGGCTTCCAGGGTGAAGAGCATTTCAATAAATAAAAATAAAGAAGTAAAACTGCTGAAACGAAAGCTACAACAAGCCGATGGATCGATTGCGTGGATGCTTCCCGATCAAGGTCAGGATTACCATAGAGTAGTGGATGAAGACACAAGCAATAGGTCGAGTTCTGGATCGGCCATATCTAATCCTGAGAGTTGTGCCCATTTCAGCAGTGCAGATGCAAGTGATTTGACAGGTTAA

Protein sequence

MLANIYGSQATRARRWRRSVIHHIDHYYGLPHVILVFSNLPATSLYTPLWRNGPPDKPVLCNACGSRWRTKGTLTNYTPLHARTVPDEYEDHRASRVKSISINKNKEVKLLKRKLQQADGSIAWMLPDQGQDYHRVVDEDTSNRSSSGSAISNPESCAHFSSADASDLTG
Homology
[Close]
BLAST of Carg25081 vs. NCBI nr
Match: XP_022971837.1 (GATA transcription factor 26-like [Cucurbita maxima])

HSP 1 Score: 255.0 bits (650), Expect = 1.8e-64
Identity = 123/124 (99.19%), Postives = 123/124 (99.19%), Query Frame = 0 

Query: 47  TPLWRNGPPDKPVLCNACGSRWRTKGTLTNYTPLHARTVPDEYEDHRASRVKSISINKNK 106
           TPLWRNGPPDKPVLCNACGSRWRTKGTLTNYTPLHARTVPDEYEDHRASRVKSISINKNK
Sbjct: 15  TPLWRNGPPDKPVLCNACGSRWRTKGTLTNYTPLHARTVPDEYEDHRASRVKSISINKNK 74

Query: 107 EVKLLKRKLQQADGSIAWMLPDQGQDYHRVVDEDTSNRSSSGSAISNPESCAHFSSADAS 166
           EVKLLKRKLQQADGSIAWMLPDQGQDYHRVVDEDTSNRSSSGS ISNPESCAHFSSADAS
Sbjct: 75  EVKLLKRKLQQADGSIAWMLPDQGQDYHRVVDEDTSNRSSSGSVISNPESCAHFSSADAS 134

Query: 167 DLTG 171
           DLTG
Sbjct: 135 DLTG 138

[Close]
BLAST of Carg25081 vs. NCBI nr
Match: XP_023554174.1 (GATA transcription factor 26-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 254.2 bits (648), Expect = 3.1e-64
Identity = 123/124 (99.19%), Postives = 123/124 (99.19%), Query Frame = 0 

Query: 47  TPLWRNGPPDKPVLCNACGSRWRTKGTLTNYTPLHARTVPDEYEDHRASRVKSISINKNK 106
           TPLWRNGPPDKPVLCNACGSRWRTKGTLTNYTPLHARTVPDEYEDHRASRVKSISINKNK
Sbjct: 15  TPLWRNGPPDKPVLCNACGSRWRTKGTLTNYTPLHARTVPDEYEDHRASRVKSISINKNK 74

Query: 107 EVKLLKRKLQQADGSIAWMLPDQGQDYHRVVDEDTSNRSSSGSAISNPESCAHFSSADAS 166
           EVKLLKRKLQQADGSIAW LPDQGQDYHRVVDEDTSNRSSSGSAISNPESCAHFSSADAS
Sbjct: 75  EVKLLKRKLQQADGSIAWTLPDQGQDYHRVVDEDTSNRSSSGSAISNPESCAHFSSADAS 134

Query: 167 DLTG 171
           DLTG
Sbjct: 135 DLTG 138

[Close]
BLAST of Carg25081 vs. NCBI nr
Match: XP_022931794.1 (GATA transcription factor 26-like [Cucurbita moschata])

HSP 1 Score: 252.7 bits (644), Expect = 9.0e-64
Identity = 122/124 (98.39%), Postives = 122/124 (98.39%), Query Frame = 0 

Query: 47  TPLWRNGPPDKPVLCNACGSRWRTKGTLTNYTPLHARTVPDEYEDHRASRVKSISINKNK 106
           TPLWRNGPPDKPVLCNACGSRWRTKGTLTNYTPLHARTVPDEYEDHRASRVKSISINKNK
Sbjct: 15  TPLWRNGPPDKPVLCNACGSRWRTKGTLTNYTPLHARTVPDEYEDHRASRVKSISINKNK 74

Query: 107 EVKLLKRKLQQADGSIAWMLPDQGQDYHRVVDEDTSNRSSSGSAISNPESCAHFSSADAS 166
           EVKLLKRKLQQADGSI W LPDQGQDYHRVVDEDTSNRSSSGSAISNPESCAHFSSADAS
Sbjct: 75  EVKLLKRKLQQADGSIGWTLPDQGQDYHRVVDEDTSNRSSSGSAISNPESCAHFSSADAS 134

Query: 167 DLTG 171
           DLTG
Sbjct: 135 DLTG 138

[Close]
BLAST of Carg25081 vs. NCBI nr
Match: XP_004148382.1 (PREDICTED: GATA transcription factor 26-like [Cucumis sativus])

HSP 1 Score: 242.3 bits (617), Expect = 1.2e-60
Identity = 116/124 (93.55%), Postives = 118/124 (95.16%), Query Frame = 0 

Query: 47  TPLWRNGPPDKPVLCNACGSRWRTKGTLTNYTPLHARTVPDEYEDHRASRVKSISINKNK 106
           TPLWRNGPPDKPVLCNACGSRWRTKGTL NYTPLHAR  PDEYEDHR SR+KSISINKNK
Sbjct: 15  TPLWRNGPPDKPVLCNACGSRWRTKGTLANYTPLHARADPDEYEDHRVSRMKSISINKNK 74

Query: 107 EVKLLKRKLQQADGSIAWMLPDQGQDYHRVVDEDTSNRSSSGSAISNPESCAHFSSADAS 166
           EVKLLKRKLQQADGSI WM+PDQGQ YHRVVDEDTSNRSSSGSAISNPESCAHFSSADAS
Sbjct: 75  EVKLLKRKLQQADGSIGWMIPDQGQGYHRVVDEDTSNRSSSGSAISNPESCAHFSSADAS 134

Query: 167 DLTG 171
           DLTG
Sbjct: 135 DLTG 138

[Close]
BLAST of Carg25081 vs. NCBI nr
Match: KGN60460.1 (hypothetical protein Csa_3G912920 [Cucumis sativus])

HSP 1 Score: 242.3 bits (617), Expect = 1.2e-60
Identity = 116/124 (93.55%), Postives = 118/124 (95.16%), Query Frame = 0 

Query: 47  TPLWRNGPPDKPVLCNACGSRWRTKGTLTNYTPLHARTVPDEYEDHRASRVKSISINKNK 106
           TPLWRNGPPDKPVLCNACGSRWRTKGTL NYTPLHAR  PDEYEDHR SR+KSISINKNK
Sbjct: 15  TPLWRNGPPDKPVLCNACGSRWRTKGTLANYTPLHARADPDEYEDHRVSRMKSISINKNK 74

Query: 107 EVKLLKRKLQQADGSIAWMLPDQGQDYHRVVDEDTSNRSSSGSAISNPESCAHFSSADAS 166
           EVKLLKRKLQQADGSI WM+PDQGQ YHRVVDEDTSNRSSSGSAISNPESCAHFSSADAS
Sbjct: 75  EVKLLKRKLQQADGSIGWMIPDQGQGYHRVVDEDTSNRSSSGSAISNPESCAHFSSADAS 134

Query: 167 DLTG 171
           DLTG
Sbjct: 135 DLTG 138

[Close]
BLAST of Carg25081 vs. TAIR10
Match: AT4G17570.2 (GATA transcription factor 26)

HSP 1 Score: 157.1 bits (396), Expect = 9.3e-39
Identity = 85/128 (66.41%), Postives = 98/128 (76.56%), Query Frame = 0 

Query: 46  YTPLWRNGPPDKPVLCNACGSRWRTKGTLTNYTPLHARTVPDEYED-HRASRVKSISI-N 105
           YTPLWRNGPP+KPVLCNACGSRWRTKGTL NYTPLHAR   DE +D HR  R+KSIS+ N
Sbjct: 26  YTPLWRNGPPEKPVLCNACGSRWRTKGTLVNYTPLHARADGDENDDHHRFQRMKSISLGN 85

Query: 106 KNKEVKLLKRKLQQADGSIAWMLPDQGQDYH-RVVDEDTSNRSSSGSAISNPESCAHFSS 165
           KNKE+K+LKRK  Q +  I   + +        V++ED SNRSSSGSA+SN ESCA FSS
Sbjct: 86  KNKEIKMLKRKAIQENIIIKRPVFEFSYGLKAAVIEEDASNRSSSGSAVSNSESCAQFSS 145

Query: 166 ADASDLTG 171
           AD S+LTG
Sbjct: 146 ADGSELTG 153

[Close]
BLAST of Carg25081 vs. TAIR10
Match: AT5G47140.1 (GATA transcription factor 27)

HSP 1 Score: 119.8 bits (299), Expect = 1.7e-27
Identity = 68/125 (54.40%), Postives = 85/125 (68.00%), Query Frame = 0 

Query: 47  TPLWRNGPPDKPVLCNACGSRWRTKGTLTNYTPLHARTVPD--EYEDHRASRV--KSISI 106
           TPLWRNGPP+KPVLCNACGSRWRTKG+L NYTPLHAR   D  E EDHR   V  K +S+
Sbjct: 15  TPLWRNGPPEKPVLCNACGSRWRTKGSLVNYTPLHARAEGDETEIEDHRTQTVMIKGMSL 74

Query: 107 NKNKEVKLLKRKLQQADGSIAWMLPDQGQDYHR-VVDEDTSNRSSSGSAISNPESCAHFS 166
           NK    K+ KRK  Q + ++     +    + R  +DE+ SNRSSSGS +SN ESCA  +
Sbjct: 75  NK----KIPKRKPYQENFTVKRANLEFHTGFKRKALDEEASNRSSSGSVVSNSESCAQSN 134

[Close]
BLAST of Carg25081 vs. TAIR10
Match: AT3G21175.1 (ZIM-like 1)

HSP 1 Score: 47.8 bits (112), Expect = 8.0e-06
Identity = 25/77 (32.47%), Postives = 38/77 (49.35%), Query Frame = 0 

Query: 47  TPLWRNGPPDKPVLCNACGSRWRTKGTLTNYTPLHARTVPDEYEDHRASRVKSISINKNK 106
           TP+ R GP     LCNACG  W  KGTL +     ++  P +   H       +S+NKN+
Sbjct: 229 TPMMRRGPDGPRTLCNACGLMWANKGTLRDL----SKVPPPQTPQH-------LSLNKNE 288

Query: 107 EVKLLKRKLQQADGSIA 124
           +  L   ++ +  G I+
Sbjct: 289 DANLEADQMMEVTGDIS 294

[Close]
BLAST of Carg25081 vs. TAIR10
Match: AT3G45170.1 (GATA transcription factor 14)

HSP 1 Score: 45.4 bits (106), Expect = 4.0e-05
Identity = 19/33 (57.58%), Postives = 20/33 (60.61%), Query Frame = 0 

Query: 47  TPLWRNGPPDKPVLCNACGSRWRTKGTLTNYTP 80
           TPLWR GP     LCNACG R+RT   L  Y P
Sbjct: 125 TPLWREGPRGAGTLCNACGMRYRTGRLLPEYRP 157

[Close]
BLAST of Carg25081 vs. TAIR10
Match: AT3G51080.1 (GATA transcription factor 6)

HSP 1 Score: 44.7 bits (104), Expect = 6.8e-05
Identity = 23/61 (37.70%), Postives = 31/61 (50.82%), Query Frame = 0 

Query: 47  TPLWRNGPPDKPVLCNACGSRWRTKGTLTNYTPLHARTVPDEYEDHRASRVKSISINKNK 106
           TP WR GP     LCNACG R+++   L  Y P  + T   E   +  S+V  I + + K
Sbjct: 231 TPQWRAGPLGAKTLCNACGVRYKSGRLLPEYRPACSPTFSSELHSNHHSKV--IEMRRKK 289

Query: 107 E 108
           E
Sbjct: 291 E 289

[Close]
BLAST of Carg25081 vs. Swiss-Prot
Match: sp|Q8W4H1|GAT26_ARATH (GATA transcription factor 26 OS=Arabidopsis thaliana OX=3702 GN=GATA26 PE=2 SV=1)

HSP 1 Score: 147.9 bits (372), Expect = 1.0e-34
Identity = 81/123 (65.85%), Postives = 93/123 (75.61%), Query Frame = 0 

Query: 47  TPLWRNGPPDKPVLCNACGSRWRTKGTLTNYTPLHARTVPDEYED-HRASRVKSISI-NK 106
           TPLWRNGPP+KPVLCNACGSRWRTKGTL NYTPLHAR   DE +D HR  R+KSIS+ NK
Sbjct: 15  TPLWRNGPPEKPVLCNACGSRWRTKGTLVNYTPLHARADGDENDDHHRFQRMKSISLGNK 74

Query: 107 NKEVKLLKRKLQQADGSIAWMLPDQGQDYH-RVVDEDTSNRSSSGSAISNPESCAHFSSA 166
           NKE+K+LKRK  Q +  I   + +        V++ED SNRSSSGSA+SN ESCA FSSA
Sbjct: 75  NKEIKMLKRKAIQENIIIKRPVFEFSYGLKAAVIEEDASNRSSSGSAVSNSESCAQFSSA 134

[Close]
BLAST of Carg25081 vs. Swiss-Prot
Match: sp|Q5PP38|GAT27_ARATH (GATA transcription factor 27 OS=Arabidopsis thaliana OX=3702 GN=GATA27 PE=2 SV=1)

HSP 1 Score: 119.8 bits (299), Expect = 3.0e-26
Identity = 68/125 (54.40%), Postives = 85/125 (68.00%), Query Frame = 0 

Query: 47  TPLWRNGPPDKPVLCNACGSRWRTKGTLTNYTPLHARTVPD--EYEDHRASRV--KSISI 106
           TPLWRNGPP+KPVLCNACGSRWRTKG+L NYTPLHAR   D  E EDHR   V  K +S+
Sbjct: 15  TPLWRNGPPEKPVLCNACGSRWRTKGSLVNYTPLHARAEGDETEIEDHRTQTVMIKGMSL 74

Query: 107 NKNKEVKLLKRKLQQADGSIAWMLPDQGQDYHR-VVDEDTSNRSSSGSAISNPESCAHFS 166
           NK    K+ KRK  Q + ++     +    + R  +DE+ SNRSSSGS +SN ESCA  +
Sbjct: 75  NK----KIPKRKPYQENFTVKRANLEFHTGFKRKALDEEASNRSSSGSVVSNSESCAQSN 134

[Close]
BLAST of Carg25081 vs. Swiss-Prot
Match: sp|Q8GXL7|GAT24_ARATH (GATA transcription factor 24 OS=Arabidopsis thaliana OX=3702 GN=GATA24 PE=1 SV=2)

HSP 1 Score: 47.8 bits (112), Expect = 1.4e-04
Identity = 25/77 (32.47%), Postives = 38/77 (49.35%), Query Frame = 0 

Query: 47  TPLWRNGPPDKPVLCNACGSRWRTKGTLTNYTPLHARTVPDEYEDHRASRVKSISINKNK 106
           TP+ R GP     LCNACG  W  KGTL +     ++  P +   H       +S+NKN+
Sbjct: 229 TPMMRRGPDGPRTLCNACGLMWANKGTLRDL----SKVPPPQTPQH-------LSLNKNE 288

Query: 107 EVKLLKRKLQQADGSIA 124
           +  L   ++ +  G I+
Sbjct: 289 DANLEADQMMEVTGDIS 294

[Close]
BLAST of Carg25081 vs. Swiss-Prot
Match: sp|Q9M1U2|GAT14_ARATH (GATA transcription factor 14 OS=Arabidopsis thaliana OX=3702 GN=GATA14 PE=2 SV=1)

HSP 1 Score: 45.4 bits (106), Expect = 7.1e-04
Identity = 19/33 (57.58%), Postives = 20/33 (60.61%), Query Frame = 0 

Query: 47  TPLWRNGPPDKPVLCNACGSRWRTKGTLTNYTP 80
           TPLWR GP     LCNACG R+RT   L  Y P
Sbjct: 125 TPLWREGPRGAGTLCNACGMRYRTGRLLPEYRP 157

[Close]
BLAST of Carg25081 vs. Swiss-Prot
Match: sp|Q550D5|GTAA_DICDI (Transcription factor stalky OS=Dictyostelium discoideum OX=44689 GN=stkA PE=1 SV=1)

HSP 1 Score: 45.4 bits (106), Expect = 7.1e-04
Identity = 18/29 (62.07%), Postives = 19/29 (65.52%), Query Frame = 0 

Query: 44  SLYTPLWRNGPPDKPVLCNACGSRWRTKG 73
           S  TP WR GP  K  LCNACG +WR KG
Sbjct: 299 SSQTPTWRRGPSGKGSLCNACGIKWRLKG 327

[Close]
BLAST of Carg25081 vs. TrEMBL
Match: tr|A0A0A0LEK2|A0A0A0LEK2_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G912920 PE=4 SV=1)

HSP 1 Score: 242.3 bits (617), Expect = 8.0e-61
Identity = 116/124 (93.55%), Postives = 118/124 (95.16%), Query Frame = 0 

Query: 47  TPLWRNGPPDKPVLCNACGSRWRTKGTLTNYTPLHARTVPDEYEDHRASRVKSISINKNK 106
           TPLWRNGPPDKPVLCNACGSRWRTKGTL NYTPLHAR  PDEYEDHR SR+KSISINKNK
Sbjct: 15  TPLWRNGPPDKPVLCNACGSRWRTKGTLANYTPLHARADPDEYEDHRVSRMKSISINKNK 74

Query: 107 EVKLLKRKLQQADGSIAWMLPDQGQDYHRVVDEDTSNRSSSGSAISNPESCAHFSSADAS 166
           EVKLLKRKLQQADGSI WM+PDQGQ YHRVVDEDTSNRSSSGSAISNPESCAHFSSADAS
Sbjct: 75  EVKLLKRKLQQADGSIGWMIPDQGQGYHRVVDEDTSNRSSSGSAISNPESCAHFSSADAS 134

Query: 167 DLTG 171
           DLTG
Sbjct: 135 DLTG 138

[Close]
BLAST of Carg25081 vs. TrEMBL
Match: tr|A0A1S3CQA3|A0A1S3CQA3_CUCME (GATA transcription factor 26-like OS=Cucumis melo OX=3656 GN=LOC103503476 PE=4 SV=1)

HSP 1 Score: 238.0 bits (606), Expect = 1.5e-59
Identity = 113/124 (91.13%), Postives = 117/124 (94.35%), Query Frame = 0 

Query: 47  TPLWRNGPPDKPVLCNACGSRWRTKGTLTNYTPLHARTVPDEYEDHRASRVKSISINKNK 106
           TPLWRNGPPDKPVLCNACGSRWRTKGTL NYTPLHAR  PDEYEDH+ SR+KSIS+NKNK
Sbjct: 15  TPLWRNGPPDKPVLCNACGSRWRTKGTLANYTPLHARADPDEYEDHKVSRMKSISLNKNK 74

Query: 107 EVKLLKRKLQQADGSIAWMLPDQGQDYHRVVDEDTSNRSSSGSAISNPESCAHFSSADAS 166
           EVKLLKRKLQQADGS  WM+PDQGQ YHRVVDEDTSNRSSSGSAISNPESCAHFSSADAS
Sbjct: 75  EVKLLKRKLQQADGSSGWMIPDQGQGYHRVVDEDTSNRSSSGSAISNPESCAHFSSADAS 134

Query: 167 DLTG 171
           DLTG
Sbjct: 135 DLTG 138

[Close]
BLAST of Carg25081 vs. TrEMBL
Match: tr|A0A2I4F0C5|A0A2I4F0C5_9ROSI (GATA transcription factor 26-like isoform X6 OS=Juglans regia OX=51240 GN=LOC108994378 PE=4 SV=1)

HSP 1 Score: 199.5 bits (506), Expect = 6.0e-48
Identity = 97/124 (78.23%), Postives = 107/124 (86.29%), Query Frame = 0 

Query: 47  TPLWRNGPPDKPVLCNACGSRWRTKGTLTNYTPLHARTVPDEYEDHRASRVKSISINKNK 106
           TPLWRNGPP+KPVLCNACGSRWRTKGTL NYTPLHAR  PDEYEDHR SR+KSISINKNK
Sbjct: 15  TPLWRNGPPEKPVLCNACGSRWRTKGTLANYTPLHARAEPDEYEDHRVSRMKSISINKNK 74

Query: 107 EVKLLKRKLQQADGSIAWMLPDQGQDYHRVVDEDTSNRSSSGSAISNPESCAHFSSADAS 166
           EVKLLKRK +  +  +A  +PD  Q + +++DEDTSNRSSSGSAISN ESCA FSSADAS
Sbjct: 75  EVKLLKRKQKSDNMVVASGVPDYNQGFRKMIDEDTSNRSSSGSAISNSESCAQFSSADAS 134

Query: 167 DLTG 171
           DLTG
Sbjct: 135 DLTG 138

[Close]
BLAST of Carg25081 vs. TrEMBL
Match: tr|A0A2I4F0C1|A0A2I4F0C1_9ROSI (GATA transcription factor 26-like isoform X2 OS=Juglans regia OX=51240 GN=LOC108994378 PE=4 SV=1)

HSP 1 Score: 199.5 bits (506), Expect = 6.0e-48
Identity = 97/124 (78.23%), Postives = 107/124 (86.29%), Query Frame = 0 

Query: 47  TPLWRNGPPDKPVLCNACGSRWRTKGTLTNYTPLHARTVPDEYEDHRASRVKSISINKNK 106
           TPLWRNGPP+KPVLCNACGSRWRTKGTL NYTPLHAR  PDEYEDHR SR+KSISINKNK
Sbjct: 15  TPLWRNGPPEKPVLCNACGSRWRTKGTLANYTPLHARAEPDEYEDHRVSRMKSISINKNK 74

Query: 107 EVKLLKRKLQQADGSIAWMLPDQGQDYHRVVDEDTSNRSSSGSAISNPESCAHFSSADAS 166
           EVKLLKRK +  +  +A  +PD  Q + +++DEDTSNRSSSGSAISN ESCA FSSADAS
Sbjct: 75  EVKLLKRKQKSDNMVVASGVPDYNQGFRKMIDEDTSNRSSSGSAISNSESCAQFSSADAS 134

Query: 167 DLTG 171
           DLTG
Sbjct: 135 DLTG 138

[Close]
BLAST of Carg25081 vs. TrEMBL
Match: tr|A0A2I4F0B9|A0A2I4F0B9_9ROSI (GATA transcription factor 26-like isoform X1 OS=Juglans regia OX=51240 GN=LOC108994378 PE=4 SV=1)

HSP 1 Score: 199.5 bits (506), Expect = 6.0e-48
Identity = 97/124 (78.23%), Postives = 107/124 (86.29%), Query Frame = 0 

Query: 47  TPLWRNGPPDKPVLCNACGSRWRTKGTLTNYTPLHARTVPDEYEDHRASRVKSISINKNK 106
           TPLWRNGPP+KPVLCNACGSRWRTKGTL NYTPLHAR  PDEYEDHR SR+KSISINKNK
Sbjct: 15  TPLWRNGPPEKPVLCNACGSRWRTKGTLANYTPLHARAEPDEYEDHRVSRMKSISINKNK 74

Query: 107 EVKLLKRKLQQADGSIAWMLPDQGQDYHRVVDEDTSNRSSSGSAISNPESCAHFSSADAS 166
           EVKLLKRK +  +  +A  +PD  Q + +++DEDTSNRSSSGSAISN ESCA FSSADAS
Sbjct: 75  EVKLLKRKQKSDNMVVASGVPDYNQGFRKMIDEDTSNRSSSGSAISNSESCAQFSSADAS 134

Query: 167 DLTG 171
           DLTG
Sbjct: 135 DLTG 138

The following BLAST results are available for this feature:
BLAST of Carg25081 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_022971837.11.8e-6499.19GATA transcription factor 26-like [Cucurbita maxima][more]
XP_023554174.13.1e-6499.19GATA transcription factor 26-like [Cucurbita pepo subsp. pepo][more]
XP_022931794.19.0e-6498.39GATA transcription factor 26-like [Cucurbita moschata][more]
XP_004148382.11.2e-6093.55PREDICTED: GATA transcription factor 26-like [Cucumis sativus][more]
KGN60460.11.2e-6093.55hypothetical protein Csa_3G912920 [Cucumis sativus][more]
BLAST of Carg25081 vs. TAIR10
Match NameE-valueIdentityDescription
AT4G17570.29.3e-3966.41GATA transcription factor 26[more]
AT5G47140.11.7e-2754.40GATA transcription factor 27[more]
AT3G21175.18.0e-0632.47ZIM-like 1[more]
AT3G45170.14.0e-0557.58GATA transcription factor 14[more]
AT3G51080.16.8e-0537.70GATA transcription factor 6[more]
BLAST of Carg25081 vs. Swiss-Prot
Match NameE-valueIdentityDescription
sp|Q8W4H1|GAT26_ARATH1.0e-3465.85GATA transcription factor 26 OS=Arabidopsis thaliana OX=3702 GN=GATA26 PE=2 SV=1[more]
sp|Q5PP38|GAT27_ARATH3.0e-2654.40GATA transcription factor 27 OS=Arabidopsis thaliana OX=3702 GN=GATA27 PE=2 SV=1[more]
sp|Q8GXL7|GAT24_ARATH1.4e-0432.47GATA transcription factor 24 OS=Arabidopsis thaliana OX=3702 GN=GATA24 PE=1 SV=2[more]
sp|Q9M1U2|GAT14_ARATH7.1e-0457.58GATA transcription factor 14 OS=Arabidopsis thaliana OX=3702 GN=GATA14 PE=2 SV=1[more]
sp|Q550D5|GTAA_DICDI7.1e-0462.07Transcription factor stalky OS=Dictyostelium discoideum OX=44689 GN=stkA PE=1 SV... [more]
BLAST of Carg25081 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A0A0LEK2|A0A0A0LEK2_CUCSA8.0e-6193.55Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G912920 PE=4 SV=1[more]
tr|A0A1S3CQA3|A0A1S3CQA3_CUCME1.5e-5991.13GATA transcription factor 26-like OS=Cucumis melo OX=3656 GN=LOC103503476 PE=4 S... [more]
tr|A0A2I4F0C5|A0A2I4F0C5_9ROSI6.0e-4878.23GATA transcription factor 26-like isoform X6 OS=Juglans regia OX=51240 GN=LOC108... [more]
tr|A0A2I4F0C1|A0A2I4F0C1_9ROSI6.0e-4878.23GATA transcription factor 26-like isoform X2 OS=Juglans regia OX=51240 GN=LOC108... [more]
tr|A0A2I4F0B9|A0A2I4F0B9_9ROSI6.0e-4878.23GATA transcription factor 26-like isoform X1 OS=Juglans regia OX=51240 GN=LOC108... [more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0003700transcription factor activity, sequence-specific DNA binding
GO:0043565sequence-specific DNA binding
GO:0008270zinc ion binding
Vocabulary: Biological Process
TermDefinition
GO:0006355regulation of transcription, DNA-templated
Vocabulary: INTERPRO
TermDefinition
IPR039355Transcription_factor_GATA
IPR013088Znf_NHR/GATA
IPR000679Znf_GATA
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006355 regulation of transcription, DNA-templated
cellular_component GO:0005667 transcription factor complex
molecular_function GO:0043565 sequence-specific DNA binding
molecular_function GO:0003700 transcription factor activity, sequence-specific DNA binding
molecular_function GO:0008270 zinc ion binding
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Carg25081-RACarg25081-RAmRNA


InterPro
Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000679Zinc finger, GATA-typeSMARTSM00401GATA_3coord: 31..87
e-value: 0.0054
score: 12.6
IPR000679Zinc finger, GATA-typePFAMPF00320GATAcoord: 47..73
e-value: 2.3E-10
score: 39.8
IPR000679Zinc finger, GATA-typeCDDcd00202ZnF_GATAcoord: 47..86
e-value: 4.41004E-11
score: 53.9158
IPR013088Zinc finger, NHR/GATA-typeGENE3DG3DSA:3.30.50.10coord: 43..81
e-value: 1.9E-6
score: 29.1
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 142..170
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 139..170
NoneNo IPR availablePANTHERPTHR10071:SF290SUBFAMILY NOT NAMEDcoord: 47..170
NoneNo IPR availableSUPERFAMILYSSF57716Glucocorticoid receptor-like (DNA-binding domain)coord: 46..78
IPR039355Transcription factor GATAPANTHERPTHR10071TRANSCRIPTION FACTOR GATA GATA BINDING FACTORcoord: 47..170