Carg25002 (gene) Silver-seed gourd

Overview
NameCarg25002
Typegene
OrganismCucurbita argyrosperma (Silver-seed gourd)
DescriptionZinc finger family protein
LocationCucurbita_argyrosperma_scaffold_187 : 293458 .. 296782 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexonthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTACTCTACGACTGATAATATGGGAAAGGAAAATTTGCTGCAGAGAGTAGATGACAACACTGAAGTGAATGGTTGTTCAACTACCGAGAACGAAGATCTTGGTTGTCAGTCTCGCCATAGTGTAGGCAAGGAATCTGGGGCAAGTTGTCGTGTGTGTCAATGTAGCGAATCTGACAGAAGAGGTGATGCTGTTTTAGGATTTCTAGGCATTACTCCTCCAATAATGGAAGAAAGAAAAAGTGATCGGGATTCTACGTCCGAGAAGCAAAGTCTAGAACATGTTGATGGTTGTTCCGTGCTGAAAAAAAACGTTAAAGGGGATTCTGGTTCGATTAAGTTCATAGGCCCTAATGGGGAGGTTTTCATTTGCAAAGCTGATATTGAAATGGGTTCATGTCATCTTGAAGATGCATTAGTGGAGCTTGGGTGTTCTTGCAAGAGTGACCTTGCTCTTGTACACTATGCATGTGCTCTTAAAGTGGTTTGTCAGCCATGGATCAACAGTTTGTGAAATTTGTGGATGTATTGCGGAAAATATTAGAACTGATGACTTTAGAAAGGTTGTGAGTTCTTTAAAAGAATATGAAGCTTTAAGGGAAAGAACTGCTCGTGGGGAACCGAATCCTATGCAGACAATTGCTAGTACCGATATCGATCCTGATGCTGTTGCTGCTGTCCGCAGGCAGCGGCTTAGTGAAATTGCATTGTGGTTTAGTCCTCATAGTTATATTAGCAACAATAACTCTAGTGCAGCCTCCCAGGTTGTTTCTGAACATTTGAATACCATCTCAGAAAATGTCGTTCGTGCCGAAAATCCTGCAACCAGGTGGGCTGTTGAGGGTACTGGAATTCTCCTTGCTACAGGTCTGCTCACCGTGACGCTCGCTTGCCTAATAGCTCCTCGTGTGGGGAAGGTAAGTCTTGGTAGCTGTTTTATATTATAGTAATTCAGATGCATCTTTCTTGTCAATATGGTTCATTTAAATTCTCTTATTTTAAAATGAATTCATAGTACTGCAAATTACTGAGGTAAATTTAAAAAATAACGTAGTGTTGAAAAATAATTTTGATTTAAGAGTGTTGAAATAAGACAAATTACAAAATTGGGGTAGAGGAGCAAACTATTGACAAAAATAGGGTAGATTTTTTCAGGATGATTGCCATGTCGCGTATATCGTACTTGAGTTTTAGGCCTTTGTTTATTTTCAAATAATAATCCAATTGTCTTCTATTATGGTTTGCTTGTTCAATGAGTTCTTGTTGTGTTATGTTGAAGACATGGAAACCATCAATACACCATTAGAGCAACCATCCACCACGAAACCAAAAAACACACAACAACCTCTACTTAATTCCCCACAAAGAAGGGAAAAAAGGAACACATAATTCAATCATTTTGTACACAATCAAATTTTAAAGTGGAATAGAAACCTACAAACTCCACAAAAAGTCCACTCCTTGAGCGTTCATTTCATCTCTCTACTTCATTGGTCTTCTTCAAACATTATGTGAGACCCGAGTAAAGGAGGGGTACATAAATGGGTCGAGACCACATTTGAATGAGAGGGATCATGAGAATTAGATGACTAAGAAAGACTTAAAAAAATTGAAAGTTTCTACCTATGCCAATATCATAAAAGAGTGATCATGGGAATAGGATAACTAAGAAAGATTTAAAAGAATTGAAAGTCACTTACCTATACCAATAAGGTGCACCTTCCTTTTTGGTGGCTTAATCATATGAACTCCATAGTTAAGCATGCTTTACTTCGAGCAATTCTAAGTTGGGTGACTTCTTGGGAATTCTCCTAGTGTAACGACCCGCTTTTTGAGGGACTCAAGCCATGAACCGTTACTCACTAATGTGAAATAGTTAAACACGTGCATGAACATATGAAATTCATTTAAAGTAGTAACGAAATTTTTTGATTTTACAAAGGATAAACGGAGACCACCAAAATAGAATATTACAAGTTTAGACTATTTAAAATACATGAAGTACAAAAATTAAAAGACAAGTATGAAAGAAAATCTAGACTTGGATATGATTTGATTCCCTATGGCCAACGCCCACGTGCCCCTCCGCCTCAGCCGCTACATCAGGTTGCACCTGAAAAGAAAATTGAAAAAGTAGGATTGAGTATATAAAATATACTCAGTAACTAGCTTGCTGGTAGTTCATAGTTTGTTTTAAGTCTTATGAAATAAATTTCTTTCGTTTAGTGTCTTATTTTGCTTTAGGAGTTCGTTCCTTAGAGTAAGTTCTTTCTAGGCTACACCCTAGGTTAGTTCGTTCCACCTAGCTCAACTTAGGGTAATTCAGTGGAAACTTGTTTAAGTTCTTGGTTCTTGTTTAAGTTCTTGATTATAGTTCTTGTTTAAGTTCTTGATTATAGTTCTAGTCCTGTATCATAGGCTCTCAAGGCGCAACCTCGACCTCAATCATAAGTTCTCATAAGATTCATGCATTCTAAAGTTTAACCAACTCTAAGTTACTATTGTGGATTTCTGCTGCTCGTGACAGGTTCACTAAAAGGAAACTAACTAGTAAACTCCCTAGTAATCCTCATAGAGTACAACCATACGTCATAAGATATCATAAGCCAGTTTTATAGTTATCCGGACCCCTGATAGTCGAGTCAGGTTTACAATTAAAGCTAGTTGGCGAGCTTATTGTTATAACTTGGGTTTGTTTGGGGGTAGAGTTCCTCCTTGCCATCGGGGATGAATATGCCAAGGTTTCTATTAAGGATAACTCAAATTTATGGATATATCGACACATAGTTTAATATCGAAGGCTATTATTGATAAATTACTCTAAATAACAGTAGAGTTTATATTTTATTAAGACAATTTTTTAAGAACATTAACAAATATATAATTGCCAATATAAAATTGAATCGACCATATGTCGTCGTTAGTTTCTCTTTGGAGTGCCAATGCTATGGGGTTTTGTAATTGTTCCATTCATTGATATCCTTTGATCGCGCTAGATTTTTTTCTTGAAGTACCTCTTAAAGAATTTTATTTTGGTGCAGAAAACTGCAAAAAGTGGCCTCCATATTCTTCTCGGAGGAGTTTGTGCGTTAACCGTAGTGGTTTTCTTCCGCTTTGTGAGTATAATGCATTTTATTTGGCCTTAAACTTGCTTTTCTGGCATCTTTTTTTACTTTTATCATAGGAAACCGTTTATTAATTAGTAACGCATTGACTGGTAGAATGGACTAAGGGTCTCACTCAAATGTAGTTGTCGGGTGTCATAATCACAATCATGTGGCAGCAAGACGACGATTGGGCGATACTTGTTCTAACTCAATGAACAA

mRNA sequence

ATGTACTCTACGACTGATAATATGGGAAAGGAAAATTTGCTGCAGAGAGTAGATGACAACACTGAAGTGAATGGTTGTTCAACTACCGAGAACGAAGATCTTGGTTGTCAGTCTCGCCATAGTGTAGGCAAGGAATCTGGGGCAAGTTGTCGTGTGTGTCAATGTAGCGAATCTGACAGAAGAGGTGATGCTGTTTTAGGATTTCTAGGCATTACTCCTCCAATAATGGAAGAAAGAAAAAGTGATCGGGATTCTACGTCCGAGAAGCAAAGTCTAGAACATGTTGATGGTTGTTCCGTGCTGAAAAAAAACGTTAAAGGGGATTCTGGTTCGATTAAGTTCATAGGCCCTAATGGGGAGGTTTTCATTTGCAAAGCTGATATTGAAATGGGTTCATGTCATCTTGAAGATGCATTAGTGGAGCTTGGGTGTTCTTGCAAGAGTGACCTTGCTCTTGTACACTATGCATGTGCTCTTAAAGTGGTTGTGAGTTCTTTAAAAGAATATGAAGCTTTAAGGGAAAGAACTGCTCGTGGGGAACCGAATCCTATGCAGACAATTGCTAGTACCGATATCGATCCTGATGCTGTTGCTGCTGTCCGCAGGCAGCGGCTTAGTGAAATTGCATTGTGGTTTAGTCCTCATAGTTATATTAGCAACAATAACTCTAGTGCAGCCTCCCAGGTTGTTTCTGAACATTTGAATACCATCTCAGAAAATGTCGTTCGTGCCGAAAATCCTGCAACCAGGTGGGCTGTTGAGGGTACTGGAATTCTCCTTGCTACAGGTCTGCTCACCGTGACGCTCGCTTGCCTAATAGCTCCTCGTGTGGGGAAGAAAACTGCAAAAAGTGGCCTCCATATTCTTCTCGGAGGAGTTTGTGCGTTAACCGTAGTGGTTTTCTTCCGCTTTGTGAGTATAATGCATTTTATTTGGCCTTAAACTTGCTTTTCTGGCATCTTTTTTTACTTTTATCATAGGAAACCGTTTATTAATTAGTAACGCATTGACTGGTAGAATGGACTAAGGGTCTCACTCAAATGTAGTTGTCGGGTGTCATAATCACAATCATGTGGCAGCAAGACGACGATTGGGCGATACTTGTTCTAACTCAATGAACAA

Coding sequence (CDS)

ATGTACTCTACGACTGATAATATGGGAAAGGAAAATTTGCTGCAGAGAGTAGATGACAACACTGAAGTGAATGGTTGTTCAACTACCGAGAACGAAGATCTTGGTTGTCAGTCTCGCCATAGTGTAGGCAAGGAATCTGGGGCAAGTTGTCGTGTGTGTCAATGTAGCGAATCTGACAGAAGAGGTGATGCTGTTTTAGGATTTCTAGGCATTACTCCTCCAATAATGGAAGAAAGAAAAAGTGATCGGGATTCTACGTCCGAGAAGCAAAGTCTAGAACATGTTGATGGTTGTTCCGTGCTGAAAAAAAACGTTAAAGGGGATTCTGGTTCGATTAAGTTCATAGGCCCTAATGGGGAGGTTTTCATTTGCAAAGCTGATATTGAAATGGGTTCATGTCATCTTGAAGATGCATTAGTGGAGCTTGGGTGTTCTTGCAAGAGTGACCTTGCTCTTGTACACTATGCATGTGCTCTTAAAGTGGTTGTGAGTTCTTTAAAAGAATATGAAGCTTTAAGGGAAAGAACTGCTCGTGGGGAACCGAATCCTATGCAGACAATTGCTAGTACCGATATCGATCCTGATGCTGTTGCTGCTGTCCGCAGGCAGCGGCTTAGTGAAATTGCATTGTGGTTTAGTCCTCATAGTTATATTAGCAACAATAACTCTAGTGCAGCCTCCCAGGTTGTTTCTGAACATTTGAATACCATCTCAGAAAATGTCGTTCGTGCCGAAAATCCTGCAACCAGGTGGGCTGTTGAGGGTACTGGAATTCTCCTTGCTACAGGTCTGCTCACCGTGACGCTCGCTTGCCTAATAGCTCCTCGTGTGGGGAAGAAAACTGCAAAAAGTGGCCTCCATATTCTTCTCGGAGGAGTTTGTGCGTTAACCGTAGTGGTTTTCTTCCGCTTTGTGAGTATAATGCATTTTATTTGGCCTTAA

Protein sequence

MYSTTDNMGKENLLQRVDDNTEVNGCSTTENEDLGCQSRHSVGKESGASCRVCQCSESDRRGDAVLGFLGITPPIMEERKSDRDSTSEKQSLEHVDGCSVLKKNVKGDSGSIKFIGPNGEVFICKADIEMGSCHLEDALVELGCSCKSDLALVHYACALKVVVSSLKEYEALRERTARGEPNPMQTIASTDIDPDAVAAVRRQRLSEIALWFSPHSYISNNNSSAASQVVSEHLNTISENVVRAENPATRWAVEGTGILLATGLLTVTLACLIAPRVGKKTAKSGLHILLGGVCALTVVVFFRFVSIMHFIWP
Homology
[Close]
BLAST of Carg25002 vs. NCBI nr
Match: XP_023544629.1 (uncharacterized protein LOC111804155 [Cucurbita pepo subsp. pepo] >XP_023544630.1 uncharacterized protein LOC111804155 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 582.0 bits (1499), Expect = 1.2e-162
Identity = 303/330 (91.82%), Postives = 303/330 (91.82%), Query Frame = 0 

Query: 1   MYSTTDNMGKENLLQRVDDNTEVNGCSTTENEDLGCQSRHSVGKESGASCRVCQCSESDR 60
           MYSTTDNMGKENLLQRVDDNTEVNGCSTTENEDLGCQSRHSVGKESGASCRVCQCSESDR
Sbjct: 1   MYSTTDNMGKENLLQRVDDNTEVNGCSTTENEDLGCQSRHSVGKESGASCRVCQCSESDR 60

Query: 61  RGDAVLGFLGITPPIMEERKSDRDSTSEKQSLEHVDGCSVLKKNVKGDSGSIKFIGPNGE 120
           RGDAVLGFLGITPPIMEERKSDRDSTSEKQSLEHVDGCSVLKKNVKGDSGSIKFIGPNGE
Sbjct: 61  RGDAVLGFLGITPPIMEERKSDRDSTSEKQSLEHVDGCSVLKKNVKGDSGSIKFIGPNGE 120

Query: 121 VFICKADIEMGSCHLEDALVELGCSCKSDLALVHYACALK-------------------- 180
           VFICKADIEMGSCHLEDALVELGCSCKSDLALVHYACALK                    
Sbjct: 121 VFICKADIEMGSCHLEDALVELGCSCKSDLALVHYACALKWFVSHGSTVCEICGCIAENI 180

Query: 181 ------VVVSSLKEYEALRERTARGEPNPMQTIASTDIDPDAVAAVRRQRLSEIALWFSP 240
                  VVSSLKEYEALRERTARGEPNPMQTIASTDIDPDAVAAVRRQRLSEIALWFSP
Sbjct: 181 RTDDFRKVVSSLKEYEALRERTARGEPNPMQTIASTDIDPDAVAAVRRQRLSEIALWFSP 240

Query: 241 HSYISNNNSSAASQVVSEHLNTISENVVRAENPATRWAVEGTGILLATGLLTVTLACLIA 300
           HSYISNNNSSAASQVVSEHLNTISENVVRAENPATRWAVEGTGILLATGLLTVTLACLIA
Sbjct: 241 HSYISNNNSSAASQVVSEHLNTISENVVRAENPATRWAVEGTGILLATGLLTVTLACLIA 300

Query: 301 PRVGKKTAKSGLHILLGGVCALTVVVFFRF 305
           PRVGKKTAKSGLHILLGGVCALTVVVFFRF
Sbjct: 301 PRVGKKTAKSGLHILLGGVCALTVVVFFRF 330

[Close]
BLAST of Carg25002 vs. NCBI nr
Match: XP_022928641.1 (uncharacterized protein LOC111435487 [Cucurbita moschata] >XP_022928642.1 uncharacterized protein LOC111435487 [Cucurbita moschata])

HSP 1 Score: 580.1 bits (1494), Expect = 4.5e-162
Identity = 302/330 (91.52%), Postives = 302/330 (91.52%), Query Frame = 0 

Query: 1   MYSTTDNMGKENLLQRVDDNTEVNGCSTTENEDLGCQSRHSVGKESGASCRVCQCSESDR 60
           MYSTTDNMGKENLLQRVDDNTEVNGCST ENEDLGCQSRHSVGKESGASCRVCQCSESDR
Sbjct: 1   MYSTTDNMGKENLLQRVDDNTEVNGCSTAENEDLGCQSRHSVGKESGASCRVCQCSESDR 60

Query: 61  RGDAVLGFLGITPPIMEERKSDRDSTSEKQSLEHVDGCSVLKKNVKGDSGSIKFIGPNGE 120
           RGDAVLGFLGITPPIMEERKSDRDSTSEKQSLEHVDGCSVLKKNVKGDSGSIKFIGPNGE
Sbjct: 61  RGDAVLGFLGITPPIMEERKSDRDSTSEKQSLEHVDGCSVLKKNVKGDSGSIKFIGPNGE 120

Query: 121 VFICKADIEMGSCHLEDALVELGCSCKSDLALVHYACALK-------------------- 180
           VFICKADIEMGSCHLEDALVELGCSCKSDLALVHYACALK                    
Sbjct: 121 VFICKADIEMGSCHLEDALVELGCSCKSDLALVHYACALKWFVSHGSTVCEICGCIAENI 180

Query: 181 ------VVVSSLKEYEALRERTARGEPNPMQTIASTDIDPDAVAAVRRQRLSEIALWFSP 240
                  VVSSLKEYEALRERTARGEPNPMQTIASTDIDPDAVAAVRRQRLSEIALWFSP
Sbjct: 181 RTDDFRKVVSSLKEYEALRERTARGEPNPMQTIASTDIDPDAVAAVRRQRLSEIALWFSP 240

Query: 241 HSYISNNNSSAASQVVSEHLNTISENVVRAENPATRWAVEGTGILLATGLLTVTLACLIA 300
           HSYISNNNSSAASQVVSEHLNTISENVVRAENPATRWAVEGTGILLATGLLTVTLACLIA
Sbjct: 241 HSYISNNNSSAASQVVSEHLNTISENVVRAENPATRWAVEGTGILLATGLLTVTLACLIA 300

Query: 301 PRVGKKTAKSGLHILLGGVCALTVVVFFRF 305
           PRVGKKTAKSGLHILLGGVCALTVVVFFRF
Sbjct: 301 PRVGKKTAKSGLHILLGGVCALTVVVFFRF 330

[Close]
BLAST of Carg25002 vs. NCBI nr
Match: XP_022967817.1 (uncharacterized protein LOC111467221 [Cucurbita maxima])

HSP 1 Score: 568.9 bits (1465), Expect = 1.0e-158
Identity = 298/331 (90.03%), Postives = 301/331 (90.94%), Query Frame = 0 

Query: 1   MYSTTDNMGKENLLQR-VDDNTEVNGCSTTENEDLGCQSRHSVGKESGASCRVCQCSESD 60
           MYSTT+NMGKENLLQR VDDNTEVNGCST ENEDLGCQSRHSVGKESGASCRVCQCSESD
Sbjct: 1   MYSTTENMGKENLLQRVVDDNTEVNGCSTAENEDLGCQSRHSVGKESGASCRVCQCSESD 60

Query: 61  RRGDAVLGFLGITPPIMEERKSDRDSTSEKQSLEHVDGCSVLKKNVKGDSGSIKFIGPNG 120
           RRGDAVLGFLGITPPIMEERKSDRDSTSEKQSL+HVDGCS+LKK VKGDSGSIKFIGPNG
Sbjct: 61  RRGDAVLGFLGITPPIMEERKSDRDSTSEKQSLKHVDGCSMLKKTVKGDSGSIKFIGPNG 120

Query: 121 EVFICKADIEMGSCHLEDALVELGCSCKSDLALVHYACALK------------------- 180
           EVFICKADIEMGSCHLEDALVELGCSCKSDLALVHYACALK                   
Sbjct: 121 EVFICKADIEMGSCHLEDALVELGCSCKSDLALVHYACALKWFVSHGSTVCEICGCIAEN 180

Query: 181 -------VVVSSLKEYEALRERTARGEPNPMQTIASTDIDPDAVAAVRRQRLSEIALWFS 240
                   VVSSLKEYEALRERTARGEPNPMQTIASTDIDPDAVAAVRRQRLSEIALWFS
Sbjct: 181 IRTDDFRKVVSSLKEYEALRERTARGEPNPMQTIASTDIDPDAVAAVRRQRLSEIALWFS 240

Query: 241 PHSYISNNNSSAASQVVSEHLNTISENVVRAENPATRWAVEGTGILLATGLLTVTLACLI 300
           PHSYISNNNSSAASQVVSEHLNTISENVVRAENPATRWAVEGTGILLATGLLTVTLACLI
Sbjct: 241 PHSYISNNNSSAASQVVSEHLNTISENVVRAENPATRWAVEGTGILLATGLLTVTLACLI 300

Query: 301 APRVGKKTAKSGLHILLGGVCALTVVVFFRF 305
           APRVGKKTAKSGLHILLGGVCALTVVVFFRF
Sbjct: 301 APRVGKKTAKSGLHILLGGVCALTVVVFFRF 331

[Close]
BLAST of Carg25002 vs. NCBI nr
Match: XP_004146394.1 (PREDICTED: uncharacterized protein LOC101218157 [Cucumis sativus] >XP_011653898.1 PREDICTED: uncharacterized protein LOC101218157 [Cucumis sativus])

HSP 1 Score: 492.3 bits (1266), Expect = 1.2e-135
Identity = 262/328 (79.88%), Postives = 272/328 (82.93%), Query Frame = 0 

Query: 5   TDNMGKENLLQRVDDNTEVNGCSTTENEDLGCQSRHSVGKESGASCRVCQCSESDRRGDA 64
           TD M KEN +QRVDD  + N CST  +EDLG QSRHS+GKESGASCRVCQC ESDRRGDA
Sbjct: 2   TDMMVKENFVQRVDDEAKANDCSTVGSEDLGSQSRHSIGKESGASCRVCQCVESDRRGDA 61

Query: 65  VLGFLGITPPIMEERK--SDRDSTSEKQSLEHVDGCSVLKKNVKGDSGSIKFIGPNGEVF 124
           VLGFLGITPPIME RK   DRDS  EKQS E+VDG S+LKK+VKGDSGSIKFIGPNGEVF
Sbjct: 62  VLGFLGITPPIMEARKCDGDRDSKPEKQSTENVDGGSMLKKDVKGDSGSIKFIGPNGEVF 121

Query: 125 ICKADIEMGSCHLEDALVELGCSCKSDLALVHYACALK---------------------- 184
           ICK DIEMGSCH ED LVELGCSCKSDLALVHYACALK                      
Sbjct: 122 ICKTDIEMGSCHHEDGLVELGCSCKSDLALVHYACALKWFVSHGSTVCEICGCIAENIRT 181

Query: 185 ----VVVSSLKEYEALRERTARGEPNPMQTIASTDIDPDAVAAVRRQRLSEIALWFSPHS 244
                VVSSLKEYEALRERT  G PNPMQT ASTDIDPDAVAAVRRQRLSEI+LWFSPH+
Sbjct: 182 DDFRKVVSSLKEYEALRERTVSGVPNPMQTTASTDIDPDAVAAVRRQRLSEISLWFSPHN 241

Query: 245 YISNNNSSAASQVVSEHLNTISENVVRAENPATRWAVEGTGILLATGLLTVTLACLIAPR 304
           Y SNNNS+A SQVVSEHLNTISENVV AENPATRWAVEGTGILLATGLLTVTLACLIAPR
Sbjct: 242 YSSNNNSTATSQVVSEHLNTISENVVHAENPATRWAVEGTGILLATGLLTVTLACLIAPR 301

[Close]
BLAST of Carg25002 vs. NCBI nr
Match: XP_022159199.1 (uncharacterized protein LOC111025618 [Momordica charantia] >XP_022159200.1 uncharacterized protein LOC111025618 [Momordica charantia] >XP_022159201.1 uncharacterized protein LOC111025618 [Momordica charantia])

HSP 1 Score: 489.6 bits (1259), Expect = 8.1e-135
Identity = 258/331 (77.95%), Postives = 277/331 (83.69%), Query Frame = 0 

Query: 1   MYSTTDNMGKENLLQRVDDNTEVNGCSTTENEDLGCQSRHSVGKESG-ASCRVCQCSESD 60
           MYSTTD MGKEN+LQRVDD+ E NGCST ENEDLG QSRHSVGK+SG  SCRVCQC+ESD
Sbjct: 1   MYSTTDKMGKENMLQRVDDHAEANGCSTIENEDLGSQSRHSVGKDSGLPSCRVCQCTESD 60

Query: 61  RRGDAVLGFLGITPPIMEERKSDRDSTSEKQSLEHVDGCSVLKKNVKGDSGSIKFIGPNG 120
           RRGDAVLGFLGITPP+ + RK+D D   EKQ+LE+VDG  VL KNVKGDSGSI+FIGPNG
Sbjct: 61  RRGDAVLGFLGITPPLSQARKNDGDFKPEKQNLENVDGSPVLNKNVKGDSGSIEFIGPNG 120

Query: 121 EVFICKADIEMGSCHLEDALVELGCSCKSDLALVHYACALK------------------- 180
           EVFIC+ADIE GSC+ ED+LVELGCSCKSDLALVHYACALK                   
Sbjct: 121 EVFICRADIETGSCNNEDSLVELGCSCKSDLALVHYACALKWFVSHGSTVCEICGCIAEN 180

Query: 181 -------VVVSSLKEYEALRERTARGEPNPMQTIASTDIDPDAVAAVRRQRLSEIALWFS 240
                   VVSSLKEYEALRER A GEPNPMQT  STDIDPDA+AAVRRQRLSEI+LWFS
Sbjct: 181 IRTDDFRKVVSSLKEYEALRERIATGEPNPMQTHTSTDIDPDAIAAVRRQRLSEISLWFS 240

Query: 241 PHSYISNNNSSAASQVVSEHLNTISENVVRAENPATRWAVEGTGILLATGLLTVTLACLI 300
           PH+Y SNNNS+AASQVVSEHLNTISENVV +ENPATRWAVE TGILLATGLLTVTLA LI
Sbjct: 241 PHNYNSNNNSTAASQVVSEHLNTISENVVPSENPATRWAVEATGILLATGLLTVTLAWLI 300

Query: 301 APRVGKKTAKSGLHILLGGVCALTVVVFFRF 305
           APRVGKKTA SGLHILLGGVCALTVVVFFR+
Sbjct: 301 APRVGKKTASSGLHILLGGVCALTVVVFFRY 331

[Close]
BLAST of Carg25002 vs. TAIR10
Match: AT5G08750.3 (RING/FYVE/PHD zinc finger superfamily protein)

HSP 1 Score: 279.3 bits (713), Expect = 3.0e-75
Identity = 171/337 (50.74%), Postives = 212/337 (62.91%), Query Frame = 0 

Query: 8   MGKENLLQRVDDNTEVNGCSTTENEDLGCQSRHSVGKESG-ASCRVCQCSESDRRGDAVL 67
           + KEN L+  D     +G    +NE+     R+S  K++G  +CRVCQC+ESDRRGDA L
Sbjct: 8   LSKENQLETTDCGVSDHGSPPIKNEEHEA-PRYSSDKDTGLPTCRVCQCAESDRRGDAAL 67

Query: 68  GFLGITPPIMEERKSDRDSTSEKQSLEHVDGCSVLKKNVKGDSGSIKFIGPNGEVFIC-K 127
           GFLGITPP+ E R+S+    +  Q           + +V   SG I+ I P+GEVF+C  
Sbjct: 68  GFLGITPPVSEPRRSNAGEETVDQ-----------RSSVVKSSGFIELISPDGEVFVCAN 127

Query: 128 ADIEMGSCHLEDALVELGCSCKSDLALVHYACALK------------------------- 187
            DIEMG+    D L+ELGCSCK+DLALVHYACALK                         
Sbjct: 128 DDIEMGAWQHRDKLLELGCSCKNDLALVHYACALKWFVNHGSTVCEICGKTTENIRTVDF 187

Query: 188 -VVVSSLKEYEALRERTARGEPNPM---QTIASTDIDPDAVAAVRRQRLSEIALWFSPH- 247
             VV +LK+Y ALRERTA G+PNP+      +S+ IDPDAVAA+RRQRLSEI+LWF PH 
Sbjct: 188 NKVVIALKDYAALRERTADGDPNPVVVNNNTSSSGIDPDAVAAIRRQRLSEISLWFGPHC 247

Query: 248 ------SYISNNNSSAASQVVSEH-LNTISENVVRAENPATRWAVEGTGILLATGLLTVT 306
                              V SE  +  ++ +++  E+ AT+WAVEGTGILLATGLLTVT
Sbjct: 248 SXXXXXXXXXXXXXXXXXXVTSEQPVGIVNFDILPMESRATKWAVEGTGILLATGLLTVT 307

[Close]
BLAST of Carg25002 vs. TAIR10
Match: AT5G63780.1 (RING/FYVE/PHD zinc finger superfamily protein)

HSP 1 Score: 277.3 bits (708), Expect = 1.1e-74
Identity = 165/330 (50.00%), Postives = 209/330 (63.33%), Query Frame = 0 

Query: 8   MGKENLLQRVDDNTEVNGCSTTENEDLGCQSRHSVGKESG-ASCRVCQCSESDRRGDAVL 67
           MGKEN L+  +     + C   +NE+L  ++R+S   +SG  +CRVC  +ESDRRGD  L
Sbjct: 1   MGKENQLETTNCGVNDHDCPPVKNEELAAEARYSTDSDSGLPTCRVCHSAESDRRGDTAL 60

Query: 68  GFLGITPPIMEERKSDRDSTSE--KQSLEHVDGCSVLKKNVKGDSGSIKFIGPNGEVFIC 127
           GFLGITPP+ E RKS+ D T++   ++ E     SV+K N + +SG I+   P+ EVFIC
Sbjct: 61  GFLGITPPVPEARKSNVDGTADDVSKATESELKNSVVKSNGR-ESGFIELTSPDAEVFIC 120

Query: 128 KADIEMGSCHLEDALVELGCSCKSDLALVHYACALK------------------------ 187
             DIEMG    +DAL+ELGCSCK++LALVHYACALK                        
Sbjct: 121 TNDIEMGIQQHQDALLELGCSCKNELALVHYACALKWFLNHGSTVCEICGHPAENIKTAD 180

Query: 188 --VVVSSLKEYEALRERTARGEPNPMQTIASTD--IDPDAVAAVRRQRLSEIALWFSPHS 247
              VV +L++Y A+RERTA G         +TD  ID D VA +RRQRLSEI  WF PHS
Sbjct: 181 FNKVVIALRDYTAIRERTADGGDQIPVLPVNTDSTIDSDEVAVIRRQRLSEITSWFGPHS 240

Query: 248 Y-ISNNNSSAASQVVSEHLNTISENVVRAENPATRWAVEGTGILLATGLLTVTLACLIAP 306
                        +  + L  ++ +++  EN AT+WAVEGTGILLATGLLTVTL  LIAP
Sbjct: 241 LNXXXXXXXXXXXIPDQPLGVVNFDILPMENRATKWAVEGTGILLATGLLTVTLVWLIAP 300

[Close]
BLAST of Carg25002 vs. TrEMBL
Match: tr|A0A1S3B5N6|A0A1S3B5N6_CUCME (uncharacterized protein LOC103486085 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103486085 PE=4 SV=1)

HSP 1 Score: 488.8 bits (1257), Expect = 9.1e-135
Identity = 262/328 (79.88%), Postives = 272/328 (82.93%), Query Frame = 0 

Query: 5   TDNMGKENLLQRVDDNTEVNGCSTTENEDLGCQSRHSVGKESGASCRVCQCSESDRRGDA 64
           TD M KENL+QRVDD  + N CST  +EDLG QSRHSVGKESGASCRVCQC ESDRRGDA
Sbjct: 2   TDMMVKENLVQRVDDEAKENDCSTIGSEDLGSQSRHSVGKESGASCRVCQCVESDRRGDA 61

Query: 65  VLGFLGITPPIMEERK--SDRDSTSEKQSLEHVDGCSVLKKNVKGDSGSIKFIGPNGEVF 124
           VLGFLGITPPIME RK   DRDS  +KQS E+VDG S+LKK+ KGDSGSIKFIGPNGEVF
Sbjct: 62  VLGFLGITPPIMEARKCDGDRDSKPDKQSAENVDGGSMLKKDDKGDSGSIKFIGPNGEVF 121

Query: 125 ICKADIEMGSCHLEDALVELGCSCKSDLALVHYACALK---------------------- 184
           ICK DIEMGSCH EDALVELGCSCKSDLALVHYACALK                      
Sbjct: 122 ICKTDIEMGSCHHEDALVELGCSCKSDLALVHYACALKWFVSHGSTVCEICGCIAENIRT 181

Query: 185 ----VVVSSLKEYEALRERTARGEPNPMQTIASTDIDPDAVAAVRRQRLSEIALWFSPHS 244
                VVSSLKEYEALRERT  G PNPMQT ASTDIDPDAVAAVRRQRLSEI+LWFSPH+
Sbjct: 182 DDFRKVVSSLKEYEALRERTVSGVPNPMQTTASTDIDPDAVAAVRRQRLSEISLWFSPHN 241

Query: 245 YISNNNSSAASQVVSEHLNTISENVVRAENPATRWAVEGTGILLATGLLTVTLACLIAPR 304
           Y SNNNS+A SQVVSEHLNTISEN V AENPATRWAVEGTGILLATGLLTVTLACLIAPR
Sbjct: 242 YSSNNNSTATSQVVSEHLNTISENFVHAENPATRWAVEGTGILLATGLLTVTLACLIAPR 301

[Close]
BLAST of Carg25002 vs. TrEMBL
Match: tr|A0A1S3B510|A0A1S3B510_CUCME (uncharacterized protein LOC103486085 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103486085 PE=4 SV=1)

HSP 1 Score: 488.8 bits (1257), Expect = 9.1e-135
Identity = 262/328 (79.88%), Postives = 272/328 (82.93%), Query Frame = 0 

Query: 5   TDNMGKENLLQRVDDNTEVNGCSTTENEDLGCQSRHSVGKESGASCRVCQCSESDRRGDA 64
           TD M KENL+QRVDD  + N CST  +EDLG QSRHSVGKESGASCRVCQC ESDRRGDA
Sbjct: 2   TDMMVKENLVQRVDDEAKENDCSTIGSEDLGSQSRHSVGKESGASCRVCQCVESDRRGDA 61

Query: 65  VLGFLGITPPIMEERK--SDRDSTSEKQSLEHVDGCSVLKKNVKGDSGSIKFIGPNGEVF 124
           VLGFLGITPPIME RK   DRDS  +KQS E+VDG S+LKK+ KGDSGSIKFIGPNGEVF
Sbjct: 62  VLGFLGITPPIMEARKCDGDRDSKPDKQSAENVDGGSMLKKDDKGDSGSIKFIGPNGEVF 121

Query: 125 ICKADIEMGSCHLEDALVELGCSCKSDLALVHYACALK---------------------- 184
           ICK DIEMGSCH EDALVELGCSCKSDLALVHYACALK                      
Sbjct: 122 ICKTDIEMGSCHHEDALVELGCSCKSDLALVHYACALKWFVSHGSTVCEICGCIAENIRT 181

Query: 185 ----VVVSSLKEYEALRERTARGEPNPMQTIASTDIDPDAVAAVRRQRLSEIALWFSPHS 244
                VVSSLKEYEALRERT  G PNPMQT ASTDIDPDAVAAVRRQRLSEI+LWFSPH+
Sbjct: 182 DDFRKVVSSLKEYEALRERTVSGVPNPMQTTASTDIDPDAVAAVRRQRLSEISLWFSPHN 241

Query: 245 YISNNNSSAASQVVSEHLNTISENVVRAENPATRWAVEGTGILLATGLLTVTLACLIAPR 304
           Y SNNNS+A SQVVSEHLNTISEN V AENPATRWAVEGTGILLATGLLTVTLACLIAPR
Sbjct: 242 YSSNNNSTATSQVVSEHLNTISENFVHAENPATRWAVEGTGILLATGLLTVTLACLIAPR 301

[Close]
BLAST of Carg25002 vs. TrEMBL
Match: tr|A0A2P4MW03|A0A2P4MW03_QUESU (Uncharacterized protein OS=Quercus suber OX=58331 GN=CFP56_64239 PE=4 SV=1)

HSP 1 Score: 356.7 bits (914), Expect = 5.4e-95
Identity = 202/326 (61.96%), Postives = 233/326 (71.47%), Query Frame = 0 

Query: 8   MGKENLLQRVDDNTEVNGCSTTENEDLGCQSRHSVGKESG-ASCRVCQCSESDRRGDAVL 67
           MGKE+    +        C   E+E+ G  SRHS+ KE+G  +CRVCQC ESD+RGDA L
Sbjct: 1   MGKEDFSDTIKVGVSNEDCLNIESEESGTHSRHSLDKEAGLPNCRVCQCVESDKRGDAAL 60

Query: 68  GFLGITPPIMEERKSDRDSTSEKQSLEHVDGCSVLKKNVKGDSGSIKFIGPNGEVFICKA 127
           GFLGITPP+ E  KS+R+   + +S         LK+NV  +S  ++FIGPNGEVFIC  
Sbjct: 61  GFLGITPPLNEASKSNREVKPDSESK------FSLKRNVGRESEPVEFIGPNGEVFICNT 120

Query: 128 DIEMGSCHLEDALVELGCSCKSDLALVHYACAL--------------------------K 187
           D+E G+ H +D LVELGCSCK+DLALVHY CAL                          K
Sbjct: 121 DLETGTYHHQDTLVELGCSCKNDLALVHYGCALKWFVNHGSTVCEICGSAAENIRPADFK 180

Query: 188 VVVSSLKEYEALRERTARGEPNPMQTIASTDIDPDAVAAVRRQRLSEIALWFSPHSYISN 247
            VVSSLKEYEALRERTA GEPNP Q   ST +DPDAVAA+RRQRLSEI+LWF+PHS  SN
Sbjct: 181 KVVSSLKEYEALRERTASGEPNPAQMHTSTGVDPDAVAAIRRQRLSEISLWFNPHSNSSN 240

Query: 248 NNSSAA-SQVVSEH-LNTISENVVRAENPATRWAVEGTGILLATGLLTVTLACLIAPRVG 305
            N++AA SQVVSE  LNT+SE+   AENPAT+WAVEGTGILLATGLLTVTLA LIAPRVG
Sbjct: 241 YNTAAAVSQVVSEQPLNTVSED-APAENPATKWAVEGTGILLATGLLTVTLAWLIAPRVG 300

[Close]
BLAST of Carg25002 vs. TrEMBL
Match: tr|A0A2I4F7W1|A0A2I4F7W1_9ROSI (uncharacterized protein LOC108996339 OS=Juglans regia OX=51240 GN=LOC108996339 PE=4 SV=1)

HSP 1 Score: 354.8 bits (909), Expect = 2.0e-94
Identity = 196/326 (60.12%), Postives = 234/326 (71.78%), Query Frame = 0 

Query: 8   MGKENLLQRVDDNTEVNGCSTTENEDLGCQSRHSVGKESG-ASCRVCQCSESDRRGDAVL 67
           MGKE  L+   D      CS+ E+E+LG    HS  KE+G  SCRVCQC+ESD+ GDAVL
Sbjct: 1   MGKETHLK---DGVSNEDCSSIESEELGSHPCHSFDKEAGLPSCRVCQCTESDKMGDAVL 60

Query: 68  GFLGITPPIMEERKSDRD-STSEKQSLEHVDGCSVLKKNVKGDSGSIKFIGPNGEVFICK 127
           GFLGI+PP+ +  KS  +     K+ ++ ++    LKKN   + G ++FIGP+GEVFIC 
Sbjct: 61  GFLGISPPLQDASKSYGEVQPDRKEVIKDIENKFSLKKNGGRERGLVEFIGPDGEVFICN 120

Query: 128 ADIEMGSCHLEDALVELGCSCKSDLALVHYACAL-------------------------- 187
            D+EMGSCH +D LVELGCSCK+DLALVHYACAL                          
Sbjct: 121 TDLEMGSCHHQDTLVELGCSCKNDLALVHYACALKWFVNHGSTVCEICGCVAKNIRTADF 180

Query: 188 KVVVSSLKEYEALRERTARGEPNPMQTIASTDIDPDAVAAVRRQRLSEIALWFSPHSYIS 247
           K VV SLKE+EALRERTA GEP+P     +  +DPDAVAA+RRQRLSEI+LWF PH+  +
Sbjct: 181 KKVVGSLKEFEALRERTASGEPSPAPLRTNQGVDPDAVAAIRRQRLSEISLWFIPHNNSN 240

Query: 248 NNNSSAASQVVSEH-LNTISENVVRAENPATRWAVEGTGILLATGLLTVTLACLIAPRVG 305
            NNS+A SQVVSE  LNT+SE+VV  ENPAT+WAVEGTGILLATGLLTVTLA LIAPRVG
Sbjct: 241 YNNSAAVSQVVSEQPLNTVSEDVVPDENPATKWAVEGTGILLATGLLTVTLAWLIAPRVG 300

[Close]
BLAST of Carg25002 vs. TrEMBL
Match: tr|A0A0D2THY9|A0A0D2THY9_GOSRA (Uncharacterized protein OS=Gossypium raimondii OX=29730 GN=B456_012G037300 PE=4 SV=1)

HSP 1 Score: 340.9 bits (873), Expect = 3.1e-90
Identity = 187/328 (57.01%), Postives = 227/328 (69.21%), Query Frame = 0 

Query: 8   MGKENLLQRVDDNTEVNGCSTTENEDLGCQSRHSVGKESG-ASCRVCQCSESDRRGDAVL 67
           MGKENL Q V+     + CS  + +D G  SR+S+ KE+G  +CRVCQCSESD+RGDA L
Sbjct: 2   MGKENLPQPVNGGVSNDSCSNADIDDSGTYSRYSLDKEAGLPTCRVCQCSESDKRGDAAL 61

Query: 68  GFLGITPPIMEERKSDRDSTSEKQSLEH-VDGCSVLKKNVKGDSGSIKFIGPNGEVFICK 127
           GFLGITPP+ E  KS  ++  + + ++  V+      K+++ +SG ++FI P GEVFIC 
Sbjct: 62  GFLGITPPLAEAVKSKGEAKPDTEGVQQDVESDESHSKSLRRESGFVEFISPEGEVFICS 121

Query: 128 ADIEMGSCHLEDALVELGCSCKSDLALVHYACAL-------------------------- 187
            D+EMGSC  +DAL+ELGCSCKSDLALVHYACAL                          
Sbjct: 122 TDLEMGSCRHQDALIELGCSCKSDLALVHYACALKWFVSHGSTVCEICGNPAKTIRTSDF 181

Query: 188 KVVVSSLKEYEALRERTARGEPNPMQTIASTDIDPDAVAAVRRQRLSEIALWFSPHSYIS 247
           K VV SLK+YEALRERTA G+PNP Q  +S+ +DPDAVAA+RRQRLSEI+LWFSPH    
Sbjct: 182 KKVVVSLKDYEALRERTASGDPNPAQIHSSSGVDPDAVAAIRRQRLSEISLWFSPHGXXX 241

Query: 248 NNNSSAASQVVSEH--LNTISENVVRAENPATRWAVEGTGILLATGLLTVTLACLIAPRV 306
                            NT++E V  +E+PAT+WAVEGTGILLATGLLTVTLA LIAPRV
Sbjct: 242 XXXXXXXXXXXXXXXPTNTVTEEVTPSESPATKWAVEGTGILLATGLLTVTLAWLIAPRV 301

The following BLAST results are available for this feature:
BLAST of Carg25002 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_023544629.11.2e-16291.82uncharacterized protein LOC111804155 [Cucurbita pepo subsp. pepo] >XP_023544630.... [more]
XP_022928641.14.5e-16291.52uncharacterized protein LOC111435487 [Cucurbita moschata] >XP_022928642.1 unchar... [more]
XP_022967817.11.0e-15890.03uncharacterized protein LOC111467221 [Cucurbita maxima][more]
XP_004146394.11.2e-13579.88PREDICTED: uncharacterized protein LOC101218157 [Cucumis sativus] >XP_011653898.... [more]
XP_022159199.18.1e-13577.95uncharacterized protein LOC111025618 [Momordica charantia] >XP_022159200.1 uncha... [more]
BLAST of Carg25002 vs. TAIR10
Match NameE-valueIdentityDescription
AT5G08750.33.0e-7550.74RING/FYVE/PHD zinc finger superfamily protein[more]
AT5G63780.11.1e-7450.00RING/FYVE/PHD zinc finger superfamily protein[more]
BLAST of Carg25002 vs. Swiss-Prot
Match NameE-valueIdentityDescription
BLAST of Carg25002 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A1S3B5N6|A0A1S3B5N6_CUCME9.1e-13579.88uncharacterized protein LOC103486085 isoform X2 OS=Cucumis melo OX=3656 GN=LOC10... [more]
tr|A0A1S3B510|A0A1S3B510_CUCME9.1e-13579.88uncharacterized protein LOC103486085 isoform X1 OS=Cucumis melo OX=3656 GN=LOC10... [more]
tr|A0A2P4MW03|A0A2P4MW03_QUESU5.4e-9561.96Uncharacterized protein OS=Quercus suber OX=58331 GN=CFP56_64239 PE=4 SV=1[more]
tr|A0A2I4F7W1|A0A2I4F7W1_9ROSI2.0e-9460.12uncharacterized protein LOC108996339 OS=Juglans regia OX=51240 GN=LOC108996339 P... [more]
tr|A0A0D2THY9|A0A0D2THY9_GOSRA3.1e-9057.01Uncharacterized protein OS=Gossypium raimondii OX=29730 GN=B456_012G037300 PE=4 ... [more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR033275MARCH-like
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Carg25002-RACarg25002-RAmRNA


InterPro
Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR033275E3 ubiquitin-protein ligase MARCH-likePANTHERPTHR23012MEMBRANE ASSOCIATED RING FINGERcoord: 8..164
coord: 218..306
NoneNo IPR availablePANTHERPTHR23012:SF66RING/FYVE/PHD ZINC FINGER SUPERFAMILY PROTEINcoord: 8..164
coord: 218..306

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Carg25002MELO3C008933Melon (DHL92) v3.5.1carmeB0529
Carg25002CmaCh03G000370Cucurbita maxima (Rimu)carcmaB0735
Carg25002CmoCh03G000350Cucurbita moschata (Rifu)carcmoB0712
Carg25002Cp4.1LG10g12430Cucurbita pepo (Zucchini)carcpeB0743
Carg25002CsGy4G019060Cucumber (Gy14) v2carcgybB0532
Carg25002MELO3C008933.2Melon (DHL92) v3.6.1carmedB0534
Carg25002CsaV3_4G030700Cucumber (Chinese Long) v3carcucB0563
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:

None