Carg24940 (gene) Silver-seed gourd

Overview
NameCarg24940
Typegene
OrganismCucurbita argyrosperma (Silver-seed gourd)
DescriptionATP-dependent RNA helicase
LocationCucurbita_argyrosperma_scaffold_290 : 67479 .. 73334 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ATCCATCGTCTCTCTCTCTCTCTCTCTCTCTGCAAATGACCCAAAAACAACATTGACGAAAGAAAAACAGGCCGCTCTCATCTTCGTTTGAATCTGCCACAGCTTCTACGATCAAAATCTTTACTTTAATTCTCTGTAAATTTTTCTGTTGCTGCAATTTCCTGCCATTTCTGCACCTAGATCTGTACAAATTTCTCTGGTTTTTTTTGTTTGTTTGTTTGTTATTTTTGTTCCATTTTCGTCGTCAGTTTTGCCTTTTATCCGCCTTGAGAATACGAGAGCGGGTGGATTTTTGGTCGTGTAAATTGTAGGAATCATTTATGAACTTGAGCGAAACCCTTTTGTGGTCTATTGTTTTTCATTTTGGATCTTTTTGGTAGTTTTCGGTAGATTTCTTCTTTGTTTTTGTCGTCATTCAATCATTCGATCGGAAACCCTAGCTCCCGCTTTTTTTTGAACGTGGTTAGGGTCTGTGAGAGTAGTGATGAACAATAGAGGAAGGTATCCTCCTGGGATCGGTGCTGGACGAGGCGGAGGCGTGAATGCGAATCCTTCGTTTCAGTCAAGACCACATCAGCAGCAATATGTACAAAGAAATTTGGTACCGAATCAGCAGTATCAACAACAGCAGCACCAGAACCAGAACCAGCACCAGCACCAACATCAACACCAAAACCAGCAGCTTCAACAACAACAACAGTGGCTGAAAAGGAACCAGTTAGGTGGCGGTCCTGCTGATTCCAACGTTGACGAGGTGGAGAAGACCGTGCAGTCGGAGGCTGTTGACTCGAGGTTCGTGTTAAATACACGAAGGATTTGTGTTTCTGTTTATGCATTACTTTTTATGGGCATTTACATAGGGTGGTTGGGTTCATTTCTCTGTATGATCATATATGAGATTTTTGAGTTGTGATTTGGGAATTGTTGGGTTGCAAGCGTATGTTCTTCTTCTTCTTCTTCTTCTTCTTTTTTTTTTTTGCTATAGAAGGAGGTACGTAGTTAATTTTGTAAATATGGTGGATCCCATTAGCAATAGCCATTTGGTATAGTAAAATTTGCTGGGTTTCTGTTCCTGGTTTCATCTATCTGTCTGATCGTCACTAGTGATATTTTGCGCATATTTCATGTGACTGAAGACTTTGTGCATGCGGATGTTCTAGATTTTATATCTAACTTAATTTCTTTTATCAACGGGAAAAGTTTTGGATTTTGGCAAGTTGTATTGCTTGGCTCAGATAGAAACTGATTATTATCATTTATGCATTTTTTTTATGTGCAGTTCACAAGATTGGAAGGCTAGGTTAAAGATTCCACCACCTGATACACGATATAAAACAGAGGTATCCTACTGATAATTTTCGTAATGCTCTACAGCCAGTTTATAGCATATCGACTGCTGAATGCTCATTGATCCGTACGCACAGGAATGACAGATTAGTGTTATTTTGATATTTTAATTCTTCAGTGTGCTTTCTGTCTAGTTCATGCAAATTATAAATTCTCATTGGCCTCTCTGTATGAGAACACACCTAATTTTGTTAGCTTCTGACTTGCTTATTAACCATTTCCAGGATGTGACGGCTACCAAAGGAAATGAATTTGAGGACTATTTTCTAAAACGTGAATTACTCATGGGAATCTATGAGAAAGGCTTTGAAAGACCATCTCCTATTCAAGAAGAAAGTATTCCGATCGCTTTAACTGGTAGTGATATTCTTGCTAGAGCGAAGAACGGAACTGGAAAGACAGCTGCATTTTGCATTCCCGCCTTAGAAAAGATTGATCAGGATAACAATGTAATCCAAGGTTTGTTTTGAACCTTCATTAAGAGTCTTATATTATTTCTAAACACATACCCATTATATTGAGATTCATTCTAATATTCAAATTCTAAATAGCATTATTGTTATCCCAAACATTCCCAATGCACGGCAGTTCTACCTGAGTTTTTTCATCAGGCATCAAATTCTTCCCAACAACATTCTTCCTTTGTTACCCCCTTCTTCCACCAGAGCATTGATTCTGGCCACAGAGCTGGTGCTCATGTTGAATCTCATTCTTGAGGTCTTCCCATGTTTAAGACATGAAACCAATATCTTGTTAATGTCCAAAGGAAAAAGAAATGTCACTTGCAAGTTGTAAATCATGAGATAGATTCTGTTCTTTCCTTCAAAAAAACCCCTTCCACAAGACTAACCTCTTGAGTTCTATGCATTAATCTACTCAGTTTGCCCACCCCACGGTGAAAAGAAATGGTGAAGGCATTTTGTCTAGGGCCTGTGCTAATTTCAACCTCTACTATTATTTTATACGCCCCAATAATTTATTTTATGACTAATTTTAAAACATGTTATTTCATTTTTCCACTAGGCACTGGAAATGATTGGTCAAAATGCTGTTATGCCACATTTCAATGGCAATATTGATTCCTTTCTCAGTTTGTTTTGTTCACTTGTTTGACATTTGTTTTAACTTTCTATGTGAACAGTTGTTATCCTCGTTCCAACTCGAGAGTTGGCTCTTCAAACTTCACAAGTGTGTAAGGAACTCGGAAAGAATTTGAATATTCAAGTTATGGTTACAACAGGTGGTACCAGTTTAAAGGATGATATCATGCGACTATATCAACCAGTTCATTTATTAGTTGGAACTCCAGGAAGAATATTAGATCTTGCAAAAAAGGGTGTTTGTGTACTGAAAGATTGTTCTATGCTTATCATGGATGAGGTAATTACATGAGATATGAATGCATTAATAAATAAGTGACTTTGTTGTCGATATCATTATATTTTTCAGTAGGCATTAGTCCTATAATATTGCAATGGTAGGGTTATATCAACTAAATGATTGTTTGACTAGATTATAGATTGATAATTGAACAATGACATTGGCGGCAAGTATTAATTGCAATCGATCCTTATGTACTTGAGAATCATGTTGAAGGAATATAGTGTAAGGAAGTTTTACAACATAGTATGTAGTTAGTTTGTTGTTTTCTCTTTCTCTTGTTCTACTGTTTTTACCTCATAAACTGTTCTCAGGATGGGTAAAAGATGTAATATTTGCATCACGTGTTACTGCTGTTAGTACTTCTCCCGTTTTATGGTTACTCCAACATTTTTTTTTTAACCTGAGGTTTTCTTGATACATTGTAGACGACTCCGTTTTGCTTGGGACTGTCCTGTCCCTGCCTTTATCACCTTCCCTTTCATTTGCTCGATCATTATCTTGTCTCTTATACATGTTGCGTAGTAGTGTGATGTGTCAAATTTATGTTTTTATTTTCTTACCAAGTTCCCATTTCCCCCCCAAAGAATTAGTGTATGGTTGGTATTGCTGAAAGAAAGATTTCATGTTCTGGAGTAAACTTAAATCTTTGGGGTAATACTAGAAGTTAAGGTTACCACATTCAGGAAAGTATACCTATCGATCAAATTTATCTTGTCTCAATAGTTTAACTAGTTGCGACAAACTAATCATTTTGTTGTTCTGTTTCTCAGGCTGACAAGCTCTTGTCTCCAGAGTTCCAACCCTCAATAGAGCAGTTGATACGCTTTTTGCCTGCAAATCGGCAGGTTCTTATGTATTCCGCTACCTTTCCTGTTACTGTGAAGGACTTCAAAGATAGATATCTTCACAGGCCCTATATTATAAACTTAATGGACGAGCTTACTCTAAAGGGTATCACCCAATTCTATGCATTTGTTGAAGAAAGACAAAAAGTGCACTGCCTTAATACTCTTTTCTCTAAGGTTTGATCCCAAGCAAGCTAATTATTTTTCTTGATTTCCTCCCTACATTTGCTTTTCCTGTGTAAATCACAAAGTTAATGTTTCTATCTGCAGCTGCAAATCAACCAGTCAATTATCTTCTGCAATTCGGTAAATCGAGTTGAGTTGTTAGCCAAGAAAATTACAGAACTTGGTTATTCTTGTTTCTATATTCATGCAAAGATGCTGCAAGATCATCGTAACAGAGTATTTCATGACTTCCGAAATGGTGCATGCAGAAATCTCGTTTGTACTGGTATGCCATTTGTGTGCGCATAGTTATCCATGCATACAGCATGACTTTTTTGTTTTAAAAAAATAATTTTAAATTTGAAACATCCTTTCTTTATTGCATCTTTTTAAACTGTACATTTTTCTTTTCCCTTTTTTGAACATACATATCTTGTACACAGTTGCATGGCAAAATAAAATCCATAAAGCTATCCCATTTGTCCTGAACTAATTTCTTTTGATATGGGATGCACTTGCAGATTTATTTACAAGAGGAATAGACATTCAAGCAGTAAACGTTGTTATTAACTTCGATTTCCCCAAGAATTCAGAGACGTATCTACACAGGGTATGTGTCACATTCAGTTCCTGTTGATTATCATTATTATTACTTATTTACCCCTCAAATCTTTTAAAATTGTTCACTTGCAGGTGGGACGATCTGGAAGGTTTGGACACCTTGGGTTAGCTGTGAATTTAATCACCTATGAGGATCGTTTTAATTTGTATGCTTTTTTTCTTTTAAAAGAATATTTTGGTTGATTGCTGCCGTTTTCCATCATCATACATTCAGATTCACTGAAATGTGATTCTCCATACTACAGGTACAGGATTGAACAAGAACTTGGAACGGAAATAAAACAAATACCACCCCATATTGACCAGGCAATCTACTGCCGGTAATTTGTGGTGGGCATTGGATCCCAGGGTAAACAATCGGCAGCAGGTAAGAATCGTACTGTGCTACCTAATTCTCCTTCATTATTGTACACACACACTCACGTTTGCATATACATATTTATTGAAAAAACGATAGGCATACCTCTAGGGAAACGATAGGAATGTCTCTAGAATATTGATTGGAATACCTCTAGGGTATAGATGCTAGAAAAATCATTAGGATCAAGTAAATTACACGCTAGCTAAGGAGATGGTAATAAATAGAATGAGGGGAGTGAATTTCATACAACAATGAAATTGTTCTTCTATAAAGAAAAAGATAGGATTTTTACTACTTCAATTTAGCGTAGTCAACAATCTTGTTTAGTTACTATGGTTTGTTATATTTAGGAGTTATTAGGCACCTCAGTGGCAGGTAGGTTGATATTATGTCATTGACCACCAGCTACCCGTTACTGACCGACCTACGTACGAAACTGCACTAGTACGGAGTGCAGTCATTATGGGGATAACAGGCGTTGATTTTTCTTGTCCAAAAAAATCTGTTATGGTTTTAGAGAAATGTAGATGAGGCGTACCAATTTGTGTTCATATTCTTACATCTTTTGTTTCATGCTGGTCTAACTTTTTTATTCAATATGATGCTTGATTACAAAATTTCAATGTGAAAAGTTCGGAACCGTACATGATATAGTTTTCTGATGTCTTTGCTCGGCTACAATCGCGTAAAATCTTGCGTAGAACATGATTTAGTTTTTCCGATATGTCTGCTCGGCTACAATCGTGTAAAATCATCTTGCGTAGAACATGATATAGTTTCCAGATACGTCTGCTCGGCTACAACCGTGTAAAATCATCTTGCATAGAACACAATATAGTTTTTCTGATTATGTCTGCTCAGCTACAATCGTGTAAAATCATCTTGCGTAGAACATGATATAGTTTTTCTGATACGTCTGCTCGGCTACAATCGTGTAAAATCATCTTGCGTAGAAATTTATTGATGGAGTTTCCTTGTTCTTGTTCTCGTTGTTGTTCTTGAAGGTCAATGAAGAAGCTCTTTGGAGAGAGAGGCTTGTTTTCTGAGTCAATATCAACAACTGAAGAAGACTCAACTTGGCTTGGAATTCTATTAGTTAGAACCCTACCTATAATATATATATATATATATATA

mRNA sequence

ATCCATCGTCTCTCTCTCTCTCTCTCTCTCTGCAAATGACCCAAAAACAACATTGACGAAAGAAAAACAGGCCGCTCTCATCTTCGTTTGAATCTGCCACAGCTTCTACGATCAAAATCTTTACTTTAATTCTCTGTAAATTTTTCTGTTGCTGCAATTTCCTGCCATTTCTGCACCTAGATCTGTACAAATTTCTCTGGTTTTTTTTGTTTGTTTGTTTGTTATTTTTGTTCCATTTTCGTCGTCAGTTTTGCCTTTTATCCGCCTTGAGAATACGAGAGCGGGTGGATTTTTGGTCGTGTAAATTGTAGGAATCATTTATGAACTTGAGCGAAACCCTTTTGTGGTCTATTGTTTTTCATTTTGGATCTTTTTGGTAGTTTTCGGTAGATTTCTTCTTTGTTTTTGTCGTCATTCAATCATTCGATCGGAAACCCTAGCTCCCGCTTTTTTTTGAACGTGGTTAGGGTCTGTGAGAGTAGTGATGAACAATAGAGGAAGGTATCCTCCTGGGATCGGTGCTGGACGAGGCGGAGGCGTGAATGCGAATCCTTCGTTTCAGTCAAGACCACATCAGCAGCAATATGTACAAAGAAATTTGGTACCGAATCAGCAGTATCAACAACAGCAGCACCAGAACCAGAACCAGCACCAGCACCAACATCAACACCAAAACCAGCAGCTTCAACAACAACAACAGTGGCTGAAAAGGAACCAGTTAGGTGGCGGTCCTGCTGATTCCAACGTTGACGAGGTGGAGAAGACCGTGCAGTCGGAGGCTGTTGACTCGAGTTCACAAGATTGGAAGGCTAGGTTAAAGATTCCACCACCTGATACACGATATAAAACAGAGGATGTGACGGCTACCAAAGGAAATGAATTTGAGGACTATTTTCTAAAACGTGAATTACTCATGGGAATCTATGAGAAAGGCTTTGAAAGACCATCTCCTATTCAAGAAGAAAGTATTCCGATCGCTTTAACTGGTAGTGATATTCTTGCTAGAGCGAAGAACGGAACTGGAAAGACAGCTGCATTTTGCATTCCCGCCTTAGAAAAGATTGATCAGGATAACAATGTAATCCAAGTTGTTATCCTCGTTCCAACTCGAGAGTTGGCTCTTCAAACTTCACAAGTGTGTAAGGAACTCGGAAAGAATTTGAATATTCAAGTTATGGTTACAACAGGTGGTACCAGTTTAAAGGATGATATCATGCGACTATATCAACCAGTTCATTTATTAGTTGGAACTCCAGGAAGAATATTAGATCTTGCAAAAAAGGGTGTTTGTGTACTGAAAGATTGTTCTATGCTTATCATGGATGAGGCTGACAAGCTCTTGTCTCCAGAGTTCCAACCCTCAATAGAGCAGTTGATACGCTTTTTGCCTGCAAATCGGCAGGTTCTTATGTATTCCGCTACCTTTCCTGTTACTGTGAAGGACTTCAAAGATAGATATCTTCACAGGCCCTATATTATAAACTTAATGGACGAGCTTACTCTAAAGGGTATCACCCAATTCTATGCATTTGTTGAAGAAAGACAAAAAGTGCACTGCCTTAATACTCTTTTCTCTAAGCTGCAAATCAACCAGTCAATTATCTTCTGCAATTCGGTAAATCGAGTTGAGTTGTTAGCCAAGAAAATTACAGAACTTGGTTATTCTTGTTTCTATATTCATGCAAAGATGCTGCAAGATCATCGTAACAGAGTATTTCATGACTTCCGAAATGGTGCATGCAGAAATCTCGTTTGTACTGATTTATTTACAAGAGGAATAGACATTCAAGCAGTAAACGTTGTTATTAACTTCGATTTCCCCAAGAATTCAGAGACGTATCTACACAGGGTGGGACGATCTGGAAGGTTTGGACACCTTGGGTTAGCTGTGAATTTAATCACCTATGAGGATCGTTTTAATTTGTACAGGATTGAACAAGAACTTGGAACGGAAATAAAACAAATACCACCCCATATTGACCAGGCAATCTACTGCCGGTAATTTGTGGTGGGCATTGGATCCCAGGGTAAACAATCGGCAGCAGGTCAATGAAGAAGCTCTTTGGAGAGAGAGGCTTGTTTTCTGAGTCAATATCAACAACTGAAGAAGACTCAACTTGGCTTGGAATTCTATTAGTTAGAACCCTACCTATAATATATATATATATATATATA

Coding sequence (CDS)

ATGAACAATAGAGGAAGGTATCCTCCTGGGATCGGTGCTGGACGAGGCGGAGGCGTGAATGCGAATCCTTCGTTTCAGTCAAGACCACATCAGCAGCAATATGTACAAAGAAATTTGGTACCGAATCAGCAGTATCAACAACAGCAGCACCAGAACCAGAACCAGCACCAGCACCAACATCAACACCAAAACCAGCAGCTTCAACAACAACAACAGTGGCTGAAAAGGAACCAGTTAGGTGGCGGTCCTGCTGATTCCAACGTTGACGAGGTGGAGAAGACCGTGCAGTCGGAGGCTGTTGACTCGAGTTCACAAGATTGGAAGGCTAGGTTAAAGATTCCACCACCTGATACACGATATAAAACAGAGGATGTGACGGCTACCAAAGGAAATGAATTTGAGGACTATTTTCTAAAACGTGAATTACTCATGGGAATCTATGAGAAAGGCTTTGAAAGACCATCTCCTATTCAAGAAGAAAGTATTCCGATCGCTTTAACTGGTAGTGATATTCTTGCTAGAGCGAAGAACGGAACTGGAAAGACAGCTGCATTTTGCATTCCCGCCTTAGAAAAGATTGATCAGGATAACAATGTAATCCAAGTTGTTATCCTCGTTCCAACTCGAGAGTTGGCTCTTCAAACTTCACAAGTGTGTAAGGAACTCGGAAAGAATTTGAATATTCAAGTTATGGTTACAACAGGTGGTACCAGTTTAAAGGATGATATCATGCGACTATATCAACCAGTTCATTTATTAGTTGGAACTCCAGGAAGAATATTAGATCTTGCAAAAAAGGGTGTTTGTGTACTGAAAGATTGTTCTATGCTTATCATGGATGAGGCTGACAAGCTCTTGTCTCCAGAGTTCCAACCCTCAATAGAGCAGTTGATACGCTTTTTGCCTGCAAATCGGCAGGTTCTTATGTATTCCGCTACCTTTCCTGTTACTGTGAAGGACTTCAAAGATAGATATCTTCACAGGCCCTATATTATAAACTTAATGGACGAGCTTACTCTAAAGGGTATCACCCAATTCTATGCATTTGTTGAAGAAAGACAAAAAGTGCACTGCCTTAATACTCTTTTCTCTAAGCTGCAAATCAACCAGTCAATTATCTTCTGCAATTCGGTAAATCGAGTTGAGTTGTTAGCCAAGAAAATTACAGAACTTGGTTATTCTTGTTTCTATATTCATGCAAAGATGCTGCAAGATCATCGTAACAGAGTATTTCATGACTTCCGAAATGGTGCATGCAGAAATCTCGTTTGTACTGATTTATTTACAAGAGGAATAGACATTCAAGCAGTAAACGTTGTTATTAACTTCGATTTCCCCAAGAATTCAGAGACGTATCTACACAGGGTGGGACGATCTGGAAGGTTTGGACACCTTGGGTTAGCTGTGAATTTAATCACCTATGAGGATCGTTTTAATTTGTACAGGATTGAACAAGAACTTGGAACGGAAATAAAACAAATACCACCCCATATTGACCAGGCAATCTACTGCCGGTAA

Protein sequence

MNNRGRYPPGIGAGRGGGVNANPSFQSRPHQQQYVQRNLVPNQQYQQQQHQNQNQHQHQHQHQNQQLQQQQQWLKRNQLGGGPADSNVDEVEKTVQSEAVDSSSQDWKARLKIPPPDTRYKTEDVTATKGNEFEDYFLKRELLMGIYEKGFERPSPIQEESIPIALTGSDILARAKNGTGKTAAFCIPALEKIDQDNNVIQVVILVPTRELALQTSQVCKELGKNLNIQVMVTTGGTSLKDDIMRLYQPVHLLVGTPGRILDLAKKGVCVLKDCSMLIMDEADKLLSPEFQPSIEQLIRFLPANRQVLMYSATFPVTVKDFKDRYLHRPYIINLMDELTLKGITQFYAFVEERQKVHCLNTLFSKLQINQSIIFCNSVNRVELLAKKITELGYSCFYIHAKMLQDHRNRVFHDFRNGACRNLVCTDLFTRGIDIQAVNVVINFDFPKNSETYLHRVGRSGRFGHLGLAVNLITYEDRFNLYRIEQELGTEIKQIPPHIDQAIYCR
Homology
[Close]
BLAST of Carg24940 vs. NCBI nr
Match: XP_022940370.1 (DEAD-box ATP-dependent RNA helicase 8-like [Cucurbita moschata])

HSP 1 Score: 941.4 bits (2432), Expect = 1.2e-270
Identity = 503/505 (99.60%), Postives = 503/505 (99.60%), Query Frame = 0 

Query: 1   MNNRGRYPPGIGAGRGGGVNANPSFQSRPHQQQYVQRNLVPNQQXXXXXXXXXXXXXXXX 60
           MNNRGRYPPGIGAGRGGGVNANPSFQSRPHQQQYVQRNLVPNQ  XXXXXXXXXXXXXXX
Sbjct: 1   MNNRGRYPPGIGAGRGGGVNANPSFQSRPHQQQYVQRNLVPNQ--XXXXXXXXXXXXXXX 60

Query: 61  XXXXXXXXXXXXXLKRNQLGGGPADSNVDEVEKTVQSEAVDSSSQDWKARLKIPPPDTRY 120
           XXXXXXXXXXXXXLKRNQLGGGPADSNVDEVEKTVQSEAVDSSSQDWKARLKIPPPDTRY
Sbjct: 61  XXXXXXXXXXXXXLKRNQLGGGPADSNVDEVEKTVQSEAVDSSSQDWKARLKIPPPDTRY 120

Query: 121 KTEDVTATKGNEFEDYFLKRELLMGIYEKGFERPSPIQEESIPIALTGSDILARAKNGTG 180
           KTEDVTATKGNEFEDYFLKRELLMGIYEKGFERPSPIQEESIPIALTGSDILARAKNGTG
Sbjct: 121 KTEDVTATKGNEFEDYFLKRELLMGIYEKGFERPSPIQEESIPIALTGSDILARAKNGTG 180

Query: 181 KTAAFCIPALEKIDQDNNVIQVVILVPTRELALQTSQVCKELGKNLNIQVMVTTGGTSLK 240
           KTAAFCIPALEKIDQDNNVIQVVILVPTRELALQTSQVCKELGKNLNIQVMVTTGGTSLK
Sbjct: 181 KTAAFCIPALEKIDQDNNVIQVVILVPTRELALQTSQVCKELGKNLNIQVMVTTGGTSLK 240

Query: 241 DDIMRLYQPVHLLVGTPGRILDLAKKGVCVLKDCSMLIMDEADKLLSPEFQPSIEQLIRF 300
           DDIMRLYQPVHLLVGTPGRILDLAKKGVCVLKDCSMLIMDEADKLLSPEFQPSIEQLIRF
Sbjct: 241 DDIMRLYQPVHLLVGTPGRILDLAKKGVCVLKDCSMLIMDEADKLLSPEFQPSIEQLIRF 300

Query: 301 LPANRQVLMYSATFPVTVKDFKDRYLHRPYIINLMDELTLKGITQFYAFVEERQKVHCLN 360
           LPANRQVLMYSATFPVTVKDFKDRYLHRPYIINLMDELTLKGITQFYAFVEERQKVHCLN
Sbjct: 301 LPANRQVLMYSATFPVTVKDFKDRYLHRPYIINLMDELTLKGITQFYAFVEERQKVHCLN 360

Query: 361 TLFSKLQINQSIIFCNSVNRVELLAKKITELGYSCFYIHAKMLQDHRNRVFHDFRNGACR 420
           TLFSKLQINQSIIFCNSVNRVELLAKKITELGYSCFYIHAKMLQDHRNRVFHDFRNGACR
Sbjct: 361 TLFSKLQINQSIIFCNSVNRVELLAKKITELGYSCFYIHAKMLQDHRNRVFHDFRNGACR 420

Query: 421 NLVCTDLFTRGIDIQAVNVVINFDFPKNSETYLHRVGRSGRFGHLGLAVNLITYEDRFNL 480
           NLVCTDLFTRGIDIQAVNVVINFDFPKNSETYLHRVGRSGRFGHLGLAVNLITYEDRFNL
Sbjct: 421 NLVCTDLFTRGIDIQAVNVVINFDFPKNSETYLHRVGRSGRFGHLGLAVNLITYEDRFNL 480

Query: 481 YRIEQELGTEIKQIPPHIDQAIYCR 506
           YRIEQELGTEIKQIPPHIDQAIYCR
Sbjct: 481 YRIEQELGTEIKQIPPHIDQAIYCR 503

[Close]
BLAST of Carg24940 vs. NCBI nr
Match: XP_022974606.1 (DEAD-box ATP-dependent RNA helicase 8-like [Cucurbita maxima])

HSP 1 Score: 941.0 bits (2431), Expect = 1.6e-270
Identity = 503/508 (99.02%), Postives = 504/508 (99.21%), Query Frame = 0 

Query: 1   MNNRGRYPPGIGAGRGGGVNANPSFQSRPHQQQYVQRNLVPNQQ---XXXXXXXXXXXXX 60
           MNNRGRYPPGIGAGRGGGVNANPSFQSRPHQQQYVQRNLVPNQQ   XXXXXXXXXXXXX
Sbjct: 1   MNNRGRYPPGIGAGRGGGVNANPSFQSRPHQQQYVQRNLVPNQQXXXXXXXXXXXXXXXX 60

Query: 61  XXXXXXXXXXXXXXXXLKRNQLGGGPADSNVDEVEKTVQSEAVDSSSQDWKARLKIPPPD 120
           XXXXXXXXXXXXXXX LKRNQLGGGPADSNVDEVEKTVQ+EAVDSSSQDWKARLKIPPPD
Sbjct: 61  XXXXXXXXXXXXXXXWLKRNQLGGGPADSNVDEVEKTVQTEAVDSSSQDWKARLKIPPPD 120

Query: 121 TRYKTEDVTATKGNEFEDYFLKRELLMGIYEKGFERPSPIQEESIPIALTGSDILARAKN 180
           TRYKTEDVTATKGNEFEDYFLKRELLMGIYEKGFERPSPIQEESIPIALTGSDILARAKN
Sbjct: 121 TRYKTEDVTATKGNEFEDYFLKRELLMGIYEKGFERPSPIQEESIPIALTGSDILARAKN 180

Query: 181 GTGKTAAFCIPALEKIDQDNNVIQVVILVPTRELALQTSQVCKELGKNLNIQVMVTTGGT 240
           GTGKTAAFCIPALEKIDQDNNVIQVVILVPTRELALQTSQVCKELGKNLNIQVMVTTGGT
Sbjct: 181 GTGKTAAFCIPALEKIDQDNNVIQVVILVPTRELALQTSQVCKELGKNLNIQVMVTTGGT 240

Query: 241 SLKDDIMRLYQPVHLLVGTPGRILDLAKKGVCVLKDCSMLIMDEADKLLSPEFQPSIEQL 300
           SLKDDIMRLYQPVHLLVGTPGRILDLAKKGVCVLKDCSMLIMDEADKLLSPEFQPSIEQL
Sbjct: 241 SLKDDIMRLYQPVHLLVGTPGRILDLAKKGVCVLKDCSMLIMDEADKLLSPEFQPSIEQL 300

Query: 301 IRFLPANRQVLMYSATFPVTVKDFKDRYLHRPYIINLMDELTLKGITQFYAFVEERQKVH 360
           IRFLPANRQVLMYSATFPVTVKDFKDRYLHRPYIINLMDELTLKGITQFYAFVEERQKVH
Sbjct: 301 IRFLPANRQVLMYSATFPVTVKDFKDRYLHRPYIINLMDELTLKGITQFYAFVEERQKVH 360

Query: 361 CLNTLFSKLQINQSIIFCNSVNRVELLAKKITELGYSCFYIHAKMLQDHRNRVFHDFRNG 420
           CLNTLFSKLQINQSIIFCNSVNRVELLAKKITELGYSCFYIHAKMLQDHRNRVFHDFRNG
Sbjct: 361 CLNTLFSKLQINQSIIFCNSVNRVELLAKKITELGYSCFYIHAKMLQDHRNRVFHDFRNG 420

Query: 421 ACRNLVCTDLFTRGIDIQAVNVVINFDFPKNSETYLHRVGRSGRFGHLGLAVNLITYEDR 480
           ACRNLVCTDLFTRGIDIQAVNVVINFDFPKNSETYLHRVGRSGRFGHLGLAVNLITYEDR
Sbjct: 421 ACRNLVCTDLFTRGIDIQAVNVVINFDFPKNSETYLHRVGRSGRFGHLGLAVNLITYEDR 480

Query: 481 FNLYRIEQELGTEIKQIPPHIDQAIYCR 506
           FNLYRIEQELGTEIKQIPPHIDQAIYCR
Sbjct: 481 FNLYRIEQELGTEIKQIPPHIDQAIYCR 508

[Close]
BLAST of Carg24940 vs. NCBI nr
Match: XP_008438061.1 (PREDICTED: DEAD-box ATP-dependent RNA helicase 8 [Cucumis melo] >XP_008438062.1 PREDICTED: DEAD-box ATP-dependent RNA helicase 8 [Cucumis melo])

HSP 1 Score: 937.6 bits (2422), Expect = 1.8e-269
Identity = 488/505 (96.63%), Postives = 491/505 (97.23%), Query Frame = 0 

Query: 1   MNNRGRYPPGIGAGRGGGVNANPSFQSRPHQQQYVQRNLVPNQQXXXXXXXXXXXXXXXX 60
           MNNRGRYPPGIGAGRGGGVNANPSFQSRPHQQQYVQRNLVPNQ             XXXX
Sbjct: 1   MNNRGRYPPGIGAGRGGGVNANPSFQSRPHQQQYVQRNLVPNQ-------------XXXX 60

Query: 61  XXXXXXXXXXXXXLKRNQLGGGPADSNVDEVEKTVQSEAVDSSSQDWKARLKIPPPDTRY 120
           XXXXXXXXXXXXXLKRNQLGGGPADSNVDEVEKTVQSEAVDSSSQDWKARLKIPPPDTRY
Sbjct: 61  XXXXXXXXXXXXXLKRNQLGGGPADSNVDEVEKTVQSEAVDSSSQDWKARLKIPPPDTRY 120

Query: 121 KTEDVTATKGNEFEDYFLKRELLMGIYEKGFERPSPIQEESIPIALTGSDILARAKNGTG 180
           KTEDVTATKGNEFEDYFLKRELLMGIYEKGFERPSPIQEESIPIALTGSDILARAKNGTG
Sbjct: 121 KTEDVTATKGNEFEDYFLKRELLMGIYEKGFERPSPIQEESIPIALTGSDILARAKNGTG 180

Query: 181 KTAAFCIPALEKIDQDNNVIQVVILVPTRELALQTSQVCKELGKNLNIQVMVTTGGTSLK 240
           KTAAFCIPALEKIDQDNNVIQVVILVPTRELALQTSQVCKELGKNLNIQVMVTTGGTSLK
Sbjct: 181 KTAAFCIPALEKIDQDNNVIQVVILVPTRELALQTSQVCKELGKNLNIQVMVTTGGTSLK 240

Query: 241 DDIMRLYQPVHLLVGTPGRILDLAKKGVCVLKDCSMLIMDEADKLLSPEFQPSIEQLIRF 300
           DDIMRLYQPVHLLVGTPGRILDLAKKGVCVLKDCSMLIMDEADKLLSPEFQPSIE LIRF
Sbjct: 241 DDIMRLYQPVHLLVGTPGRILDLAKKGVCVLKDCSMLIMDEADKLLSPEFQPSIEHLIRF 300

Query: 301 LPANRQVLMYSATFPVTVKDFKDRYLHRPYIINLMDELTLKGITQFYAFVEERQKVHCLN 360
           LPANRQ+LMYSATFPVTVKDFKDRYLH+PY+INLMDELTLKGITQFYAFVEERQKVHCLN
Sbjct: 301 LPANRQILMYSATFPVTVKDFKDRYLHKPYVINLMDELTLKGITQFYAFVEERQKVHCLN 360

Query: 361 TLFSKLQINQSIIFCNSVNRVELLAKKITELGYSCFYIHAKMLQDHRNRVFHDFRNGACR 420
           TLFSKLQINQSIIFCNSVNRVELLAKKITELGYSCFYIHAKMLQDHRNRVFHDFRNGACR
Sbjct: 361 TLFSKLQINQSIIFCNSVNRVELLAKKITELGYSCFYIHAKMLQDHRNRVFHDFRNGACR 420

Query: 421 NLVCTDLFTRGIDIQAVNVVINFDFPKNSETYLHRVGRSGRFGHLGLAVNLITYEDRFNL 480
           NLVCTDLFTRGIDIQAVNVVINFDFPKNSETYLHRVGRSGRFGHLGLAVNLITYEDRFNL
Sbjct: 421 NLVCTDLFTRGIDIQAVNVVINFDFPKNSETYLHRVGRSGRFGHLGLAVNLITYEDRFNL 480

Query: 481 YRIEQELGTEIKQIPPHIDQAIYCR 506
           YRIEQELGTEIKQIPPHIDQAIYCR
Sbjct: 481 YRIEQELGTEIKQIPPHIDQAIYCR 492

[Close]
BLAST of Carg24940 vs. NCBI nr
Match: XP_004133869.1 (PREDICTED: DEAD-box ATP-dependent RNA helicase 8 [Cucumis sativus] >XP_011650758.1 PREDICTED: DEAD-box ATP-dependent RNA helicase 8 [Cucumis sativus])

HSP 1 Score: 936.0 bits (2418), Expect = 5.2e-269
Identity = 487/505 (96.44%), Postives = 490/505 (97.03%), Query Frame = 0 

Query: 1   MNNRGRYPPGIGAGRGGGVNANPSFQSRPHQQQYVQRNLVPNQQXXXXXXXXXXXXXXXX 60
           MNNRGRYPPGIGAGRGGGVNANPSFQSRPHQQQYVQRNLVPNQ             XXXX
Sbjct: 1   MNNRGRYPPGIGAGRGGGVNANPSFQSRPHQQQYVQRNLVPNQ-------------XXXX 60

Query: 61  XXXXXXXXXXXXXLKRNQLGGGPADSNVDEVEKTVQSEAVDSSSQDWKARLKIPPPDTRY 120
           XXXXXXXXXXXXXLKRNQLGGGPADSNVDEVEKTVQSEAVDSSSQDWKARLKIPPPDTRY
Sbjct: 61  XXXXXXXXXXXXXLKRNQLGGGPADSNVDEVEKTVQSEAVDSSSQDWKARLKIPPPDTRY 120

Query: 121 KTEDVTATKGNEFEDYFLKRELLMGIYEKGFERPSPIQEESIPIALTGSDILARAKNGTG 180
           KTEDVTATKGNEFEDYFLKRELLMGIYEKGFERPSPIQEESIPIALTGSDILARAKNGTG
Sbjct: 121 KTEDVTATKGNEFEDYFLKRELLMGIYEKGFERPSPIQEESIPIALTGSDILARAKNGTG 180

Query: 181 KTAAFCIPALEKIDQDNNVIQVVILVPTRELALQTSQVCKELGKNLNIQVMVTTGGTSLK 240
           KTAAFCIPALEKIDQDNNVIQVVILVPTRELALQTSQVCKELGKNLNIQVMVTTGGTSLK
Sbjct: 181 KTAAFCIPALEKIDQDNNVIQVVILVPTRELALQTSQVCKELGKNLNIQVMVTTGGTSLK 240

Query: 241 DDIMRLYQPVHLLVGTPGRILDLAKKGVCVLKDCSMLIMDEADKLLSPEFQPSIEQLIRF 300
           DDIMRLYQPVHLLVGTPGRILDLAKKGVCVLKDCSMLIMDEADKLLSPEFQPSIE LIRF
Sbjct: 241 DDIMRLYQPVHLLVGTPGRILDLAKKGVCVLKDCSMLIMDEADKLLSPEFQPSIEHLIRF 300

Query: 301 LPANRQVLMYSATFPVTVKDFKDRYLHRPYIINLMDELTLKGITQFYAFVEERQKVHCLN 360
           LP NRQ+LMYSATFPVTVKDFKDRYLH+PY+INLMDELTLKGITQFYAFVEERQKVHCLN
Sbjct: 301 LPTNRQILMYSATFPVTVKDFKDRYLHKPYVINLMDELTLKGITQFYAFVEERQKVHCLN 360

Query: 361 TLFSKLQINQSIIFCNSVNRVELLAKKITELGYSCFYIHAKMLQDHRNRVFHDFRNGACR 420
           TLFSKLQINQSIIFCNSVNRVELLAKKITELGYSCFYIHAKMLQDHRNRVFHDFRNGACR
Sbjct: 361 TLFSKLQINQSIIFCNSVNRVELLAKKITELGYSCFYIHAKMLQDHRNRVFHDFRNGACR 420

Query: 421 NLVCTDLFTRGIDIQAVNVVINFDFPKNSETYLHRVGRSGRFGHLGLAVNLITYEDRFNL 480
           NLVCTDLFTRGIDIQAVNVVINFDFPKNSETYLHRVGRSGRFGHLGLAVNLITYEDRFNL
Sbjct: 421 NLVCTDLFTRGIDIQAVNVVINFDFPKNSETYLHRVGRSGRFGHLGLAVNLITYEDRFNL 480

Query: 481 YRIEQELGTEIKQIPPHIDQAIYCR 506
           YRIEQELGTEIKQIPPHIDQAIYCR
Sbjct: 481 YRIEQELGTEIKQIPPHIDQAIYCR 492

[Close]
BLAST of Carg24940 vs. NCBI nr
Match: KGN56528.1 (Dead box ATP-dependent RNA helicase [Cucumis sativus])

HSP 1 Score: 936.0 bits (2418), Expect = 5.2e-269
Identity = 487/505 (96.44%), Postives = 490/505 (97.03%), Query Frame = 0 

Query: 1   MNNRGRYPPGIGAGRGGGVNANPSFQSRPHQQQYVQRNLVPNQQXXXXXXXXXXXXXXXX 60
           MNNRGRYPPGIGAGRGGGVNANPSFQSRPHQQQYVQRNLVPNQ             XXXX
Sbjct: 1   MNNRGRYPPGIGAGRGGGVNANPSFQSRPHQQQYVQRNLVPNQ-------------XXXX 60

Query: 61  XXXXXXXXXXXXXLKRNQLGGGPADSNVDEVEKTVQSEAVDSSSQDWKARLKIPPPDTRY 120
           XXXXXXXXXXXXXLKRNQLGGGPADSNVDEVEKTVQSEAVDSSSQDWKARLKIPPPDTRY
Sbjct: 61  XXXXXXXXXXXXXLKRNQLGGGPADSNVDEVEKTVQSEAVDSSSQDWKARLKIPPPDTRY 120

Query: 121 KTEDVTATKGNEFEDYFLKRELLMGIYEKGFERPSPIQEESIPIALTGSDILARAKNGTG 180
           KTEDVTATKGNEFEDYFLKRELLMGIYEKGFERPSPIQEESIPIALTGSDILARAKNGTG
Sbjct: 121 KTEDVTATKGNEFEDYFLKRELLMGIYEKGFERPSPIQEESIPIALTGSDILARAKNGTG 180

Query: 181 KTAAFCIPALEKIDQDNNVIQVVILVPTRELALQTSQVCKELGKNLNIQVMVTTGGTSLK 240
           KTAAFCIPALEKIDQDNNVIQVVILVPTRELALQTSQVCKELGKNLNIQVMVTTGGTSLK
Sbjct: 181 KTAAFCIPALEKIDQDNNVIQVVILVPTRELALQTSQVCKELGKNLNIQVMVTTGGTSLK 240

Query: 241 DDIMRLYQPVHLLVGTPGRILDLAKKGVCVLKDCSMLIMDEADKLLSPEFQPSIEQLIRF 300
           DDIMRLYQPVHLLVGTPGRILDLAKKGVCVLKDCSMLIMDEADKLLSPEFQPSIE LIRF
Sbjct: 241 DDIMRLYQPVHLLVGTPGRILDLAKKGVCVLKDCSMLIMDEADKLLSPEFQPSIEHLIRF 300

Query: 301 LPANRQVLMYSATFPVTVKDFKDRYLHRPYIINLMDELTLKGITQFYAFVEERQKVHCLN 360
           LP NRQ+LMYSATFPVTVKDFKDRYLH+PY+INLMDELTLKGITQFYAFVEERQKVHCLN
Sbjct: 301 LPTNRQILMYSATFPVTVKDFKDRYLHKPYVINLMDELTLKGITQFYAFVEERQKVHCLN 360

Query: 361 TLFSKLQINQSIIFCNSVNRVELLAKKITELGYSCFYIHAKMLQDHRNRVFHDFRNGACR 420
           TLFSKLQINQSIIFCNSVNRVELLAKKITELGYSCFYIHAKMLQDHRNRVFHDFRNGACR
Sbjct: 361 TLFSKLQINQSIIFCNSVNRVELLAKKITELGYSCFYIHAKMLQDHRNRVFHDFRNGACR 420

Query: 421 NLVCTDLFTRGIDIQAVNVVINFDFPKNSETYLHRVGRSGRFGHLGLAVNLITYEDRFNL 480
           NLVCTDLFTRGIDIQAVNVVINFDFPKNSETYLHRVGRSGRFGHLGLAVNLITYEDRFNL
Sbjct: 421 NLVCTDLFTRGIDIQAVNVVINFDFPKNSETYLHRVGRSGRFGHLGLAVNLITYEDRFNL 480

Query: 481 YRIEQELGTEIKQIPPHIDQAIYCR 506
           YRIEQELGTEIKQIPPHIDQAIYCR
Sbjct: 481 YRIEQELGTEIKQIPPHIDQAIYCR 492

[Close]
BLAST of Carg24940 vs. TAIR10
Match: AT4G00660.2 (RNAhelicase-like 8)

HSP 1 Score: 823.5 bits (2126), Expect = 6.9e-239
Identity = 442/506 (87.35%), Postives = 468/506 (92.49%), Query Frame = 0 

Query: 1   MNNRGRYPPGIGAGRGGGVNANPSFQSRPHQQQYVQRNLVPNQQXXXXXXXXXXXXXXXX 60
           MNNRGRYPPGIGAGR G  N NP++QSR   QQ+          XXXXXXXXXXXXXXXX
Sbjct: 1   MNNRGRYPPGIGAGR-GAFNPNPNYQSRSGYQQHXXXXXXXXXXXXXXXXXXXXXXXXXX 60

Query: 61  XXXXXXXXXXXXXLKRNQLGGGPADSN-VDEVEKTVQSEAVDSSSQDWKARLKIPPPDTR 120
           XXXXXXXXXXXX L+R Q+ GG ++ + V EVEKTVQSE +D +S+DWKARLK+P PDTR
Sbjct: 61  XXXXXXXXXXXXWLRRGQIPGGNSNGDAVVEVEKTVQSEVIDPNSEDWKARLKLPAPDTR 120

Query: 121 YKTEDVTATKGNEFEDYFLKRELLMGIYEKGFERPSPIQEESIPIALTGSDILARAKNGT 180
           Y+TEDVTATKGNEFEDYFLKRELLMGIYEKGFERPSPIQEESIPIALTG DILARAKNGT
Sbjct: 121 YRTEDVTATKGNEFEDYFLKRELLMGIYEKGFERPSPIQEESIPIALTGRDILARAKNGT 180

Query: 181 GKTAAFCIPALEKIDQDNNVIQVVILVPTRELALQTSQVCKELGKNLNIQVMVTTGGTSL 240
           GKTAAFCIP LEKIDQDNNVIQ VI+VPTRELALQTSQVCKELGK+L IQVMVTTGGTSL
Sbjct: 181 GKTAAFCIPVLEKIDQDNNVIQAVIIVPTRELALQTSQVCKELGKHLKIQVMVTTGGTSL 240

Query: 241 KDDIMRLYQPVHLLVGTPGRILDLAKKGVCVLKDCSMLIMDEADKLLSPEFQPSIEQLIR 300
           KDDIMRLYQPVHLLVGTPGRILDL KKGVCVLKDCS+L+MDEADKLLS EFQPS+E LI 
Sbjct: 241 KDDIMRLYQPVHLLVGTPGRILDLTKKGVCVLKDCSVLVMDEADKLLSQEFQPSVEHLIS 300

Query: 301 FLPANRQVLMYSATFPVTVKDFKDRYLHRPYIINLMDELTLKGITQFYAFVEERQKVHCL 360
           FLP +RQ+LM+SATFPVTVKDFKDR+L  PY+INLMDELTLKGITQFYAFVEERQK+HCL
Sbjct: 301 FLPESRQILMFSATFPVTVKDFKDRFLTNPYVINLMDELTLKGITQFYAFVEERQKIHCL 360

Query: 361 NTLFSKLQINQSIIFCNSVNRVELLAKKITELGYSCFYIHAKMLQDHRNRVFHDFRNGAC 420
           NTLFSKLQINQSIIFCNSVNRVELLAKKITELGYSCFYIHAKMLQDHRNRVFHDFRNGAC
Sbjct: 361 NTLFSKLQINQSIIFCNSVNRVELLAKKITELGYSCFYIHAKMLQDHRNRVFHDFRNGAC 420

Query: 421 RNLVCTDLFTRGIDIQAVNVVINFDFPKNSETYLHRVGRSGRFGHLGLAVNLITYEDRFN 480
           RNLVCTDLFTRGIDIQAVNVVINFDFPKN+ETYLHRVGRSGRFGHLGLAVNLITYEDRFN
Sbjct: 421 RNLVCTDLFTRGIDIQAVNVVINFDFPKNAETYLHRVGRSGRFGHLGLAVNLITYEDRFN 480

Query: 481 LYRIEQELGTEIKQIPPHIDQAIYCR 506
           LYRIEQELGTEIKQIPPHIDQAIYC+
Sbjct: 481 LYRIEQELGTEIKQIPPHIDQAIYCQ 505

[Close]
BLAST of Carg24940 vs. TAIR10
Match: AT2G45810.1 (DEA(D/H)-box RNA helicase family protein)

HSP 1 Score: 753.1 bits (1943), Expect = 1.1e-217
Identity = 371/432 (85.88%), Postives = 403/432 (93.29%), Query Frame = 0 

Query: 75  KRNQLGGGPADSNVDEVEKTVQSEAV-DSSSQDWKARLKIPPPDTRYKTEDVTATKGNEF 134
           +R QL G P  S +DEVEKTVQSEA+ DS+++DWKA LK+PP D RY+TEDVTATKGNEF
Sbjct: 99  RRAQLPGDP--SYIDEVEKTVQSEAISDSNNEDWKATLKLPPRDNRYQTEDVTATKGNEF 158

Query: 135 EDYFLKRELLMGIYEKGFERPSPIQEESIPIALTGSDILARAKNGTGKTAAFCIPALEKI 194
           EDYFLKR+LL GIYEKGFE+PSPIQEESIPIALTGSDILARAKNGTGKT AFCIP LEKI
Sbjct: 159 EDYFLKRDLLRGIYEKGFEKPSPIQEESIPIALTGSDILARAKNGTGKTGAFCIPTLEKI 218

Query: 195 DQDNNVIQVVILVPTRELALQTSQVCKELGKNLNIQVMVTTGGTSLKDDIMRLYQPVHLL 254
           D +NNVIQ VILVPTRELALQTSQVCKEL K L I+VMVTTGGTSL+DDIMRLYQPVHLL
Sbjct: 219 DPENNVIQAVILVPTRELALQTSQVCKELSKYLKIEVMVTTGGTSLRDDIMRLYQPVHLL 278

Query: 255 VGTPGRILDLAKKGVCVLKDCSMLIMDEADKLLSPEFQPSIEQLIRFLPANRQVLMYSAT 314
           VGTPGRILDLAKKGVCVLKDC+ML+MDEADKLLS EFQPSIE+LI+FLP +RQ+LM+SAT
Sbjct: 279 VGTPGRILDLAKKGVCVLKDCAMLVMDEADKLLSVEFQPSIEELIQFLPESRQILMFSAT 338

Query: 315 FPVTVKDFKDRYLHRPYIINLMDELTLKGITQFYAFVEERQKVHCLNTLFSKLQINQSII 374
           FPVTVK FKDRYL +PYIINLMD+LTL G+TQ+YAFVEERQKVHCLNTLFSKLQINQSII
Sbjct: 339 FPVTVKSFKDRYLKKPYIINLMDQLTLMGVTQYYAFVEERQKVHCLNTLFSKLQINQSII 398

Query: 375 FCNSVNRVELLAKKITELGYSCFYIHAKMLQDHRNRVFHDFRNGACRNLVCTDLFTRGID 434
           FCNSVNRVELLAKKITELGYSCFYIHAKM+QDHRNRVFHDFRNGACRNLVCTDLFTRGID
Sbjct: 399 FCNSVNRVELLAKKITELGYSCFYIHAKMVQDHRNRVFHDFRNGACRNLVCTDLFTRGID 458

Query: 435 IQAVNVVINFDFPKNSETYLHRVGRSGRFGHLGLAVNLITYEDRFNLYRIEQELGTEIKQ 494
           IQAVNVVINFDFP+ SE+YLHRVGRSGRFGHLGLAVNL+TYEDRF +Y+ EQELGTEIK 
Sbjct: 459 IQAVNVVINFDFPRTSESYLHRVGRSGRFGHLGLAVNLVTYEDRFKMYQTEQELGTEIKP 518

Query: 495 IPPHIDQAIYCR 506
           IP  ID+AIYC+
Sbjct: 519 IPSLIDKAIYCQ 528

[Close]
BLAST of Carg24940 vs. TAIR10
Match: AT3G61240.1 (DEA(D/H)-box RNA helicase family protein)

HSP 1 Score: 751.9 bits (1940), Expect = 2.5e-217
Identity = 402/510 (78.82%), Postives = 442/510 (86.67%), Query Frame = 0 

Query: 3   NRGRYPPGIGAGRGGGVNANPSF------QSRPHQQQYVQRNLVPNQQXXXXXXXXXXXX 62
           NRGRYPPG+G GR  G   NP +      Q  P  QQYVQR       XXXXXXXXXXXX
Sbjct: 4   NRGRYPPGVGTGR--GAPPNPDYHQSYRQQQPPQDQQYVQRGYXXXXXXXXXXXXXXXXX 63

Query: 63  XXXXXXXXXXXXXXXXXLKRNQLGGGPADSNVDEVEKTVQSEA-VDSSSQDWKARLKIPP 122
           XXXXXXXX             QL G  +++N + V++T Q EA  D++ QDWKA L++PP
Sbjct: 64  XXXXXXXXP------------QLPGNASNAN-EVVQQTTQPEASSDANGQDWKATLRLPP 123

Query: 123 PDTRYKTEDVTATKGNEFEDYFLKRELLMGIYEKGFERPSPIQEESIPIALTGSDILARA 182
           PDTRY+T DVTATKGNEFEDYFLKR+LL GIYEKGFE+PSPIQEESIPIALTGSDILARA
Sbjct: 124 PDTRYQTADVTATKGNEFEDYFLKRDLLKGIYEKGFEKPSPIQEESIPIALTGSDILARA 183

Query: 183 KNGTGKTAAFCIPALEKIDQDNNVIQVVILVPTRELALQTSQVCKELGKNLNIQVMVTTG 242
           KNGTGKT AFCIP LEKID +NNVIQ +ILVPTRELALQTSQVCKEL K LNIQVMVTTG
Sbjct: 184 KNGTGKTGAFCIPVLEKIDPNNNVIQAMILVPTRELALQTSQVCKELSKYLNIQVMVTTG 243

Query: 243 GTSLKDDIMRLYQPVHLLVGTPGRILDLAKKGVCVLKDCSMLIMDEADKLLSPEFQPSIE 302
           GTSL+DDIMRL+QPVHLLVGTPGRILDL KKGVCVLKDC+ML+MDEADKLLS EFQPS+E
Sbjct: 244 GTSLRDDIMRLHQPVHLLVGTPGRILDLTKKGVCVLKDCAMLVMDEADKLLSAEFQPSLE 303

Query: 303 QLIRFLPANRQVLMYSATFPVTVKDFKDRYLHRPYIINLMDELTLKGITQFYAFVEERQK 362
           +LI+FLP NRQ LM+SATFPVTVK FKDR+L +PY+INLMD+LTL G+TQ+YAFVEERQK
Sbjct: 304 ELIQFLPQNRQFLMFSATFPVTVKAFKDRHLRKPYVINLMDQLTLMGVTQYYAFVEERQK 363

Query: 363 VHCLNTLFSKLQINQSIIFCNSVNRVELLAKKITELGYSCFYIHAKMLQDHRNRVFHDFR 422
           VHCLNTLFSKLQINQSIIFCNSVNRVELLAKKITELGYSCFYIHAKM+QDHRNRVFH+FR
Sbjct: 364 VHCLNTLFSKLQINQSIIFCNSVNRVELLAKKITELGYSCFYIHAKMVQDHRNRVFHEFR 423

Query: 423 NGACRNLVCTDLFTRGIDIQAVNVVINFDFPKNSETYLHRVGRSGRFGHLGLAVNLITYE 482
           NGACRNLVCTDLFTRGIDIQAVNVVINFDFP+ SE+YLHRVGRSGRFGHLGLAVNL+TYE
Sbjct: 424 NGACRNLVCTDLFTRGIDIQAVNVVINFDFPRTSESYLHRVGRSGRFGHLGLAVNLVTYE 483

Query: 483 DRFNLYRIEQELGTEIKQIPPHIDQAIYCR 506
           DRF +Y+ EQELGTEIK IP +IDQAIYC+
Sbjct: 484 DRFKMYQTEQELGTEIKPIPSNIDQAIYCQ 498

[Close]
BLAST of Carg24940 vs. TAIR10
Match: AT3G19760.1 (eukaryotic initiation factor 4A-III)

HSP 1 Score: 290.8 bits (743), Expect = 1.6e-78
Identity = 146/372 (39.25%), Postives = 232/372 (62.37%), Query Frame = 0 

Query: 133 FEDYFLKRELLMGIYEKGFERPSPIQEESIPIALTGSDILARAKNGTGKTAAFCIPALEK 192
           F D  +K ++L G+YE GFE+PS IQ+ ++   L G D++A+A++GTGKT+   +   + 
Sbjct: 37  FNDMGIKEDVLRGVYEYGFEKPSAIQQRAVMPILQGRDVIAQAQSGTGKTSMIALSVCQV 96

Query: 193 IDQDNNVIQVVILVPTRELALQTSQVCKELGKNLNIQVMVTTGGTSLKDDIMRLYQPVHL 252
           +D  +  +Q +IL PTRELA QT +  + +G + NIQ     GG S+ +DI +L   VH+
Sbjct: 97  VDTSSREVQALILSPTRELATQTEKTIQAIGLHANIQAHACIGGNSVGEDIRKLEHGVHV 156

Query: 253 LVGTPGRILDLAKKGVCVLKDCSMLIMDEADKLLSPEFQPSIEQLIRFLPANRQVLMYSA 312
           + GTPGR+ D+ K+     +   +LI+DE+D++LS  F+  I  + R+LP + QV + SA
Sbjct: 157 VSGTPGRVCDMIKRRSLRTRAIKLLILDESDEMLSRGFKDQIYDVYRYLPPDLQVCLVSA 216

Query: 313 TFPVTVKDFKDRYLHRPY-IINLMDELTLKGITQFYAFVE-ERQKVHCLNTLFSKLQINQ 372
           T P  + +   +++  P  I+   DELTL+GI QF+  VE E  K   L  L+  L I Q
Sbjct: 217 TLPHEILEMTSKFMTEPVKILVKRDELTLEGIKQFFVAVEKEEWKFDTLCDLYDTLTITQ 276

Query: 373 SIIFCNSVNRVELLAKKITELGYSCFYIHAKMLQDHRNRVFHDFRNGACRNLVCTDLFTR 432
           ++IFCN+  +V+ L++K+    ++   +H  M Q  R+ + ++FR+G  R L+ TD++ R
Sbjct: 277 AVIFCNTKRKVDYLSEKMRSHNFTVSSMHGDMPQKERDAIMNEFRSGDSRVLITTDVWAR 336

Query: 433 GIDIQAVNVVINFDFPKNSETYLHRVGRSGRFGHLGLAVNLITYEDRFNLYRIEQELGTE 492
           GID+Q V++VIN+D P N E Y+HR+GRSGRFG  G+A+N +  +D   L  IEQ   T+
Sbjct: 337 GIDVQQVSLVINYDLPNNRELYIHRIGRSGRFGRKGVAINFVKSDDIKILRDIEQYYSTQ 396

Query: 493 IKQIPPHIDQAI 503
           I ++P ++   I
Sbjct: 397 IDEMPMNVADLI 408

[Close]
BLAST of Carg24940 vs. TAIR10
Match: AT1G72730.1 (DEA(D/H)-box RNA helicase family protein)

HSP 1 Score: 275.0 bits (702), Expect = 9.1e-74
Identity = 145/370 (39.19%), Postives = 224/370 (60.54%), Query Frame = 0 

Query: 131 NEFEDYFLKRELLMGIYEKGFERPSPIQEESIPIALTGSDILARAKNGTGKTAAFCIPAL 190
           + F+   L+ +LL GIY  GFE+PS IQ+  I     G D++ +A++GTGKTA FC   L
Sbjct: 41  DSFDAMELQPDLLRGIYAYGFEKPSAIQQRGIIPFCKGLDVIQQAQSGTGKTATFCSGVL 100

Query: 191 EKIDQDNNVIQVVILVPTRELALQTSQVCKELGKNLNIQVMVTTGGTSLKDDIMRLYQPV 250
           +++D      Q ++L PTRELA Q  +V + LG  L ++     GGTS+++D   L   V
Sbjct: 101 QQLDISLVQCQALVLAPTRELAQQIEKVMRALGDYLGVKAQACVGGTSVREDQRVLQSGV 160

Query: 251 HLLVGTPGRILDLAKKGVCVLKDCSMLIMDEADKLLSPEFQPSIEQLIRFLPANRQVLMY 310
           H++VGTPGR+ DL ++         M ++DEAD++LS  F+  I  + + LP+  QV ++
Sbjct: 161 HVVVGTPGRVFDLLRRQSLRADAIKMFVLDEADEMLSRGFKDQIYDIFQLLPSKVQVGVF 220

Query: 311 SATFPVTVKDFKDRYLHRPY-IINLMDELTLKGITQFYAFVE-ERQKVHCLNTLFSKLQI 370
           SAT P    +   +++++P  I+   DELTL+GI QFY  V+ E  K+  L  L+  L I
Sbjct: 221 SATMPPEALEITRKFMNKPVRILVKRDELTLEGIKQFYVNVDKEEWKLETLCDLYETLAI 280

Query: 371 NQSIIFCNSVNRVELLAKKITELGYSCFYIHAKMLQDHRNRVFHDFRNGACRNLVCTDLF 430
            QS+IF N+  +V+ L  K+    ++    H  M Q+ R+ +  +FR+G+ R L+ TDL 
Sbjct: 281 TQSVIFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLL 340

Query: 431 TRGIDIQAVNVVINFDFPKNSETYLHRVGRSGRFGHLGLAVNLITYEDRFNLYRIEQELG 490
            RGID+Q V++VINFD P   E YLHR+GRSGRFG  G+A+N +T ED   +  I++   
Sbjct: 341 ARGIDVQQVSLVINFDLPTQPENYLHRIGRSGRFGRKGVAINFMTSEDERMMADIQRFYN 400

Query: 491 TEIKQIPPHI 499
             ++++P ++
Sbjct: 401 VVVEELPSNV 410

[Close]
BLAST of Carg24940 vs. Swiss-Prot
Match: sp|Q8RXK6|RH8_ARATH (DEAD-box ATP-dependent RNA helicase 8 OS=Arabidopsis thaliana OX=3702 GN=RH8 PE=2 SV=1)

HSP 1 Score: 823.5 bits (2126), Expect = 1.2e-237
Identity = 442/506 (87.35%), Postives = 468/506 (92.49%), Query Frame = 0 

Query: 1   MNNRGRYPPGIGAGRGGGVNANPSFQSRPHQQQYVQRNLVPNQQXXXXXXXXXXXXXXXX 60
           MNNRGRYPPGIGAGR G  N NP++QSR   QQ+          XXXXXXXXXXXXXXXX
Sbjct: 1   MNNRGRYPPGIGAGR-GAFNPNPNYQSRSGYQQHXXXXXXXXXXXXXXXXXXXXXXXXXX 60

Query: 61  XXXXXXXXXXXXXLKRNQLGGGPADSN-VDEVEKTVQSEAVDSSSQDWKARLKIPPPDTR 120
           XXXXXXXXXXXX L+R Q+ GG ++ + V EVEKTVQSE +D +S+DWKARLK+P PDTR
Sbjct: 61  XXXXXXXXXXXXWLRRGQIPGGNSNGDAVVEVEKTVQSEVIDPNSEDWKARLKLPAPDTR 120

Query: 121 YKTEDVTATKGNEFEDYFLKRELLMGIYEKGFERPSPIQEESIPIALTGSDILARAKNGT 180
           Y+TEDVTATKGNEFEDYFLKRELLMGIYEKGFERPSPIQEESIPIALTG DILARAKNGT
Sbjct: 121 YRTEDVTATKGNEFEDYFLKRELLMGIYEKGFERPSPIQEESIPIALTGRDILARAKNGT 180

Query: 181 GKTAAFCIPALEKIDQDNNVIQVVILVPTRELALQTSQVCKELGKNLNIQVMVTTGGTSL 240
           GKTAAFCIP LEKIDQDNNVIQ VI+VPTRELALQTSQVCKELGK+L IQVMVTTGGTSL
Sbjct: 181 GKTAAFCIPVLEKIDQDNNVIQAVIIVPTRELALQTSQVCKELGKHLKIQVMVTTGGTSL 240

Query: 241 KDDIMRLYQPVHLLVGTPGRILDLAKKGVCVLKDCSMLIMDEADKLLSPEFQPSIEQLIR 300
           KDDIMRLYQPVHLLVGTPGRILDL KKGVCVLKDCS+L+MDEADKLLS EFQPS+E LI 
Sbjct: 241 KDDIMRLYQPVHLLVGTPGRILDLTKKGVCVLKDCSVLVMDEADKLLSQEFQPSVEHLIS 300

Query: 301 FLPANRQVLMYSATFPVTVKDFKDRYLHRPYIINLMDELTLKGITQFYAFVEERQKVHCL 360
           FLP +RQ+LM+SATFPVTVKDFKDR+L  PY+INLMDELTLKGITQFYAFVEERQK+HCL
Sbjct: 301 FLPESRQILMFSATFPVTVKDFKDRFLTNPYVINLMDELTLKGITQFYAFVEERQKIHCL 360

Query: 361 NTLFSKLQINQSIIFCNSVNRVELLAKKITELGYSCFYIHAKMLQDHRNRVFHDFRNGAC 420
           NTLFSKLQINQSIIFCNSVNRVELLAKKITELGYSCFYIHAKMLQDHRNRVFHDFRNGAC
Sbjct: 361 NTLFSKLQINQSIIFCNSVNRVELLAKKITELGYSCFYIHAKMLQDHRNRVFHDFRNGAC 420

Query: 421 RNLVCTDLFTRGIDIQAVNVVINFDFPKNSETYLHRVGRSGRFGHLGLAVNLITYEDRFN 480
           RNLVCTDLFTRGIDIQAVNVVINFDFPKN+ETYLHRVGRSGRFGHLGLAVNLITYEDRFN
Sbjct: 421 RNLVCTDLFTRGIDIQAVNVVINFDFPKNAETYLHRVGRSGRFGHLGLAVNLITYEDRFN 480

Query: 481 LYRIEQELGTEIKQIPPHIDQAIYCR 506
           LYRIEQELGTEIKQIPPHIDQAIYC+
Sbjct: 481 LYRIEQELGTEIKQIPPHIDQAIYCQ 505

[Close]
BLAST of Carg24940 vs. Swiss-Prot
Match: sp|Q7XMK8|RH6_ORYSJ (DEAD-box ATP-dependent RNA helicase 6 OS=Oryza sativa subsp. japonica OX=39947 GN=Os04g0533000 PE=2 SV=1)

HSP 1 Score: 778.5 bits (2009), Expect = 4.6e-224
Identity = 382/432 (88.43%), Postives = 411/432 (95.14%), Query Frame = 0 

Query: 74  LKRNQLGGGPADSNVDEVEKTVQSEAVDSSSQDWKARLKIPPPDTRYKTEDVTATKGNEF 133
           L+RNQ+    A ++  E +    ++ +DSSSQDWKA+LK+PP DTRY+TEDVTATKGNEF
Sbjct: 69  LRRNQIAAEAAGAS--EQKAPPVADGIDSSSQDWKAQLKLPPQDTRYRTEDVTATKGNEF 128

Query: 134 EDYFLKRELLMGIYEKGFERPSPIQEESIPIALTGSDILARAKNGTGKTAAFCIPALEKI 193
           EDYFLKRELLMGIYEKGFERPSPIQEESIPIALTGSDILARAKNGTGKTAAFCIPALEKI
Sbjct: 129 EDYFLKRELLMGIYEKGFERPSPIQEESIPIALTGSDILARAKNGTGKTAAFCIPALEKI 188

Query: 194 DQDNNVIQVVILVPTRELALQTSQVCKELGKNLNIQVMVTTGGTSLKDDIMRLYQPVHLL 253
           DQD N IQVVILVPTRELALQTSQVCKELGK+L IQVMVTTGGTSLKDDI+RLYQPVHLL
Sbjct: 189 DQDKNAIQVVILVPTRELALQTSQVCKELGKHLKIQVMVTTGGTSLKDDIVRLYQPVHLL 248

Query: 254 VGTPGRILDLAKKGVCVLKDCSMLIMDEADKLLSPEFQPSIEQLIRFLPANRQVLMYSAT 313
           VGTPGRILDL KKGVCVLK+CSML+MDEADKLLSPEFQPSI++LIR+LP+NRQ+LM+SAT
Sbjct: 249 VGTPGRILDLTKKGVCVLKNCSMLVMDEADKLLSPEFQPSIQELIRYLPSNRQILMFSAT 308

Query: 314 FPVTVKDFKDRYLHRPYIINLMDELTLKGITQFYAFVEERQKVHCLNTLFSKLQINQSII 373
           FPVTVK+FKD+YL +PY+INLMDELTLKGITQFYAFVEERQKVHCLNTLFSKLQINQSII
Sbjct: 309 FPVTVKEFKDKYLPKPYVINLMDELTLKGITQFYAFVEERQKVHCLNTLFSKLQINQSII 368

Query: 374 FCNSVNRVELLAKKITELGYSCFYIHAKMLQDHRNRVFHDFRNGACRNLVCTDLFTRGID 433
           FCNSVNRVELLAKKITELGYSCFYIHAKMLQDHRNRVFHDFRNGACRNLVCTDLFTRGID
Sbjct: 369 FCNSVNRVELLAKKITELGYSCFYIHAKMLQDHRNRVFHDFRNGACRNLVCTDLFTRGID 428

Query: 434 IQAVNVVINFDFPKNSETYLHRVGRSGRFGHLGLAVNLITYEDRFNLYRIEQELGTEIKQ 493
           IQAVNVVINFDFPK++ETYLHRVGRSGRFGHLGLAVNLITYEDRFNLYRIEQELGTEIK 
Sbjct: 429 IQAVNVVINFDFPKSAETYLHRVGRSGRFGHLGLAVNLITYEDRFNLYRIEQELGTEIKP 488

Query: 494 IPPHIDQAIYCR 506
           IPP ID+AIYC+
Sbjct: 489 IPPQIDRAIYCQ 498

[Close]
BLAST of Carg24940 vs. Swiss-Prot
Match: sp|Q6H7S2|RH8_ORYSJ (DEAD-box ATP-dependent RNA helicase 8 OS=Oryza sativa subsp. japonica OX=39947 GN=Os02g0641800 PE=2 SV=2)

HSP 1 Score: 775.4 bits (2001), Expect = 3.9e-223
Identity = 423/508 (83.27%), Postives = 449/508 (88.39%), Query Frame = 0 

Query: 1   MNNRGRYPPGIGAGRGGGVNANPSFQSRPHQQQYVQRNLVPNQQXXXXXXXXXXXXXXXX 60
           M+ R RYPPGIG GRGG  N                        XXXXXXXXXXXXXXXX
Sbjct: 1   MDPRARYPPGIGNGRGGNPNYXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 60

Query: 61  XXXXXXXXXXXXXLK---RNQLGGGPADSNVDEVEKTVQSEAVDSSSQDWKARLKIPPPD 120
           XXXXXXXXXXXXX       +  G   +S    V ++   + +DSSSQDWKA+LK+PP D
Sbjct: 61  XXXXXXXXXXXXXXXXQIAREAAGTDRNSEPKAVAQSPAVDGIDSSSQDWKAQLKLPPQD 120

Query: 121 TRYKTEDVTATKGNEFEDYFLKRELLMGIYEKGFERPSPIQEESIPIALTGSDILARAKN 180
           TRY+TEDVTATKGNEFEDYFLKRELLMGIYEKGFERPSPIQEESIPIALTGSDILARAKN
Sbjct: 121 TRYRTEDVTATKGNEFEDYFLKRELLMGIYEKGFERPSPIQEESIPIALTGSDILARAKN 180

Query: 181 GTGKTAAFCIPALEKIDQDNNVIQVVILVPTRELALQTSQVCKELGKNLNIQVMVTTGGT 240
           GTGKTAAFCIPALEKIDQ+ N IQVVILVPTRELALQTSQVCKELGK+L IQVMVTTGGT
Sbjct: 181 GTGKTAAFCIPALEKIDQEKNAIQVVILVPTRELALQTSQVCKELGKHLKIQVMVTTGGT 240

Query: 241 SLKDDIMRLYQPVHLLVGTPGRILDLAKKGVCVLKDCSMLIMDEADKLLSPEFQPSIEQL 300
           SLKDDI+RLYQPVHLLVGTPGRILDL KKG+C+LKDCSMLIMDEADKLLSPEFQPS+EQL
Sbjct: 241 SLKDDIIRLYQPVHLLVGTPGRILDLTKKGICILKDCSMLIMDEADKLLSPEFQPSVEQL 300

Query: 301 IRFLPANRQVLMYSATFPVTVKDFKDRYLHRPYIINLMDELTLKGITQFYAFVEERQKVH 360
           IR+LPA+RQ+LM+SATFPVTVK+FKD+YL +PY+INLMDELTLKGITQFYAFVEERQKVH
Sbjct: 301 IRYLPASRQILMFSATFPVTVKEFKDKYLPKPYVINLMDELTLKGITQFYAFVEERQKVH 360

Query: 361 CLNTLFSKLQINQSIIFCNSVNRVELLAKKITELGYSCFYIHAKMLQDHRNRVFHDFRNG 420
           CLNTLFSKLQINQSIIFCNSVNRVELLAKKITELGYSCFYIHAKMLQDHRNRVFHDFRNG
Sbjct: 361 CLNTLFSKLQINQSIIFCNSVNRVELLAKKITELGYSCFYIHAKMLQDHRNRVFHDFRNG 420

Query: 421 ACRNLVCTDLFTRGIDIQAVNVVINFDFPKNSETYLHRVGRSGRFGHLGLAVNLITYEDR 480
           ACRNLVCTDLFTRGIDIQAVNVVINFDFPK +ETYLHRVGRSGRFGHLGLAVNLITYEDR
Sbjct: 421 ACRNLVCTDLFTRGIDIQAVNVVINFDFPKTAETYLHRVGRSGRFGHLGLAVNLITYEDR 480

Query: 481 FNLYRIEQELGTEIKQIPPHIDQAIYCR 506
           FNLYRIEQELGTEIK IPP IDQAIYC+
Sbjct: 481 FNLYRIEQELGTEIKPIPPQIDQAIYCQ 508

[Close]
BLAST of Carg24940 vs. Swiss-Prot
Match: sp|Q109G2|RH12_ORYSJ (DEAD-box ATP-dependent RNA helicase 12 OS=Oryza sativa subsp. japonica OX=39947 GN=Os10g0503700 PE=2 SV=2)

HSP 1 Score: 773.5 bits (1996), Expect = 1.5e-222
Identity = 378/410 (92.20%), Postives = 396/410 (96.59%), Query Frame = 0 

Query: 96  QSEAVDSSSQDWKARLKIPPPDTRYKTEDVTATKGNEFEDYFLKRELLMGIYEKGFERPS 155
           Q EAVDSSS+DWKA+L +P PDTRY+TEDVTATKGNEFEDYFLKRELLMGIYEKGFERPS
Sbjct: 112 QLEAVDSSSEDWKAQLNLPAPDTRYRTEDVTATKGNEFEDYFLKRELLMGIYEKGFERPS 171

Query: 156 PIQEESIPIALTGSDILARAKNGTGKTAAFCIPALEKIDQDNNVIQVVILVPTRELALQT 215
           PIQEESIPIALTGSDILARAKNGTGKTAAFCIPALEKID + N IQVVILVPTRELALQT
Sbjct: 172 PIQEESIPIALTGSDILARAKNGTGKTAAFCIPALEKIDPEKNAIQVVILVPTRELALQT 231

Query: 216 SQVCKELGKNLNIQVMVTTGGTSLKDDIMRLYQPVHLLVGTPGRILDLAKKGVCVLKDCS 275
           SQVCKELGK LNIQVMV+TGGTSLKDDIMRLYQPVHLLVGTPGRILDL +KG+CVLKDCS
Sbjct: 232 SQVCKELGKYLNIQVMVSTGGTSLKDDIMRLYQPVHLLVGTPGRILDLTRKGICVLKDCS 291

Query: 276 MLIMDEADKLLSPEFQPSIEQLIRFLPANRQVLMYSATFPVTVKDFKDRYLHRPYIINLM 335
           ML+MDEADKLL+PEFQPSIEQLI FLPANRQ+LM+SATFPVTVKDFK++YL RPY+INLM
Sbjct: 292 MLVMDEADKLLAPEFQPSIEQLIHFLPANRQLLMFSATFPVTVKDFKEKYLPRPYVINLM 351

Query: 336 DELTLKGITQFYAFVEERQKVHCLNTLFSKLQINQSIIFCNSVNRVELLAKKITELGYSC 395
           DELTLKGITQ+YAFVEERQKVHCLNTLFSKLQINQSIIFCNSVNRVELLAKKITELGYSC
Sbjct: 352 DELTLKGITQYYAFVEERQKVHCLNTLFSKLQINQSIIFCNSVNRVELLAKKITELGYSC 411

Query: 396 FYIHAKMLQDHRNRVFHDFRNGACRNLVCTDLFTRGIDIQAVNVVINFDFPKNSETYLHR 455
           FYIHAKMLQDHRNRVFHDFRNGACRNLVCTDLFTRGIDIQAVNVVINFDFPK SETYLHR
Sbjct: 412 FYIHAKMLQDHRNRVFHDFRNGACRNLVCTDLFTRGIDIQAVNVVINFDFPKTSETYLHR 471

Query: 456 VGRSGRFGHLGLAVNLITYEDRFNLYRIEQELGTEIKQIPPHIDQAIYCR 506
           VGRSGRFGHLGLAVNLITYEDRFNLYRIEQELGTEIK IPP ID A+YC+
Sbjct: 472 VGRSGRFGHLGLAVNLITYEDRFNLYRIEQELGTEIKTIPPQIDLAVYCQ 521

[Close]
BLAST of Carg24940 vs. Swiss-Prot
Match: sp|Q94BV4|RH6_ARATH (DEAD-box ATP-dependent RNA helicase 6 OS=Arabidopsis thaliana OX=3702 GN=RH6 PE=2 SV=2)

HSP 1 Score: 753.1 bits (1943), Expect = 2.1e-216
Identity = 371/432 (85.88%), Postives = 403/432 (93.29%), Query Frame = 0 

Query: 75  KRNQLGGGPADSNVDEVEKTVQSEAV-DSSSQDWKARLKIPPPDTRYKTEDVTATKGNEF 134
           +R QL G P  S +DEVEKTVQSEA+ DS+++DWKA LK+PP D RY+TEDVTATKGNEF
Sbjct: 99  RRAQLPGDP--SYIDEVEKTVQSEAISDSNNEDWKATLKLPPRDNRYQTEDVTATKGNEF 158

Query: 135 EDYFLKRELLMGIYEKGFERPSPIQEESIPIALTGSDILARAKNGTGKTAAFCIPALEKI 194
           EDYFLKR+LL GIYEKGFE+PSPIQEESIPIALTGSDILARAKNGTGKT AFCIP LEKI
Sbjct: 159 EDYFLKRDLLRGIYEKGFEKPSPIQEESIPIALTGSDILARAKNGTGKTGAFCIPTLEKI 218

Query: 195 DQDNNVIQVVILVPTRELALQTSQVCKELGKNLNIQVMVTTGGTSLKDDIMRLYQPVHLL 254
           D +NNVIQ VILVPTRELALQTSQVCKEL K L I+VMVTTGGTSL+DDIMRLYQPVHLL
Sbjct: 219 DPENNVIQAVILVPTRELALQTSQVCKELSKYLKIEVMVTTGGTSLRDDIMRLYQPVHLL 278

Query: 255 VGTPGRILDLAKKGVCVLKDCSMLIMDEADKLLSPEFQPSIEQLIRFLPANRQVLMYSAT 314
           VGTPGRILDLAKKGVCVLKDC+ML+MDEADKLLS EFQPSIE+LI+FLP +RQ+LM+SAT
Sbjct: 279 VGTPGRILDLAKKGVCVLKDCAMLVMDEADKLLSVEFQPSIEELIQFLPESRQILMFSAT 338

Query: 315 FPVTVKDFKDRYLHRPYIINLMDELTLKGITQFYAFVEERQKVHCLNTLFSKLQINQSII 374
           FPVTVK FKDRYL +PYIINLMD+LTL G+TQ+YAFVEERQKVHCLNTLFSKLQINQSII
Sbjct: 339 FPVTVKSFKDRYLKKPYIINLMDQLTLMGVTQYYAFVEERQKVHCLNTLFSKLQINQSII 398

Query: 375 FCNSVNRVELLAKKITELGYSCFYIHAKMLQDHRNRVFHDFRNGACRNLVCTDLFTRGID 434
           FCNSVNRVELLAKKITELGYSCFYIHAKM+QDHRNRVFHDFRNGACRNLVCTDLFTRGID
Sbjct: 399 FCNSVNRVELLAKKITELGYSCFYIHAKMVQDHRNRVFHDFRNGACRNLVCTDLFTRGID 458

Query: 435 IQAVNVVINFDFPKNSETYLHRVGRSGRFGHLGLAVNLITYEDRFNLYRIEQELGTEIKQ 494
           IQAVNVVINFDFP+ SE+YLHRVGRSGRFGHLGLAVNL+TYEDRF +Y+ EQELGTEIK 
Sbjct: 459 IQAVNVVINFDFPRTSESYLHRVGRSGRFGHLGLAVNLVTYEDRFKMYQTEQELGTEIKP 518

Query: 495 IPPHIDQAIYCR 506
           IP  ID+AIYC+
Sbjct: 519 IPSLIDKAIYCQ 528

[Close]
BLAST of Carg24940 vs. TrEMBL
Match: tr|A0A1S3AVG3|A0A1S3AVG3_CUCME (DEAD-box ATP-dependent RNA helicase 8 OS=Cucumis melo OX=3656 GN=LOC103483283 PE=3 SV=1)

HSP 1 Score: 937.6 bits (2422), Expect = 1.2e-269
Identity = 488/505 (96.63%), Postives = 491/505 (97.23%), Query Frame = 0 

Query: 1   MNNRGRYPPGIGAGRGGGVNANPSFQSRPHQQQYVQRNLVPNQQXXXXXXXXXXXXXXXX 60
           MNNRGRYPPGIGAGRGGGVNANPSFQSRPHQQQYVQRNLVPNQ             XXXX
Sbjct: 1   MNNRGRYPPGIGAGRGGGVNANPSFQSRPHQQQYVQRNLVPNQ-------------XXXX 60

Query: 61  XXXXXXXXXXXXXLKRNQLGGGPADSNVDEVEKTVQSEAVDSSSQDWKARLKIPPPDTRY 120
           XXXXXXXXXXXXXLKRNQLGGGPADSNVDEVEKTVQSEAVDSSSQDWKARLKIPPPDTRY
Sbjct: 61  XXXXXXXXXXXXXLKRNQLGGGPADSNVDEVEKTVQSEAVDSSSQDWKARLKIPPPDTRY 120

Query: 121 KTEDVTATKGNEFEDYFLKRELLMGIYEKGFERPSPIQEESIPIALTGSDILARAKNGTG 180
           KTEDVTATKGNEFEDYFLKRELLMGIYEKGFERPSPIQEESIPIALTGSDILARAKNGTG
Sbjct: 121 KTEDVTATKGNEFEDYFLKRELLMGIYEKGFERPSPIQEESIPIALTGSDILARAKNGTG 180

Query: 181 KTAAFCIPALEKIDQDNNVIQVVILVPTRELALQTSQVCKELGKNLNIQVMVTTGGTSLK 240
           KTAAFCIPALEKIDQDNNVIQVVILVPTRELALQTSQVCKELGKNLNIQVMVTTGGTSLK
Sbjct: 181 KTAAFCIPALEKIDQDNNVIQVVILVPTRELALQTSQVCKELGKNLNIQVMVTTGGTSLK 240

Query: 241 DDIMRLYQPVHLLVGTPGRILDLAKKGVCVLKDCSMLIMDEADKLLSPEFQPSIEQLIRF 300
           DDIMRLYQPVHLLVGTPGRILDLAKKGVCVLKDCSMLIMDEADKLLSPEFQPSIE LIRF
Sbjct: 241 DDIMRLYQPVHLLVGTPGRILDLAKKGVCVLKDCSMLIMDEADKLLSPEFQPSIEHLIRF 300

Query: 301 LPANRQVLMYSATFPVTVKDFKDRYLHRPYIINLMDELTLKGITQFYAFVEERQKVHCLN 360
           LPANRQ+LMYSATFPVTVKDFKDRYLH+PY+INLMDELTLKGITQFYAFVEERQKVHCLN
Sbjct: 301 LPANRQILMYSATFPVTVKDFKDRYLHKPYVINLMDELTLKGITQFYAFVEERQKVHCLN 360

Query: 361 TLFSKLQINQSIIFCNSVNRVELLAKKITELGYSCFYIHAKMLQDHRNRVFHDFRNGACR 420
           TLFSKLQINQSIIFCNSVNRVELLAKKITELGYSCFYIHAKMLQDHRNRVFHDFRNGACR
Sbjct: 361 TLFSKLQINQSIIFCNSVNRVELLAKKITELGYSCFYIHAKMLQDHRNRVFHDFRNGACR 420

Query: 421 NLVCTDLFTRGIDIQAVNVVINFDFPKNSETYLHRVGRSGRFGHLGLAVNLITYEDRFNL 480
           NLVCTDLFTRGIDIQAVNVVINFDFPKNSETYLHRVGRSGRFGHLGLAVNLITYEDRFNL
Sbjct: 421 NLVCTDLFTRGIDIQAVNVVINFDFPKNSETYLHRVGRSGRFGHLGLAVNLITYEDRFNL 480

Query: 481 YRIEQELGTEIKQIPPHIDQAIYCR 506
           YRIEQELGTEIKQIPPHIDQAIYCR
Sbjct: 481 YRIEQELGTEIKQIPPHIDQAIYCR 492

[Close]
BLAST of Carg24940 vs. TrEMBL
Match: tr|A0A0A0L495|A0A0A0L495_CUCSA (Dead box ATP-dependent RNA helicase OS=Cucumis sativus OX=3659 GN=Csa_3G122520 PE=3 SV=1)

HSP 1 Score: 936.0 bits (2418), Expect = 3.5e-269
Identity = 487/505 (96.44%), Postives = 490/505 (97.03%), Query Frame = 0 

Query: 1   MNNRGRYPPGIGAGRGGGVNANPSFQSRPHQQQYVQRNLVPNQQXXXXXXXXXXXXXXXX 60
           MNNRGRYPPGIGAGRGGGVNANPSFQSRPHQQQYVQRNLVPNQ             XXXX
Sbjct: 1   MNNRGRYPPGIGAGRGGGVNANPSFQSRPHQQQYVQRNLVPNQ-------------XXXX 60

Query: 61  XXXXXXXXXXXXXLKRNQLGGGPADSNVDEVEKTVQSEAVDSSSQDWKARLKIPPPDTRY 120
           XXXXXXXXXXXXXLKRNQLGGGPADSNVDEVEKTVQSEAVDSSSQDWKARLKIPPPDTRY
Sbjct: 61  XXXXXXXXXXXXXLKRNQLGGGPADSNVDEVEKTVQSEAVDSSSQDWKARLKIPPPDTRY 120

Query: 121 KTEDVTATKGNEFEDYFLKRELLMGIYEKGFERPSPIQEESIPIALTGSDILARAKNGTG 180
           KTEDVTATKGNEFEDYFLKRELLMGIYEKGFERPSPIQEESIPIALTGSDILARAKNGTG
Sbjct: 121 KTEDVTATKGNEFEDYFLKRELLMGIYEKGFERPSPIQEESIPIALTGSDILARAKNGTG 180

Query: 181 KTAAFCIPALEKIDQDNNVIQVVILVPTRELALQTSQVCKELGKNLNIQVMVTTGGTSLK 240
           KTAAFCIPALEKIDQDNNVIQVVILVPTRELALQTSQVCKELGKNLNIQVMVTTGGTSLK
Sbjct: 181 KTAAFCIPALEKIDQDNNVIQVVILVPTRELALQTSQVCKELGKNLNIQVMVTTGGTSLK 240

Query: 241 DDIMRLYQPVHLLVGTPGRILDLAKKGVCVLKDCSMLIMDEADKLLSPEFQPSIEQLIRF 300
           DDIMRLYQPVHLLVGTPGRILDLAKKGVCVLKDCSMLIMDEADKLLSPEFQPSIE LIRF
Sbjct: 241 DDIMRLYQPVHLLVGTPGRILDLAKKGVCVLKDCSMLIMDEADKLLSPEFQPSIEHLIRF 300

Query: 301 LPANRQVLMYSATFPVTVKDFKDRYLHRPYIINLMDELTLKGITQFYAFVEERQKVHCLN 360
           LP NRQ+LMYSATFPVTVKDFKDRYLH+PY+INLMDELTLKGITQFYAFVEERQKVHCLN
Sbjct: 301 LPTNRQILMYSATFPVTVKDFKDRYLHKPYVINLMDELTLKGITQFYAFVEERQKVHCLN 360

Query: 361 TLFSKLQINQSIIFCNSVNRVELLAKKITELGYSCFYIHAKMLQDHRNRVFHDFRNGACR 420
           TLFSKLQINQSIIFCNSVNRVELLAKKITELGYSCFYIHAKMLQDHRNRVFHDFRNGACR
Sbjct: 361 TLFSKLQINQSIIFCNSVNRVELLAKKITELGYSCFYIHAKMLQDHRNRVFHDFRNGACR 420

Query: 421 NLVCTDLFTRGIDIQAVNVVINFDFPKNSETYLHRVGRSGRFGHLGLAVNLITYEDRFNL 480
           NLVCTDLFTRGIDIQAVNVVINFDFPKNSETYLHRVGRSGRFGHLGLAVNLITYEDRFNL
Sbjct: 421 NLVCTDLFTRGIDIQAVNVVINFDFPKNSETYLHRVGRSGRFGHLGLAVNLITYEDRFNL 480

Query: 481 YRIEQELGTEIKQIPPHIDQAIYCR 506
           YRIEQELGTEIKQIPPHIDQAIYCR
Sbjct: 481 YRIEQELGTEIKQIPPHIDQAIYCR 492

[Close]
BLAST of Carg24940 vs. TrEMBL
Match: tr|A0A061DTF1|A0A061DTF1_THECC (RNAhelicase-like 8 isoform 1 OS=Theobroma cacao OX=3641 GN=TCM_005373 PE=3 SV=1)

HSP 1 Score: 894.0 bits (2309), Expect = 1.5e-256
Identity = 478/505 (94.65%), Postives = 487/505 (96.44%), Query Frame = 0 

Query: 1   MNNRGRYPPGIGAGRGGGVNANPSFQSRPHQQQYVQRNLVPNQQXXXXXXXXXXXXXXXX 60
           MN+RGRYPPGIG GRGGGVNANPSFQSRP QQ YVQRNLV N     XXXXXXXXXXXXX
Sbjct: 1   MNSRGRYPPGIGVGRGGGVNANPSFQSRPLQQHYVQRNLVQNH----XXXXXXXXXXXXX 60

Query: 61  XXXXXXXXXXXXXLKRNQLGGGPADSNVDEVEKTVQSEAVDSSSQDWKARLKIPPPDTRY 120
           XXXXXXXXXXXXX +RN L GG   S VDEVEKTVQSEAVDSSSQDWKARLKIPPPDTRY
Sbjct: 61  XXXXXXXXXXXXXXRRNLLPGGNDSSVVDEVEKTVQSEAVDSSSQDWKARLKIPPPDTRY 120

Query: 121 KTEDVTATKGNEFEDYFLKRELLMGIYEKGFERPSPIQEESIPIALTGSDILARAKNGTG 180
           KTEDVTATKGNEFEDYFLKRELLMGIYEKGFERPSPIQEESIPIALTGSDILARAKNGTG
Sbjct: 121 KTEDVTATKGNEFEDYFLKRELLMGIYEKGFERPSPIQEESIPIALTGSDILARAKNGTG 180

Query: 181 KTAAFCIPALEKIDQDNNVIQVVILVPTRELALQTSQVCKELGKNLNIQVMVTTGGTSLK 240
           KTAAFCIPALEKIDQDNNVIQVVILVPTRELALQTSQVCKELGK+L IQVMVTTGGTSLK
Sbjct: 181 KTAAFCIPALEKIDQDNNVIQVVILVPTRELALQTSQVCKELGKHLQIQVMVTTGGTSLK 240

Query: 241 DDIMRLYQPVHLLVGTPGRILDLAKKGVCVLKDCSMLIMDEADKLLSPEFQPSIEQLIRF 300
           DDIMRLYQPVHLLVGTPGRILDLAKKGVC+LKDCSMLIMDEADKLLSPEFQPS+EQLIRF
Sbjct: 241 DDIMRLYQPVHLLVGTPGRILDLAKKGVCILKDCSMLIMDEADKLLSPEFQPSVEQLIRF 300

Query: 301 LPANRQVLMYSATFPVTVKDFKDRYLHRPYIINLMDELTLKGITQFYAFVEERQKVHCLN 360
           L ANRQ+LM+SATFPVTVKDFKDRYLH+PYIINLMDELTLKGITQ+YAFVEERQKVHCLN
Sbjct: 301 LSANRQILMFSATFPVTVKDFKDRYLHKPYIINLMDELTLKGITQYYAFVEERQKVHCLN 360

Query: 361 TLFSKLQINQSIIFCNSVNRVELLAKKITELGYSCFYIHAKMLQDHRNRVFHDFRNGACR 420
           TLFSKLQINQSIIFCNSVNRVELLAKKITELGYSCFYIHAKMLQDHRNRVFHDFRNGACR
Sbjct: 361 TLFSKLQINQSIIFCNSVNRVELLAKKITELGYSCFYIHAKMLQDHRNRVFHDFRNGACR 420

Query: 421 NLVCTDLFTRGIDIQAVNVVINFDFPKNSETYLHRVGRSGRFGHLGLAVNLITYEDRFNL 480
           NLVCTDLFTRGIDIQAVNVVINFDFPKNSETYLHRVGRSGRFGHLGLAVNLITYEDRFNL
Sbjct: 421 NLVCTDLFTRGIDIQAVNVVINFDFPKNSETYLHRVGRSGRFGHLGLAVNLITYEDRFNL 480

Query: 481 YRIEQELGTEIKQIPPHIDQAIYCR 506
           YRIEQELGTEIKQIPPHIDQAIYCR
Sbjct: 481 YRIEQELGTEIKQIPPHIDQAIYCR 501

[Close]
BLAST of Carg24940 vs. TrEMBL
Match: tr|A0A1U8PAN1|A0A1U8PAN1_GOSHI (DEAD-box ATP-dependent RNA helicase 8-like OS=Gossypium hirsutum OX=3635 GN=LOC107957248 PE=3 SV=1)

HSP 1 Score: 887.5 bits (2292), Expect = 1.4e-254
Identity = 473/505 (93.66%), Postives = 484/505 (95.84%), Query Frame = 0 

Query: 1   MNNRGRYPPGIGAGRGGGVNANPSFQSRPHQQQYVQRNLVPNQQXXXXXXXXXXXXXXXX 60
           MN+RGRYPPGIG GRGGGVNANPSFQSRP QQ YVQRNL         XXXXXXXXXXXX
Sbjct: 1   MNSRGRYPPGIGVGRGGGVNANPSFQSRPSQQHYVQRNL---------XXXXXXXXXXXX 60

Query: 61  XXXXXXXXXXXXXLKRNQLGGGPADSNVDEVEKTVQSEAVDSSSQDWKARLKIPPPDTRY 120
           XXXXXXXXXXXXX +R+QL GG   S VDEVEKTVQSEAVDSSSQDWKARL +PPPDTRY
Sbjct: 61  XXXXXXXXXXXXXXRRDQLPGGNDSSVVDEVEKTVQSEAVDSSSQDWKARLNVPPPDTRY 120

Query: 121 KTEDVTATKGNEFEDYFLKRELLMGIYEKGFERPSPIQEESIPIALTGSDILARAKNGTG 180
           KTEDVTATKGNEFEDYFLKRELLMGIYEKGFERPSPIQEESIPIALTGSDILARAKNGTG
Sbjct: 121 KTEDVTATKGNEFEDYFLKRELLMGIYEKGFERPSPIQEESIPIALTGSDILARAKNGTG 180

Query: 181 KTAAFCIPALEKIDQDNNVIQVVILVPTRELALQTSQVCKELGKNLNIQVMVTTGGTSLK 240
           KTAAFCIPALEKIDQDNNVIQVVILVPTRELALQTSQVCKELGK+L IQVMVTTGGTSLK
Sbjct: 181 KTAAFCIPALEKIDQDNNVIQVVILVPTRELALQTSQVCKELGKHLQIQVMVTTGGTSLK 240

Query: 241 DDIMRLYQPVHLLVGTPGRILDLAKKGVCVLKDCSMLIMDEADKLLSPEFQPSIEQLIRF 300
           DDIMRLYQPVHLLVGTPGRILDLAKKGVC+LKDCSMLIMDEADKLLSPEFQPSIEQLIRF
Sbjct: 241 DDIMRLYQPVHLLVGTPGRILDLAKKGVCILKDCSMLIMDEADKLLSPEFQPSIEQLIRF 300

Query: 301 LPANRQVLMYSATFPVTVKDFKDRYLHRPYIINLMDELTLKGITQFYAFVEERQKVHCLN 360
           LPANRQ+LM+SATFPVTVKDFKD+YL +PYIINLMDELTLKGITQ+YAFVEERQKVHCLN
Sbjct: 301 LPANRQILMFSATFPVTVKDFKDKYLKKPYIINLMDELTLKGITQYYAFVEERQKVHCLN 360

Query: 361 TLFSKLQINQSIIFCNSVNRVELLAKKITELGYSCFYIHAKMLQDHRNRVFHDFRNGACR 420
           TLFSKLQINQSIIFCNSVNRVELLAKKITELGYSCFYIHAKMLQDHRNRVFHDFRNGACR
Sbjct: 361 TLFSKLQINQSIIFCNSVNRVELLAKKITELGYSCFYIHAKMLQDHRNRVFHDFRNGACR 420

Query: 421 NLVCTDLFTRGIDIQAVNVVINFDFPKNSETYLHRVGRSGRFGHLGLAVNLITYEDRFNL 480
           NLVCTDLFTRGIDIQAVNVVINFDFPKNSETYLHRVGRSGRFGHLGLAVNLITYEDRFNL
Sbjct: 421 NLVCTDLFTRGIDIQAVNVVINFDFPKNSETYLHRVGRSGRFGHLGLAVNLITYEDRFNL 480

Query: 481 YRIEQELGTEIKQIPPHIDQAIYCR 506
           YRIEQELGTEIKQIPPHIDQAIYCR
Sbjct: 481 YRIEQELGTEIKQIPPHIDQAIYCR 496

[Close]
BLAST of Carg24940 vs. TrEMBL
Match: tr|A0A0B0NJ32|A0A0B0NJ32_GOSAR (DEAD-box ATP-dependent RNA helicase 8-like protein OS=Gossypium arboreum OX=29729 GN=F383_18451 PE=3 SV=1)

HSP 1 Score: 886.7 bits (2290), Expect = 2.4e-254
Identity = 470/506 (92.89%), Postives = 479/506 (94.66%), Query Frame = 0 

Query: 1   MNNRGRY-PPGIGAGRGGGVNANPSFQSRPHQQQYVQRNLVPNQQXXXXXXXXXXXXXXX 60
           MN+RGRY PPGIG GRGGGVNANPSFQSRP QQ YVQRNLV             XXXXXX
Sbjct: 1   MNSRGRYPPPGIGVGRGGGVNANPSFQSRPSQQHYVQRNLV-------------XXXXXX 60

Query: 61  XXXXXXXXXXXXXXLKRNQLGGGPADSNVDEVEKTVQSEAVDSSSQDWKARLKIPPPDTR 120
           XXXXXXXXXXXXX L+RN L GG   S +DEVEKTVQSEAVDSSSQDWKARLKIPP DTR
Sbjct: 61  XXXXXXXXXXXXXWLRRNHLPGGNDSSVIDEVEKTVQSEAVDSSSQDWKARLKIPPADTR 120

Query: 121 YKTEDVTATKGNEFEDYFLKRELLMGIYEKGFERPSPIQEESIPIALTGSDILARAKNGT 180
           YKTEDVTATKGNEFEDYFLKRELLMGIYEKGFERPSPIQEESIPIALTGSDILARAKNGT
Sbjct: 121 YKTEDVTATKGNEFEDYFLKRELLMGIYEKGFERPSPIQEESIPIALTGSDILARAKNGT 180

Query: 181 GKTAAFCIPALEKIDQDNNVIQVVILVPTRELALQTSQVCKELGKNLNIQVMVTTGGTSL 240
           GKTAAFCIPALEKIDQDNNVIQVVILVPTRELALQTSQVCKELGK+L IQVMVTTGGTSL
Sbjct: 181 GKTAAFCIPALEKIDQDNNVIQVVILVPTRELALQTSQVCKELGKHLQIQVMVTTGGTSL 240

Query: 241 KDDIMRLYQPVHLLVGTPGRILDLAKKGVCVLKDCSMLIMDEADKLLSPEFQPSIEQLIR 300
           KDDIMRLYQPVHLLVGTPGRILDLAKKGVC+LKDCSMLIMDEADKLLSPEFQPSIEQLIR
Sbjct: 241 KDDIMRLYQPVHLLVGTPGRILDLAKKGVCILKDCSMLIMDEADKLLSPEFQPSIEQLIR 300

Query: 301 FLPANRQVLMYSATFPVTVKDFKDRYLHRPYIINLMDELTLKGITQFYAFVEERQKVHCL 360
           FLPANRQ+LM+SATFPVTVKDFKDRYL +PYIINLMDELTLKGITQ+YAFVEERQKVHCL
Sbjct: 301 FLPANRQILMFSATFPVTVKDFKDRYLKKPYIINLMDELTLKGITQYYAFVEERQKVHCL 360

Query: 361 NTLFSKLQINQSIIFCNSVNRVELLAKKITELGYSCFYIHAKMLQDHRNRVFHDFRNGAC 420
           NTLFSKLQINQSIIFCNSVNRVELLAKKITELGYSCFYIHAKMLQDHRNRVFHDFRNGAC
Sbjct: 361 NTLFSKLQINQSIIFCNSVNRVELLAKKITELGYSCFYIHAKMLQDHRNRVFHDFRNGAC 420

Query: 421 RNLVCTDLFTRGIDIQAVNVVINFDFPKNSETYLHRVGRSGRFGHLGLAVNLITYEDRFN 480
           RNLVCTDLFTRGIDIQAVNVVINFDFPKNSETYLHRVGRSGRFGHLGLAVNLITYEDRFN
Sbjct: 421 RNLVCTDLFTRGIDIQAVNVVINFDFPKNSETYLHRVGRSGRFGHLGLAVNLITYEDRFN 480

Query: 481 LYRIEQELGTEIKQIPPHIDQAIYCR 506
           LYRIEQELGTEIKQIPPHIDQAIYCR
Sbjct: 481 LYRIEQELGTEIKQIPPHIDQAIYCR 493

The following BLAST results are available for this feature:
BLAST of Carg24940 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_022940370.11.2e-27099.60DEAD-box ATP-dependent RNA helicase 8-like [Cucurbita moschata][more]
XP_022974606.11.6e-27099.02DEAD-box ATP-dependent RNA helicase 8-like [Cucurbita maxima][more]
XP_008438061.11.8e-26996.63PREDICTED: DEAD-box ATP-dependent RNA helicase 8 [Cucumis melo] >XP_008438062.1 ... [more]
XP_004133869.15.2e-26996.44PREDICTED: DEAD-box ATP-dependent RNA helicase 8 [Cucumis sativus] >XP_011650758... [more]
KGN56528.15.2e-26996.44Dead box ATP-dependent RNA helicase [Cucumis sativus][more]
BLAST of Carg24940 vs. TAIR10
Match NameE-valueIdentityDescription
AT4G00660.26.9e-23987.35RNAhelicase-like 8[more]
AT2G45810.11.1e-21785.88DEA(D/H)-box RNA helicase family protein[more]
AT3G61240.12.5e-21778.82DEA(D/H)-box RNA helicase family protein[more]
AT3G19760.11.6e-7839.25eukaryotic initiation factor 4A-III[more]
AT1G72730.19.1e-7439.19DEA(D/H)-box RNA helicase family protein[more]
BLAST of Carg24940 vs. Swiss-Prot
Match NameE-valueIdentityDescription
sp|Q8RXK6|RH8_ARATH1.2e-23787.35DEAD-box ATP-dependent RNA helicase 8 OS=Arabidopsis thaliana OX=3702 GN=RH8 PE=... [more]
sp|Q7XMK8|RH6_ORYSJ4.6e-22488.43DEAD-box ATP-dependent RNA helicase 6 OS=Oryza sativa subsp. japonica OX=39947 G... [more]
sp|Q6H7S2|RH8_ORYSJ3.9e-22383.27DEAD-box ATP-dependent RNA helicase 8 OS=Oryza sativa subsp. japonica OX=39947 G... [more]
sp|Q109G2|RH12_ORYSJ1.5e-22292.20DEAD-box ATP-dependent RNA helicase 12 OS=Oryza sativa subsp. japonica OX=39947 ... [more]
sp|Q94BV4|RH6_ARATH2.1e-21685.88DEAD-box ATP-dependent RNA helicase 6 OS=Arabidopsis thaliana OX=3702 GN=RH6 PE=... [more]
BLAST of Carg24940 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A1S3AVG3|A0A1S3AVG3_CUCME1.2e-26996.63DEAD-box ATP-dependent RNA helicase 8 OS=Cucumis melo OX=3656 GN=LOC103483283 PE... [more]
tr|A0A0A0L495|A0A0A0L495_CUCSA3.5e-26996.44Dead box ATP-dependent RNA helicase OS=Cucumis sativus OX=3659 GN=Csa_3G122520 P... [more]
tr|A0A061DTF1|A0A061DTF1_THECC1.5e-25694.65RNAhelicase-like 8 isoform 1 OS=Theobroma cacao OX=3641 GN=TCM_005373 PE=3 SV=1[more]
tr|A0A1U8PAN1|A0A1U8PAN1_GOSHI1.4e-25493.66DEAD-box ATP-dependent RNA helicase 8-like OS=Gossypium hirsutum OX=3635 GN=LOC1... [more]
tr|A0A0B0NJ32|A0A0B0NJ32_GOSAR2.4e-25492.89DEAD-box ATP-dependent RNA helicase 8-like protein OS=Gossypium arboreum OX=2972... [more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0003676nucleic acid binding
GO:0005524ATP binding
Vocabulary: INTERPRO
TermDefinition
IPR027417P-loop_NTPase
IPR014014RNA_helicase_DEAD_Q_motif
IPR000629RNA-helicase_DEAD-box_CS
IPR011545DEAD/DEAH_box_helicase_dom
IPR001650Helicase_C
IPR014001Helicase_ATP-bd
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0005524 ATP binding
molecular_function GO:0003676 nucleic acid binding
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Carg24940-RACarg24940-RAmRNA


InterPro
Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR014001Helicase superfamily 1/2, ATP-binding domainSMARTSM00487ultradead3coord: 150..346
e-value: 2.5E-56
score: 203.2
IPR014001Helicase superfamily 1/2, ATP-binding domainPROSITEPS51192HELICASE_ATP_BIND_1coord: 162..332
score: 28.592
IPR001650Helicase, C-terminalSMARTSM00490helicmild6coord: 382..463
e-value: 1.3E-30
score: 117.7
IPR001650Helicase, C-terminalPFAMPF00271Helicase_Ccoord: 357..463
e-value: 7.0E-28
score: 97.1
IPR001650Helicase, C-terminalPROSITEPS51194HELICASE_CTERcoord: 342..502
score: 24.133
IPR001650Helicase, C-terminalCDDcd00079HELICccoord: 343..471
e-value: 1.91409E-39
score: 139.295
NoneNo IPR availableGENE3DG3DSA:3.40.50.300coord: 89..335
e-value: 2.1E-66
score: 225.7
NoneNo IPR availableGENE3DG3DSA:3.40.50.300coord: 336..505
e-value: 3.0E-54
score: 184.8
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..122
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 20..77
NoneNo IPR availablePANTHERPTHR24031RNA HELICASEcoord: 38..504
NoneNo IPR availablePANTHERPTHR24031:SF555DEAD-BOX ATP-DEPENDENT RNA HELICASE 8coord: 38..504
NoneNo IPR availableCDDcd00268DEADccoord: 133..333
e-value: 3.74277E-95
score: 288.999
IPR011545DEAD/DEAH box helicase domainPFAMPF00270DEADcoord: 156..320
e-value: 7.0E-44
score: 149.6
IPR000629ATP-dependent RNA helicase DEAD-box, conserved sitePROSITEPS00039DEAD_ATP_HELICASEcoord: 278..286
IPR014014RNA helicase, DEAD-box type, Q motifPROSITEPS51195Q_MOTIFcoord: 131..159
score: 10.097
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILYSSF52540P-loop containing nucleoside triphosphate hydrolasescoord: 201..485