Carg25033 (gene) Silver-seed gourd | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Carg25033
Type	gene
Organism	Cucurbita argyrosperma (Silver-seed gourd)
Description	protein SRC2-like
Location	Cucurbita_argyrosperma_scaffold_176 : 308189 .. 308884 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGATGTCCGGCAACTGGAAATCAGAATCATCAAAGCCAATGATCTCAAAGACGTCAATCTCATGACAAAAATGGACGTTTTCGCCCTCGTTTCGATCTCCGGTGACCAATTAAACAACCCGCAACAGAAGACCGATGTCGACAAAGACGGCGGCACCAGCCCCAAGTGGAATTTTCATACGCAATTCACCGTCGACGACGCCGCCGTTCAGGAGAATCGCGTCACCCTTAAGATCAAGCTTATTTCTAATCGGAGTTTGGGGAATAAAGAAATTGGGGTTGTTTATGTTCAGATTAAGGAGATGTTTGATGGTGGCGGCGCCGGGGAAGAGGAGAAATCCGGTAATTATAGTGTCCGGTTGTCGAATGGGACTGTGAAGGGCAATTTGGACTTGGCTTATAAATTTGGAGAAAAATATACAATTGAACGGCCGCCGTCACCGCCGCCGCCGCCAATGGAGGAGCCACGCAACATGAACGGGGTGGACACGCCGCAGGTTATGGCTTATCCGTCTACATTTCCTGACCTTAGCTCTACATATTCACCACAAGCGGAAGCGTACCGCCCACCACACGGTGGATACCCCAACCCTCTGCCGCCGGGGGCGTATCCACCACCGCACGTGGGATATAGATATGGTGGTTACCAGCCACCGCCAACGGGGTATGGGTACCCGCCAATGCAACGGCTTTAA

mRNA sequence

ATGGATGTCCGGCAACTGGAAATCAGAATCATCAAAGCCAATGATCTCAAAGACGTCAATCTCATGACAAAAATGGACGTTTTCGCCCTCGTTTCGATCTCCGGTGACCAATTAAACAACCCGCAACAGAAGACCGATGTCGACAAAGACGGCGGCACCAGCCCCAAGTGGAATTTTCATACGCAATTCACCGTCGACGACGCCGCCGTTCAGGAGAATCGCGTCACCCTTAAGATCAAGCTTATTTCTAATCGGAGTTTGGGGAATAAAGAAATTGGGGTTGTTTATGTTCAGATTAAGGAGATGTTTGATGGTGGCGGCGCCGGGGAAGAGGAGAAATCCGGTAATTATAGTGTCCGGTTGTCGAATGGGACTGTGAAGGGCAATTTGGACTTGGCTTATAAATTTGGAGAAAAATATACAATTGAACGGCCGCCGTCACCGCCGCCGCCGCCAATGGAGGAGCCACGCAACATGAACGGGGTGGACACGCCGCAGGTTATGGCTTATCCGTCTACATTTCCTGACCTTAGCTCTACATATTCACCACAAGCGGAAGCGTACCGCCCACCACACGGTGGATACCCCAACCCTCTGCCGCCGGGGGCGTATCCACCACCGCACGTGGGATATAGATATGGTGGTTACCAGCCACCGCCAACGGGGTATGGGTACCCGCCAATGCAACGGCTTTAA

Coding sequence (CDS)

ATGGATGTCCGGCAACTGGAAATCAGAATCATCAAAGCCAATGATCTCAAAGACGTCAATCTCATGACAAAAATGGACGTTTTCGCCCTCGTTTCGATCTCCGGTGACCAATTAAACAACCCGCAACAGAAGACCGATGTCGACAAAGACGGCGGCACCAGCCCCAAGTGGAATTTTCATACGCAATTCACCGTCGACGACGCCGCCGTTCAGGAGAATCGCGTCACCCTTAAGATCAAGCTTATTTCTAATCGGAGTTTGGGGAATAAAGAAATTGGGGTTGTTTATGTTCAGATTAAGGAGATGTTTGATGGTGGCGGCGCCGGGGAAGAGGAGAAATCCGGTAATTATAGTGTCCGGTTGTCGAATGGGACTGTGAAGGGCAATTTGGACTTGGCTTATAAATTTGGAGAAAAATATACAATTGAACGGCCGCCGTCACCGCCGCCGCCGCCAATGGAGGAGCCACGCAACATGAACGGGGTGGACACGCCGCAGGTTATGGCTTATCCGTCTACATTTCCTGACCTTAGCTCTACATATTCACCACAAGCGGAAGCGTACCGCCCACCACACGGTGGATACCCCAACCCTCTGCCGCCGGGGGCGTATCCACCACCGCACGTGGGATATAGATATGGTGGTTACCAGCCACCGCCAACGGGGTATGGGTACCCGCCAATGCAACGGCTTTAA

Protein sequence

MDVRQLEIRIIKANDLKDVNLMTKMDVFALVSISGDQLNNPQQKTDVDKDGGTSPKWNFHTQFTVDDAAVQENRVTLKIKLISNRSLGNKEIGVVYVQIKEMFDGGGAGEEEKSGNYSVRLSNGTVKGNLDLAYKFGEKYTIERPPSPPPPPMEEPRNMNGVDTPQVMAYPSTFPDLSSTYSPQAEAYRPPHGGYPNPLPPGAYPPPHVGYRYGGYQPPPTGYGYPPMQRL

Homology

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BLAST of Carg25033 vs. NCBI nr
Match: XP_022933510.1 (protein SRC2 homolog [Cucurbita moschata])

HSP 1 Score: 382.5 bits (981), Expect = 1.0e-102
Identity = 222/231 (96.10%), Postives = 223/231 (96.54%), Query Frame = 0


Query: 1   MDVRQLEIRIIKANDLKDVNLMTKMDVFALVSISGDQLNNPQQKTDVDKDGGTSPKWNFH 60
           M+VRQLEIRIIKANDLKDVNLMTKMDVFALVSISGDQLNNPQQKTDVDKDGGTSPKWNFH
Sbjct: 1   MEVRQLEIRIIKANDLKDVNLMTKMDVFALVSISGDQLNNPQQKTDVDKDGGTSPKWNFH 60

Query: 61  TQFTVDDAAVQENRVTLKIKLISNRSLGNKEIGVVYVQIKEMFDGGGAGEEEKSGNYSVR 120
           TQFTVDDAAVQENRVTLKIKLISNRSLGNKEIGVVYVQIKEMFDGGGAGEEEKSGNYSVR
Sbjct: 61  TQFTVDDAAVQENRVTLKIKLISNRSLGNKEIGVVYVQIKEMFDGGGAGEEEKSGNYSVR 120

Query: 121 LSNGTVKGNLDLAYKFGEKYTIERPXXXXXXXXXEPRNMNGVDTPQVMAYPSTFPDLSST 180
           LSNGTVKGNLDLAYKFGEKYTIERPXXXXXXXXX   NMNGVDTPQVMAYPSTFPDLSST
Sbjct: 121 LSNGTVKGNLDLAYKFGEKYTIERPXXXXXXXXXXXXNMNGVDTPQVMAYPSTFPDLSST 180

Query: 181 YSPQAEAYRPPHGGYPNPLPPGAXXXXXVGYRYXXXXXXXXXXXXPPMQRL 232
           YSP AEAYRPPHGGYPNPLPPG XXXXX   RYXXXXXXXXXXXXPPMQRL
Sbjct: 181 YSPLAEAYRPPHGGYPNPLPPGXXXXXXXXXRYXXXXXXXXXXXXPPMQRL 231

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BLAST of Carg25033 vs. NCBI nr
Match: XP_022969944.1 (protein SRC2-like [Cucurbita maxima])

HSP 1 Score: 366.3 bits (939), Expect = 7.6e-98
Identity = 214/231 (92.64%), Postives = 218/231 (94.37%), Query Frame = 0


Query: 1   MDVRQLEIRIIKANDLKDVNLMTKMDVFALVSISGDQLNNPQQKTDVDKDGGTSPKWNFH 60
           M+VRQLEIRIIKANDLKDVNLMTKMDVFAL+SISGDQLNNP QKTDVDKDGGTSPKWNFH
Sbjct: 1   MEVRQLEIRIIKANDLKDVNLMTKMDVFALLSISGDQLNNPHQKTDVDKDGGTSPKWNFH 60

Query: 61  TQFTVDDAAVQENRVTLKIKLISNRSLGNKEIGVVYVQIKEMFDGGGAGEEEKSGNYSVR 120
           TQFTVDDAAVQENRVTLKIKLISNRSLGNKEIGVVYVQIKEMFDGGGAGEEEKSG+YSVR
Sbjct: 61  TQFTVDDAAVQENRVTLKIKLISNRSLGNKEIGVVYVQIKEMFDGGGAGEEEKSGSYSVR 120

Query: 121 LSNGTVKGNLDLAYKFGEKYTIERPXXXXXXXXXEPRNMNGVDTPQVMAYPSTFPDLSST 180
           LSNGTVKGNLDLAYKFGEKY IERPXXXXXXXXX PRN NGV+ PQVMAYPSTFPDLSST
Sbjct: 121 LSNGTVKGNLDLAYKFGEKYKIERPXXXXXXXXXXPRNKNGVEAPQVMAYPSTFPDLSST 180

Query: 181 YSPQAEAYRPPHGGYPNPLPPGAXXXXXVGYRYXXXXXXXXXXXXPPMQRL 232
           YSP AEAYRPPHGGYPNPL    XXXXX   RYXXXXXXXXXXXXPPMQRL
Sbjct: 181 YSPPAEAYRPPHGGYPNPLXXXXXXXXXXXXRYXXXXXXXXXXXXPPMQRL 231

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BLAST of Carg25033 vs. NCBI nr
Match: XP_023530282.1 (protein SRC2 homolog [Cucurbita pepo subsp. pepo])

HSP 1 Score: 364.0 bits (933), Expect = 3.8e-97
Identity = 216/233 (92.70%), Postives = 220/233 (94.42%), Query Frame = 0


Query: 1   MDVRQLEIRIIKANDLKDVNLMTKMDVFALVSISGDQLNNPQQKTDVDKDGGTSPKWNFH 60
           MDVRQLEIRIIKA+DLKDVNLMTKMDVFALVSISGDQLNNPQQKTDVDKDGGTSPKWNFH
Sbjct: 1   MDVRQLEIRIIKASDLKDVNLMTKMDVFALVSISGDQLNNPQQKTDVDKDGGTSPKWNFH 60

Query: 61  TQFTVDDAAVQENRVTLKIKLISNRSLGNKEIGVVYVQIKEMFDGGGAGEEEKSGNYSVR 120
           TQFTVDDAAVQENRVTLKIKLISNRSLGNKEIGVVYVQIKEMFDGGGAGEEEKSG+YSVR
Sbjct: 61  TQFTVDDAAVQENRVTLKIKLISNRSLGNKEIGVVYVQIKEMFDGGGAGEEEKSGSYSVR 120

Query: 121 LSNGTVKGNLDLAYKFGEKYTIERP--XXXXXXXXXEPRNMNGVDTPQVMAYPSTFPDLS 180
           LSNGTVKGNLDLAYKFGEKY IERP  XXXXXXXXX PRNMNGVD+PQVMAYPSTFPD+S
Sbjct: 121 LSNGTVKGNLDLAYKFGEKYKIERPXXXXXXXXXXXXPRNMNGVDSPQVMAYPSTFPDVS 180

Query: 181 STYSPQAEAYRPPHGGYPNPLPPGAXXXXXVGYRYXXXXXXXXXXXXPPMQRL 232
           STYSP AEAYRPPHGGYPNPL    XXXXX   RYXXXXXXXXXXXX PMQRL
Sbjct: 181 STYSPPAEAYRPPHGGYPNPLXXXXXXXXXXXXRYXXXXXXXXXXXXXPMQRL 233

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BLAST of Carg25033 vs. NCBI nr
Match: XP_022146019.1 (protein SRC2-like [Momordica charantia])

HSP 1 Score: 231.5 bits (589), Expect = 2.9e-57
Identity = 132/190 (69.47%), Postives = 151/190 (79.47%), Query Frame = 0


Query: 1   MDVRQLEIRIIKANDLKDVNLMTKMDVFALVSISGDQLNNPQQKTDVDKDGGTSPKWNFH 60
           M+VR LEIRI+KA+DLKDVNL++KMDV+A+VSISGDQLNNP+ KT VDKDGGTSPKWNF 
Sbjct: 1   MEVRPLEIRILKAHDLKDVNLISKMDVYAVVSISGDQLNNPKLKTAVDKDGGTSPKWNFP 60

Query: 61  TQFTVDDAAVQENRVTLKIKLISNRSLGNKEIGVVYVQIKEMFDG-GGAGEE-------- 120
            +F VDDA+V ENR+TL IKL+SNRSLG++EIGVV+VQIKE+FD  GG G          
Sbjct: 61  MKFAVDDASVMENRLTLNIKLMSNRSLGDREIGVVHVQIKELFDSCGGDGXXXXXXXXXG 120

Query: 121 EKSGNYSVRLSNGTVKGNLDLAYKFGEKYTIERPXXXXXXXXXEPRNMNGVDTPQVMAYP 180
           EKSG+YSVRLSNG VKG LDLAYKFG+KY +E     XXXXXX   N  GVD P VMAYP
Sbjct: 121 EKSGSYSVRLSNGKVKGTLDLAYKFGDKYEVE-----XXXXXXXXXNEKGVDAPPVMAYP 180

Query: 181 STFPDLSSTY 182
           S FP  SSTY
Sbjct: 181 SGFPGSSSTY 185

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BLAST of Carg25033 vs. NCBI nr
Match: XP_022146005.1 (protein SRC2-like [Momordica charantia])

HSP 1 Score: 214.5 bits (545), Expect = 3.7e-52
Identity = 115/177 (64.97%), Postives = 132/177 (74.58%), Query Frame = 0


Query: 1   MDVRQLEIRIIKANDLKDVNLMTKMDVFALVSISGDQLNNPQQKTDVDKDGGTSPKWNFH 60
           M+VR LEIRIIKA+DLKDVNL++KMDV+A+VSISGDQLNNP+ KT VDKDGGTSPKWNF 
Sbjct: 1   MEVRPLEIRIIKAHDLKDVNLLSKMDVYAVVSISGDQLNNPKLKTAVDKDGGTSPKWNFS 60

Query: 61  TQFTVDDAAVQENRVTLKIKLISNRSLGNKEIGVVYVQIKEMFDG--GGAGEEEKSGNYS 120
            +F V++AAV ENR+TLKIKLISNRSLG++EIGVVYVQIKE+FD            G+YS
Sbjct: 61  MKFAVEEAAVLENRLTLKIKLISNRSLGDREIGVVYVQIKELFDNXXXXXXXXXXXGSYS 120

Query: 121 VRLSNGTVKGNLDLAYKFGEKYTIERPXXXXXXXXXEPRNMNGVDTPQVMAYPSTFP 176
           VRLSNG  KG LDLAYKFGEKY  E P         +       D P  MAYPS +P
Sbjct: 121 VRLSNGKAKGTLDLAYKFGEKYKFEPPPPQLPPSSVK----TAADAPXXMAYPSAYP 173

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BLAST of Carg25033 vs. TAIR10
Match: AT1G09070.1 (soybean gene regulated by cold-2)

HSP 1 Score: 134.8 bits (338), Expect = 6.7e-32
Identity = 71/142 (50.00%), Postives = 100/142 (70.42%), Query Frame = 0


Query: 1   MDVRQLEIRIIKANDLKDVNLMTKMDVFALVSISGDQLNNPQQKTDVDKDGGTSPKWNFH 60
           M+ R L++ II A DLKDV L+ K D++A+VSI+GD     +QKT VDKD GT PKW   
Sbjct: 1   MECRSLDLTIISAEDLKDVQLIGKQDLYAVVSINGDA--RTKQKTKVDKDCGTKPKWKHQ 60

Query: 61  TQFTVDDAAVQENRVTLKIKLISNRSL-GNKEIGVVYVQIKEMFDGGGAGEEEKSGNYSV 120
            + TVDDAA ++NR+TL  +++++R + G+K +G V V +KE+ D    G+EEK+  Y+V
Sbjct: 61  MKLTVDDAAARDNRLTLVFEIVADRPIAGDKPVGEVSVPVKELLD-QNKGDEEKTVTYAV 120

Query: 121 RLSNGTVKGNLDLAYKFGEKYT 142
           RL NG  KG+L  ++KFGEKYT
Sbjct: 121 RLPNGKAKGSLKFSFKFGEKYT 139

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BLAST of Carg25033 vs. TAIR10
Match: AT3G16510.1 (Calcium-dependent lipid-binding (CaLB domain) family protein)

HSP 1 Score: 97.1 bits (240), Expect = 1.6e-20
Identity = 52/139 (37.41%), Postives = 81/139 (58.27%), Query Frame = 0


Query: 6   LEIRIIKANDLKDVNLMTKMDVFALVSISG-DQLNNPQQKTDVDKDGGTSPKWNFHTQFT 65
           LE+ +  A DL++VNL+TKMDV+A+V I+G D   N ++KT +D+ G + P WN   +F+
Sbjct: 6   LELNVYSAKDLENVNLITKMDVYAVVWITGDDSRKNHKEKTPIDRTGESEPTWNHTVKFS 65

Query: 66  VDDAAVQENRVTLKIKLISNRSLGNKEIGVVYVQIKEMFDGGGAGEEEKSG-------NY 125
           VD     E R+TL +KL+ +R  G+K++G V V + E+  G  +      G        Y
Sbjct: 66  VDQRLAHEGRLTLVVKLVCDRIFGDKDLGEVQVPVLELLHGSSSPSSNGDGQGMMRFVTY 125

Query: 126 SVRLSNGTVKGNLDLAYKF 137
            VR   G  +G+L  +Y+F
Sbjct: 126 QVRTPFGKGQGSLTFSYRF 144

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BLAST of Carg25033 vs. TAIR10
Match: AT4G15755.1 (Calcium-dependent lipid-binding (CaLB domain) family protein)

HSP 1 Score: 96.7 bits (239), Expect = 2.0e-20
Identity = 55/139 (39.57%), Postives = 86/139 (61.87%), Query Frame = 0


Query: 6   LEIRIIKANDLKDVNLMTKMDVFALVSISGDQLNNPQQ-KTDVDKDGGTSPKWNFHTQFT 65
           LE+ I  A +L +VNL+TKM+VF  ++I+G+     Q+ KT VD+ GG++P WN   +F+
Sbjct: 6   LELNINSARNLLNVNLITKMNVFTAITINGENTRKKQKAKTTVDRYGGSNPTWNQTIKFS 65

Query: 66  VDDAAVQENRVTLKIKLISNRSLGNKEIGVVYVQIKEM-------FDGGGAGEEEKSGNY 125
           VD+ + +    +L +++IS R LGNKEIG V + + E+       F+G G   E K  +Y
Sbjct: 66  VDERSARGGHSSLVMRVISRRVLGNKEIGRVNIPLLELLNATTPSFNGDGNDHEMKLMSY 125

Query: 126 SVRLSNGTVKGNLDLAYKF 137
            VR S+G   G+L  +Y+F
Sbjct: 126 QVRTSSGKRSGSLSFSYRF 144

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BLAST of Carg25033 vs. TAIR10
Match: AT3G62780.1 (Calcium-dependent lipid-binding (CaLB domain) family protein)

HSP 1 Score: 77.4 bits (189), Expect = 1.3e-14
Identity = 52/140 (37.14%), Postives = 76/140 (54.29%), Query Frame = 0


Query: 1   MDVRQLEIRIIKANDLKDVNLMTKMDVFALVSISGDQ--LNNPQQKTDVDKDGGTSPKW- 60
           M  R LEI +  A  LK V   +KMDVF  V +SGD    ++ +Q+T   +DGGTSPKW 
Sbjct: 1   MGTRSLEINVTSAKGLKKV---SKMDVFVAVKLSGDPKCSDHREQRTQAARDGGTSPKWS 60

Query: 61  NFHTQFTVDDAAVQENRVTLKIKLISNRSLG-NKEIGVVYVQIKEMFDGGGAGEEEKSGN 120
           N   +F +D    + NR+ +  K+   +  G +K+IG V+VQ+KE+ D  G    +K+G 
Sbjct: 61  NDVMKFILDQNLAEANRLVITFKIKCEQRGGVDKDIGEVHVQVKELLDHLG---NDKTGQ 120

Query: 121 YSVRLSNGTVKGNLDLAYKF 137
             V    G  K ++   Y F
Sbjct: 121 RYVTYQIGKSKADISFTYSF 134

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BLAST of Carg25033 vs. TAIR10
Match: AT4G15740.1 (Calcium-dependent lipid-binding (CaLB domain) family protein)

HSP 1 Score: 70.9 bits (172), Expect = 1.2e-12
Identity = 43/146 (29.45%), Postives = 79/146 (54.11%), Query Frame = 0


Query: 1   MDVRQLEIRIIKANDLKDVNLMTKMDVFALVSISGDQLNNPQ-QKTDVDKDGGTSPKWNF 60
           M+   LE++I+ A+D+  ++   KMDV+A+VSI+GD     Q  KT +D DGG++P WN 
Sbjct: 36  MENPTLELKIVSASDVNHIDATDKMDVYAVVSINGDTTQQKQAAKTPIDYDGGSNPTWNH 95

Query: 61  HTQFTVDDAAVQENRVTLKIKLISNRSLGNKE--IGVVYVQIKEMFDG-------GGAGE 120
             +F+V++    E  +T+ +KL S    G+ +  +G V V ++++           G   
Sbjct: 96  TVKFSVNEREANEGLLTITVKLFSYWLEGDNDLYLGEVNVSVQDLLASNPIPPFTNGNIN 155

Query: 121 EEKSGNYSVRLSNGTVKGNLDLAYKF 137
           + KS    ++ +  +    + L+Y+F
Sbjct: 156 KMKSMTCPIKATEKSTNTTVSLSYRF 181

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BLAST of Carg25033 vs. Swiss-Prot
Match: sp|O04023|SRC2_ARATH (Protein SRC2 homolog OS=Arabidopsis thaliana OX=3702 GN=SRC2 PE=1 SV=1)

HSP 1 Score: 134.8 bits (338), Expect = 1.2e-30
Identity = 71/142 (50.00%), Postives = 100/142 (70.42%), Query Frame = 0


Query: 1   MDVRQLEIRIIKANDLKDVNLMTKMDVFALVSISGDQLNNPQQKTDVDKDGGTSPKWNFH 60
           M+ R L++ II A DLKDV L+ K D++A+VSI+GD     +QKT VDKD GT PKW   
Sbjct: 1   MECRSLDLTIISAEDLKDVQLIGKQDLYAVVSINGDA--RTKQKTKVDKDCGTKPKWKHQ 60

Query: 61  TQFTVDDAAVQENRVTLKIKLISNRSL-GNKEIGVVYVQIKEMFDGGGAGEEEKSGNYSV 120
            + TVDDAA ++NR+TL  +++++R + G+K +G V V +KE+ D    G+EEK+  Y+V
Sbjct: 61  MKLTVDDAAARDNRLTLVFEIVADRPIAGDKPVGEVSVPVKELLD-QNKGDEEKTVTYAV 120

Query: 121 RLSNGTVKGNLDLAYKFGEKYT 142
           RL NG  KG+L  ++KFGEKYT
Sbjct: 121 RLPNGKAKGSLKFSFKFGEKYT 139

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BLAST of Carg25033 vs. Swiss-Prot
Match: sp|O04133|SRC2_SOYBN (Protein SRC2 OS=Glycine max OX=3847 GN=SRC2 PE=2 SV=1)

HSP 1 Score: 124.8 bits (312), Expect = 1.3e-27
Identity = 80/211 (37.91%), Postives = 117/211 (55.45%), Query Frame = 0


Query: 1   MDVRQLEIRIIKANDLKDVNLMTKMDVFALVSISGDQLNNPQQKTDVDKDGGTSPKWNFH 60
           M+ R LE+ II A D+K+VNL +KMDV+A VS+SGD L+     T V KD G++P WN+ 
Sbjct: 3   MEYRTLELNIISAKDIKNVNLFSKMDVYAAVSLSGDPLHPQGATTHVHKDAGSNPTWNYP 62

Query: 61  TQFTVDDAAVQENRVTLKIKLISNRSLGNKEIGVVYVQIKEMFDGGGAGEEEKSGNYSVR 120
            +F+V+++  +ENR++L+IKLIS+R+LG+  IG V+V ++E+ D  G     +  +Y V 
Sbjct: 63  VKFSVNESLAKENRLSLEIKLISDRTLGDTVIGTVHVPLRELLDNPGDDSSFRQVSYQVM 122

Query: 121 LSNGTVKGNLDLAYKFGEKYTIERPXXXXXXXXXEPRNMNGVDTPQVMAYPSTFPDLSST 180
             +   KG+L+ +YKFGE   +  P          P+       P VMAYP      SS 
Sbjct: 123 KQSRKSKGSLNFSYKFGEH--VPAP------AAKTPKAAKAGQEP-VMAYPPAGAGSSSM 182

Query: 181 YSPQAEAYRPPHGGYPNPLPPGAXXXXXVGY 212
                     P+ G P+P PP        GY
Sbjct: 183 ----------PY-GTPHPPPPQQYAATGYGY 193

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BLAST of Carg25033 vs. TrEMBL
Match: tr|A0A0A0LW10|A0A0A0LW10_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G569470 PE=4 SV=1)

HSP 1 Score: 214.2 bits (544), Expect = 3.2e-52
Identity = 118/183 (64.48%), Postives = 138/183 (75.41%), Query Frame = 0


Query: 1   MDVRQLEIRIIKANDLKDVNLMTKMDVFALVSISGDQLNNPQQKTDVDKDGGTSPKWNFH 60
           M+VR LEIRIIKA+DLKDVNL+TKMDV+A+VSISGD LNN +QKT VDKD G +P W+F 
Sbjct: 1   MEVRPLEIRIIKAHDLKDVNLITKMDVYAVVSISGDHLNNQKQKTTVDKDAGPNPSWDFP 60

Query: 61  TQFTVDDAAVQENRVTLKIKLISNRSLGNKEIGVVYVQIKEMFDG-----GG---AGEEE 120
             FTVDDAAVQ+NR+TLKIKL+S+RSLG++EIGVVYVQIKE+FD      GG   AG E 
Sbjct: 61  MTFTVDDAAVQDNRLTLKIKLLSDRSLGDREIGVVYVQIKELFDSIVHREGGVDDAGNEV 120

Query: 121 KSGNYSVRLSNGTVKGNLDLAYKFGEKYTIERPXXXXXXXXXEPRNMNGVDTPQVMAYPS 176
           K G++SVRLSNG  KG LDLAYKFGEK+ IE           E      ++ P VMAYPS
Sbjct: 121 KFGSFSVRLSNGKAKGTLDLAYKFGEKHNIE-SLPPLPPHTTEQYAQKEMEPPPVMAYPS 180

[Close]

BLAST of Carg25033 vs. TrEMBL
Match: tr|A0A1S3BPP9|A0A1S3BPP9_CUCME (protein SRC2-like OS=Cucumis melo OX=3656 GN=LOC103492167 PE=4 SV=1)

HSP 1 Score: 213.8 bits (543), Expect = 4.2e-52
Identity = 117/183 (63.93%), Postives = 136/183 (74.32%), Query Frame = 0


Query: 1   MDVRQLEIRIIKANDLKDVNLMTKMDVFALVSISGDQLNNPQQKTDVDKDGGTSPKWNFH 60
           M+VR LEIRIIKANDL+ VNL+ KMDV+A+VSISGD LNN +QKT VDKD G +P WNF 
Sbjct: 1   MEVRSLEIRIIKANDLRVVNLINKMDVYAVVSISGDHLNNQKQKTTVDKDAGPNPNWNFP 60

Query: 61  TQFTVDDAAVQENRVTLKIKLISNRSLGNKEIGVVYVQIKEMFD------GGG--AGEEE 120
             FTVDDAAV +NR+TLKIKL+S+RSLG++EIGVVYVQIKE+FD      GGG   G +E
Sbjct: 61  MSFTVDDAAVHDNRLTLKIKLLSDRSLGDREIGVVYVQIKELFDSIVQREGGGDDTGNKE 120

Query: 121 KSGNYSVRLSNGTVKGNLDLAYKFGEKYTIERPXXXXXXXXXEPRNMNGVDTPQVMAYPS 176
           K G+YSVRLSNG  KG LDLAYKFGEKY +E           E  +  G+  P VMAY S
Sbjct: 121 KFGSYSVRLSNGKQKGTLDLAYKFGEKYNVE-SLPPLPPHSAEQYDEKGMKAPPVMAYRS 180

[Close]

BLAST of Carg25033 vs. TrEMBL
Match: tr|A0A2I4GPS8|A0A2I4GPS8_9ROSI (protein SRC2 homolog OS=Juglans regia OX=51240 GN=LOC109009750 PE=4 SV=1)

HSP 1 Score: 166.4 bits (420), Expect = 7.6e-38
Identity = 96/200 (48.00%), Postives = 123/200 (61.50%), Query Frame = 0


Query: 1   MDVRQLEIRIIKANDLKDVNLMTKMDVFALVSISG-DQLNNPQQKTDVDKDGGTSPKWNF 60
           M+ R L+I I  A DLKDVNL +KMDV+A+V I G   L +  QKT  DKD GTSPKWNF
Sbjct: 1   MECRPLDIVIESAKDLKDVNLFSKMDVYAVVKIEGVYNLKSSTQKTPTDKDCGTSPKWNF 60

Query: 61  HTQFTVDDAAVQENRVTLKIKLISNRSLGNKEIGVVYVQIKEMFDGGGAGEEEKSGNYSV 120
           H +FT+DD A  +NR+TL IK+ S+R+LG++EIG V+V IKE+ DG G  +E K   YSV
Sbjct: 61  HVKFTIDDDAANQNRLTLVIKIKSDRTLGDREIGEVHVPIKELLDGFGVAKEAKHATYSV 120

Query: 121 RLSNGTVKGNLDLAYKFGEKYTIERPXXXXXXXXXEPRNMNGVDTPQVMAYPSTFPDLSS 180
           R  +G  KG LD++YKFGEK+T                 +       VMAYP+ +    +
Sbjct: 121 RTPSGKTKGTLDISYKFGEKFTAP--------------EIKSKQAEPVMAYPAGY----A 180

Query: 181 TYSPQAEAYRPPHGGYPNPL 200
             S  A AY PP G YP P+
Sbjct: 181 AGSSGAAAY-PPPGAYPQPM 181

[Close]

BLAST of Carg25033 vs. TrEMBL
Match: tr|M5WC75|M5WC75_PRUPE (Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_6G322500 PE=4 SV=1)

HSP 1 Score: 159.8 bits (403), Expect = 7.1e-36
Identity = 92/187 (49.20%), Postives = 121/187 (64.71%), Query Frame = 0


Query: 1   MDVRQLEIRIIKANDLKDVNLMTKMDVFALVSISGDQLNNPQ-QKTDVDKDGGTSPKW-N 60
           M+ R LEI I+ A+DLKDVN+ +KMDV+A VS+SGD  N  Q  KT V KDGGT+PKW N
Sbjct: 1   MECRPLEITIVSASDLKDVNMFSKMDVYAAVSVSGDPRNKKQTTKTPVAKDGGTNPKWNN 60

Query: 61  FHTQFTVDDAAVQENRVTLKIKLISNRSLGNKEIGVVYVQIKEMFDGGGAGEEEKSG--- 120
           +  +FT+DDAA+  NR+TL IKL+S RSLG+ +IG V + +KE+FD  G G+++K     
Sbjct: 61  YSIKFTLDDAALLHNRLTLNIKLVSERSLGDTKIGKVQIPLKELFDSLGGGDDQKKQIKH 120

Query: 121 -NYSVRLSNGTVKGNLDLAYKFGEKYTIERPXXXXXXXXXEPRNMNGVDTPQVMAYPSTF 180
             YSVR S+G  KG+++  YKFG+K+T+  P         EP          VMAYPS  
Sbjct: 121 VGYSVRTSSGKPKGSINFGYKFGDKFTV--PVPEAHKKTHEP----------VMAYPSGH 175

Query: 181 PDLSSTY 182
           P  SS Y
Sbjct: 181 PGSSSGY 175

[Close]

BLAST of Carg25033 vs. TrEMBL
Match: tr|W9RKZ0|W9RKZ0_9ROSA (Uncharacterized protein OS=Morus notabilis OX=981085 GN=L484_002544 PE=4 SV=1)

HSP 1 Score: 158.7 bits (400), Expect = 1.6e-35
Identity = 78/141 (55.32%), Postives = 105/141 (74.47%), Query Frame = 0


Query: 1   MDVRQLEIRIIKANDLKDVNLMTKMDVFALVSISGDQLNNPQQKTDVDKDGGTSPKWNFH 60
           M+ R L+I +I A DLKDVN ++KMDV+A+VSISGD  +  +QKT VDKD G +P+WN+ 
Sbjct: 1   MECRPLDITLISATDLKDVNFLSKMDVYAVVSISGDSFSKSKQKTHVDKDSGPNPRWNYT 60

Query: 61  TQFTVDDAAVQENRVTLKIKLISNRSLGNKEIGVVYVQIKEMFDGGGAGEEEKSGNYSVR 120
            +FTV DAA ++N++TLKIKL+S+RS G+KEIG V+V IKE+ D  G  + E    Y+VR
Sbjct: 61  IKFTVPDAAAKQNQLTLKIKLVSDRSFGDKEIGEVHVPIKELLDNYGDEKSENLVTYNVR 120

Query: 121 LSNGTVKGNLDLAYKFGEKYT 142
           L +G  KG L  +YKFGEK+T
Sbjct: 121 LPSGKSKGTLSFSYKFGEKFT 141

The following BLAST results are available for this feature:

BLAST of Carg25033 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022933510.1	1.0e-102	96.10	protein SRC2 homolog [Cucurbita moschata]	[more]
XP_022969944.1	7.6e-98	92.64	protein SRC2-like [Cucurbita maxima]	[more]
XP_023530282.1	3.8e-97	92.70	protein SRC2 homolog [Cucurbita pepo subsp. pepo]	[more]
XP_022146019.1	2.9e-57	69.47	protein SRC2-like [Momordica charantia]	[more]
XP_022146005.1	3.7e-52	64.97	protein SRC2-like [Momordica charantia]	[more]

BLAST of Carg25033 vs. TAIR10


Match Name	E-value	Identity	Description
AT1G09070.1	6.7e-32	50.00	soybean gene regulated by cold-2	[more]
AT3G16510.1	1.6e-20	37.41	Calcium-dependent lipid-binding (CaLB domain) family protein	[more]
AT4G15755.1	2.0e-20	39.57	Calcium-dependent lipid-binding (CaLB domain) family protein	[more]
AT3G62780.1	1.3e-14	37.14	Calcium-dependent lipid-binding (CaLB domain) family protein	[more]
AT4G15740.1	1.2e-12	29.45	Calcium-dependent lipid-binding (CaLB domain) family protein	[more]

BLAST of Carg25033 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|O04023\|SRC2_ARATH	1.2e-30	50.00	Protein SRC2 homolog OS=Arabidopsis thaliana OX=3702 GN=SRC2 PE=1 SV=1	[more]
sp\|O04133\|SRC2_SOYBN	1.3e-27	37.91	Protein SRC2 OS=Glycine max OX=3847 GN=SRC2 PE=2 SV=1	[more]

BLAST of Carg25033 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A0A0LW10\|A0A0A0LW10_CUCSA	3.2e-52	64.48	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G569470 PE=4 SV=1	[more]
tr\|A0A1S3BPP9\|A0A1S3BPP9_CUCME	4.2e-52	63.93	protein SRC2-like OS=Cucumis melo OX=3656 GN=LOC103492167 PE=4 SV=1	[more]
tr\|A0A2I4GPS8\|A0A2I4GPS8_9ROSI	7.6e-38	48.00	protein SRC2 homolog OS=Juglans regia OX=51240 GN=LOC109009750 PE=4 SV=1	[more]
tr\|M5WC75\|M5WC75_PRUPE	7.1e-36	49.20	Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_6G322500 PE=4 SV=1	[more]
tr\|W9RKZ0\|W9RKZ0_9ROSA	1.6e-35	55.32	Uncharacterized protein OS=Morus notabilis OX=981085 GN=L484_002544 PE=4 SV=1	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR035892	C2_domain_sf
IPR000008	C2_dom

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg25033-RA	Carg25033-RA	mRNA

InterPro

Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000008	C2 domain	SMART	SM00239	C2_3c	coord: 5..111 e-value: 3.2E-10 score: 50.0
IPR000008	C2 domain	PFAM	PF00168	C2	coord: 5..107 e-value: 4.8E-11 score: 42.8
IPR000008	C2 domain	PROSITE	PS50004	C2	coord: 1..96 score: 9.642
IPR035892	C2 domain superfamily	GENE3D	G3DSA:2.60.40.150		coord: 3..137 e-value: 7.8E-15 score: 57.2
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 176..231
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 193..207
None	No IPR available	PANTHER	PTHR32246:SF18	C2 DOMAIN-CONTAINING PROTEIN-RELATED	coord: 1..227
None	No IPR available	PANTHER	PTHR32246	FAMILY NOT NAMED	coord: 1..227
None	No IPR available	CDD	cd04051	C2_SRC2_like	coord: 6..132 e-value: 9.95807E-36 score: 123.495
None	No IPR available	SUPERFAMILY	SSF49562	C2 domain (Calcium/lipid-binding domain, CaLB)	coord: 3..138

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Carg25033	Cla005226	Watermelon (97103) v1	carwmB0236
Carg25033	Csa1G569470	Cucumber (Chinese Long) v2	carcuB0273
Carg25033	MELO3C015314	Melon (DHL92) v3.5.1	carmeB0249
Carg25033	ClCG03G017040	Watermelon (Charleston Gray)	carwcgB0239
Carg25033	CSPI01G26530	Wild cucumber (PI 183967)	carcpiB0277
Carg25033	Cucsa.181980	Cucumber (Gy14) v1	carcgyB0290
Carg25033	CmoCh11G011730	Cucurbita moschata (Rifu)	carcmoB0346
Carg25033	Lsi06G001210	Bottle gourd (USVL1VR-Ls)	carlsiB221
Carg25033	Cp4.1LG04g00520	Cucurbita pepo (Zucchini)	carcpeB0347
Carg25033	CsGy1G025800	Cucumber (Gy14) v2	carcgybB0260
Carg25033	MELO3C015314.2	Melon (DHL92) v3.6.1	carmedB0258
Carg25033	CsaV3_1G038880	Cucumber (Chinese Long) v3	carcucB0276
Carg25033	Cla97C03G067410	Watermelon (97103) v2	carwmbB0253
Carg25033	Bhi02G001750	Wax gourd	carwgoB0315

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Carg25033	Cucurbita maxima (Rimu)	carcmaB0342
Carg25033	Cucurbita pepo (Zucchini)	carcpeB0346
Carg25033	Wax gourd	carwgoB0314